Pregenerated sensors for TSPYL4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039485Ensembl transcript IDs: ENSMUST00000047935.8
Found 99 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGCCACGTGAGACTACAGATCCTGCCCAGCAGCTAATTGAGCCATaGGAACTGGTACAGCAGGGGGTATCTGTGTGCTGCCTAGGAACT | + |
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Preference number: 1 (lower is better) Translates to: LPRETTDPAQQLIEP*ELVQQGVSVCCLGT Trigger: AGTTCCTAGGCAGCACACAGATACCCCCTGCTGTACCAGTTCCCATGGCTCAATTAGCTGCTGGGCAGGATCTGTAGTCTCACGTGGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR CCA 90 bp | GGGCTCAGAACTAACCACTGGAAGGGAGCCACTTCAGCTTTGCTTTaGGCACTGCCACGTGAGACTACAGATCCTGCCCAGCAGCTAATT | + |
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Preference number: 1 (lower is better) Translates to: GLRTNHWKGATSALL*ALPRETTDPAQQLI Trigger: AATTAGCTGCTGGGCAGGATCTGTAGTCTCACGTGGCAGTGCCCAAAGCAAAGCTGAAGTGGCTCCCTTCCAGTGGTTAGTTCTGAGCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR GCA 90 bp | CATCCCCACATCCCTGAGAAGAGGCTTGGGGTCTCCCTCCCACAATaGACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACATGG | + |
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Preference number: 1 (lower is better) Translates to: HPHIPEKRLGVSLPQ*TLQPASFFVRMETW Trigger: CCATGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGCATTGTGGGAGGGAGACCCCAAGCCTCTTCTCAGGGATGTGGGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR TCA 90 bp | CACCTAGTAGAATGGAGGGAAGAGTGGAGGTGGTCTCCCTTGCTATaGGAAGGGTGGAATAGTCAGGGCAGTGAGAGATTTGGAGTCTAC | + |
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Preference number: 1 (lower is better) Translates to: HLVEWREEWRWSPLL*EGWNSQGSERFGVY Trigger: GTAGACTCCAAATCTCTCACTGCCCTGACTATTCCACCCTTCTCATAGCAAGGGAGACCACCTCCACTCTTCCCTCCATTCTACTAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR GCA 90 bp | AGCTTTGGAGAAGCTTTCAACAAGGTCTTTCAATCAGAAAGGGAATaGCTGAGGGCTGCAGCGGCAGAAGCCACAACAGCGCTGTTGCAA | + |
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Preference number: 1 (lower is better) Translates to: SFGEAFNKVFQSERE*LRAAAAEATTALLQ Trigger: TTGCAACAGCGCTGTTGTGGCTTCTGCCGCTGCAGCCCTCAGGCATTCCCTTTCTGATTGAAAGACCTTGTTGAAAGCTTCTCCAAAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR TCA 90 bp | CTTCCTTCTTTGTTAGGATGGAAACATGGAAGGACATTCAAAACCTaGCAGGTAAGGGCCAAGATCAGGCAAACAACAAAGATGTCGCAC | + |
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Preference number: 1 (lower is better) Translates to: LPSLLGWKHGRTFKT*QVRAKIRQTTKMSH Trigger: GTGCGACATCTTTGTTGTTTGCCTGATCTTGGCCCTTACCTGTCAGGTTTTGAATGTCCTTCCATGTTTCCATCCTAACAAAGAAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR CCA 90 bp | TTCACAGTACATAGATATCGGGAACACAGCAGAAAGTATGAAGCCTaGCTAGTTCTTGGTAAGAATGTGTCAAGCTTTCTTGTGGCAGAG | + |
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Preference number: 1 (lower is better) Translates to: FTVHRYREHSRKYEA*LVLGKNVSSFLVAE Trigger: CTCTGCCACAAGAAAGCTTGACACATTCTTACCAAGAACTAGCCAGGCTTCATACTTTCTGCTGTGTTCCCGATATCTATGTACTGTGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR TCA 90 bp | ACAGTTTTCAAAAAGTCTTCAGACTTCAGAGATCATTGTGCGGATTaGACTTCTAAGAATACAGCTATACATGAAGAGACACCAGAACAA | + |
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Preference number: 1 (lower is better) Translates to: TVFKKSSDFRDHCAD*TSKNTAIHEETPEQ Trigger: TTGTTCTGGTGTCTCTTCATGTATAGCTGTATTCTTAGAAGTTCAATCCGCACAATGATCTCTGAAGTCTGAAGACTTTTTGAAAACTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR CCA 90 bp | ACATTCCTCGCCTGTTACTTCACTCATACCCACCAGCCACCTGCTTGTTGTAGACCTGGAATGTCCTGTTaGGCTAATGGCTGGGTTGGG | + |
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Preference number: 2 (lower is better) Translates to: TFLACYFTHTHQPPACCRPGMSC*ANGWVG Trigger: CCCAACCCAGCCATTAGCCCAACAGGACATTCCAGG...TCTACAACAAGCAGGTGGCTGGTGGGTATGAGTGAAGTAACAGGCGAGGAATGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR CAA 90 bp | ACTTGGGCCTGTGCAAAGCTCAACCAGGAGAGAACTAGTGGGCAATaGCACAAGCTTCCATACTCACCAGTAGCTGATCACAATGCACAG | + |
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Preference number: 2 (lower is better) Translates to: TWACAKLNQERTSGQ*HKLPYSPVADHNAQ Trigger: CTGTGCATTGTGATCAGCTACTGGTGAGTATGGAAGCTTGTGCAATTGCCCACTAGTTCTCTCCTGGTTGAGCTTTGCACAGGCCCAAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR TCA 90 bp | AAGAGCCAAAGAGAAAAAGGTATAGCAAGGCCTGTGGGCCACAAACAATTTCTATGCTGCTGGCCAAGCTaGGGAGGTGGTAAGGACTCC | + |
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Preference number: 2 (lower is better) Translates to: KSQREKGIARPVGHKQFLCCWPS*GGGKDS Trigger: GGAGTCCTTACCACCTCCTCAGCTTGGCCAGCAGCA...TAGAAATTGTTTGTGGCCCACAGGCCTTGCTATACCTTTTTCTCTTTGGCTCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR CCA 90 bp | TCCCTCCCACAATGCACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACAGAATGGAGGGAAGAGTaGAGGTGGTCTCCCTTGCTA | + |
