Pregenerated sensors for TSPYL3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000074671Ensembl transcript IDs: ENSMUST00000099194.4
Found 72 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGGCTGTCCAGGCTGCAGATCCTCAATAGTCCAGTCGGTAGGAGCTaGTCTGTCTGCGGTCTTGGAGCCATGGGGTATCCAAGTCTGGTT | + |
|
Preference number: 1 (lower is better) Translates to: WLSRLQILNSPVGRS*SVCGLGAMGYPSLV Trigger: AACCAGACTTGGATACCCCATGGCTCCAAGACCGCAGACAGAGCAGCTCCTACCGACTGGACTATTGAGGATCTGCAGCCTGGACAGCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CCA 90 bp | GGCCTCCAACAGGAGCTGGTCCTTGTGAAGCCTTGTCAGTCGTGGTaGCAAGTAAGTGAAAGGCCATGTTTTACATGTGGTCCAGGCCAA | + |
|
Preference number: 1 (lower is better) Translates to: GLQQELVLVKPCQSW*QVSERPCFTCGPGQ Trigger: TTGGCCTGGACCACATGTAAAACATGGCCTTTCACTTACTTGCCACCACGACTGACAAGGCTTCACAAGGACCAGCTCCTGTTGGAGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CCA 90 bp | GATGGTAGACAAGGTAGAACTCCTCAGAAAGCCAATGGCCAGGCATaGGTAGGGTACAACACGGGTCTTCACAAGCCAACACCAGGCTAT | + |
|
Preference number: 1 (lower is better) Translates to: DGRQGRTPQKANGQA*VGYNTGLHKPTPGY Trigger: ATAGCCTGGTGTTGGCTTGTGAAGACCCGTGTTGTACCCTACCCATGCCTGGCCATTGGCTTTCTGAGGAGTTCTACCTTGTCTACCATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CCA 90 bp | AAGTGGGCAGAGAACACCAGCAGTTCAGAGTTTAGTCTTCCTCACTaGAGACAGGCAAATTCAAGAACCGGTCTCCTTAGCTATTTGGGG | + |
|
Preference number: 1 (lower is better) Translates to: KWAENTSSSEFSLPH*RQANSRTGLLSYLG Trigger: CCCCAAATAGCTAAGGAGACCGGTTCTTGAATTTGCCTGTCTCCAGTGAGGAAGACTAAACTCTGAACTGCTGGTGTTCTCTGCCCACTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CCA 90 bp | GGTACTCTGGATATTCTAAGCCTCGCTAGAGAAACCAGAGCAAAGTaGGCAGAGAACACCAGCAGTTCAGAGTTTAGTCTTCCTCACTGG | + |
|
Preference number: 1 (lower is better) Translates to: GTLDILSLARETRAK*AENTSSSEFSLPHW Trigger: CCAGTGAGGAAGACTAAACTCTGAACTGCTGGTGTTCTCTGCCCACTTTGCTCTGGTTTCTCTAGCGAGGCTTAGAATATCCAGAGTACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR TCA 90 bp | CTTGGAATGAGGCTTCTTAAAGGACTACCAACCTTGCTCCTGCCTTaGGCACACACCCAGATATGCCAGCCTACTATAATCTCTATGGTA | + |
|
Preference number: 1 (lower is better) Translates to: LGMRLLKGLPTLLLP*AHTQICQPTIISMV Trigger: TACCATAGAGATTATAGTAGGCTGGCATATCTGGGTGTGTGCTCAAGGCAGGAGCAAGGTTGGTAGTCCTTTAAGAAGCCTCATTCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR-3UTR GCA 90 bp | GGAGCGCTCACGACATTGACAGGTGACCCTTCCAGACCTGACAGCAGGCAACAACCTGGCTGTCCAGGCTaGAGATCCTCAATAGTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: GALTTLTGDPSRPDSRQQPGCPG*RSSIVQ Trigger: CTGGACTATTGAGGATCTGCAGCCTGGACAGCCAGG...TTGTTGCCTGCTGTCAGGTCTGGAAGGGTCACCTGTCAATGTCGTGAGCGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR-3UTR CCA 90 bp | CCCCGCCCATGTCTCTTCACCTGGCTGTCCAGGCTGCAGATCCTCAATAGTCCATGGGGTATCCAAGTCTaGTTGCCCATCAGGACCAAA | + |
|
Preference number: 2 (lower is better) Translates to: PRPCLFTWLSRLQILNSPWGIQV*LPIRTK Trigger: TTTGGTCCTGATGGGCAACCAGACTTGGATACCCCA...TGGACTATTGAGGATCTGCAGCCTGGACAGCCAGGTGAAGAGACATGGGCGGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CAA 90 bp | AGATCCTCAATAGTCCAGTCGGTAGGAGCTGCTCTGTCTGCGGTCTaGGAGCCATGGGGTATCCAAGTCTGGTTGCCCATCAGGACCAAA | + |
