Pregenerated sensors for TSPOAP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034156Ensembl transcript IDs: ENSMUST00000039627.12, ENSMUST00000100644.10, ENSMUST00000133645.2, ENSMUST00000142329.8, ENSMUST00000144502.8
Found 634 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCAGCCAGTaGGTTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGC | + |
|
Preference number: 1 (lower is better) Translates to: PVCSEIRSWVSLSSQ*VDPGPLLSAGQTDG Trigger: GCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR CCA 90 bp | TTTGGTCCTGGAGGAACTTCCAGAGCTGAGGGCACAGTGCCAGCCTaGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCATGTCT | + |
|
Preference number: 1 (lower is better) Translates to: FGPGGTSRAEGTVPA*GHWRPLYGDSGVMS Trigger: AGACATGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCCCTCAGCTCTGGAAGTTCCTCCAGGACCAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR TCA 90 bp | CTTTGCTTTGGCGAGGAGACCCTGCTTCTTCTCAGCTATGCTCTGTaGCTCCCCCAGTTTGGTCCTGGAGGAACTTCCAGAGCTGAGGGC | + |
|
Preference number: 1 (lower is better) Translates to: LCFGEETLLLLSYAL*LPQFGPGGTSRAEG Trigger: GCCCTCAGCTCTGGAAGTTCCTCCAGGACCAAACTGGGGGAGTCACAGAGCATAGCTGAGAAGAAGCAGGGTCTCCTCGCCAAAGCAAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR TCA 90 bp | GGACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTaGGAAGTTCCTTTGCTTTGGCGAGGAGACCCTGCTTCTTCTCAG | + |
|
Preference number: 1 (lower is better) Translates to: GQTDGSLSLSWSPAF*EVPLLWRGDPASSQ Trigger: CTGAGAAGAAGCAGGGTCTCCTCGCCAAAGCAAAGGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR TCA 90 bp | ATCCAGAGGCGTGGGTCCAGTCCTGATCTGACAGTGCTTGGTGCTTaGTTACTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCT | + |
|
Preference number: 1 (lower is better) Translates to: IQRRGSSPDLTVLGA*LLTLGLSSLWKSPS Trigger: AGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAGTAATCAAGCACCAAGCACTGTCAGATCAGGACTGGACCCACGCCTCTGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR GCA 90 bp | GAAGTTCCTTTGCTTTGGCGAGGAGACCCTGCTTCTTCTCAGCTATaGTCTGTGACTCCCCCAGTTTGGTCCTGGAGGAACTTCCAGAGC | + |
|
Preference number: 1 (lower is better) Translates to: EVPLLWRGDPASSQL*SVTPPVWSWRNFQS Trigger: GCTCTGGAAGTTCCTCCAGGACCAAACTGGGGGAGTCACAGAGCATAGCTGAGAAGAAGCAGGGTCTCCTCGCCAAAGCAAAGGAACTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR GCA 90 bp | GAGCCCAGCCTTTTGAGAAGTTCCTTTGCTTTGGCGAGGAGACCCTaGTTCTTCTCAGCTATGCTCTGTGACTCCCCCAGTTTGGTCCTG | + |
|
Preference number: 1 (lower is better) Translates to: EPSLLRSSFALARRP*FFSAMLCDSPSLVL Trigger: CAGGACCAAACTGGGGGAGTCACAGAGCATAGCTGAGAAGAAGCAGGGTCTCCTCGCCAAAGCAAAGGAACTTCTCAAAAGGCTGGGCTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR TCA 90 bp | ATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTaGCAGTGCTTGGTGCTTGATTACTTACTCTGGGGCTCAGTTCCC | + |
|
Preference number: 1 (lower is better) Translates to: MRTDWESRGVGPVLI*QCLVLDYLLWGSVP Trigger: GGGAACTGAGCCCCAGAGTAAGTAATCAAGCACCAAGCACTGTCAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGAGGCCCGCTTTGGCATaGCCTTTCTCCTCCCCTGGC | + |
|
Preference number: 2 (lower is better) Translates to: SAPWSPGSERMGSHRGQVRPALA*PFSSPG Trigger: GCCAGGGGAGGAGAAAGGCCATGCCAAAGCGGGCCT...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGGTCCAGCCAGTGAGTTaGTCCAGGGCCACTTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: GPLGLRGWDHTEARWPGQVQPVS*SRATSV Trigger: GACAGAAGTGGCCCTGGATCAACTCACTGGCTGGAC...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGAGCAGAGGGAGGACCTaGACTGAGGCACTGAGTATG | + |
|
Preference number: 2 (lower is better) Translates to: GPLGLRGWDHTEARWPGQSRGRT*TEALSM Trigger: CATACTCAGTGCCTCAGTCCAGGTCCTCCCTCTGCT...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGAGGGAGGACCTGGACTaGGGCACTGAGTATGTACAT | + |