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Preference number: 2 (lower is better) Translates to: SLPQCTLQPASFFVRMETEWREE*RWSPLL Trigger: TAGCAAGGGAGACCACCTCCACTCTTCCCTCCATTC...TGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGCATTGTGGGAGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR CAA 90 bp | GTGCATTCATTCACAGACTGCTCAGGGCAGGCACAGGGTCTGTCATaGAGACTCTTCTTTCTCTTCTCTCAGATTCCCAAACTAGAGCTT | + |
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Preference number: 2 (lower is better) Translates to: VHSFTDCSGQAQGLS*RLFFLFSQIPKLEL Trigger: AAGCTCTAGTTTGGGAATCTGAGAGAAGAGAAAGAAGAGTCTCAATGACAGACCCTGTGCCTGCCCTGAGCAGTCTGTGAATGAATGCAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR TCA 90 bp | AATAGTCAGGGCAGTGAGAGATTTGGAGTCTACTTTACAGTACCTTTCCCAGCCGGCATAGAAGCAGTTTaGAGGCCATGCACTTGGAAC | + |
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Preference number: 2 (lower is better) Translates to: NSQGSERFGVYFTVPFPAGIEAV*RPCTWN Trigger: GTTCCAAGTGCATGGCCTTCAAACTGCTTCTATGCC...GGCTGGGAAAGGTACTGTAAAGTAGACTCCAAATCTCTCACTGCCCTGACTATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR GCA 90 bp | TTCTTCACAGTACATAGATATCGGGAACACAGCAGAAAGTATGAAGCCTGGCTAAAGCAGACAGAAGGCTaGATGCTGCTGGCCAAGCTG | + |
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Preference number: 2 (lower is better) Translates to: FFTVHRYREHSRKYEAWLKQTEG*MLLAKL Trigger: CAGCTTGGCCAGCAGCATGCAGCCTTCTGTCTGCTT...TAGCCAGGCTTCATACTTTCTGCTGTGTTCCCGATATCTATGTACTGTGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR GCA 90 bp | GCACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACATGGAAGGACATTCGGCCCACAAAAGAACTaGTGTCCTTTAGAAACGTGG | + |
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Preference number: 2 (lower is better) Translates to: ALYSLLPSLLGWKHGRTFGPQKN*CPLETW Trigger: CCACGTTTCTAAAGGACAGCAGTTCTTTTGTGGGCC...GAATGTCCTTCCATGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR CCA 90 bp | TTTGGAGAAGCTTTCAACAAGGTCTTTCAATCAGAAAGGGAATGCCTGAGGGCTACTTCAGCTTTGCTTTaGGCACTGCCACGTGAGACT | + |
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Preference number: 2 (lower is better) Translates to: FGEAFNKVFQSERECLRATSALL*ALPRET Trigger: AGTCTCACGTGGCAGTGCCCAAAGCAAAGCTGAAGT...AGCCCTCAGGCATTCCCTTTCTGATTGAAAGACCTTGTTGAAAGCTTCTCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR GCA 90 bp | TTTGGAGAAGCTTTCAACAAGGTCTTTCAATCAGAAAGGGAATGCCTGAGGGCTGAAACGTGGGCTAGGTaGATTCATTCACAGACTGCT | + |
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Preference number: 2 (lower is better) Translates to: FGEAFNKVFQSERECLRAETWAR*IHSQTA Trigger: AGCAGTCTGTGAATGAATGCACCTAGCCCACGTTTC...AGCCCTCAGGCATTCCCTTTCTGATTGAAAGACCTTGTTGAAAGCTTCTCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR TCA 90 bp | TGGCTAGTTCTTGGTAAGAATGTGTCAAGCTTTCTTGTGGCAGAGAACCACTTAACAGACTACAGCACGTaGCTTGGCATAGAAGCAGTT | + |
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Preference number: 2 (lower is better) Translates to: WLVLGKNVSSFLVAENHLTDYST*LGIEAV Trigger: AACTGCTTCTATGCCAAGTCACGTGCTGTAGTCTGT...TAAGTGGTTCTCTGCCACAAGAAAGCTTGACACATTCTTACCAAGAACTAGCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR CCA 90 bp | GCACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACATGGAAGGACATTCAGAAAGTATGAAGCCTaGCTAGTTCTTGGTAAGAAT | + |
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Preference number: 2 (lower is better) Translates to: ALYSLLPSLLGWKHGRTFRKYEA*LVLGKN Trigger: ATTCTTACCAAGAACTAGCCAGGCTTCATACTTTCT...GAATGTCCTTCCATGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR CCA 90 bp | CAGTTTTCAAAAAGTCTTCAGACTTCAGAGATCATTGTGCGGATTGAACTTCTATGTTGGGCTAATGGCTaGGTTGGGGTACAGTTCCAT | + |
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Preference number: 2 (lower is better) Translates to: QFSKSLQTSEIIVRIELLCWANG*VGVQFH Trigger: ATGGAACTGTACCCCAACCCAGCCATTAGCCCAACA...TAGAAGTTCAATCCGCACAATGATCTCTGAAGTCTGAAGACTTTTTGAAAACTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR TCA 90 bp | CAGTTTTCAAAAAGTCTTCAGACTTCAGAGATCATTGTGCGGATTGAACTTCTAACAAGACCAATGAGGTaGCAGAAAACATTCCTCGCC | + |
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Preference number: 2 (lower is better) Translates to: QFSKSLQTSEIIVRIELLTRPMR*QKTFLA Trigger: GGCGAGGAATGTTTTCTGTCACCTCATTGGTCTTGT...TAGAAGTTCAATCCGCACAATGATCTCTGAAGTCTGAAGACTTTTTGAAAACTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR TCA 90 bp | CGGATTGAACTTCTAAGAATACAGCTATACATGAAGAGACACCAGAACAAGTTAAGGACATTCAAAACCTaGCAGGTAAGGGCCAAGATC | + |