|
Preference number: 2 (lower is better) Translates to: RSSIVQSVGAALSAV*EPWGIQVWLPIRTK Trigger: TTTGGTCCTGATGGGCAACCAGACTTGGATACCCCATGGCTCCAAGACCGCAGACAGAGCAGCTCCTACCGACTGGACTATTGAGGATCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR-3UTR GCA 90 bp | TGCCAGTGGAAGCAAGCCCCATGGCCAGAAGCCTCCCTTCTCCAGGACCTACAAATAACATTGGGTGCCTaGTATAAGTACAGTGGCGTA | + |
|
Preference number: 2 (lower is better) Translates to: CQWKQAPWPEASLLQDLQITLGA*YKYSGV Trigger: TACGCCACTGTACTTATAGCAGGCACCCAATGTTAT...TTGTAGGTCCTGGAGAAGGGAGGCTTCTGGCCATGGGGCTTGCTTCCACTGGCA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR-3UTR GCA 90 bp | GGAAACAGATCAGTTGGAATAGGGCTCAGGAGGTCAGAAGCATCAAGACCATCCAAGGACTACCAACCTTaGTCCTGCCTTGAGCACACA | + |
|
Preference number: 2 (lower is better) Translates to: GNRSVGIGLRRSEASRPSKDYQP*SCLEHT Trigger: TGTGTGCTCAAGGCAGGAGCAAGGTTGGTAGTCCTT...GGATGGTCTTGATGCTTCTGACCTCCTGAGCCCTATTCCAACTGATCTGTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR-3UTR CCA 90 bp | GAGTTTAGTCTTCCTCACTGGAGACAGGCAAATTCAAGAACCGGTCTCCTTAGCTCCTCAGAAAGCCAATaGCCAGGCATGGGTAGGGTA | + |
|
Preference number: 2 (lower is better) Translates to: EFSLPHWRQANSRTGLLSSSESQ*PGMGRV Trigger: TACCCTACCCATGCCTGGCCATTGGCTTTCTGAGGA...GCTAAGGAGACCGGTTCTTGAATTTGCCTGTCTCCAGTGAGGAAGACTAAACTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CAA 90 bp | CCTGAGCAGGCCTGTGTGCTCAGTTTTTCAGCAATGGCAGAGAAGTaGATGATGCATGGGTCTTACTCAACAGGCACAAAATGGAAACCA | + |
|
Preference number: 2 (lower is better) Translates to: PEQACVLSFSAMAEK*MMHGSYSTGTKWKP Trigger: TGGTTTCCATTTTGTGCCTGTTGAGTAAGACCCATGCATCATCAACTTCTCTGCCATTGCTGAAAAACTGAGCACACAGGCCTGCTCAGG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR-3UTR TCA 90 bp | GGCTTCTTAAAGGACTACCAACCTTGCTCCTGCCTTGAGCACACACCCAGATATGTGGTGGCAAGTAAGTaGAAGGCCATGTTTTACATG | + |
|
Preference number: 2 (lower is better) Translates to: GFLKDYQPCSCLEHTPRYVVASK*KAMFYM Trigger: CATGTAAAACATGGCCTTTCACTTACTTGCCACCAC...ATATCTGGGTGTGTGCTCAAGGCAGGAGCAAGGTTGGTAGTCCTTTAAGAAGCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR-3UTR CCA 90 bp | AGCAATGGCAGAGAAGTTGATGATGCATGGGTCTTACTCAACAGGCACAAAATGTGTCACACCTCAGTTTaGGACAGTCAGCACTTGTCA | + |
|
Preference number: 2 (lower is better) Translates to: SNGREVDDAWVLLNRHKMCHTSV*DSQHLS Trigger: TGACAAGTGCTGACTGTCCCAAACTGAGGTGTGACA...CATTTTGTGCCTGTTGAGTAAGACCCATGCATCATCAACTTCTCTGCCATTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR-3UTR TCA 90 bp | CAAATAGCATCTTCAGATATGTTTCAGCGTTGTTCCATTAAAAGCCATGTGATAACCTTGCTCCTGCCTTaGGCACACACCCAGATATGC | + |
|
Preference number: 2 (lower is better) Translates to: QIASSDMFQRCSIKSHVITLLLP*AHTQIC Trigger: GCATATCTGGGTGTGTGCTCAAGGCAGGAGCAAGGT...TATCACATGGCTTTTAATGGAACAACGCTGAAACATATCTGAAGATGCTATTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR-3UTR TCA 90 bp | CAAATAGCATCTTCAGATATGTTTCAGCGTTGTTCCATTAAAAGCCATGTGATAAGGTGTAGGAGAAGCTaGCAAGAGGTCTGGGTTCTG | + |
|