|
Preference number: 2 (lower is better) Translates to: GPLGLRGWDHTEARWPGQREDLD*GTEYVH Trigger: ATGTACATACTCAGTGCCTCAGTCCAGGTCCTCCCT...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGGTCCAGTCCTGATCTaGCAGTGCTTGGTGCTTGAT | + |
|
Preference number: 2 (lower is better) Translates to: SAPWSPGSERMGSHRGQVGPVLI*QCLVLD Trigger: ATCAAGCACCAAGCACTGTCAGATCAGGACTGGACC...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAACCCTGGCCTGTGCGGTaGAGCAGAGGGAGGACCTGG | + |
|
Preference number: 2 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKPWPVR*SRGRTW Trigger: CCAGGTCCTCCCTCTGCTTCACCGCACAGGCCAGGG...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCAGGAACTTCCAGAGCTaGGGGCACAGTGCCAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSRNFQS*GHSASL Trigger: CAGGCTGGCACTGTGCCCTCAGCTCTGGAAGTTCCT...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTAGGAACTTCCAGAGCTaGGGGCACAGTGCCAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: LIQGHFCLQDRRTAASVFRNFQS*GHSASL Trigger: CAGGCTGGCACTGTGCCCTCAGCTCTGGAAGTTCCT...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCCTCAGCTATGCTCTGTaGCTCCCCCAGTTTGGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSLSYAL*LPQFGP Trigger: AGGACCAAACTGGGGGAGTCACAGAGCATAGCTGAG...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGCGCCCAGACAAGGGGTaGAGGATGGGATGGTTAGAG | + |
|
Preference number: 2 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKRPDKG*RMGWLE Trigger: CTCTAACCATCCCATCCTTCACCCCTTGTCTGGGCG...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCCCAGCCTGGGGGCACTaGAGGCCCTTGTATGGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSPAWGH*RPLYGD Trigger: ATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGG...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCAGCCTGGGGGCACTaGAGGCCCTTGTATGGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: LIQGHFCLQDRRTAASVFPAWGH*RPLYGD Trigger: ATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGG...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTACCTCACCAGGTCCCCTaGGCTCCTTTGAGTGCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: GAGKAKKGPTERGSKAGVPHQVP*APLSAS Trigger: ACTGGCACTCAAAGGAGCCCAGGGGACCTGGTGAGG...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR CAA 90 bp | AGGAGACCCTGCTTCTTCTCAGCTATGCTCTGTGACTCCCCCAGTTaGGTCCTGGAGGAACTTCCAGAGCTGAGGGCACAGTGCCAGCCT | + |
|
Preference number: 2 (lower is better) Translates to: RRPCFFSAMLCDSPS*VLEELPELRAQCQP Trigger: AGGCTGGCACTGTGCCCTCAGCTCTGGAAGTTCCTCCAGGACCAAACTGGGGGAGTCACAGAGCATAGCTGAGAAGAAGCAGGGTCTCCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR CAA 90 bp | AGAGCCATCGTTAGAGTGGTCCCTATCTCCACCCAGGGCCTATCCTaGGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCA | + |
|
Preference number: 2 (lower is better) Translates to: RAIVRVVPISTQGLS*EQGRPRRDLQSVVA Trigger: TGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCCAAGGATAGGCCCTGGGTGGAGATAGGGACCACTCTAACGATGGCTCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGCAAAGCAGGAGTAGATaGGAACAGACTGGGAATCCA | + |
|
Preference number: 2 (lower is better) Translates to: SAPWSPGSERMGSHRGQVQSRSR*EQTGNP Trigger: TGGATTCCCAGTCTGTTCTCATCTACTCCTGCTTTG...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGCCTGGACTGAGGCACTaGGTATGTACATATATACAC | + |
|
Preference number: 2 (lower is better) Translates to: GPLGLRGWDHTEARWPGQPGLRH*VCTYIH Trigger: GTGTATATATGTACATACTCAGTGCCTCAGTCCAGG...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR GCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGTCTGACAGTGCTTGGTaGTTGATTACTTACTCTGGG | + |
|