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Preference number: 2 (lower is better) Translates to: RIELLRIQLYMKRHQNKLRTFKT*QVRAKI Trigger: GATCTTGGCCCTTACCTGTCAGGTTTTGAATGTCCT...TAACTTGTTCTGGTGTCTCTTCATGTATAGCTGTATTCTTAGAAGTTCAATCCG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR GCA 90 bp | CGGATTGAACTTCTAAGAATACAGCTATACATGAAGAGACACCAGAACAAGTTAGGTACAGTTCCATCTTaGAGTGGTGAAACTCACGGT | + |
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Preference number: 2 (lower is better) Translates to: RIELLRIQLYMKRHQNKLGTVPS*SGETHG Trigger: ACCGTGAGTTTCACCACTGCAAGATGGAACTGTACC...TAACTTGTTCTGGTGTCTCTTCATGTATAGCTGTATTCTTAGAAGTTCAATCCG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR CCA 72 bp | GAGACTACAGATCCTGCCCAGCAGCTAATTGAGCCATaGGAACTGGTACAGCAGGGGGTATCTGTGTGCTGC | + |
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Preference number: 3 (lower is better) Translates to: ETTDPAQQLIEP*ELVQQGVSVCC Trigger: GCAGCACACAGATACCCCCTGCTGTACCAGTTCCCATGGCTCAATTAGCTGCTGGGCAGGATCTGTAGTCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR CCA 72 bp | GCGGCAGAAGCCACAACAGCGCTGTTGCAAATTCAATaGAGCATGTCCTGCAAATCCAGACCCCTCACATCC | + |
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Preference number: 3 (lower is better) Translates to: AAEATTALLQIQ*SMSCKSRPLTS Trigger: GGATGTGAGGGGTCTGGATTTGCAGGACATGCTCCATTGAATTTGCAACAGCGCTGTTGTGGCTTCTGCCGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR GCA 72 bp | TCAGAACTAACCACTGGAAGGGAGCCACTTCAGCTTTaGTTTGGGCACTGCCACGTGAGACTACAGATCCTG | + |
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Preference number: 3 (lower is better) Translates to: SELTTGREPLQL*FGHCHVRLQIL Trigger: CAGGATCTGTAGTCTCACGTGGCAGTGCCCAAAGCAAAGCTGAAGTGGCTCCCTTCCAGTGGTTAGTTCTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR GCA 72 bp | ATCCCTGAGAAGAGGCTTGGGGTCTCCCTCCCACAATaGACTCTACAGCCTGCTTCCTTCTTTGTTAGGATG | + |
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Preference number: 3 (lower is better) Translates to: IPEKRLGVSLPQ*TLQPASFFVRM Trigger: CATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGCATTGTGGGAGGGAGACCCCAAGCCTCTTCTCAGGGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR GCA 72 bp | GAAGCTTTCAACAAGGTCTTTCAATCAGAAAGGGAATaGCTGAGGGCTGCAGCGGCAGAAGCCACAACAGCG | + |
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Preference number: 3 (lower is better) Translates to: EAFNKVFQSERE*LRAAAAEATTA Trigger: CGCTGTTGTGGCTTCTGCCGCTGCAGCCCTCAGGCATTCCCTTTCTGATTGAAAGACCTTGTTGAAAGCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR GCA 72 bp | CAAAAGAACTGCTGTCCTTTAGAAACGTGGGCTAGGTaGATTCATTCACAGACTGCTCAGGGCAGGCACAGG | + |
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Preference number: 3 (lower is better) Translates to: QKNCCPLETWAR*IHSQTAQGRHR Trigger: CCTGTGCCTGCCCTGAGCAGTCTGTGAATGAATGCACCTAGCCCACGTTTCTAAAGGACAGCAGTTCTTTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR TCA 72 bp | TGGGCAATTGCACAAGCTTCCATACTCACCAGTAGCTaGTCACAATGCACAGCAACCAACGGTACAAGACCA | + |
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Preference number: 3 (lower is better) Translates to: WAIAQASILTSS*SQCTATNGTRP Trigger: TGGTCTTGTACCGTTGGTTGCTGTGCATTGTGATCAGCTACTGGTGAGTATGGAAGCTTGTGCAATTGCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR CAA 90 bp | CAGTTTTCAAAAAGTCTTCAGACTTCAGAGATCATTGTGCGGATTGAACTTCTAGAGGAGTGCACACCATaGATCTCCCCAGGCAAGGCT | + |
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Preference number: 3 (lower is better) Translates to: QFSKSLQTSEIIVRIELLEECTP*ISPGKA Trigger: AGCCTTGCCTGGGGAGATCAATGGTGTGCACTCCTC...TAGAAGTTCAATCCGCACAATGATCTCTGAAGTCTGAAGACTTTTTGAAAACTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR TCA 72 bp | CAATGCACAGCAACCAACGGTACAAGACCAATGAGGTaGCAGAAAACATTCCTCGCCTGTTACTTCACTCAT | + |
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Preference number: 3 (lower is better) Translates to: QCTATNGTRPMR*QKTFLACYFTH Trigger: ATGAGTGAAGTAACAGGCGAGGAATGTTTTCTGTCACCTCATTGGTCTTGTACCGTTGGTTGCTGTGCATTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR TCA 72 bp | GATCACAATGCACAGCAACCAACGGTACAAGACCAATaGGGTGACAGAAAACATTCCTCGCCTGTTACTTCA | + |
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Preference number: 3 (lower is better) Translates to: DHNAQQPTVQDQ*GDRKHSSPVTS Trigger: TGAAGTAACAGGCGAGGAATGTTTTCTGTCACCTCATTGGTCTTGTACCGTTGGTTGCTGTGCATTGTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR TCA 72 bp | TTGTTAGGATGGAAACATGGAAGGACATTCAAAACCTaGCAGGTAAGGGCCAAGATCAGGCAAACAACAAAG | + |
