Pregenerated sensors for TSPYL2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041096Ensembl transcript IDs: ENSMUST00000044509.7, ENSMUST00000178165.2
Found 136 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACACTaGGGCGGGCTAGCAGTCAGGGCTGTTGAAGGGAAGAAAGGAGTT | + |
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Preference number: 1 (lower is better) Translates to: GEQESHKGEAALQRH*GGLAVRAVEGKKGV Trigger: AACTCCTTTCTTCCCTTCAACAGCCCTGACTGCTAGCCCGCCTCAGTGTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| 3UTR CCA 90 bp | AGCAGCACACAGAAGCCTGCAGTGGAGGAGGGCCGAAGGGGAGCGTaGTCCCTCCTCCAAATAAGAACTCTGCAATTACTAAACCATAAA | + |
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Preference number: 1 (lower is better) Translates to: SSTQKPAVEEGRRGA*SLLQIRTLQLLNHK Trigger: TTTATGGTTTAGTAATTGCAGAGTTCTTATTTGGAGGAGGGACCACGCTCCCCTTCGGCCCTCCTCCACTGCAGGCTTCTGTGTGCTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| 3UTR-3UTR TCA 90 bp | GCGGGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACGGGCTAGAGGGGCCCTaGCCAAGGCATCACAATAAA | + |
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Preference number: 2 (lower is better) Translates to: AGLLGSRNPTKAKLPCKDGLEGP*PRHHNK Trigger: TTTATTGTGATGCCTTGGTCAGGGCCCCTCTAGCCC...GTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCCCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| 3UTR-3UTR CCA 90 bp | GGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACACTCCCAGAAGTGCAATATaGGGCCGCACAGCCCTAGCT | + |
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Preference number: 2 (lower is better) Translates to: GLLGSRNPTKAKLPCKDTPRSAI*GRTALA Trigger: AGCTAGGGCTGTGCGGCCCCATATTGCACTTCTGGG...AGTGTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| 3UTR-3UTR CCA 90 bp | GATTCTTGGCTCTTTCCTTTCCGTGTTGCTTCTTTCTGCTTGATCTGTAGCCACCCTGAGCGGTTGCGCTaGAACTCCTTGACGATCACC | + |
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Preference number: 2 (lower is better) Translates to: DSWLFPFRVASFCLICSHPERLR*NSLTIT Trigger: GGTGATCGTCAAGGAGTTCCAGCGCAACCGCTCAGG...GTGGCTACAGATCAAGCAGAAAGAAGCAACACGGAAAGGAAAGAGCCAAGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
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| 3UTR-3UTR TCA 90 bp | CGGTTGCGCTGGAACTCCTTGACGATCACCATGTTTGTAAAGTATGGGTTTGTCCCATGGAGATATGTCTaGGGTCCTGTACCTGAAGAT | + |
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Preference number: 2 (lower is better) Translates to: RLRWNSLTITMFVKYGFVPWRYV*GPVPED Trigger: ATCTTCAGGTACAGGACCTCAGACATATCTCCATGG...GACAAACCCATACTTTACAAACATGGTGATCGTCAAGGAGTTCCAGCGCAACCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
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| 3UTR-3UTR CCA 90 bp | ACTGGGTTAACCCACAGGTCGTTCTTGATGATCTCAGCAATTCTGTCAGCTTCTCATGTTTGTAAAGTATaGGTTTGTCTGGAAGTACAG | + |
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Preference number: 2 (lower is better) Translates to: TGLTHRSFLMISAILSASHVCKV*VCLEVQ Trigger: CTGTACTTCCAGACAAACCCATACTTTACAAACATG...AGAAGCTGACAGAATTGCTGAGATCATCAAGAACGACCTGTGGGTTAACCCAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
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| 3UTR-3UTR CAA 90 bp | GCGGGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACCACGGAGAGAGGGGCTaGGGCCTAAGCTCACGAGAA | + |
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Preference number: 3 (lower is better) Translates to: AGLLGSRNPTKAKLPCKDHGERG*GLSSRE Trigger: TTCTCGTGAGCTTAGGCCCAAGCCCCTCTCTCCGTG...GTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| 3UTR TCA 72 bp | GAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACACTaGGGCGGGCTAGCAGTCAGGGCTGTTGAAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: ESHKGEAALQRH*GGLAVRAVEGK Trigger: CTTCCCTTCAACAGCCCTGACTGCTAGCCCGCCTCAGTGTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| 3UTR TCA 72 bp | CCAACGTATTGGGGTAGAATGAGACACCAACCGGCCTaGGCGGTTGCGCTGGAACTCCTTGACGATCACCAT | + |
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Preference number: 3 (lower is better) Translates to: PTYWGRMRHQPA*AVALELLDDHH Trigger: ATGGTGATCGTCAAGGAGTTCCAGCGCAACCGCTCAGGCCGGTTGGTGTCTCATTCTACCCCAATACGTTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
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| 3UTR CCA 72 bp | CAGAAGCCTGCAGTGGAGGAGGGCCGAAGGGGAGCGTaGTCCCTCCTCCAAATAAGAACTCTGCAATTACTA | + |
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Preference number: 3 (lower is better) Translates to: QKPAVEEGRRGA*SLLQIRTLQLL Trigger: TAGTAATTGCAGAGTTCTTATTTGGAGGAGGGACCACGCTCCCCTTCGGCCCTCCTCCACTGCAGGCTTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| 3UTR TCA 72 bp | GCAAAGACACTGAGGCGGGCTAGCAGTCAGGGCTGTTaGAGGGAAGAAAGGAGTTGCAGAGTAACTCTGGAG | + |
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Preference number: 3 (lower is better) Translates to: AKTLRRASSQGC*REERSCRVTLE Trigger: CTCCAGAGTTACTCTGCAACTCCTTTCTTCCCTTCAACAGCCCTGACTGCTAGCCCGCCTCAGTGTCTTTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| 3UTR TCA 72 bp | CTTGGCTCTTTCCTTTCCGTGTTGCTTCTTTCTGCTTaGTCTGTAGCCACCTCGTCTCATATAGTAGCGTAC | + |
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Preference number: 3 (lower is better) Translates to: LGSFLSVLLLSA*SVATSSHIVAY Trigger: GTACGCTACTATATGAGACGAGGTGGCTACAGATCAAGCAGAAAGAAGCAACACGGAAAGGAAAGAGCCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
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| 3UTR GCA 72 bp | GATTCTTGGCTCTTTCCTTTCCGTGTTGCTTCTTTCTaGTTGATCTGTAGCCACCTCGTCTCATATAGTAGC | + |
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Preference number: 3 (lower is better) Translates to: DSWLFPFRVASF*LICSHLVSYSS Trigger: GCTACTATATGAGACGAGGTGGCTACAGATCAAGCAGAAAGAAGCAACACGGAAAGGAAAGAGCCAAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
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| 3UTR TCA 72 bp | TGTCTTCAATTGCATAATGGTCATGAGCATCTTCCATaGTCACCATTTCATATTGATTCTTGGCTCTTTCCT | + |
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Preference number: 3 (lower is better) Translates to: CLQLHNGHEHLP*SPFHIDSWLFP Trigger: AGGAAAGAGCCAAGAATCAATATGAAATGGTGATCATGGAAGATGCTCATGACCATTATGCAATTGAAGACA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
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| CDS-3UTR CCA 90 bp | GGCGGGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACGGACGCTGCTGGGGTaGAGGCAGGGGCAGTCGCTG | + |