Preference number: 2 (lower is better) Translates to: QIASSDMFQRCSIKSHVIRCRRS*QEVWVL Trigger: CAGAACCCAGACCTCTTGTCAGCTTCTCCTACACCT...TATCACATGGCTTTTAATGGAACAACGCTGAAACATATCTGAAGATGCTATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR-3UTR GCA 90 bp | ATGTCAGAGATAAACCCTCTTCTGACTGCACAAAGAACATTTCTCCATGTGGAAACCACGTTAACTTCCTaGTCACATAAGCTCATTACT | + |
|
Preference number: 2 (lower is better) Translates to: MSEINPLLTAQRTFLHVETTLTS*SHKLIT Trigger: AGTAATGAGCTTATGTGAGCAGGAAGTTAACGTGGT...TTCCACATGGAGAAATGTTCTTTGTGCAGTCAGAAGAGGGTTTATCTCTGACAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR GCA 72 bp | GGCCCCGCCCATGTCTCTTCACCTGGCTGTCCAGGCTaGAGATCCTCAATAGTCCAGTCGGTAGGAGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: GPAHVSSPGCPG*RSSIVQSVGAA Trigger: AGCAGCTCCTACCGACTGGACTATTGAGGATCTGCAGCCTGGACAGCCAGGTGAAGAGACATGGGCGGGGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CCA 72 bp | ACTTCTGGCCTTAGGCCCCGCCCATGTCTCTTCACCTaGCTGTCCAGGCTGCAGATCCTCAATAGTCCAGTC | + |
|
Preference number: 3 (lower is better) Translates to: TSGLRPRPCLFT*LSRLQILNSPV Trigger: GACTGGACTATTGAGGATCTGCAGCCTGGACAGCCAGGTGAAGAGACATGGGCGGGGCCTAAGGCCAGAAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR GCA 72 bp | AGGCTGCAGATCCTCAATAGTCCAGTCGGTAGGAGCTaGTCTGTCTGCGGTCTTGGAGCCATGGGGTATCCA | + |
|
Preference number: 3 (lower is better) Translates to: RLQILNSPVGRS*SVCGLGAMGYP Trigger: TGGATACCCCATGGCTCCAAGACCGCAGACAGAGCAGCTCCTACCGACTGGACTATTGAGGATCTGCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CCA 72 bp | CTGTCTGCGGTCTTGGAGCCATGGGGTATCCAAGTCTaGTTGCCCATCAGGACCAAATGCACCCGCTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: LSAVLEPWGIQV*LPIRTKCTRFI Trigger: GATGAAGCGGGTGCATTTGGTCCTGATGGGCAACCAGACTTGGATACCCCATGGCTCCAAGACCGCAGACAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CCA 72 bp | TCGGTAGGAGCTGCTCTGTCTGCGGTCTTGGAGCCATaGGGTATCCAAGTCTGGTTGCCCATCAGGACCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SVGAALSAVLEP*GIQVWLPIRTK Trigger: TTTGGTCCTGATGGGCAACCAGACTTGGATACCCCATGGCTCCAAGACCGCAGACAGAGCAGCTCCTACCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR GCA 72 bp | ATCCTCAATAGTCCAGTCGGTAGGAGCTGCTCTGTCTaGGGTCTTGGAGCCATGGGGTATCCAAGTCTGGTT | + |
|
Preference number: 3 (lower is better) Translates to: ILNSPVGRSCSV*GLGAMGYPSLV Trigger: AACCAGACTTGGATACCCCATGGCTCCAAGACCGCAGACAGAGCAGCTCCTACCGACTGGACTATTGAGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR-3UTR CAA 90 bp | CCTGAGCAGGCCTGTGTGCTCAGTTTTTCAGCAATGGCAGAGAAGTTGATGATGGTGAAGATCACAGCCTaGGCCCCGAGTCCACCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: PEQACVLSFSAMAEKLMMVKITA*APSPPN Trigger: GTTTGGTGGACTCGGGGCCAAGGCTGTGATCTTCAC...CATCATCAACTTCTCTGCCATTGCTGAAAAACTGAGCACACAGGCCTGCTCAGG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CCA 72 bp | CAAGGTAGAACTCCTCAGAAAGCCAATGGCCAGGCATaGGTAGGGTACAACACGGGTCTTCACAAGCCAACA | + |
|
Preference number: 3 (lower is better) Translates to: QGRTPQKANGQA*VGYNTGLHKPT Trigger: TGTTGGCTTGTGAAGACCCGTGTTGTACCCTACCCATGCCTGGCCATTGGCTTTCTGAGGAGTTCTACCTTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR TCA 72 bp | CACCTCAGTTTGGGACAGTCAGCACTTGTCAAACTTTaGAGAGCTAGGCCTCCAACAGGAGCTGGTCCTTGT | + |