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Preference number: 3 (lower is better) Translates to: LLGWKHGRTFKT*QVRAKIRQTTK Trigger: CTTTGTTGTTTGCCTGATCTTGGCCCTTACCTGTCAGGTTTTGAATGTCCTTCCATGTTTCCATCCTAACAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR CCA 72 bp | CATAGATATCGGGAACACAGCAGAAAGTATGAAGCCTaGCTAGTTCTTGGTAAGAATGTGTCAAGCTTTCTT | + |
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Preference number: 3 (lower is better) Translates to: HRYREHSRKYEA*LVLGKNVSSFL Trigger: AAGAAAGCTTGACACATTCTTACCAAGAACTAGCCAGGCTTCATACTTTCTGCTGTGTTCCCGATATCTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR TCA 72 bp | AGTAGTGAGTGTTCCCAGGAGTCTTCATACTGCAACTaGCAGAAATTCAAATGTTTGCACTTGTTCTCAATG | + |
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Preference number: 3 (lower is better) Translates to: SSECSQESSYCN*QKFKCLHLFSM Trigger: CATTGAGAACAAGTGCAAACATTTGAATTTCTGTCAGTTGCAGTATGAAGACTCCTGGGAACACTCACTACT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR CAA 90 bp | CAAACAATTTCTAACTACCCAAACCTAGGCAACTTTGACTTAACCAGAGTGGGTTTGAAGGCCATGCACTaGGAACACCATTATATATAT | + |
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Preference number: 3 (lower is better) Translates to: QTISNYPNLGNFDLTRVGLKAMH*EHHYIY Trigger: ATATATATAATGGTGTTCCAAGTGCATGGCCTTCAA...ACCCACTCTGGTTAAGTCAAAGTTGCCTAGGTTTGGGTAGTTAGAAATTGTTTG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR-3UTR CAA 90 bp | CAGTTTTCAAAAAGTCTTCAGACTTCAGAGATCATTGTGCGGATTGAACTTCTAAAGAAGAGCAAAGACTaGAAAGCCACAATCTTGAAA | + |
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Preference number: 3 (lower is better) Translates to: QFSKSLQTSEIIVRIELLKKSKD*KATILK Trigger: TTTCAAGATTGTGGCTTTCAAGTCTTTGCTCTTCTT...TAGAAGTTCAATCCGCACAATGATCTCTGAAGTCTGAAGACTTTTTGAAAACTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR TCA 72 bp | AAAAAGTCTTCAGACTTCAGAGATCATTGTGCGGATTaGACTTCTAAGAATACAGCTATACATGAAGAGACA | + |
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Preference number: 3 (lower is better) Translates to: KKSSDFRDHCAD*TSKNTAIHEET Trigger: TGTCTCTTCATGTATAGCTGTATTCTTAGAAGTTCAATCCGCACAATGATCTCTGAAGTCTGAAGACTTTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR TCA 90 bp | CAAACAATTTCTAACTACCCAAACCTAGGCAACTTTGACTTAACCAGAGTGGGTGGCCCCGGCATCTGCTaGGACCCCAGGCCCACCGCA | + |
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Preference number: 4 (lower is better) Translates to: QTISNYPNLGNFDLTRVGGPGIC*DPRPTA Trigger: TGCGGTGGGCCTGGGGTCTCAGCAGATGCCGGGGCC...ACCCACTCTGGTTAAGTCAAAGTTGCCTAGGTTTGGGTAGTTAGAAATTGTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CCA 90 bp | AATAGTCAGGGCAGTGAGAGATTTGGAGTCTACTTTACAGTACCTTTCCCAGCCCACTGGCTGCCTTGGTaGGACTCGAACTCCACGGCG | + |
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Preference number: 4 (lower is better) Translates to: NSQGSERFGVYFTVPFPAHWLPW*DSNSTA Trigger: CGCCGTGGAGTTCGAGTCCCACCAAGGCAGCCAGTG...GGCTGGGAAAGGTACTGTAAAGTAGACTCCAAATCTCTCACTGCCCTGACTATT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR CAA 72 bp | CTCAGAACTAACCACTGGAAGGGAGCCACTTCAGCTTaGCTTTGGGCACTGCCACGTGAGACTACAGATCCT | + |
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Preference number: 4 (lower is better) Translates to: LRTNHWKGATSA*LWALPRETTDP Trigger: AGGATCTGTAGTCTCACGTGGCAGTGCCCAAAGCAAAGCTGAAGTGGCTCCCTTCCAGTGGTTAGTTCTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR GCA 90 bp | GCACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACATGGAAGGACATTCCTGCTTCTCCCTCCTTaGCGGTGGCCACAGAGATGG | + |
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Preference number: 4 (lower is better) Translates to: ALYSLLPSLLGWKHGRTFLLLPP*RWPQRW Trigger: CCATCTCTGTGGCCACCGGCAAGGAGGGAGAAGCAG...GAATGTCCTTCCATGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR GCA 90 bp | AGTGGAGGTGGTCTCCCTTGCTATGAGAAGGGTGGAATAGTCAGGGCAGTGAGAAAGGCCCTGTCAGCCTaGGCATTTACATTTGACAGC | + |
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Preference number: 4 (lower is better) Translates to: SGGGLPCYEKGGIVRAVRKALSA*AFTFDS Trigger: GCTGTCAAATGTAAATGCGCAGGCTGACAGGGCCTT...TCTCACTGCCCTGACTATTCCACCCTTCTCATAGCAAGGGAGACCACCTCCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CCA 90 bp | TCCCTCCCACAATGCACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACACTTCTGCGCTGCATGTaGAGCCTTCTCATCCGCCCA | + |
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Preference number: 4 (lower is better) Translates to: SLPQCTLQPASFFVRMETLLRCM*SLLIRP Trigger: TGGGCGGATGAGAAGGCTCCACATGCAGCGCAGAAG...TGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGCATTGTGGGAGGGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CCA 90 bp | CCACAATGCACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACATGGAAGGGTGACAGCTGGGGGTaGTTCCGAAAAGCGGTGACC | + |