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Preference number: 4 (lower is better) Translates to: GGASGEQESHKGEAALQRRTLLG*RQGQSL Trigger: CAGCGACTGCCCCTGCCTCCACCCCAGCAGCGTCCG...TCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCCCGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR TCA 90 bp | CACAGAAGCCTGCAGTGGAGGAGGGCCGAAGGGGAGCGTGGTCCCTCCTCCAAAGCCTCCAGGTCCATTTaGATGCTCTCCAGGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: HRSLQWRRAEGERGPSSKASRSI*MLSRAC Trigger: GCAGGCCCTGGAGAGCATTCAAATGGACCTGGAGGC...TTTGGAGGAGGGACCACGCTCCCCTTCGGCCCTCCTCCACTGCAGGCTTCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR GCA 90 bp | CACAGAAGCCTGCAGTGGAGGAGGGCCGAAGGGGAGCGTGGTCCCTCCTCCAAACCAGGGCCTGCAGTATaGTCTCCATCCTCTGGGCAC | + |
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Preference number: 4 (lower is better) Translates to: HRSLQWRRAEGERGPSSKPGPAV*SPSSGH Trigger: GTGCCCAGAGGATGGAGAGCATACTGCAGGCCCTGG...TTTGGAGGAGGGACCACGCTCCCCTTCGGCCCTCCTCCACTGCAGGCTTCTGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR TCA 90 bp | CACAGAAGCCTGCAGTGGAGGAGGGCCGAAGGGGAGCGTGGTCCCTCCTCCAAAATGGGAGCGTTTCCATaGTCCCTGTGGAAGGGGCCT | + |
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Preference number: 4 (lower is better) Translates to: HRSLQWRRAEGERGPSSKMGAFP*SLWKGP Trigger: AGGCCCCTTCCACAGGGATCATGGAAACGCTCCCAT...TTTGGAGGAGGGACCACGCTCCCCTTCGGCCCTCCTCCACTGCAGGCTTCTGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR CCA 90 bp | GGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACACTGGGTCTCGGACGCTGCTaGGGTGGAGGCAGGGGCAGT | + |
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Preference number: 4 (lower is better) Translates to: GFWGAGIPQRRSCLAKTLGLGRC*GGGRGS Trigger: ACTGCCCCTGCCTCCACCCCAGCAGCGTCCGAGACC...CAGTGTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR TCA 90 bp | GGCGGGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACCCCTTCCTCAAGAATaGCATAGGGCAGTGGTGGGG | + |
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Preference number: 4 (lower is better) Translates to: GGASGEQESHKGEAALQRPLPQE*HRAVVG Trigger: CCCCACCACTGCCCTATGTCATTCTTGAGGAAGGGG...TCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR TCA 90 bp | CCCAGAAGTGCAATATGGGGCCGCACAGCCCTAGCTGAAGAGGAGGGCAAATGGAGGCCTTGCCTGCCTTaGTGTTCACCGCCTCCAGGT | + |
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Preference number: 4 (lower is better) Translates to: PRSAIWGRTALAEEEGKWRPCLP*CSPPPG Trigger: ACCTGGAGGCGGTGAACATCAAGGCAGGCAAGGCCT...CCATTTGCCCTCCTCTTCAGCTAGGGCTGTGCGGCCCCATATTGCACTTCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR GCA 90 bp | GGCGGGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACCTTCTCTCCGAGGCTaGTGGGCTCTGCAACCTGAA | + |
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Preference number: 4 (lower is better) Translates to: GGASGEQESHKGEAALQRPSLRG*WALQPE Trigger: TTCAGGTTGCAGAGCCCAGCAGCCTCGGAGAGAAGG...TCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCCCGCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR GCA 90 bp | GCGGGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACGGTTCCTGGCCCCGGTaGCAACGTATTGGGGTAGAA | + |
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Preference number: 4 (lower is better) Translates to: AGLLGSRNPTKAKLPCKDGSWPR*QRIGVE Trigger: TTCTACCCCAATACGTTGGCACCGGGGCCAGGAACC...GTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR CCA 90 bp | CACAGAAGCCTGCAGTGGAGGAGGGCCGAAGGGGAGCGTGGTCCCTCCTCCAAACCTCACTTAGCTGGCTaGCTTCCTCACTGGTCTCTT | + |
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Preference number: 4 (lower is better) Translates to: HRSLQWRRAEGERGPSSKPHLAG*LPHWSL Trigger: AAGAGACCAGTGAGGAAGCCAGCCAGCTAAGTGAGG...TTTGGAGGAGGGACCACGCTCCCCTTCGGCCCTCCTCCACTGCAGGCTTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR TCA 90 bp | CACAGAAGCCTGCAGTGGAGGAGGGCCGAAGGGGAGCGTGGTCCCTCCTCCAAAACCGGCAGCACTTCCTaGATATCAGAATCTTCGGAG | + |
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Preference number: 4 (lower is better) Translates to: HRSLQWRRAEGERGPSSKTGSTS*ISESSE Trigger: CTCCGAAGATTCTGATATTCAGGAAGTGCTGCCGGT...TTTGGAGGAGGGACCACGCTCCCCTTCGGCCCTCCTCCACTGCAGGCTTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR CCA 90 bp | TGCAATTGTGACGAAGGTCACAGCGGCCCTTCTCGCTTAGAGATAGGATGTCCAGACATAGGGCAGTGGTaGGGGCAGCGTGGGGCCCAC | + |
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Preference number: 4 (lower is better) Translates to: CNCDEGHSGPSRLEIGCPDIGQW*GQRGAH Trigger: GTGGGCCCCACGCTGCCCCCACCACTGCCCTATGTC...TGGACATCCTATCTCTAAGCGAGAAGGGCCGCTGTGACCTTCGTCACAATTGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR GCA 90 bp | CACAGAAGCCTGCAGTGGAGGAGGGCCGAAGGGGAGCGTGGTCCCTCCTCCAAAAACCTGAAAGTCAATTaGCAGGCTTCCCCCAGAGAT | + |
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Preference number: 4 (lower is better) Translates to: HRSLQWRRAEGERGPSSKNLKVN*QASPRD Trigger: ATCTCTGGGGGAAGCCTGGCAATTGACTTTCAGGTT...TTTGGAGGAGGGACCACGCTCCCCTTCGGCCCTCCTCCACTGCAGGCTTCTGTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR GCA 90 bp | CCCAGAAGTGCAATATGGGGCCGCACAGCCCTAGCTGAAGAGGAGGGCAAATGGCAAGAAGGCCTTGCCTaGCTTGATGTTCACCGCCTC | + |
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Preference number: 4 (lower is better) Translates to: PRSAIWGRTALAEEEGKWQEGLA*LDVHRL Trigger: GAGGCGGTGAACATCAAGGCAGGCAAGGCCTTCTTG...CCATTTGCCCTCCTCTTCAGCTAGGGCTGTGCGGCCCCATATTGCACTTCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR TCA 90 bp | AACCGGCCTGAGCGGTTGCGCTGGAACTCCTTGACGATCACCATGTTTGTAAAGGCCTCCAGGTCCATTTaGATGCTCTCCAGGGCCTGC | + |
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Preference number: 4 (lower is better) Translates to: NRPERLRWNSLTITMFVKASRSI*MLSRAC Trigger: GCAGGCCCTGGAGAGCATTCAAATGGACCTGGAGGC...CTTTACAAACATGGTGATCGTCAAGGAGTTCCAGCGCAACCGCTCAGGCCGGTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
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| CDS-3UTR GCA 90 bp | CCCAGAAGTGCAATATGGGGCCGCACAGCCCTAGCTGAAGAGGAGGGCAAATGGGAGGCTGCTGGGCTCTaGAACCTGAAAGTCAATTGC | + |
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Preference number: 4 (lower is better) Translates to: PRSAIWGRTALAEEEGKWEAAGL*NLKVNC Trigger: GCAATTGACTTTCAGGTTGCAGAGCCCAGCAGCCTC...CCATTTGCCCTCCTCTTCAGCTAGGGCTGTGCGGCCCCATATTGCACTTCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR GCA 90 bp | GGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACACTGATGCTCTCCAGGGCCTaGAGTATGCTCTCCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: GFWGAGIPQRRSCLAKTLMLSRA*SMLSIL Trigger: GAGGATGGAGAGCATACTGCAGGCCCTGGAGAGCAT...CAGTGTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR GCA 90 bp | GACACCAACCGGCCTGAGCGGTTGCGCTGGAACTCCTTGACGATCACCATGTTTATGCTCTCCAGGGCCTaGAGTATGCTCTCCATCCTC | + |