Preference number: 2 (lower is better) Translates to: GPLGLRGWDHTEARWPGQSDSAW*LITYSG Trigger: CCCAGAGTAAGTAATCAAGCACCAAGCACTGTCAGA...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAACCAACTCCTGCTTTCTaGCCCCTGGTCCCCTGGGTC | + |
|
Preference number: 2 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKPTPAF*PLVPWV Trigger: GACCCAGGGGACCAGGGGGCAGAAAGCAGGAGTTGG...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGGTGACTCCCCCAGTTTaGTCCTGGAGGAACTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKVTPPV*SWRNFQ Trigger: CTGGAAGTTCCTCCAGGACCAAACTGGGGGAGTCAC...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAAGGAACTTCCAGAGCTaGGGGCACAGTGCCAGCCTG | + |
|
Preference number: 2 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKRNFQS*GHSASL Trigger: CAGGCTGGCACTGTGCCCTCAGCTCTGGAAGTTCCT...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCCTCAGCTATGCTCTGTaGCTCCCCCAGTTTGGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSLSYAL*LPQFGP Trigger: AGGACCAAACTGGGGGAGTCACAGAGCATAGCTGAG...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTaGGAAGTTCCTTTGCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSWSPAF*EVPLLW Trigger: CCAAAGCAAAGGAACTTCTCAAAAGGCTGGGCTCCA...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGGTCCAGCCAGTGAGTTaGTCCAGGGCCACTTCTGTC | + |
|
Preference number: 2 (lower is better) Translates to: GVDENRLGIQRRGSSPDLVQPVS*SRATSV Trigger: GACAGAAGTGGCCCTGGATCAACTCACTGGCTGGAC...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAATCCCCTGGGCTCCTTTaGGTGCCAGTCTGCTCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKSPGLL*VPVCSE Trigger: CTCTGAGCAGACTGGCACTCAAAGGAGCCCAGGGGA...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTGTGACTCCCCCAGTTTaGTCCTGGAGGAACTTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LIQGHFCLQDRRTAASVFVTPPV*SWRNFQ Trigger: CTGGAAGTTCCTCCAGGACCAAACTGGGGGAGTCAC...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR CAA 90 bp | AGGACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTaGAGAAGTTCCTTTGCTTTGGCGAGGAGACCCTGCTTCTTCTCA | + |
|
Preference number: 2 (lower is better) Translates to: RTDGRQPQSFLEPSL*RSSFALARRPCFFS Trigger: TGAGAAGAAGCAGGGTCTCCTCGCCAAAGCAAAGGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGTCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTTCAGAGATCAGGAGTTaGGTTTCCCTGTCCAGCCAG | + |
|
Preference number: 2 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGSEIRS*VSLSSQ Trigger: CTGGCTGGACAGGGAAACCCAACTCCTGATCTCTGA...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAACCCAGGGCCTATCCTTaGAGCAGGGAAGGCCAAGAA | + |
|
Preference number: 2 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKPRAYP*SREGQE Trigger: TTCTTGGCCTTCCCTGCTCCAAGGATAGGCCCTGGG...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAACTTTCCCTCAGCCCCTaGACCCAACAGGGACTGGAA | + |
|
Preference number: 2 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKLSLSP*TQQGLE Trigger: TTCCAGTCCCTGTTGGGTCCAGGGGCTGAGGGAAAG...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTATGGAGCCCAGCCTTTTaGGAAGTTCCTTTGCTTTGG | + |
|
Preference number: 2 (lower is better) Translates to: GAGKAKKGPTERGSKAGVWSPAF*EVPLLW Trigger: CCAAAGCAAAGGAACTTCTCAAAAGGCTGGGCTCCA...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTGAAGTTCCTTTGCTTTaGCGAGGAGACCCTGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: LIQGHFCLQDRRTAASVFEVPLL*RGDPAS Trigger: AGAAGCAGGGTCTCCTCGCCAAAGCAAAGGAACTTC...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAAGCAGAGGGAGGACCTaGACTGAGGCACTGAGTATG | + |
|
Preference number: 2 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKSRGRT*TEALSM Trigger: CATACTCAGTGCCTCAGTCCAGGTCCTCCCTCTGCT...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR TCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAAGGGAGGACCTGGACTaGGGCACTGAGTATGTACAT | + |