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Preference number: 4 (lower is better) Translates to: PQCTLQPASFFVRMETWKGDSWG*FRKAVT Trigger: GGTCACCGCTTTTCGGAACCACCCCCAGCTGTCACC...CTTCCATGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGCATTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CCA 90 bp | AATAGTCAGGGCAGTGAGAGATTTGGAGTCTACTTTACAGTACCTTTCCCAGCCCTCCACTGGCTGCCTTaGTGGGACTCGAACTCCACG | + |
|
Preference number: 4 (lower is better) Translates to: NSQGSERFGVYFTVPFPALHWLP*WDSNST Trigger: CGTGGAGTTCGAGTCCCACCAAGGCAGCCAGTGGAG...GGCTGGGAAAGGTACTGTAAAGTAGACTCCAAATCTCTCACTGCCCTGACTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR TCA 90 bp | AGACAGCTAGGATCAGTTGGCAATAGCCTGGAATGTCCTGTTGGGCTAATGGCTACATTTGACAGCTCTTaGTCGATGGCCTCCAGCGAG | + |
|
Preference number: 4 (lower is better) Translates to: RQLGSVGNSLECPVGLMATFDSS*SMASSE Trigger: CTCGCTGGAGGCCATCGATCAAGAGCTGTCAAATGT...AGCCATTAGCCCAACAGGACATTCCAGGCTATTGCCAACTGATCCTAGCTGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR TCA 90 bp | ATTGAGCCATGGGAACTGGTACAGCAGGGGGTATCTGTGTGCTGCCTAGGAACTGGTCTGAGAACCAGTTaGAGAAACTGGGAATCGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IEPWELVQQGVSVCCLGTGLRTS*RNWESC Trigger: ACACGATTCCCAGTTTCTTCAACTGGTTCTCAGACC...AGTTCCTAGGCAGCACACAGATACCCCCTGCTGTACCAGTTCCCATGGCTCAAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR GCA 90 bp | GCACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACATGGAAGGACATTCGGACTCTCCACTGGCTaGCTTGGTGGGACTCGAACT | + |
|
Preference number: 4 (lower is better) Translates to: ALYSLLPSLLGWKHGRTFGLSTG*LGGTRT Trigger: AGTTCGAGTCCCACCAAGGCAGCCAGTGGAGAGTCC...GAATGTCCTTCCATGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CCA 90 bp | TCCCTCCCACAATGCACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACAAATTTGCGTTCCAGCTaGAGGAAGGCCCTGTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SLPQCTLQPASFFVRMETNLRSS*RKALSA Trigger: GGCTGACAGGGCCTTCCTCCAGCTGGAACGCAAATT...TGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGCATTGTGGGAGGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS-3UTR GCA 90 bp | GCACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACATGGAAGGACATTCTGGAGCCCCTGGTCCTaGTTCAGATCCAGATCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: ALYSLLPSLLGWKHGRTFWSPWS*FRSRSS Trigger: CGAAGATCTGGATCTGAAGCAGGACCAGGGGCTCCA...GAATGTCCTTCCATGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS-3UTR CCA 90 bp | AATAGTCAGGGCAGTGAGAGATTTGGAGTCTACTTTACAGTACCTTTCCCAGCCACAGCTCTTGATCGATaGCCTCCAGCGAGTCCATGC | + |
|
Preference number: 4 (lower is better) Translates to: NSQGSERFGVYFTVPFPATALDR*PPASPC Trigger: GCATGGACTCGCTGGAGGCCATCGATCAAGAGCTGT...GGCTGGGAAAGGTACTGTAAAGTAGACTCCAAATCTCTCACTGCCCTGACTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CCA 90 bp | ATTGAGCCATGGGAACTGGTACAGCAGGGGGTATCTGTGTGCTGCCTAGGAACTAATTCTAGGAGGCTGTaGTCTGAGAACCAGTTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: IEPWELVQQGVSVCCLGTNSRRL*SENQLK Trigger: CTTCAACTGGTTCTCAGACCACAGCCTCCTAGAATT...AGTTCCTAGGCAGCACACAGATACCCCCTGCTGTACCAGTTCCCATGGCTCAAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS-3UTR TCA 90 bp | TTTGGAGAAGCTTTCAACAAGGTCTTTCAATCAGAAAGGGAATGCCTGAGGGCTGGTTCCGAAAAGCGGTaGCCCAGAAACCTGGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: FGEAFNKVFQSERECLRAGSEKR*PRNLGC Trigger: ACATCCCAGGTTTCTGGGTCACCGCTTTTCGGAACC...AGCCCTCAGGCATTCCCTTTCTGATTGAAAGACCTTGTTGAAAGCTTCTCCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR TCA 90 bp | ACATTCCTCGCCTGTTACTTCACTCATACCCACCAGCCACCTGCTTGTTGTAGATGCGCTCATATTCTTTaGCCAGCCCCTCATTTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: TFLACYFTHTHQPPACCRCAHIL*PAPHFE Trigger: TTCGAAATGAGGGGCTGGTCAAAGAATATGAGCGCA...TCTACAACAAGCAGGTGGCTGGTGGGTATGAGTGAAGTAACAGGCGAGGAATGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAATTTCTAACTACCCAAACCTAGGCAACTTTGACTTAACCAGAGTGGGTCCCTCCCTATTCCTGTaGATGTGGGCCTGGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTISNYPNLGNFDLTRVGPSLFL*MWAWGS Trigger: GGAACCCCAGGCCCACATCCACAGGAATAGGGAGGG...ACCCACTCTGGTTAAGTCAAAGTTGCCTAGGTTTGGGTAGTTAGAAATTGTTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| 3UTR CAA 72 bp | TGTGCAAAGCTCAACCAGGAGAGAACTAGTGGGCAATaGCACAAGCTTCCATACTCACCAGTAGCTGATCAC | + |
|