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Preference number: 4 (lower is better) Translates to: DTNRPERLRWNSLTITMFMLSRA*SMLSIL Trigger: GAGGATGGAGAGCATACTGCAGGCCCTGGAGAGCAT...AAACATGGTGATCGTCAAGGAGTTCCAGCGCAACCGCTCAGGCCGGTTGGTGTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
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| CDS-3UTR TCA 90 bp | CACAGAAGCCTGCAGTGGAGGAGGGCCGAAGGGGAGCGTGGTCCCTCCTCCAAAGATTGGAAAACCAGTTaGAGAAGCTTTCTCTGGTGT | + |
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Preference number: 4 (lower is better) Translates to: HRSLQWRRAEGERGPSSKDWKTS*RSFLWC Trigger: ACACCAGAGAAAGCTTCTTCAACTGGTTTTCCAATC...TTTGGAGGAGGGACCACGCTCCCCTTCGGCCCTCCTCCACTGCAGGCTTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR TCA 90 bp | GCGGGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACTTGCTTCTTTCTGCTTaGTCTGTAGCCACCTCGTCT | + |
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Preference number: 4 (lower is better) Translates to: AGLLGSRNPTKAKLPCKDLLLSA*SVATSS Trigger: AGACGAGGTGGCTACAGATCAAGCAGAAAGAAGCAA...GTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCCCGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR GCA 90 bp | CCCAGAAGTGCAATATGGGGCCGCACAGCCCTAGCTGAAGAGGAGGGCAAATGGCAGAAGCCTGGGATATaGTGGATGATGAGGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: PRSAIWGRTALAEEEGKWQKPGI*WMMRSL Trigger: CAGAGACCTCATCATCCAGCATATCCCAGGCTTCTG...CCATTTGCCCTCCTCTTCAGCTAGGGCTGTGCGGCCCCATATTGCACTTCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR CCA 90 bp | CACAGAAGCCTGCAGTGGAGGAGGGCCGAAGGGGAGCGTGGTCCCTCCTCCAAAATTGAAATTCTGGGGTaGTTGAGGAATGCTTTGACC | + |
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Preference number: 4 (lower is better) Translates to: HRSLQWRRAEGERGPSSKIEILG*LRNALT Trigger: GGTCAAAGCATTCCTCAACCACCCCAGAATTTCAAT...TTTGGAGGAGGGACCACGCTCCCCTTCGGCCCTCCTCCACTGCAGGCTTCTGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR GCA 90 bp | ACCAACCGGCCTGAGCGGTTGCGCTGGAACTCCTTGACGATCACCATGTTTGTACCAGGTCCATTTGAATaGTCTCCAGGGCCTGCAGTA | + |
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Preference number: 4 (lower is better) Translates to: TNRPERLRWNSLTITMFVPGPFE*SPGPAV Trigger: TACTGCAGGCCCTGGAGAGCATTCAAATGGACCTGG...TACAAACATGGTGATCGTCAAGGAGTTCCAGCGCAACCGCTCAGGCCGGTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
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| CDS-3UTR CCA 90 bp | TGCAATTGTGACGAAGGTCACAGCGGCCCTTCTCGCTTAGAGATAGGATGTCCAATGCTCTCCATCCTCTaGGCACTCCTCTCTCGGCTC | + |
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Preference number: 4 (lower is better) Translates to: CNCDEGHSGPSRLEIGCPMLSIL*ALLSRL Trigger: GAGCCGAGAGAGGAGTGCCCAGAGGATGGAGAGCAT...TGGACATCCTATCTCTAAGCGAGAAGGGCCGCTGTGACCTTCGTCACAATTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR CCA 90 bp | CTGAAGAGGAGGGCAAATGGGAGAGGGCATAGGGGTATATATAGAGAGCCCCTACCTGAGCGGTTGCGCTaGAACTCCTTGACGATCACC | + |
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Preference number: 4 (lower is better) Translates to: LKRRANGRGHRGIYREPLPERLR*NSLTIT Trigger: GGTGATCGTCAAGGAGTTCCAGCGCAACCGCTCAGG...TAGGGGCTCTCTATATATACCCCTATGCCCTCTCCCATTTGCCCTCCTCTTCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR CCA 90 bp | TGCAATTGTGACGAAGGTCACAGCGGCCCTTCTCGCTTAGAGATAGGATGTCCACTTTCTTCCCCAGGCTaGCCCAAGCTTTTGGGACCG | + |
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Preference number: 4 (lower is better) Translates to: CNCDEGHSGPSRLEIGCPLSSPG*PKLLGP Trigger: CGGTCCCAAAAGCTTGGGCCAGCCTGGGGAAGAAAG...TGGACATCCTATCTCTAAGCGAGAAGGGCCGCTGTGACCTTCGTCACAATTGCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR TCA 90 bp | GGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACACTCCATGGAGATATGTCTaGGGTCCTGTACCTGAAGAT | + |
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Preference number: 4 (lower is better) Translates to: GLLGSRNPTKAKLPCKDTPWRYV*GPVPED Trigger: ATCTTCAGGTACAGGACCTCAGACATATCTCCATGG...AGTGTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR GCA 90 bp | ACCAACCGGCCTGAGCGGTTGCGCTGGAACTCCTTGACGATCACCATGTTTGTACAGAAGCCTGGGATATaGTGGATGATGAGGTCTCTG | + |
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Preference number: 4 (lower is better) Translates to: TNRPERLRWNSLTITMFVQKPGI*WMMRSL Trigger: CAGAGACCTCATCATCCAGCATATCCCAGGCTTCTG...TACAAACATGGTGATCGTCAAGGAGTTCCAGCGCAACCGCTCAGGCCGGTTGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
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| CDS-3UTR GCA 90 bp | CCCAGAAGTGCAATATGGGGCCGCACAGCCCTAGCTGAAGAGGAGGGCAAATGGCATCTTCATCATCACTaGCCTCATCTCCATTGTCAC | + |
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Preference number: 4 (lower is better) Translates to: PRSAIWGRTALAEEEGKWHLHHH*PHLHCH Trigger: GTGACAATGGAGATGAGGGCAGTGATGATGAAGATG...CCATTTGCCCTCCTCTTCAGCTAGGGCTGTGCGGCCCCATATTGCACTTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR CCA 90 bp | TGCAATTGTGACGAAGGTCACAGCGGCCCTTCTCGCTTAGAGATAGGATGTCCATCTCTCCGAGGCTGCTaGGCTCTGCAACCTGAAAGT | + |
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Preference number: 4 (lower is better) Translates to: CNCDEGHSGPSRLEIGCPSLRGC*ALQPES Trigger: ACTTTCAGGTTGCAGAGCCCAGCAGCCTCGGAGAGA...TGGACATCCTATCTCTAAGCGAGAAGGGCCGCTGTGACCTTCGTCACAATTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR CCA 90 bp | CCCAGAAGTGCAATATGGGGCCGCACAGCCCTAGCTGAAGAGGAGGGCAAATGGCATATAGTAGCGTACTaGGTTAACCCACAGGTCGTT | + |
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Preference number: 4 (lower is better) Translates to: PRSAIWGRTALAEEEGKWHIVAY*VNPQVV Trigger: AACGACCTGTGGGTTAACCCAGTACGCTACTATATG...CCATTTGCCCTCCTCTTCAGCTAGGGCTGTGCGGCCCCATATTGCACTTCTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR CCA 90 bp | GCGGGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACGGTATTCTTTTCCTCTaGGTCATCACTGTTGTCATC | + |
|
Preference number: 4 (lower is better) Translates to: AGLLGSRNPTKAKLPCKDGILFL*VITVVI Trigger: GATGACAACAGTGATGACCCAGAGGAAAAGAATACC...GTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCCCGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| 3UTR CAA 72 bp | GACACCAACCGGCCTGAGCGGTTGCGCTGGAACTCCTaGACGATCACCATGTTTGTAAAGTATGGGTTTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DTNRPERLRWNS*TITMFVKYGFV Trigger: GACAAACCCATACTTTACAAACATGGTGATCGTCAAGGAGTTCCAGCGCAACCGCTCAGGCCGGTTGGTGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
||