|
Preference number: 2 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKREDLD*GTEYVH Trigger: ATGTACATACTCAGTGCCTCAGTCCAGGTCCTCCCT...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR GCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCTCCTCCCCTGGCCTGTaGGGTGAAGCAGAGGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPSSPGL*GEAEGG Trigger: TCCTCCCTCTGCTTCACCGCACAGGCCAGGGGAGGA...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGGAAGTTCCTTTGCTTTaGCGAGGAGACCCTGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: GVDENRLGIQRRGSSPDLEVPLL*RGDPAS Trigger: AGAAGCAGGGTCTCCTCGCCAAAGCAAAGGAACTTC...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTACTTGATTACTTACTCTaGGGCTCAGTTCCCTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: GAGKAKKGPTERGSKAGVLDYLL*GSVPSG Trigger: TCCAGAGGGAACTGAGCCCCAGAGTAAGTAATCAAG...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCCCAGCCTGGGGGCACTaGAGGCCCTTGTATGGTGAT | + |
|
Preference number: 2 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPPAWGH*RPLYGD Trigger: ATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGG...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 52% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR GCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGATGTATGAAAATAGCTaGATAAATCCGTCCTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKMYENS*INPSFP Trigger: GGGAAAGGACGGATTTATGCAGCTATTTTCATACAT...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAATGTATGAAAATAGCTaGATAAATCCGTCCTTTCCC | + |
|
Preference number: 2 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKMYENS*INPSFP Trigger: GGGAAAGGACGGATTTATGCAGCTATTTTCATACAT...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCGAAGTTCCTTTGCTTTaGCGAGGAGACCCTGCTTCT | + |
|
Preference number: 2 (lower is better) Translates to: SEQGMYENSCINPSFPSAEVPLL*RGDPAS Trigger: AGAAGCAGGGTCTCCTCGCCAAAGCAAAGGAACTTC...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCCTTGATTACTTACTCTaGGGCTCAGTTCCCTCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPLDYLL*GSVPSG Trigger: TCCAGAGGGAACTGAGCCCCAGAGTAAGTAATCAAG...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR CAA 90 bp | CCCTGGACCCAACAGGGACTGGAAGAAAATGATGCAAGAGAGAAGTaGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCT | + |
|
Preference number: 2 (lower is better) Translates to: PWTQQGLEENDAREK*NPMSKIRQTQLLLS Trigger: AGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTTCTCTCTTGCATCATTTTCTTCCAGTCCCTGTTGGGTCCAGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR CCA 72 bp | GGCCAGGTGGCCTGGGCAGGGAGGGGTGGAGCACTATaGGGCGGGGTCAGGCCCGCTTTGGCATGGCCTTTC | + |
|
Preference number: 3 (lower is better) Translates to: GQVAWAGRGGAL*GGVRPALAWPF Trigger: GAAAGGCCATGCCAAAGCGGGCCTGACCCCGCCCCATAGTGCTCCACCCCTCCCTGCCCAGGCCACCTGGCC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CAA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGGTCCCCTGGGCTCCTTaGAGTGCCAGTCTGCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GPLGLRGWDHTEARWPGQVPWAP*SASLLR Trigger: TCTGAGCAGACTGGCACTCAAAGGAGCCCAGGGGAC...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR CCA 72 bp | TCCAGAGCTGAGGGCACAGTGCCAGCCTGGGGGCACTaGAGGCCCTTGTATGGTGATTCTGGGGTCATGTCT | + |
|