|
Preference number: 3 (lower is better) Translates to: HLSLGQSALVKL*RARPPTGAGPC Trigger: ACAAGGACCAGCTCCTGTTGGAGGCCTAGCTCTTCAAAGTTTGACAAGTGCTGACTGTCCCAAACTGAGGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR TCA 72 bp | CCTTGTGAAGCCTTGTCAGTCGTGGTGGCAAGTAAGTaGAAGGCCATGTTTTACATGTGGTCCAGGCCAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PCEALSVVVASK*KAMFYMWSRPK Trigger: CTTTGGCCTGGACCACATGTAAAACATGGCCTTTCACTTACTTGCCACCACGACTGACAAGGCTTCACAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CCA 72 bp | CAGGAGCTGGTCCTTGTGAAGCCTTGTCAGTCGTGGTaGCAAGTAAGTGAAAGGCCATGTTTTACATGTGGT | + |
|
Preference number: 3 (lower is better) Translates to: QELVLVKPCQSW*QVSERPCFTCG Trigger: ACCACATGTAAAACATGGCCTTTCACTTACTTGCCACCACGACTGACAAGGCTTCACAAGGACCAGCTCCTG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR TCA 72 bp | AGGCTTCTTAAAGGACTACCAACCTTGCTCCTGCCTTaGGCACACACCCAGATATGCCAGCCTACTATAATC | + |
|
Preference number: 3 (lower is better) Translates to: RLLKGLPTLLLP*AHTQICQPTII Trigger: GATTATAGTAGGCTGGCATATCTGGGTGTGTGCTCAAGGCAGGAGCAAGGTTGGTAGTCCTTTAAGAAGCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR TCA 72 bp | CCTGGCAGCTTAAAAACAGGTAGGTGTAGGAGAAGCTaGCAAGAGGTCTGGGTTCTGTGTAGGTCTTGGAAT | + |
|
Preference number: 3 (lower is better) Translates to: PGSLKTGRCRRS*QEVWVLCRSWN Trigger: ATTCCAAGACCTACACAGAACCCAGACCTCTTGTCAGCTTCTCCTACACCTACCTGTTTTTAAGCTGCCAGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CCA 72 bp | GAGAACACCAGCAGTTCAGAGTTTAGTCTTCCTCACTaGAGACAGGCAAATTCAAGAACCGGTCTCCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: ENTSSSEFSLPH*RQANSRTGLLS Trigger: GCTAAGGAGACCGGTTCTTGAATTTGCCTGTCTCCAGTGAGGAAGACTAAACTCTGAACTGCTGGTGTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR TCA 72 bp | CAGATATGTTTCAGCGTTGTTCCATTAAAAGCCATGTaGTATCTCTGCCAGTGGAAGCAAGCCCCATGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: QICFSVVPLKAM*YLCQWKQAPWP Trigger: TGGCCATGGGGCTTGCTTCCACTGGCAGAGATATCACATGGCTTTTAATGGAACAACGCTGAAACATATCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR GCA 72 bp | TCACAAATGCCCAAGCGGTACAGAGCAGTTATAAGGTaGAAAGCTACCTTGCAAATGTCCTCAACTCAACCT | + |
|
Preference number: 3 (lower is better) Translates to: SQMPKRYRAVIR*KATLQMSSTQP Trigger: AGGTTGAGTTGAGGACATTTGCAAGGTAGCTTTGCACCTTATAACTGCTCTGTACCGCTTGGGCATTTGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR GCA 72 bp | CTCAACAGGCACAAAATGGAAACCACGTTAACTTCCTaGTCACATAAGCTCATTACTGGACCAGAAAAGAGT | + |
|
Preference number: 3 (lower is better) Translates to: LNRHKMETTLTS*SHKLITGPEKS Trigger: ACTCTTTTCTGGTCCAGTAATGAGCTTATGTGAGCAGGAAGTTAACGTGGTTTCCATTTTGTGCCTGTTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTGGAAGCAAGCCCCATGGCCAGAAGCCTCCCTTCTCCAGGACCTACAAGGCCTCAGGCTCTCCTaGGCTTCCGCGACCCACTCC | + |
|