| CDS-3UTR TCA 90 bp | GGCGGGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGATGGTCTCATTGTCAGTaGTCTCATCAATTTCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: GGASGEQESHKGEAALQRWSHCQ*SHQFLR Trigger: TCTCAGAAATTGATGAGATCACTGACAATGAGACCA...TCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCCCGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR GCA 90 bp | CTGGAAGTACAGCTTCATTTTGTAGCCCATGGAGATATGTCTGAGGTCCTGTACCCAGGGCCTGCAGTATaGTCTCCATCCTCTGGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LEVQLHFVAHGDMSEVLYPGPAV*SPSSGH Trigger: GTGCCCAGAGGATGGAGAGCATACTGCAGGCCCTGG...GTACAGGACCTCAGACATATCTCCATGGGCTACAAAATGAAGCTGTACTTCCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
||
| CDS-3UTR GCA 90 bp | TGCAATTGTGACGAAGGTCACAGCGGCCCTTCTCGCTTAGAGATAGGATGTCCACCAGGTCCATTTGAATaGTCTCCAGGGCCTGCAGTA | + |
|
Preference number: 4 (lower is better) Translates to: CNCDEGHSGPSRLEIGCPPGPFE*SPGPAV Trigger: TACTGCAGGCCCTGGAGAGCATTCAAATGGACCTGG...TGGACATCCTATCTCTAAGCGAGAAGGGCCGCTGTGACCTTCGTCACAATTGCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR CCA 90 bp | GACCAAGGCATCACAATAAATAAGATTAGCAGCACACAGAAGCCTGCAGTGGAGGCTGGCCCAAGCTTTTaGGACCGGCAGCACTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: DQGITINKISSTQKPAVEAGPSF*DRQHFL Trigger: CAGGAAGTGCTGCCGGTCCCAAAAGCTTGGGCCAGC...CTCCACTGCAGGCTTCTGTGTGCTGCTAATCTTATTTATTGTGATGCCTTGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR TCA 90 bp | CTGAAGAGGAGGGCAAATGGGAGAGGGCATAGGGGTATATATAGAGAGCCCCTATCCCCCAGAGATTTCTaGAGATGGGAGCGTTTCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LKRRANGRGHRGIYREPLSPRDF*RWERFH Trigger: ATGGAAACGCTCCCATCTTCAGAAATCTCTGGGGGA...TAGGGGCTCTCTATATATACCCCTATGCCCTCTCCCATTTGCCCTCCTCTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR TCA 90 bp | GATATGTCTGAGGTCCTGTACCTGAAGATTGGTCAAGTAGCGGAAAATGTCTCTAGGCCTTGCCTGCCTTaGTGTTCACCGCCTCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DMSEVLYLKIGQVAENVSRPCLP*CSPPPG Trigger: ACCTGGAGGCGGTGAACATCAAGGCAGGCAAGGCCT...AGAGACATTTTCCGCTACTTGACCAATCTTCAGGTACAGGACCTCAGACATATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
||
| CDS-3UTR TCA 90 bp | GCGGGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACCATGAGCATCTTCCATaGTCACCATTTCATATTGAT | + |
|
Preference number: 4 (lower is better) Translates to: AGLLGSRNPTKAKLPCKDHEHLP*SPFHID Trigger: ATCAATATGAAATGGTGATCATGGAAGATGCTCATG...GTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCCCGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR GCA 90 bp | GGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACACTCTTTCCTTTCCGTGTTaGTTCTTTCTGCTTGATCTG | + |
|
Preference number: 4 (lower is better) Translates to: GLLGSRNPTKAKLPCKDTLSFPC*FFLLDL Trigger: CAGATCAAGCAGAAAGAAGCAACACGGAAAGGAAAG...AGTGTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR GCA 90 bp | CTGGAAGTACAGCTTCATTTTGTAGCCCATGGAGATATGTCTGAGGTCCTGTACCAAGAAGGCCTTGCCTaGCTTGATGTTCACCGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEVQLHFVAHGDMSEVLYQEGLA*LDVHRL Trigger: GAGGCGGTGAACATCAAGGCAGGCAAGGCCTTCTTG...GTACAGGACCTCAGACATATCTCCATGGGCTACAAAATGAAGCTGTACTTCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
||
| CDS-3UTR CCA 90 bp | TGCAATTGTGACGAAGGTCACAGCGGCCCTTCTCGCTTAGAGATAGGATGTCCAAAGGGCCTTCGCATCTaGATGAATTTGCGCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: CNCDEGHSGPSRLEIGCPKGLRI*MNLRLR Trigger: TCTCAAGCGCAAATTCATCCAGATGCGAAGGCCCTT...TGGACATCCTATCTCTAAGCGAGAAGGGCCGCTGTGACCTTCGTCACAATTGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR CCA 90 bp | GACCAAGGCATCACAATAAATAAGATTAGCAGCACACAGAAGCCTGCAGTGGAGAAGCCTGGGATATGCTaGATGATGAGGTCTCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DQGITINKISSTQKPAVEKPGIC*MMRSLR Trigger: GCGCAGAGACCTCATCATCCAGCATATCCCAGGCTT...CTCCACTGCAGGCTTCTGTGTGCTGCTAATCTTATTTATTGTGATGCCTTGGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR CCA 90 bp | GGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACACTGCATGTTTGTAAAGTATaGGTTTGTCTGGAAGTACAG | + |
|
Preference number: 4 (lower is better) Translates to: GFWGAGIPQRRSCLAKTLHVCKV*VCLEVQ Trigger: CTGTACTTCCAGACAAACCCATACTTTACAAACATG...CAGTGTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR CCA 90 bp | ATCACAATAAATAAGATTAGCAGCACACAGAAGCCTGCAGTGGAGGAGGGCCGACCGGTGCCAACGTATTaGGGTAGAATGAGACACCAA | + |
|
Preference number: 4 (lower is better) Translates to: ITINKISSTQKPAVEEGRPVPTY*GRMRHQ Trigger: TTGGTGTCTCATTCTACCCCAATACGTTGGCACCGG...TCGGCCCTCCTCCACTGCAGGCTTCTGTGTGCTGCTAATCTTATTTATTGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR CCA 90 bp | TGCAATTGTGACGAAGGTCACAGCGGCCCTTCTCGCTTAGAGATAGGATGTCCACTATCACTGCTGTCCTaGATATTAGTAACCTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: CNCDEGHSGPSRLEIGCPLSLLS*ILVTCW Trigger: CCAGCAGGTTACTAATATCCAGGACAGCAGTGATAG...TGGACATCCTATCTCTAAGCGAGAAGGGCCGCTGTGACCTTCGTCACAATTGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR TCA 90 bp | CTGGAAGTACAGCTTCATTTTGTAGCCCATGGAGATATGTCTGAGGTCCTGTACATGAGTGGAGTGCTTTaGCCCAGAAGCCTGGGATAT | + |
|
Preference number: 4 (lower is better) Translates to: LEVQLHFVAHGDMSEVLYMSGVL*PRSLGY Trigger: ATATCCCAGGCTTCTGGGTCAAAGCACTCCACTCAT...GTACAGGACCTCAGACATATCTCCATGGGCTACAAAATGAAGCTGTACTTCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
||
| CDS-3UTR CCA 90 bp | GATATGTCTGAGGTCCTGTACCTGAAGATTGGTCAAGTAGCGGAAAATGTCTCTAAGCCTGGGATATGCTaGATGATGAGGTCTCTGCGC | + |
|
Preference number: 4 (lower is better) Translates to: DMSEVLYLKIGQVAENVSKPGIC*MMRSLR Trigger: GCGCAGAGACCTCATCATCCAGCATATCCCAGGCTT...AGAGACATTTTCCGCTACTTGACCAATCTTCAGGTACAGGACCTCAGACATATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
||
| CDS-3UTR TCA 90 bp | ACTGGGTTAACCCACAGGTCGTTCTTGATGATCTCAGCAATTCTGTCAGCTTCTAAATTCTGGGGTGGTTaGGGAACTGATGAGTGGAGT | + |
|
Preference number: 4 (lower is better) Translates to: TGLTHRSFLMISAILSASKFWGG*GTDEWS Trigger: ACTCCACTCATCAGTTCCTCAACCACCCCAGAATTT...AGAAGCTGACAGAATTGCTGAGATCATCAAGAACGACCTGTGGGTTAACCCAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
||
| CDS-3UTR GCA 90 bp | TGCAATTGTGACGAAGGTCACAGCGGCCCTTCTCGCTTAGAGATAGGATGTCCAGAGAATGTCTTCAATTaGATAATGGTCATGAGCATC | + |
|
Preference number: 4 (lower is better) Translates to: CNCDEGHSGPSRLEIGCPENVFN*IMVMSI Trigger: GATGCTCATGACCATTATGCAATTGAAGACATTCTC...TGGACATCCTATCTCTAAGCGAGAAGGGCCGCTGTGACCTTCGTCACAATTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR CCA 90 bp | TGGGTTTGTCTGGAAGTACAGCTTCATTTTGTAGCCCATGGAGATATGTCTGAGAAGGGCCTTCGCATCTaGATGAATTTGCGCTTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: WVCLEVQLHFVAHGDMSEKGLRI*MNLRLR Trigger: TCTCAAGCGCAAATTCATCCAGATGCGAAGGCCCTT...CTCAGACATATCTCCATGGGCTACAAAATGAAGCTGTACTTCCAGACAAACCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