Preference number: 4 (lower is better) Translates to: CAKLNQERTSGQ*HKLPYSPVADH Trigger: GTGATCAGCTACTGGTGAGTATGGAAGCTTGTGCAATTGCCCACTAGTTCTCTCCTGGTTGAGCTTTGCACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS-3UTR TCA 90 bp | TTCTTCACAGTACATAGATATCGGGAACACAGCAGAAAGTATGAAGCCTGGCTAGCGAGTCCATGCAATTaGTCTTCGGAGCTCTGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FFTVHRYREHSRKYEAWLASPCN*SSELWV Trigger: GACCCAGAGCTCCGAAGATCAATTGCATGGACTCGC...TAGCCAGGCTTCATACTTTCTGCTGTGTTCCCGATATCTATGTACTGTGAAGAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS-3UTR GCA 90 bp | TCCCTCCCACAATGCACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACAATGAAACTTCTGCGCTaGATGTGGAGCCTTCTCATC | + |
|
Preference number: 4 (lower is better) Translates to: SLPQCTLQPASFFVRMETMKLLR*MWSLLI Trigger: GATGAGAAGGCTCCACATGCAGCGCAGAAGTTTCAT...TGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGCATTGTGGGAGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CCA 90 bp | GCACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACATGGAAGGACATTCTTTGCACCCTACTCTTaGCTGCTTAAGCTCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ALYSLLPSLLGWKHGRTFFAPYS*LLKLLH Trigger: GTGGAGGAGCTTAAGCAGCCAAGAGTAGGGTGCAAA...GAATGTCCTTCCATGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS-3UTR TCA 90 bp | CCACAATGCACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACATGGAAGCTGCGCATTTACATTTaGCAGCTCTTGATCGATGGC | + |
|
Preference number: 4 (lower is better) Translates to: PQCTLQPASFFVRMETWKLRIYI*QLLIDG Trigger: GCCATCGATCAAGAGCTGTCAAATGTAAATGCGCAG...CTTCCATGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGCATTGTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAATTTCTAACTACCCAAACCTAGGCAACTTTGACTTAACCAGAGTGGGTTCCTCTTGGAGCCCCTaGTCCTGCTTCAGATCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: QTISNYPNLGNFDLTRVGSSWSP*SCFRSR Trigger: TCTGGATCTGAAGCAGGACCAGGGGCTCCAAGAGGA...ACCCACTCTGGTTAAGTCAAAGTTGCCTAGGTTTGGGTAGTTAGAAATTGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR CAA 72 bp | CCCTCCCACAATGCACTCTACAGCCTGCTTCCTTCTTaGTTAGGATGGAAACATGGAAGGACATTCAAAACC | + |
|
Preference number: 4 (lower is better) Translates to: PSHNALYSLLPS*LGWKHGRTFKT Trigger: GGTTTTGAATGTCCTTCCATGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGCATTGTGGGAGGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGCCAAAGAGAAAAAGGTATAGCAAGGCCTGTGGGCCACAAACAATTTCTAAACCCCTTCTTTTCCTaGATTGCCGCTCCTGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSQREKGIARPVGHKQFLNPFFS*IAAPAS Trigger: AGAAGCAGGAGCGGCAATGCAGGAAAAGAAGGGGTT...TAGAAATTGTTTGTGGCCCACAGGCCTTGCTATACCTTTTTCTCTTTGGCTCTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS-3UTR CCA 90 bp | CGGATTGAACTTCTAAGAATACAGCTATACATGAAGAGACACCAGAACAAGTTAGTGTCGGTTTCCTCTTaGAGCCCCTGGTCCTGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RIELLRIQLYMKRHQNKLVSVSS*SPWSCF Trigger: GAAGCAGGACCAGGGGCTCCAAGAGGAAACCGACAC...TAACTTGTTCTGGTGTCTCTTCATGTATAGCTGTATTCTTAGAAGTTCAATCCG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS-3UTR CCA 90 bp | CAAACAATTTCTAACTACCCAAACCTAGGCAACTTTGACTTAACCAGAGTGGGTAAACCTGGGATGTTTTaGATGATGAAACTTCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: QTISNYPNLGNFDLTRVGKPGMF*MMKLLR Trigger: GCGCAGAAGTTTCATCATCCAAAACATCCCAGGTTT...ACCCACTCTGGTTAAGTCAAAGTTGCCTAGGTTTGGGTAGTTAGAAATTGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| 3UTR CAA 72 bp | GTGACTTGGCATAGAAGCAGTTTGAAGGCCATGCACTaGGAACACCATTATATATATATATGCAGAACATCG | + |
|
Preference number: 4 (lower is better) Translates to: VTWHRSSLKAMH*EHHYIYICRTS Trigger: CGATGTTCTGCATATATATATATAATGGTGTTCCAAGTGCATGGCCTTCAAACTGCTTCTATGCCAAGTCAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS GCA 90 bp | GTGCTCGGAATCCGGAGACGCGCCTCCATCCGCACCGGCCTCACCTaGAGCCTCCATCTCCCGCACTGTGTCGGTTTCCTCTTGGAGCCC | + |
|
Preference number: 5 (lower is better) Translates to: VLGIRRRASIRTGLT*SLHLPHCVGFLLEP Trigger: GGGCTCCAAGAGGAAACCGACACAGTGCGGGAGATGGAGGCTGCAGGTGAGGCCGGTGCGGATGGAGGCGCGTCTCCGGATTCCGAGCAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS GCA 90 bp | GCACAACTATTCTCAGCCACTCGGAAGCAGAGCTCGGGGCCGCAGTaGTCGGAATCCGGAGACGCGCCTCCATCCGCACCGGCCTCACCT | + |
|
Preference number: 5 (lower is better) Translates to: AQLFSATRKQSSGPQ*SESGDAPPSAPASP Trigger: AGGTGAGGCCGGTGCGGATGGAGGCGCGTCTCCGGATTCCGAGCACTGCGGCCCCGAGCTCTGCTTCCGAGTGGCTGAGAATAGTTGTGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS TCA 90 bp | TTGGTAGTCGTCATTTCCTTGGTCTTCTTCGGCCCCGGCATCTGCTaGGACCCCAGGCCCACCGCACCACAGGCTTCCAGGGCTTTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: LVVVISLVFFGPGIC*DPRPTAPQASRAFG Trigger: ACCGAAAGCCCTGGAAGCCTGTGGTGCGGTGGGCCTGGGGTCTCAGCAGATGCCGGGGCCGAAGAAGACCAAGGAAATGACGACTACCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS CCA 90 bp | GCCTCACCTGCAGCCTCCATCTCCCGCACTGTGTCGGTTTCCTCTTaGAGCCCCTGGTCCTGCTTCAGATCCAGATCTTCGGAGGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: ASPAASISRTVSVSS*SPWSCFRSRSSEAW Trigger: CCATGCCTCCGAAGATCTGGATCTGAAGCAGGACCAGGGGCTCCAAGAGGAAACCGACACAGTGCGGGAGATGGAGGCTGCAGGTGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS CCA 90 bp | TCTTGGAGCCCCTGGTCCTGCTTCAGATCCAGATCTTCGGAGGCATaGGAGGGGGTCGTGGTGTTAGCGAGAGATAGCTCGTTGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SWSPWSCFRSRSSEA*EGVVVLARDSSLFP Trigger: AGGGAACAACGAGCTATCTCTCGCTAACACCACGACCCCCTCCCATGCCTCCGAAGATCTGGATCTGAAGCAGGACCAGGGGCTCCAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CAA 90 bp | ATTGAGCCATGGGAACTGGTACAGCAGGGGGTATCTGTGTGCTGCCTAGGAACTGTAGTCGTCATTTCCTaGGTCTTCTTCGGCCCCGGC | + |