Preference number: 3 (lower is better) Translates to: SRAEGTVPAWGH*RPLYGDSGVMS Trigger: AGACATGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCCCTCAGCTCTGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTGTCCCCTGGGCTCCTTaGAGTGCCAGTCTGCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGVPWAP*SASLLR Trigger: TCTGAGCAGACTGGCACTCAAAGGAGCCCAGGGGAC...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGTGTCCAGCCAGTGAGTaGATCCAGGGCCACTTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKCPASE*IQGHFC Trigger: ACAGAAGTGGCCCTGGATCAACTCACTGGCTGGACA...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAACCCAGGGCCTATCCTaGGAGCAGGGAAGGCCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKTQGLS*EQGRPR Trigger: TCTTGGCCTTCCCTGCTCCAAGGATAGGCCCTGGGT...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR TCA 72 bp | GACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTaGGAAGTTCCTTTGCTTTGGCGAGGAGACCCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: DGSLSLSWSPAF*EVPLLWRGDPA Trigger: AGCAGGGTCTCCTCGCCAAAGCAAAGGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR TCA 72 bp | GATCAGGAGTTGGGTTTCCCTGTCCAGCCAGTGAGTTaGTCCAGGGCCACTTCTGTCTGCAGGACAGACGGA | + |
|
Preference number: 3 (lower is better) Translates to: DQELGFPVQPVS*SRATSVCRTDG Trigger: TCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGGACAGGGAAACCCAACTCCTGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CAA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTCTCAGAGATCAGGAGTaGGGTTTCCCTGTCCAGCCA | + |
|
Preference number: 3 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTLRDQE*GFPVQP Trigger: TGGCTGGACAGGGAAACCCAACTCCTGATCTCTGAG...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR TCA 72 bp | TCAGAGATCAGGAGTTGGGTTTCCCTGTCCAGCCAGTaGGTTGATCCAGGGCCACTTCTGTCTGCAGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: SEIRSWVSLSSQ*VDPGPLLSAGQ Trigger: CTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGGACAGGGAAACCCAACTCCTGATCTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR TCA 72 bp | GACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTaGCAGTGCTTGGTGCTTGATTACTTACTCTGGGGC | + |
|
Preference number: 3 (lower is better) Translates to: DWESRGVGPVLI*QCLVLDYLLWG Trigger: GCCCCAGAGTAAGTAATCAAGCACCAAGCACTGTCAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR GCA 72 bp | TTGCTTTGGCGAGGAGACCCTGCTTCTTCTCAGCTATaGTCTGTGACTCCCCCAGTTTGGTCCTGGAGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: LLWRGDPASSQL*SVTPPVWSWRN Trigger: GTTCCTCCAGGACCAAACTGGGGGAGTCACAGAGCATAGCTGAGAAGAAGCAGGGTCTCCTCGCCAAAGCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCAAGAAGTTCCTTTGCTTaGGCGAGGAGACCCTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: GSFECQSAQRSGVGFPCPRSSFA*ARRPCF Trigger: GAAGCAGGGTCTCCTCGCCAAAGCAAAGGAACTTCT...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTACTGGAGCCCAGCCTTTaGAGAAGTTCCTTTGCTTTG | + |
|
Preference number: 3 (lower is better) Translates to: GAGKAKKGPTERGSKAGVLEPSL*RSSFAL Trigger: CAAAGCAAAGGAACTTCTCAAAAGGCTGGGCTCCAG...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR TCA 72 bp | CGTGGGTCCAGTCCTGATCTGACAGTGCTTGGTGCTTaGTTACTTACTCTGGGGCTCAGTTCCCTCTGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RGSSPDLTVLGA*LLTLGLSSLWK Trigger: CTTCCAGAGGGAACTGAGCCCCAGAGTAAGTAATCAAGCACCAAGCACTGTCAGATCAGGACTGGACCCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAAGAAGTTCCTTTGCTTaGGCGAGGAGACCCTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKRSSFA*ARRPCF Trigger: GAAGCAGGGTCTCCTCGCCAAAGCAAAGGAACTTCT...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CAA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCGTCCCCTGGGCTCCTTaGAGTGCCAGTCTGCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: SEQGMYENSCINPSFPSAVPWAP*SASLLR Trigger: TCTGAGCAGACTGGCACTCAAAGGAGCCCAGGGGAC...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR TCA 72 bp | GAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTaGTCTGACAGTGCTTGGTGCTTGATTACTTACTCT | + |