||
| 3UTR CAA 72 bp | TCTTGGCTCTTTCCTTTCCGTGTTGCTTCTTTCTGCTaGATCTGTAGCCACCTCGTCTCATATAGTAGCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SWLFPFRVASFC*ICSHLVSYSSV Trigger: TACGCTACTATATGAGACGAGGTGGCTACAGATCAAGCAGAAAGAAGCAACACGGAAAGGAAAGAGCCAAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
||
| CDS-3UTR TCA 90 bp | GACCAAGGCATCACAATAAATAAGATTAGCAGCACACAGAAGCCTGCAGTGGAGTTGGTTGATCAAGATTaGAATTCTGGGGTGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: DQGITINKISSTQKPAVELVDQD*NSGVVE Trigger: CTCAACCACCCCAGAATTTCAATCTTGATCAACCAA...CTCCACTGCAGGCTTCTGTGTGCTGCTAATCTTATTTATTGTGATGCCTTGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR TCA 90 bp | ACTGGGTTAACCCACAGGTCGTTCTTGATGATCTCAGCAATTCTGTCAGCTTCTTTGGTTGATCAAGATTaGAATTCTGGGGTGGTTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TGLTHRSFLMISAILSASLVDQD*NSGVVE Trigger: CTCAACCACCCCAGAATTTCAATCTTGATCAACCAA...AGAAGCTGACAGAATTGCTGAGATCATCAAGAACGACCTGTGGGTTAACCCAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
||
| CDS-3UTR TCA 90 bp | GACCAAGGCATCACAATAAATAAGATTAGCAGCACACAGAAGCCTGCAGTGGAGCTCTGTCACGTTGGTTaGTCAAGATTGAAATTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: DQGITINKISSTQKPAVELCHVG*SRLKFW Trigger: CCAGAATTTCAATCTTGATCAACCAACGTGACAGAG...CTCCACTGCAGGCTTCTGTGTGCTGCTAATCTTATTTATTGTGATGCCTTGGTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR TCA 90 bp | ATCACAATAAATAAGATTAGCAGCACACAGAAGCCTGCAGTGGAGGAGGGCCGATTTCTGAGATGTCACTaGGAATGTCTTCAATTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ITINKISSTQKPAVEEGRFLRCH*ECLQLH Trigger: ATGCAATTGAAGACATTCTCAGTGACATCTCAGAAA...TCGGCCCTCCTCCACTGCAGGCTTCTGTGTGCTGCTAATCTTATTTATTGTGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| 3UTR CAA 72 bp | ATGGTCATGAGCATCTTCCATGATCACCATTTCATATaGATTCTTGGCTCTTTCCTTTCCGTGTTGCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: MVMSIFHDHHFI*ILGSFLSVLLL Trigger: AAGAAGCAACACGGAAAGGAAAGAGCCAAGAATCAATATGAAATGGTGATCATGGAAGATGCTCATGACCAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
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| CDS-3UTR CAA 90 bp | GCGGGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACAACCGGCCTGAGCGGTaGCGCTGGAACTCCTTGACG | + |
|
Preference number: 5 (lower is better) Translates to: AGLLGSRNPTKAKLPCKDNRPER*RWNSLT Trigger: CGTCAAGGAGTTCCAGCGCAACCGCTCAGGCCGGTT...GTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCCCGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR CAA 90 bp | GGCGGGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACGCCTCCAGGTCCATTaGAATGCTCTCCAGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GGASGEQESHKGEAALQRRLQVH*NALQGL Trigger: CAGGCCCTGGAGAGCATTCAAATGGACCTGGAGGCG...TCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCCCGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR CAA 90 bp | CACAGAAGCCTGCAGTGGAGGAGGGCCGAAGGGGAGCGTGGTCCCTCCTCCAAACTGCCCTCATCTCCATaGTCACTATCACTGCTGTCC | + |
|
Preference number: 5 (lower is better) Translates to: HRSLQWRRAEGERGPSSKLPSSP*SLSLLS Trigger: GGACAGCAGTGATAGTGACAATGGAGATGAGGGCAG...TTTGGAGGAGGGACCACGCTCCCCTTCGGCCCTCCTCCACTGCAGGCTTCTGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR CAA 90 bp | CACAGAAGCCTGCAGTGGAGGAGGGCCGAAGGGGAGCGTGGTCCCTCCTCCAAATGGTTGAGGAATGCTTaGACCCAGAAGCCTGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: HRSLQWRRAEGERGPSSKWLRNA*TQKPGI Trigger: TATCCCAGGCTTCTGGGTCAAAGCATTCCTCAACCA...TTTGGAGGAGGGACCACGCTCCCCTTCGGCCCTCCTCCACTGCAGGCTTCTGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS TCA 90 bp | AAGAAGGCCTTGCCTGCCTTGATGTTCACCGCCTCCAGGTCCATTTaGATGCTCTCCAGGGCCTGCAGTATGCTCTCCATCCTCTGGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KKALPALMFTASRSI*MLSRACSMLSILWA Trigger: TGCCCAGAGGATGGAGAGCATACTGCAGGCCCTGGAGAGCATTCAAATGGACCTGGAGGCGGTGAACATCAAGGCAGGCAAGGCCTTCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044509.7 ENSMUST00000178165.2 |
||
| CDS-3UTR CAA 90 bp | GGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACACTGAGACGCAAGAAGGCCTaGCCTGCCTTGATGTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: GFWGAGIPQRRSCLAKTLRRKKA*PALMFT Trigger: GGTGAACATCAAGGCAGGCAAGGCCTTCTTGCGTCT...CAGTGTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR CAA 90 bp | GGCGGGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACGCATCTGGATGAATTaGCGCTTGAGACGCAAGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GGASGEQESHKGEAALQRRIWMN*RLRRKK Trigger: CTTCTTGCGTCTCAAGCGCAAATTCATCCAGATGCG...TCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCCCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR CAA 90 bp | GGCGGGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGAGAAATTCTGGGGTGGTaGAGGAATGCTTTGACCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GGASGEQESHKGEAALQREILGW*RNALTQ Trigger: CTGGGTCAAAGCATTCCTCAACCACCCCAGAATTTC...TCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCCCGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS TCA 90 bp | CTCTGCAACCTGAAAGTCAATTGCCAGGCTTCCCCCAGAGATTTCTaGAGATGGGAGCGTTTCCATGATCCCTGTGGAAGGGGCCTCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LCNLKVNCQASPRDF*RWERFHDPCGRGLP Trigger: GGGGAGGCCCCTTCCACAGGGATCATGGAAACGCTCCCATCTTCAGAAATCTCTGGGGGAAGCCTGGCAATTGACTTTCAGGTTGCAGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS TCA 90 bp | CAGGTTTCTAGGGCCTTCTCTCCGAGGCTGCTGGGCTCTGCAACCTaGAAGTCAATTGCCAGGCTTCCCCCAGAGATTTCTGAAGATGGG | + |
|
Preference number: 5 (lower is better) Translates to: QVSRAFSPRLLGSAT*KSIARLPPEISEDG Trigger: CCCATCTTCAGAAATCTCTGGGGGAAGCCTGGCAATTGACTTTCAGGTTGCAGAGCCCAGCAGCCTCGGAGAGAAGGCCCTAGAAACCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR CAA 90 bp | CCCAGAAGTGCAATATGGGGCCGCACAGCCCTAGCTGAAGAGGAGGGCAAATGGTCATCACTGCCCTCATaGTCCCCCTCATTACCATCA | + |
|
Preference number: 5 (lower is better) Translates to: PRSAIWGRTALAEEEGKWSSLPS*SPSLPS Trigger: TGATGGTAATGAGGGGGACAATGAGGGCAGTGATGA...CCATTTGCCCTCCTCTTCAGCTAGGGCTGTGCGGCCCCATATTGCACTTCTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR CAA 90 bp | GGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACACTGCGGTTATCCAGAGCCTaGTCAAAGACTTCAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: GFWGAGIPQRRSCLAKTLRLSRA*SKTSGP Trigger: TGGCCCTGAAGTCTTTGACAAGGCTCTGGATAACCG...CAGTGTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS CCA 90 bp | TGCTGGATGATGAGGTCTCTGCGCTCCAAAAAGGGCCTTCGCATCTaGATGAATTTGCGCTTGAGACGCAAGAAGGCCTTGCCTGCCTTG | + |
|
Preference number: 5 (lower is better) Translates to: CWMMRSLRSKKGLRI*MNLRLRRKKALPAL Trigger: CAAGGCAGGCAAGGCCTTCTTGCGTCTCAAGCGCAAATTCATCCAGATGCGAAGGCCCTTTTTGGAGCGCAGAGACCTCATCATCCAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044509.7 ENSMUST00000178165.2 |