|
Preference number: 5 (lower is better) Translates to: IEPWELVQQGVSVCCLGTVVVIS*VFFGPG Trigger: GCCGGGGCCGAAGAAGACCAAGGAAATGACGACTAC...AGTTCCTAGGCAGCACACAGATACCCCCTGCTGTACCAGTTCCCATGGCTCAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS TCA 90 bp | CATTTGACAGCTCTTGATCGATGGCCTCCAGCGAGTCCATGCAATTaGTCTTCGGAGCTCTGGGTCGAGTCTCCTCTTTCCCTCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: HLTALDRWPPASPCN*SSELWVESPLSLLQ Trigger: CTGGAGGAGGGAAAGAGGAGACTCGACCCAGAGCTCCGAAGATCAATTGCATGGACTCGCTGGAGGCCATCGATCAAGAGCTGTCAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CAA 90 bp | TTTGGAGAAGCTTTCAACAAGGTCTTTCAATCAGAAAGGGAATGCCTGAGGGCTCCTGCTTCTCCCTCCTaGCCGGTGGCCACAGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: FGEAFNKVFQSERECLRAPASPS*PVATEM Trigger: CATCTCTGTGGCCACCGGCAAGGAGGGAGAAGCAGG...AGCCCTCAGGCATTCCCTTTCTGATTGAAAGACCTTGTTGAAAGCTTCTCCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CAA 90 bp | TTTGGAGAAGCTTTCAACAAGGTCTTTCAATCAGAAAGGGAATGCCTGAGGGCTTCTCCACTGGCTGCCTaGGTGGGACTCGAACTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FGEAFNKVFQSERECLRASPLAA*VGLELH Trigger: GTGGAGTTCGAGTCCCACCAAGGCAGCCAGTGGAGA...AGCCCTCAGGCATTCCCTTTCTGATTGAAAGACCTTGTTGAAAGCTTCTCCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CAA 90 bp | TTTGGAGAAGCTTTCAACAAGGTCTTTCAATCAGAAAGGGAATGCCTGAGGGCTTGTGTCGGTTTCCTCTaGGAGCCCCTGGTCCTGCTT | + |
|
Preference number: 5 (lower is better) Translates to: FGEAFNKVFQSERECLRACVGFL*EPLVLL Trigger: AAGCAGGACCAGGGGCTCCAAGAGGAAACCGACACA...AGCCCTCAGGCATTCCCTTTCTGATTGAAAGACCTTGTTGAAAGCTTCTCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CAA 90 bp | TGGCTAGTTCTTGGTAAGAATGTGTCAAGCTTTCTTGTGGCAGAGAACCACTTACCTTCTTTTCCTGCATaGCCGCTCCTGCTTCTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: WLVLGKNVSSFLVAENHLPSFPA*PLLLLP Trigger: AGGGAGAAGCAGGAGCGGCAATGCAGGAAAAGAAGG...TAAGTGGTTCTCTGCCACAAGAAAGCTTGACACATTCTTACCAAGAACTAGCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CAA 90 bp | CCACAATGCACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACATGGAAGCTGCGCTCATATTCTTaGACCAGCCCCTCATTTCGA | + |
|
Preference number: 5 (lower is better) Translates to: PQCTLQPASFFVRMETWKLRSYS*TSPSFR Trigger: TCGAAATGAGGGGCTGGTCAAAGAATATGAGCGCAG...CTTCCATGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGCATTGTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CAA 90 bp | TCCCTCCCACAATGCACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACAGACCACAGCTCCCCTTaGATAATTTCAGCTATTCTG | + |
|
Preference number: 5 (lower is better) Translates to: SLPQCTLQPASFFVRMETDHSSP*IISAIL Trigger: CAGAATAGCTGAAATTATCAAAGGGGAGCTGTGGTC...TGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGCATTGTGGGAGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CAA 90 bp | TCCCTCCCACAATGCACTCTACAGCCTGCTTCCTTCTTTGTTAGGATGGAAACAAAGATGAACTTAAATTaGCACCCTACTCTTGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SLPQCTLQPASFFVRMETKMNLN*HPTLGC Trigger: GCAGCCAAGAGTAGGGTGCAAATTTAAGTTCATCTT...TGTTTCCATCCTAACAAAGAAGGAAGCAGGCTGTAGAGTGCATTGTGGGAGGGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CAA 90 bp | AAGAGCCAAAGAGAAAAAGGTATAGCAAGGCCTGTGGGCCACAAACAATTTCTACCTGCGCATTTACATTaGACAGCTCTTGATCGATGG | + |
|
Preference number: 5 (lower is better) Translates to: KSQREKGIARPVGHKQFLPAHLH*TALDRW Trigger: CCATCGATCAAGAGCTGTCAAATGTAAATGCGCAGG...TAGAAATTGTTTGTGGCCCACAGGCCTTGCTATACCTTTTTCTCTTTGGCTCTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CAA 90 bp | CAAACAATTTCTAACTACCCAAACCTAGGCAACTTTGACTTAACCAGAGTGGGTTGGTCTGAGAACCAGTaGAAGAAACTGGGAATCGTG | + |
|
Preference number: 5 (lower is better) Translates to: QTISNYPNLGNFDLTRVGWSENQ*KKLGIV Trigger: CACGATTCCCAGTTTCTTCAACTGGTTCTCAGACCA...ACCCACTCTGGTTAAGTCAAAGTTGCCTAGGTTTGGGTAGTTAGAAATTGTTTG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS-3UTR CAA 90 bp | CGGATTGAACTTCTAAGAATACAGCTATACATGAAGAGACACCAGAACAAGTTAGAAACCTGGGATGTTTaGGATGATGAAACTTCTGCG | + |
|