Preference number: 4 (lower is better) Translates to: CQWKQAPWPEASLLQDLQGLRLS*ASATHS Trigger: GGAGTGGGTCGCGGAAGCCCAGGAGAGCCTGAGGCC...TTGTAGGTCCTGGAGAAGGGAGGCTTCTGGCCATGGGGCTTGCTTCCACTGGCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR CCA 90 bp | TTGGCCCCGAGTCCACCAAACACGCTAAGGATTCAGAAGTCACAGAGGAGAAGGCGCACCAGCTGCAGGTaGGCCCCATCCGCCTGGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LAPSPPNTLRIQKSQRRRRTSCR*APSAWA Trigger: TGCCCAGGCGGATGGGGCCCACCTGCAGCTGGTGCG...CCTTCTCCTCTGTGACTTCTGAATCCTTAGCGTGTTTGGTGGACTCGGGGCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR GCA 90 bp | TTGGCCCCGAGTCCACCAAACACGCTAAGGATTCAGAAGTCACAGAGGAGAAGGGGTTGCAGGGCTGGCTaGGGGGTTGCAGGGCCTAAG | + |
|
Preference number: 4 (lower is better) Translates to: LAPSPPNTLRIQKSQRRRGCRAG*GVAGPK Trigger: CTTAGGCCCTGCAACCCCGCAGCCAGCCCTGCAACC...CCTTCTCCTCTGTGACTTCTGAATCCTTAGCGTGTTTGGTGGACTCGGGGCCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR TCA 90 bp | TTGGCCCCGAGTCCACCAAACACGCTAAGGATTCAGAAGTCACAGAGGAGAAGGTGGCCGAGCCTCTGCTaGCCACCTTGCAAGGCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: LAPSPPNTLRIQKSQRRRWPSLC*PPCKAS Trigger: CGAAGCCTTGCAAGGTGGTCAGCAGAGGCTCGGCCA...CCTTCTCCTCTGTGACTTCTGAATCCTTAGCGTGTTTGGTGGACTCGGGGCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR CCA 90 bp | CACTGGCCTAGACATAGGCAGGTTGGCAGGGAGAGAGCAGGAGTCCTATGTAAGCCGCCTGGGCACTCATaGCCTCTAACTCCCACTGGA | + |
|
Preference number: 4 (lower is better) Translates to: HWPRHRQVGRERAGVLCKPPGHS*PLTPTG Trigger: TCCAGTGGGAGTTAGAGGCCATGAGTGCCCAGGCGG...CTTACATAGGACTCCTGCTCTCTCCCTGCCAACCTGCCTATGTCTAGGCCAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR GCA 90 bp | TTGGCCCCGAGTCCACCAAACACGCTAAGGATTCAGAAGTCACAGAGGAGAAGGCTCCTACGGGCTAGGTaGAACCGACGCATCCTCCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAPSPPNTLRIQKSQRRRLLRAR*NRRILP Trigger: TGGGAGGATGCGTCGGTTGCACCTAGCCCGTAGGAG...CCTTCTCCTCTGTGACTTCTGAATCCTTAGCGTGTTTGGTGGACTCGGGGCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CAA 72 bp | ATAGTCCAGTCGGTAGGAGCTGCTCTGTCTGCGGTCTaGGAGCCATGGGGTATCCAAGTCTGGTTGCCCATC | + |
|
Preference number: 4 (lower is better) Translates to: IVQSVGAALSAV*EPWGIQVWLPI Trigger: GATGGGCAACCAGACTTGGATACCCCATGGCTCCAAGACCGCAGACAGAGCAGCTCCTACCGACTGGACTAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR GCA 90 bp | GGAGCGCTCACGACATTGACAGGTGACCCTTCCAGACCTGACAGCAGGCAACAACACCGCCTGAGGCTCTaGACTCATACTCCTTCACTA | + |
|
Preference number: 4 (lower is better) Translates to: GALTTLTGDPSRPDSRQQHRLRL*THTPSL Trigger: TAGTGAAGGAGTATGAGTGCAGAGCCTCAGGCGGTG...TTGTTGCCTGCTGTCAGGTCTGGAAGGGTCACCTGTCAATGTCGTGAGCGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR GCA 90 bp | GTACATGACATAGAACAGCGTGAAGATCACAGCCTTGGCCCCGAGTCCACCAAAGCATCCCGGTTCCTGTaGACCAAGGCAGGAGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VHDIEQREDHSLGPESTKASRFL*TKAGGS Trigger: GGAACCTCCTGCCTTGGTGCACAGGAACCGGGATGC...TTTGGTGGACTCGGGGCCAAGGCTGTGATCTTCACGCTGTTCTATGTCATGTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR CCA 90 bp | TTGGCCCCGAGTCCACCAAACACGCTAAGGATTCAGAAGTCACAGAGGAGAAGGCTAACTCCCACTGGATaGCCTCTAGAGGGTCCACGA | + |
|