||
| CDS-3UTR CAA 90 bp | CCCAGAAGTGCAATATGGGGCCGCACAGCCCTAGCTGAAGAGGAGGGCAAATGGTTGCGCTGGAACTCCTaGACGATCACCATGTTTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PRSAIWGRTALAEEEGKWLRWNS*TITMFV Trigger: TACAAACATGGTGATCGTCAAGGAGTTCCAGCGCAA...CCATTTGCCCTCCTCTTCAGCTAGGGCTGTGCGGCCCCATATTGCACTTCTGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR CAA 90 bp | GGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACACTGGCAACGCTCCCTTTGTaGTCAGTGATCTTGGTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GFWGAGIPQRRSCLAKTLATLPL*SVILVL Trigger: CAACACCAAGATCACTGACAACAAAGGGAGCGTTGC...CAGTGTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR CAA 90 bp | ACCAACCGGCCTGAGCGGTTGCGCTGGAACTCCTTGACGATCACCATGTTTGTAGATGAGTGGAGTGCTTaGACCCAGAAGCCTGGGATA | + |
|
Preference number: 5 (lower is better) Translates to: TNRPERLRWNSLTITMFVDEWSA*TQKPGI Trigger: TATCCCAGGCTTCTGGGTCAAAGCACTCCACTCATC...TACAAACATGGTGATCGTCAAGGAGTTCCAGCGCAACCGCTCAGGCCGGTTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
||
| CDS GCA 90 bp | TCGCATCTGGATGAATTTGCGCTTGAGACGCAAGAAGGCCTTGCCTaGCTTGATGTTCACCGCCTCCAGGTCCATTTGAATGCTCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: SHLDEFALETQEGLA*LDVHRLQVHLNALQ Trigger: CTGGAGAGCATTCAAATGGACCTGGAGGCGGTGAACATCAAGGCAGGCAAGGCCTTCTTGCGTCTCAAGCGCAAATTCATCCAGATGCGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044509.7 ENSMUST00000178165.2 |
||
| CDS-3UTR CAA 90 bp | CGGTTGCGCTGGAACTCCTTGACGATCACCATGTTTGTAAAGTATGGGTTTGTCCGCCTCCAGGTCCATTaGAATGCTCTCCAGGGCCTG | + |
|
Preference number: 5 (lower is better) Translates to: RLRWNSLTITMFVKYGFVRLQVH*NALQGL Trigger: CAGGCCCTGGAGAGCATTCAAATGGACCTGGAGGCG...GACAAACCCATACTTTACAAACATGGTGATCGTCAAGGAGTTCCAGCGCAACCG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
||
| CDS-3UTR CAA 90 bp | GACCAAGGCATCACAATAAATAAGATTAGCAGCACACAGAAGCCTGCAGTGGAGAAGGCCTTGCCTGCCTaGATGTTCACCGCCTCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: DQGITINKISSTQKPAVEKALPA*MFTASR Trigger: CCTGGAGGCGGTGAACATCAAGGCAGGCAAGGCCTT...CTCCACTGCAGGCTTCTGTGTGCTGCTAATCTTATTTATTGTGATGCCTTGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
||
| CDS-3UTR CAA 90 bp | ACTGGGTTAACCCACAGGTCGTTCTTGATGATCTCAGCAATTCTGTCAGCTTCTAGACGCAAGAAGGCCTaGCCTGCCTTGATGTTCACC | + |
|
Preference number: 5 (lower is better) Translates to: TGLTHRSFLMISAILSASRRKKA*PALMFT Trigger: GGTGAACATCAAGGCAGGCAAGGCCTTCTTGCGTCT...AGAAGCTGACAGAATTGCTGAGATCATCAAGAACGACCTGTGGGTTAACCCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
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| CDS-3UTR CAA 90 bp | GGGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACACTTCTCTGTCACGTTGGTaGATCAAGATTGAAATTCTG | + |
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Preference number: 5 (lower is better) Translates to: GLLGSRNPTKAKLPCKDTSLSRW*IKIEIL Trigger: CAGAATTTCAATCTTGATCAACCAACGTGACAGAGA...AGTGTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS TCA 90 bp | CACTGTTGTCATCTGGATTTGCGGCAACGCTCCCTTTGTTGTCAGTaGTCTTGGTGTTGTAGCCTTCACTGTGGTCAGGATTCTCACTGT | + |
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Preference number: 5 (lower is better) Translates to: HCCHLDLRQRSLCCQ*SWCCSLHCGQDSHC Trigger: ACAGTGAGAATCCTGACCACAGTGAAGGCTACAACACCAAGATCACTGACAACAAAGGGAGCGTTGCCGCAAATCCAGATGACAACAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR CAA 90 bp | ATCACAATAAATAAGATTAGCAGCACACAGAAGCCTGCAGTGGAGGAGGGCCGACTCCTCACACTCTCCTaGTCATCCTCATCCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: ITINKISSTQKPAVEEGRLLTLS*SSSSSS Trigger: AGATGAGGATGAGGATGACAAGGAGAGTGTGAGGAG...TCGGCCCTCCTCCACTGCAGGCTTCTGTGTGCTGCTAATCTTATTTATTGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR CAA 90 bp | GGCTTCTGGGGAGCAGGAATCCCACAAAGGCGAAGCTGCCTTGCAAAGACACTGGATCACCATTTCATATaGATTCTTGGCTCTTTCCTT | + |
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Preference number: 5 (lower is better) Translates to: GFWGAGIPQRRSCLAKTLDHHFI*ILGSFL Trigger: AAGGAAAGAGCCAAGAATCAATATGAAATGGTGATC...CAGTGTCTTTGCAAGGCAGCTTCGCCTTTGTGGGATTCCTGCTCCCCAGAAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR CAA 90 bp | ATCACAATAAATAAGATTAGCAGCACACAGAAGCCTGCAGTGGAGGAGGGCCGATCTGGGTCATCACTGTaGTCATCTGGATTTGCGGCA | + |
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Preference number: 5 (lower is better) Translates to: ITINKISSTQKPAVEEGRSGSSL*SSGFAA Trigger: TGCCGCAAATCCAGATGACAACAGTGATGACCCAGA...TCGGCCCTCCTCCACTGCAGGCTTCTGTGTGCTGCTAATCTTATTTATTGTGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR CAA 90 bp | GATTCTTGGCTCTTTCCTTTCCGTGTTGCTTCTTTCTGCTTGATCTGTAGCCACCTCCTCACACTCTCCTaGTCATCCTCATCCTCATCT | + |
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Preference number: 5 (lower is better) Translates to: DSWLFPFRVASFCLICSHLLTLS*SSSSSS Trigger: AGATGAGGATGAGGATGACAAGGAGAGTGTGAGGAG...GTGGCTACAGATCAAGCAGAAAGAAGCAACACGGAAAGGAAAGAGCCAAGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
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| CDS-3UTR CAA 90 bp | TGCAATTGTGACGAAGGTCACAGCGGCCCTTCTCGCTTAGAGATAGGATGTCCATCATCACTGCCCTCATaGTCATCATCATCATCATCA | + |
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Preference number: 5 (lower is better) Translates to: CNCDEGHSGPSRLEIGCPSSLPS*SSSSSS Trigger: TGATGATGATGATGATGACAATGAGGGCAGTGATGA...TGGACATCCTATCTCTAAGCGAGAAGGGCCGCTGTGACCTTCGTCACAATTGCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS TCA 90 bp | CTTCCTCACTGGTCTCTTCCTCTTCTTCAACTGAGTCTTCAGAGATaGGTTCTACCTCCTCCTCATAGTCATTCTGGTTGGTGCGGTTAT | + |
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Preference number: 5 (lower is better) Translates to: LPHWSLPLLQLSLQR*VLPPPHSHSGWCGY Trigger: ATAACCGCACCAACCAGAATGACTATGAGGAGGAGGTAGAACTCATCTCTGAAGACTCAGTTGAAGAAGAGGAAGAGACCAGTGAGGAAG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS CCA 90 bp | GGTTGTCACGTAGGGTTGTGTTATCACCATCAGCTTTCTCGCTGTTaGAATCCTCACTGTCATAGGTATTCTTTTCCTCTGGGTCATCAC | + |
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Preference number: 5 (lower is better) Translates to: GCHVGLCYHHQLSRC*NPHCHRYSFPLGHH Trigger: GTGATGACCCAGAGGAAAAGAATACCTATGACAGTGAGGATTCCAACAGCGAGAAAGCTGATGGTGATAACACAACCCTACGTGACAACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS-3UTR CAA 90 bp | TGGGTTTGTCTGGAAGTACAGCTTCATTTTGTAGCCCATGGAGATATGTCTGAGCGCATCTGGATGAATTaGCGCTTGAGACGCAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: WVCLEVQLHFVAHGDMSERIWMN*RLRRKK Trigger: CTTCTTGCGTCTCAAGCGCAAATTCATCCAGATGCG...CTCAGACATATCTCCATGGGCTACAAAATGAAGCTGTACTTCCAGACAAACCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000178165.2 |