Preference number: 5 (lower is better) Translates to: RIELLRIQLYMKRHQNKLETWDV*DDETSA Trigger: CGCAGAAGTTTCATCATCCAAAACATCCCAGGTTTC...TAACTTGTTCTGGTGTCTCTTCATGTATAGCTGTATTCTTAGAAGTTCAATCCG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS GCA 72 bp | TTCTCAGCCACTCGGAAGCAGAGCTCGGGGCCGCAGTaGTCGGAATCCGGAGACGCGCCTCCATCCGCACCG | + |
|
Preference number: 6 (lower is better) Translates to: FSATRKQSSGPQ*SESGDAPPSAP Trigger: CGGTGCGGATGGAGGCGCGTCTCCGGATTCCGAGCACTGCGGCCCCGAGCTCTGCTTCCGAGTGGCTGAGAA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS CAA 72 bp | CGGCTGCCACAGGGGCTGAGGGTGCGTCCCCGCCCTTaGATGGAGACGGAGCATCCTCCAGACCTCTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: RLPQGLRVRPRP*METEHPPDLSL Trigger: CAGCGAGAGGTCTGGAGGATGCTCCGTCTCCATCAAAGGGCGGGGACGCACCCTCAGCCCCTGTGGCAGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS GCA 72 bp | ATCCGGAGACGCGCCTCCATCCGCACCGGCCTCACCTaGAGCCTCCATCTCCCGCACTGTGTCGGTTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: IRRRASIRTGLT*SLHLPHCVGFL Trigger: GAGGAAACCGACACAGTGCGGGAGATGGAGGCTGCAGGTGAGGCCGGTGCGGATGGAGGCGCGTCTCCGGAT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS TCA 72 bp | GTCATTTCCTTGGTCTTCTTCGGCCCCGGCATCTGCTaGGACCCCAGGCCCACCGCACCACAGGCTTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: VISLVFFGPGIC*DPRPTAPQASR Trigger: CCTGGAAGCCTGTGGTGCGGTGGGCCTGGGGTCTCAGCAGATGCCGGGGCCGAAGAAGACCAAGGAAATGAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS CAA 90 bp | GGCCTCACCTGCAGCCTCCATCTCCCGCACTGTGTCGGTTTCCTCTaGGAGCCCCTGGTCCTGCTTCAGATCCAGATCTTCGGAGGCATG | + |
|
Preference number: 6 (lower is better) Translates to: GLTCSLHLPHCVGFL*EPLVLLQIQIFGGM Trigger: CATGCCTCCGAAGATCTGGATCTGAAGCAGGACCAGGGGCTCCAAGAGGAAACCGACACAGTGCGGGAGATGGAGGCTGCAGGTGAGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS CAA 90 bp | GCTCCTGCTTCTCCCTCCTTGCCGGTGGCCACAGAGATGGCGCACTaGGTAGTCGTCATTTCCTTGGTCTTCTTCGGCCCCGGCATCTGC | + |
|
Preference number: 6 (lower is better) Translates to: APASPSLPVATEMAH*VVVISLVFFGPGIC Trigger: GCAGATGCCGGGGCCGAAGAAGACCAAGGAAATGACGACTACCAAGTGCGCCATCTCTGTGGCCACCGGCAAGGAGGGAGAAGCAGGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS GCA 72 bp | CGCACTGTGTCGGTTTCCTCTTGGAGCCCCTGGTCCTaGTTCAGATCCAGATCTTCGGAGGCATGGGAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: RTVSVSSWSPWS*FRSRSSEAWEG Trigger: CCCCTCCCATGCCTCCGAAGATCTGGATCTGAAGCAGGACCAGGGGCTCCAAGAGGAAACCGACACAGTGCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS GCA 72 bp | GGCTGTGAGGCCCTTCAAGCTGACAGCCATTTTTACTaGTGTCGTCGGCTGCCACAGGGGCTGAGGGTGCGT | + |
|
Preference number: 6 (lower is better) Translates to: GCEALQADSHFY*CRRLPQGLRVR Trigger: ACGCACCCTCAGCCCCTGTGGCAGCCGACGACAGCAGTAAAAATGGCTGTCAGCTTGAAGGGCCTCACAGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
||
| CDS CCA 72 bp | CCCTGGTCCTGCTTCAGATCCAGATCTTCGGAGGCATaGGAGGGGGTCGTGGTGTTAGCGAGAGATAGCTCG | + |
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Preference number: 6 (lower is better) Translates to: PWSCFRSRSSEA*EGVVVLARDSS Trigger: CGAGCTATCTCTCGCTAACACCACGACCCCCTCCCATGCCTCCGAAGATCTGGATCTGAAGCAGGACCAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS CCA 72 bp | GCAGCCTCCATCTCCCGCACTGTGTCGGTTTCCTCTTaGAGCCCCTGGTCCTGCTTCAGATCCAGATCTTCG | + |
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Preference number: 6 (lower is better) Translates to: AASISRTVSVSS*SPWSCFRSRSS Trigger: CGAAGATCTGGATCTGAAGCAGGACCAGGGGCTCCAAGAGGAAACCGACACAGTGCGGGAGATGGAGGCTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS CAA 72 bp | TCTCCCTCCTTGCCGGTGGCCACAGAGATGGCGCACTaGGTAGTCGTCATTTCCTTGGTCTTCTTCGGCCCC | + |
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Preference number: 6 (lower is better) Translates to: SPSLPVATEMAH*VVVISLVFFGP Trigger: GGGGCCGAAGAAGACCAAGGAAATGACGACTACCAAGTGCGCCATCTCTGTGGCCACCGGCAAGGAGGGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS CAA 72 bp | TGCAGCCTCCATCTCCCGCACTGTGTCGGTTTCCTCTaGGAGCCCCTGGTCCTGCTTCAGATCCAGATCTTC | + |
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Preference number: 6 (lower is better) Translates to: CSLHLPHCVGFL*EPLVLLQIQIF Trigger: GAAGATCTGGATCTGAAGCAGGACCAGGGGCTCCAAGAGGAAACCGACACAGTGCGGGAGATGGAGGCTGCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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| CDS TCA 72 bp | GCTCTTGATCGATGGCCTCCAGCGAGTCCATGCAATTaGTCTTCGGAGCTCTGGGTCGAGTCTCCTCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: ALDRWPPASPCN*SSELWVESPLS Trigger: GGAAAGAGGAGACTCGACCCAGAGCTCCGAAGATCAATTGCATGGACTCGCTGGAGGCCATCGATCAAGAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000047935.8 |
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