Preference number: 4 (lower is better) Translates to: LAPSPPNTLRIQKSQRRRLTPTG*PLEGPR Trigger: TCGTGGACCCTCTAGAGGCCATCCAGTGGGAGTTAG...CCTTCTCCTCTGTGACTTCTGAATCCTTAGCGTGTTTGGTGGACTCGGGGCCAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR CCA 90 bp | GGAAACAGATCAGTTGGAATAGGGCTCAGGAGGTCAGAAGCATCAAGACCATCCGCCTCTAACTCCCACTaGATGGCCTCTAGAGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GNRSVGIGLRRSEASRPSASNSH*MASRGS Trigger: GGACCCTCTAGAGGCCATCCAGTGGGAGTTAGAGGC...GGATGGTCTTGATGCTTCTGACCTCCTGAGCCCTATTCCAACTGATCTGTTTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR CCA 90 bp | TGCCAGTGGAAGCAAGCCCCATGGCCAGAAGCCTCCCTTCTCCAGGACCTACAATCATCTTTAATGATCTaGGCCACCCTGTCAGCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: CQWKQAPWPEASLLQDLQSSLMI*ATLSAS Trigger: AGAAGCTGACAGGGTGGCCCAGATCATTAAAGATGA...TTGTAGGTCCTGGAGAAGGGAGGCTTCTGGCCATGGGGCTTGCTTCCACTGGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR TCA 90 bp | TTGGCCCCGAGTCCACCAAACACGCTAAGGATTCAGAAGTCACAGAGGAGAAGGGGTTCAGGAAGGCAGTaGCCCAAAAGCCTGGAATAT | + |
|
Preference number: 4 (lower is better) Translates to: LAPSPPNTLRIQKSQRRRGSGRQ*PKSLEY Trigger: ATATTCCAGGCTTTTGGGTCACTGCCTTCCTGAACC...CCTTCTCCTCTGTGACTTCTGAATCCTTAGCGTGTTTGGTGGACTCGGGGCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR CCA 90 bp | GGCTTCTTAAAGGACTACCAACCTTGCTCCTGCCTTGAGCACACACCCAGATATGCTGATAGCTGTGGGTaGTTCAGGAAGGCAGTGACC | + |
|
Preference number: 4 (lower is better) Translates to: GFLKDYQPCSCLEHTPRYADSCG*FRKAVT Trigger: GGTCACTGCCTTCCTGAACCACCCACAGCTATCAGC...ATATCTGGGTGTGTGCTCAAGGCAGGAGCAAGGTTGGTAGTCCTTTAAGAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR TCA 90 bp | GGAAACAGATCAGTTGGAATAGGGCTCAGGAGGTCAGAAGCATCAAGACCATCCGCTGTGAAAACCAGCTaGAGAAGCTTCGCACGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GNRSVGIGLRRSEASRPSAVKTS*RSFARH Trigger: ATGCCGTGCGAAGCTTCTTCAGCTGGTTTTCACAGC...GGATGGTCTTGATGCTTCTGACCTCCTGAGCCCTATTCCAACTGATCTGTTTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR CCA 90 bp | ACACACCCAGATATGCCAGCCTACTATAATCTCTATGGTAGTAGGAGCGCTCACCCTCAGTCTTTCCTTTaGTCCCCACCCCATTACCCG | + |
|
Preference number: 4 (lower is better) Translates to: THPDMPAYYNLYGSRSAHPQSFL*SPPHYP Trigger: CGGGTAATGGGGTGGGGACCAAAGGAAAGACTGAGG...GTGAGCGCTCCTACTACCATAGAGATTATAGTAGGCTGGCATATCTGGGTGTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CAA 72 bp | CTTAGGTGTCACACCTCAGTTTGGGACAGTCAGCACTaGTCAAACTTTGAAGAGCTAGGCCTCCAACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LRCHTSVWDSQH*SNFEELGLQQE Trigger: CTCCTGTTGGAGGCCTAGCTCTTCAAAGTTTGACAAGTGCTGACTGTCCCAAACTGAGGTGTGACACCTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR CCA 90 bp | CACTGGCCTAGACATAGGCAGGTTGGCAGGGAGAGAGCAGGAGTCCTATGTAAGAGTGACCCAAAAGCCTaGAATATTTTGAATGATGAA | + |
|