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| CDS CCA 90 bp | TCATCATCACTGCCCTCATCTCCATTGTCACTATCACTGCTGTCCTaGATATTAGTAACCTGCTGGTTGTCACGTAGGGTTGTGTTATCA | + |
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Preference number: 5 (lower is better) Translates to: SSSLPSSPLSLSLLS*ILVTCWLSRRVVLS Trigger: TGATAACACAACCCTACGTGACAACCAGCAGGTTACTAATATCCAGGACAGCAGTGATAGTGACAATGGAGATGAGGGCAGTGATGATGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS TCA 90 bp | CTTGATGTCGTGAATGGTCTCATTGTCAGTGATCTCATCAATTTCTaGGATGTCACTGAGAATGTCTTCAATTGCATAATGGTCATGAGC | + |
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Preference number: 5 (lower is better) Translates to: LDVVNGLIVSDLINF*DVTENVFNCIMVMS Trigger: GCTCATGACCATTATGCAATTGAAGACATTCTCAGTGACATCTCAGAAATTGATGAGATCACTGACAATGAGACCATTCACGACATCAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS CCA 72 bp | GCAGCCTCGGTTTCTTCCTGGGGTCTCGGACGCTGCTaGGGTGGAGGCAGGGGCAGTCGCTGGAGCGGTGGG | + |
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Preference number: 6 (lower is better) Translates to: AASVSSWGLGRC*GGGRGSRWSGG Trigger: CCCACCGCTCCAGCGACTGCCCCTGCCTCCACCCCAGCAGCGTCCGAGACCCCAGGAAGAAACCGAGGCTGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS GCA 72 bp | TGGGCACTCCTCTCTCGGCTCTCCTTCGCCTTCCTCTaGTTCCTTCTCCTCCTCCTCCGACGCTGCCGCCTC | + |
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Preference number: 6 (lower is better) Translates to: WALLSRLSFAFL*FLLLLLRRCRL Trigger: GAGGCGGCAGCGTCGGAGGAGGAGGAGAAGGAAGCAGAGGAAGGCGAAGGAGAGCCGAGAGAGGAGTGCCCA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044509.7 ENSMUST00000178165.2 |
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| CDS CAA 90 bp | CAAGAAGGCCTTGCCTGCCTTGATGTTCACCGCCTCCAGGTCCATTaGAATGCTCTCCAGGGCCTGCAGTATGCTCTCCATCCTCTGGGC | + |
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Preference number: 6 (lower is better) Translates to: QEGLACLDVHRLQVH*NALQGLQYALHPLG Trigger: GCCCAGAGGATGGAGAGCATACTGCAGGCCCTGGAGAGCATTCAAATGGACCTGGAGGCGGTGAACATCAAGGCAGGCAAGGCCTTCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044509.7 ENSMUST00000178165.2 |
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| CDS CAA 90 bp | GGGCCTTCTCTCCGAGGCTGCTGGGCTCTGCAACCTGAAAGTCAATaGCCAGGCTTCCCCCAGAGATTTCTGAAGATGGGAGCGTTTCCA | + |
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Preference number: 6 (lower is better) Translates to: GPSLRGCWALQPESQ*PGFPQRFLKMGAFP Trigger: TGGAAACGCTCCCATCTTCAGAAATCTCTGGGGGAAGCCTGGCAATTGACTTTCAGGTTGCAGAGCCCAGCAGCCTCGGAGAGAAGGCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS TCA 72 bp | AGGGCCTTCTCTCCGAGGCTGCTGGGCTCTGCAACCTaGAAGTCAATTGCCAGGCTTCCCCCAGAGATTTCT | + |
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Preference number: 6 (lower is better) Translates to: RAFSPRLLGSAT*KSIARLPPEIS Trigger: AGAAATCTCTGGGGGAAGCCTGGCAATTGACTTTCAGGTTGCAGAGCCCAGCAGCCTCGGAGAGAAGGCCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS CAA 90 bp | TCTCTGCGCTCCAAAAAGGGCCTTCGCATCTGGATGAATTTGCGCTaGAGACGCAAGAAGGCCTTGCCTGCCTTGATGTTCACCGCCTCC | + |
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Preference number: 6 (lower is better) Translates to: SLRSKKGLRIWMNLR*RRKKALPALMFTAS Trigger: GGAGGCGGTGAACATCAAGGCAGGCAAGGCCTTCTTGCGTCTCAAGCGCAAATTCATCCAGATGCGAAGGCCCTTTTTGGAGCGCAGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044509.7 ENSMUST00000178165.2 |
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| CDS TCA 72 bp | TTGCCTGCCTTGATGTTCACCGCCTCCAGGTCCATTTaGATGCTCTCCAGGGCCTGCAGTATGCTCTCCATC | + |
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Preference number: 6 (lower is better) Translates to: LPALMFTASRSI*MLSRACSMLSI Trigger: GATGGAGAGCATACTGCAGGCCCTGGAGAGCATTCAAATGGACCTGGAGGCGGTGAACATCAAGGCAGGCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044509.7 ENSMUST00000178165.2 |
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| CDS CAA 72 bp | CTCCGAGGCTGCTGGGCTCTGCAACCTGAAAGTCAATaGCCAGGCTTCCCCCAGAGATTTCTGAAGATGGGA | + |
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Preference number: 6 (lower is better) Translates to: LRGCWALQPESQ*PGFPQRFLKMG Trigger: TCCCATCTTCAGAAATCTCTGGGGGAAGCCTGGCAATTGACTTTCAGGTTGCAGAGCCCAGCAGCCTCGGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS CAA 72 bp | CTTGCCTGCCTTGATGTTCACCGCCTCCAGGTCCATTaGAATGCTCTCCAGGGCCTGCAGTATGCTCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: LACLDVHRLQVH*NALQGLQYALH Trigger: ATGGAGAGCATACTGCAGGCCCTGGAGAGCATTCAAATGGACCTGGAGGCGGTGAACATCAAGGCAGGCAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044509.7 ENSMUST00000178165.2 |
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| CDS CAA 72 bp | CTGCGCTCCAAAAAGGGCCTTCGCATCTGGATGAATTaGCGCTTGAGACGCAAGAAGGCCTTGCCTGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: LRSKKGLRIWMN*RLRRKKALPAL Trigger: CAAGGCAGGCAAGGCCTTCTTGCGTCTCAAGCGCAAATTCATCCAGATGCGAAGGCCCTTTTTGGAGCGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044509.7 ENSMUST00000178165.2 |
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| CDS CAA 90 bp | ATGAGGTCTCTGCGCTCCAAAAAGGGCCTTCGCATCTGGATGAATTaGCGCTTGAGACGCAAGAAGGCCTTGCCTGCCTTGATGTTCACC | + |
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Preference number: 6 (lower is better) Translates to: MRSLRSKKGLRIWMN*RLRRKKALPALMFT Trigger: GGTGAACATCAAGGCAGGCAAGGCCTTCTTGCGTCTCAAGCGCAAATTCATCCAGATGCGAAGGCCCTTTTTGGAGCGCAGAGACCTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044509.7 ENSMUST00000178165.2 |
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| CDS CCA 72 bp | ATGAGGTCTCTGCGCTCCAAAAAGGGCCTTCGCATCTaGATGAATTTGCGCTTGAGACGCAAGAAGGCCTTG | + |
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Preference number: 6 (lower is better) Translates to: MRSLRSKKGLRI*MNLRLRRKKAL Trigger: CAAGGCCTTCTTGCGTCTCAAGCGCAAATTCATCCAGATGCGAAGGCCCTTTTTGGAGCGCAGAGACCTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044509.7 ENSMUST00000178165.2 |
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| CDS CAA 72 bp | ATCTGGATGAATTTGCGCTTGAGACGCAAGAAGGCCTaGCCTGCCTTGATGTTCACCGCCTCCAGGTCCATT | + |
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Preference number: 6 (lower is better) Translates to: IWMNLRLRRKKA*PALMFTASRSI Trigger: AATGGACCTGGAGGCGGTGAACATCAAGGCAGGCAAGGCCTTCTTGCGTCTCAAGCGCAAATTCATCCAGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044509.7 ENSMUST00000178165.2 |