Preference number: 4 (lower is better) Translates to: HWPRHRQVGRERAGVLCKSDPKA*NILNDE Trigger: TTCATCATTCAAAATATTCCAGGCTTTTGGGTCACT...CTTACATAGGACTCCTGCTCTCTCCCTGCCAACCTGCCTATGTCTAGGCCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR TCA 90 bp | GAGTTTAGTCTTCCTCACTGGAGACAGGCAAATTCAAGAACCGGTCTCCTTAGCAAGCCTGGAATATTTTaGATGATGAAGCTCCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: EFSLPHWRQANSRTGLLSKPGIF*MMKLLR Trigger: CCGTAGGAGCTTCATCATTCAAAATATTCCAGGCTT...GCTAAGGAGACCGGTTCTTGAATTTGCCTGTCTCCAGTGAGGAAGACTAAACTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CAA 72 bp | GCCTGTGTGCTCAGTTTTTCAGCAATGGCAGAGAAGTaGATGATGCATGGGTCTTACTCAACAGGCACAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ACVLSFSAMAEK*MMHGSYSTGTK Trigger: TTTTGTGCCTGTTGAGTAAGACCCATGCATCATCAACTTCTCTGCCATTGCTGAAAAACTGAGCACACAGGC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| 3UTR CAA 72 bp | AGACAGGCAAATTCAAGAACCGGTCTCCTTAGCTATTaGGGGAAACAAATAGCATCTTCAGATATGTTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: RQANSRTGLLSY*GKQIASSDMFQ Trigger: CTGAAACATATCTGAAGATGCTATTTGTTTCCCCAAATAGCTAAGGAGACCGGTTCTTGAATTTGCCTGTCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS CCA 90 bp | GGGTCCACGATAAGAGCCCTGAGGTCCAGAGGCCTCAGGCTCTCCTaGGCTTCCGCGACCCACTCCAGCTTCTCCCCCACCTCCGCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GSTIRALRSRGLRLS*ASATHSSFSPTSAG Trigger: GCCTGCGGAGGTGGGGGAGAAGCTGGAGTGGGTCGCGGAAGCCCAGGAGAGCCTGAGGCCTCTGGACCTCAGGGCTCTTATCGTGGACCC 68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS GCA 90 bp | CGGGCTAGGTGCAACCGACGCATCCTCCCAAACCTGCGCACCAGCTaGAGGTGGGCCCCATCCGCCTGGGCACTCATGGCCTCTAACTCC | + |
|
Preference number: 5 (lower is better) Translates to: RARCNRRILPNLRTS*RWAPSAWALMASNS Trigger: GGAGTTAGAGGCCATGAGTGCCCAGGCGGATGGGGCCCACCTGCAGCTGGTGCGCAGGTTTGGGAGGATGCGTCGGTTGCACCTAGCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS TCA 90 bp | ATCCAGGTTCAGAACGCGGGAGGCAGAGTTCTCTCCAGTGTTTTCTaGGGAAGGCGGTGCGGTTGCAGGGCTGGCTGCGGGGTTGCAGGG | + |
|
Preference number: 5 (lower is better) Translates to: IQVQNAGGRVLSSVF*GRRCGCRAGCGVAG Trigger: CCCTGCAACCCCGCAGCCAGCCCTGCAACCGCACCGCCTTCCTCAGAAAACACTGGAGAGAACTCTGCCTCCCGCGTTCTGAACCTGGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS TCA 90 bp | GGGCCACCCTGTCAGCTTCTAGGAGGCTATGCTGTGAAAACCAGCTaGAGAAGCTTCGCACGGCATCCCGGTTCCTGTGCACCAAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPPCQLLGGYAVKTS*RSFARHPGSCAPRQ Trigger: CTGCCTTGGTGCACAGGAACCGGGATGCCGTGCGAAGCTTCTTCAGCTGGTTTTCACAGCATAGCCTCCTAGAAGCTGACAGGGTGGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR CAA 90 bp | ATGTCAGAGATAAACCCTCTTCTGACTGCACAAAGAACATTTCTCCATGTGGAAAGGAAGGCGGTGCGGTaGCAGGGCTGGCTGCGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: MSEINPLLTAQRTFLHVERKAVR*QGWLRG Trigger: ACCCCGCAGCCAGCCCTGCAACCGCACCGCCTTCCT...TTCCACATGGAGAAATGTTCTTTGTGCAGTCAGAAGAGGGTTTATCTCTGACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR CAA 90 bp | GGAGCGCTCACGACATTGACAGGTGACCCTTCCAGACCTGACAGCAGGCAACAAAACAGGAACTTGAACTaGCAACCTGTTCTGGAGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GALTTLTGDPSRPDSRQQNRNLN*QPVLEC Trigger: GCACTCCAGAACAGGTTGCAAGTTCAAGTTCCTGTT...TTGTTGCCTGCTGTCAGGTCTGGAAGGGTCACCTGTCAATGTCGTGAGCGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR CAA 90 bp | GGCTTCTTAAAGGACTACCAACCTTGCTCCTGCCTTGAGCACACACCCAGATATCCCCAGCAAGTAGTATaGCAAAGGGTTGGGCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: GFLKDYQPCSCLEHTPRYPQQVV*QRVGPQ Trigger: CTGTGGCCCAACCCTTTGCAATACTACTTGCTGGGG...ATATCTGGGTGTGTGCTCAAGGCAGGAGCAAGGTTGGTAGTCCTTTAAGAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR CAA 90 bp | TTGGCCCCGAGTCCACCAAACACGCTAAGGATTCAGAAGTCACAGAGGAGAAGGAAAGCCTGGAATATTTaGAATGATGAAGCTCCTACG | + |
|
Preference number: 5 (lower is better) Translates to: LAPSPPNTLRIQKSQRRRKAWNI*NDEAPT Trigger: CGTAGGAGCTTCATCATTCAAAATATTCCAGGCTTT...CCTTCTCCTCTGTGACTTCTGAATCCTTAGCGTGTTTGGTGGACTCGGGGCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS-3UTR CAA 90 bp | ATGTCAGAGATAAACCCTCTTCTGACTGCACAAAGAACATTTCTCCATGTGGAATCCTCAGTCTTTCCTTaGGTCCCCACCCCATTACCC | + |
|
Preference number: 5 (lower is better) Translates to: MSEINPLLTAQRTFLHVESSVFP*VPTPLP Trigger: GGGTAATGGGGTGGGGACCAAAGGAAAGACTGAGGA...TTCCACATGGAGAAATGTTCTTTGTGCAGTCAGAAGAGGGTTTATCTCTGACAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS GCA 72 bp | CGGCTCAGCTCCGGGGACACGGGGCCGGGCCGGGTGTaGATCCCGCTCTTGTATGGGCGGCAGGCACATGGT | + |
|
Preference number: 6 (lower is better) Translates to: RLSSGDTGPGRV*IPLLYGRQAHG Trigger: ACCATGTGCCTGCCGCCCATACAAGAGCGGGATGCACACCCGGCCCGGCCCCGTGTCCCCGGAGCTGAGCCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS CAA 72 bp | GGGGACACGGGGCCGGGCCGGGTGTGCATCCCGCTCTaGTATGGGCGGCAGGCACATGGTCGCCTCCAGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GDTGPGRVCIPL*YGRQAHGRLQN Trigger: GTTCTGGAGGCGACCATGTGCCTGCCGCCCATACAAGAGCGGGATGCACACCCGGCCCGGCCCCGTGTCCCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS CCA 72 bp | ATAAGAGCCCTGAGGTCCAGAGGCCTCAGGCTCTCCTaGGCTTCCGCGACCCACTCCAGCTTCTCCCCCACC | + |
|
Preference number: 6 (lower is better) Translates to: IRALRSRGLRLS*ASATHSSFSPT Trigger: GGTGGGGGAGAAGCTGGAGTGGGTCGCGGAAGCCCAGGAGAGCCTGAGGCCTCTGGACCTCAGGGCTCTTAT 65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS CCA 72 bp | GCATCCCGGTTCCTGTGCACCAAGGCAGGAGGTTCCTaGCCTCGGTGCCAGAGGATGCGAGTAGCAATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: ASRFLCTKAGGS*PRCQRMRVAMD Trigger: GTCCATTGCTACTCGCATCCTCTGGCACCGAGGCCAGGAACCTCCTGCCTTGGTGCACAGGAACCGGGATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS TCA 72 bp | CCAGAGGATGCGAGTAGCAATGGACACCACACCGCCTaGGGCTCTGCACTCATACTCCTTCACTATCACCTC | + |
|
Preference number: 6 (lower is better) Translates to: PEDASSNGHHTA*GSALILLHYHL Trigger: GAGGTGATAGTGAAGGAGTATGAGTGCAGAGCCTCAGGCGGTGTGGTGTCCATTGCTACTCGCATCCTCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS CAA 72 bp | CCACCTTGCAAGGCTTCGTCTAGCTCTGTAGGGCCTTaGCCCCAGCAAGTAGTATTGCAAAGGGTTGGGCCA | + |
|
Preference number: 6 (lower is better) Translates to: PPCKASSSSVGP*PQQVVLQRVGP Trigger: TGGCCCAACCCTTTGCAATACTACTTGCTGGGGCAAAGGCCCTACAGAGCTAGACGAAGCCTTGCAAGGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||
| CDS TCA 72 bp | TGTCAGCTTCTAGGAGGCTATGCTGTGAAAACCAGCTaGAGAAGCTTCGCACGGCATCCCGGTTCCTGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: CQLLGGYAVKTS*RSFARHPGSCA Trigger: TGCACAGGAACCGGGATGCCGTGCGAAGCTTCTTCAGCTGGTTTTCACAGCATAGCCTCCTAGAAGCTGACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000099194.4 |
||