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| CDS TCA 72 bp | CTGAAAGTCAATTGCCAGGCTTCCCCCAGAGATTTCTaGAGATGGGAGCGTTTCCATGATCCCTGTGGAAGG | + |
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Preference number: 6 (lower is better) Translates to: LKVNCQASPRDF*RWERFHDPCGR Trigger: CCTTCCACAGGGATCATGGAAACGCTCCCATCTTCAGAAATCTCTGGGGGAAGCCTGGCAATTGACTTTCAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS GCA 72 bp | GATGAATTTGCGCTTGAGACGCAAGAAGGCCTTGCCTaGCTTGATGTTCACCGCCTCCAGGTCCATTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: DEFALETQEGLA*LDVHRLQVHLN Trigger: ATTCAAATGGACCTGGAGGCGGTGAACATCAAGGCAGGCAAGGCCTTCTTGCGTCTCAAGCGCAAATTCATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000044509.7 ENSMUST00000178165.2 |
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| CDS CAA 72 bp | TCCAAAAAGGGCCTTCGCATCTGGATGAATTTGCGCTaGAGACGCAAGAAGGCCTTGCCTGCCTTGATGTTC | + |
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Preference number: 6 (lower is better) Translates to: SKKGLRIWMNLR*RRKKALPALMF Trigger: GAACATCAAGGCAGGCAAGGCCTTCTTGCGTCTCAAGCGCAAATTCATCCAGATGCGAAGGCCCTTTTTGGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000044509.7 ENSMUST00000178165.2 |
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| CDS TCA 72 bp | CATCTGGATTTGCGGCAACGCTCCCTTTGTTGTCAGTaGTCTTGGTGTTGTAGCCTTCACTGTGGTCAGGAT | + |
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Preference number: 6 (lower is better) Translates to: HLDLRQRSLCCQ*SWCCSLHCGQD Trigger: ATCCTGACCACAGTGAAGGCTACAACACCAAGATCACTGACAACAAAGGGAGCGTTGCCGCAAATCCAGATG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS CCA 72 bp | CATAGCTGTCCTCACTTAGCTGGCTGGCTTCCTCACTaGTCTCTTCCTCTTCTTCAACTGAGTCTTCAGAGA | + |
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Preference number: 6 (lower is better) Translates to: HSCPHLAGWLPH*SLPLLQLSLQR Trigger: TCTCTGAAGACTCAGTTGAAGAAGAGGAAGAGACCAGTGAGGAAGCCAGCCAGCTAAGTGAGGACAGCTATG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS CCA 72 bp | TTCGCTCATCTTCATAGCTGTCCTCACTTAGCTGGCTaGCTTCCTCACTGGTCTCTTCCTCTTCTTCAACTG | + |
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Preference number: 6 (lower is better) Translates to: FAHLHSCPHLAG*LPHWSLPLLQL Trigger: CAGTTGAAGAAGAGGAAGAGACCAGTGAGGAAGCCAGCCAGCTAAGTGAGGACAGCTATGAAGATGAGCGAA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS CAA 72 bp | CTGTGGTCAGGATTCTCACTGTCGCACAGGTTCTCATaGGCATCGGTCACCTCATTATCAGTAGTCTCGAAG | + |
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Preference number: 6 (lower is better) Translates to: LWSGFSLSHRFS*ASVTSLSVVSK Trigger: CTTCGAGACTACTGATAATGAGGTGACCGATGCCAATGAGAACCTGTGCGACAGTGAGAATCCTGACCACAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS GCA 72 bp | CTTTTCCTCTGGGTCATCACTGTTGTCATCTGGATTTaGGGCAACGCTCCCTTTGTTGTCAGTGATCTTGGT | + |
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Preference number: 6 (lower is better) Translates to: LFLWVITVVIWI*GNAPFVVSDLG Trigger: ACCAAGATCACTGACAACAAAGGGAGCGTTGCCGCAAATCCAGATGACAACAGTGATGACCCAGAGGAAAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS CCA 72 bp | CTGCCCTCATCTCCATTGTCACTATCACTGCTGTCCTaGATATTAGTAACCTGCTGGTTGTCACGTAGGGTT | + |
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Preference number: 6 (lower is better) Translates to: LPSSPLSLSLLS*ILVTCWLSRRV Trigger: AACCCTACGTGACAACCAGCAGGTTACTAATATCCAGGACAGCAGTGATAGTGACAATGGAGATGAGGGCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS CAA 90 bp | CCATTGTCACTATCACTGCTGTCCTGGATATTAGTAACCTGCTGGTaGTCACGTAGGGTTGTGTTATCACCATCAGCTTTCTCGCTGTTG | + |
|
Preference number: 6 (lower is better) Translates to: PLSLSLLSWILVTCW*SRRVVLSPSAFSLL Trigger: CAACAGCGAGAAAGCTGATGGTGATAACACAACCCTACGTGACAACCAGCAGGTTACTAATATCCAGGACAGCAGTGATAGTGACAATGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS TCA 72 bp | GCGGAAAATGTCTCTGTCACGTTGGTTGATCAAGATTaGAATTCTGGGGTGGTTGAGGAATGCTTTGACCCA | + |
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Preference number: 6 (lower is better) Translates to: AENVSVTLVDQD*NSGVVEECFDP Trigger: TGGGTCAAAGCATTCCTCAACCACCCCAGAATTTCAATCTTGATCAACCAACGTGACAGAGACATTTTCCGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS GCA 72 bp | CATCACTGCCCTCATTGTCATCATCATCATCATCACTaGCCTCATTGTCCCCCTCATTACCATCATCATCTT | + |
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Preference number: 6 (lower is better) Translates to: HHCPHCHHHHHH*PHCPPHYHHHL Trigger: AAGATGATGATGGTAATGAGGGGGACAATGAGGGCAGTGATGATGATGATGATGACAATGAGGGCAGTGATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS CCA 72 bp | TCACTATCACTGCTGTCCTGGATATTAGTAACCTGCTaGTTGTCACGTAGGGTTGTGTTATCACCATCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLSLLSWILVTC*LSRRVVLSPSA Trigger: AGCTGATGGTGATAACACAACCCTACGTGACAACCAGCAGGTTACTAATATCCAGGACAGCAGTGATAGTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS CAA 72 bp | CTATCACTGCTGTCCTGGATATTAGTAACCTGCTGGTaGTCACGTAGGGTTGTGTTATCACCATCAGCTTTC | + |
|
Preference number: 6 (lower is better) Translates to: LSLLSWILVTCW*SRRVVLSPSAF Trigger: GAAAGCTGATGGTGATAACACAACCCTACGTGACAACCAGCAGGTTACTAATATCCAGGACAGCAGTGATAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS CCA 72 bp | GTAGGGTTGTGTTATCACCATCAGCTTTCTCGCTGTTaGAATCCTCACTGTCATAGGTATTCTTTTCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VGLCYHHQLSRC*NPHCHRYSFPL Trigger: CAGAGGAAAAGAATACCTATGACAGTGAGGATTCCAACAGCGAGAAAGCTGATGGTGATAACACAACCCTAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS CAA 72 bp | TATCTAATGTCCCTGTCATCATCATCACTGCCCTCATaGTCATCATCATCATCATCACTGCCCTCATTGTCC | + |
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Preference number: 6 (lower is better) Translates to: YLMSLSSSSLPS*SSSSSSLPSLS Trigger: GGACAATGAGGGCAGTGATGATGATGATGATGACAATGAGGGCAGTGATGATGATGACAGGGACATTAGATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS TCA 72 bp | TCGGTGGTCTCCATGAAGTCAGAGATCTTGATGTCGTaGATGGTCTCATTGTCAGTGATCTCATCAATTTCT | + |
|
Preference number: 6 (lower is better) Translates to: SVVSMKSEILMS*MVSLSVISSIS Trigger: AGAAATTGATGAGATCACTGACAATGAGACCATTCACGACATCAAGATCTCTGACTTCATGGAGACCACCGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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| CDS TCA 72 bp | GTGAATGGTCTCATTGTCAGTGATCTCATCAATTTCTaGGATGTCACTGAGAATGTCTTCAATTGCATAATG | + |
|
Preference number: 6 (lower is better) Translates to: VNGLIVSDLINF*DVTENVFNCIM Trigger: CATTATGCAATTGAAGACATTCTCAGTGACATCTCAGAAATTGATGAGATCACTGACAATGAGACCATTCAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044509.7 |
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