|
Preference number: 3 (lower is better) Translates to: EQTGNPEAWVQS*SDSAWCLITYS Trigger: AGAGTAAGTAATCAAGCACCAAGCACTGTCAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CAA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGGATGCAAGAGAGAAGTaGAATCCAATGAGCAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKDAREK*NPMSKI Trigger: TATTTTGCTCATTGGATTCAACTTCTCTCTTGCATC...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR-3UTR CAA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAGATGCAAGAGAGAAGTaGAATCCAATGAGCAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKDAREK*NPMSKI Trigger: TATTTTGCTCATTGGATTCAACTTCTCTCTTGCATC...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGGGATCCGCAGCTGGCTaGGTACCACCCCAGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQGSAAG*VPPQPR Trigger: CCGGGGCTGGGGTGGTACCCAGCCAGCTGCGGATCC...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGCCTGGGCCTTCCTACTaGCGCTGTGCCCCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQPGPSY*RCAPGL Trigger: GAGGCCTGGGGCACAGCGGCAGTAGGAAGGCCCAGG...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGCGCAGCACCTCCCGTTaGGACTCGCGCAGCAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQRSTSR*DSRSNR Trigger: CCGGTTGCTGCGCGAGTCCCAACGGGAGGTGCTGCG...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCGCGGCTCCCGCTGGTTaGGCAGGGCGATCTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVAAPAG*AGRSAS Trigger: AGAGGCAGATCGCCCTGCGCAACCAGCGGGAGCCGC...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGTCCAGAGGGCCTGGGTaGAGACGGAAGGCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQSRGPG*RRKAWS Trigger: GCTCCAGGCCTTCCGTCTGCACCCAGGCCCTCTGGA...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGCTCTTGGCTTCTGCCTaGGCCTGCTGCAGCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQLLASA*ACCSLR Trigger: CCGGAGGCTGCAGCAGGCCCAGGCAGAAGCCAAGAG...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGCCTCCTCCTCTGGTCTaGGCTGGCTACGTCCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVPPPLV*AGYVPR Trigger: GCGGGGGACGTAGCCAGCCCAGACCAGAGGAGGAGG...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 67% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCGCGGCCTCTCCGCTCTaGCTCCCCTTTCTCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVAASPL*LPFLPG Trigger: GCCTGGGAGAAAGGGGAGCCAGAGCGGAGAGGCCGC...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGCCTCCAGGTGCTCCCTaGCCCCAGAGAGCTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVPPGAP*PQRAQE Trigger: CTCCTGAGCTCTCTGGGGTCAGGGAGCACCTGGAGG...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAGGGCGATCTGCCTCTaGAGCCGCAGCACCTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVRAICL*SRSTSR Trigger: ACGGGAGGTGCTGCGGCTGCAGAGGCAGATCGCCCT...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGAGGGCGATCTGCCTCTaGAGCCGCAGCACCTCCCGT | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVRAICL*SRSTSR Trigger: ACGGGAGGTGCTGCGGCTGCAGAGGCAGATCGCCCT...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCTCCACCTCCAGCTGCTaGCGGCGCTGGGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSSTSSC*RRWATS Trigger: GGAGGTGGCCCAGCGCCGGCAGCAGCTGGAGGTGGA...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCTGCTCCACCTCCAGCTaGTGCCGGCGCTGGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSCSTSS*CRRWAT Trigger: GGTGGCCCAGCGCCGGCAGCAGCTGGAGGTGGAGCA...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGGGCAGGCAGTGCCCATaGCTCCATGGCTCCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQGRQCP*LHGSKV Trigger: GACCTTGGAGCCATGGAGCCATGGGCACTGCCTGCC...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGCTCTTGGCTTCTGCCTaGGCCTGCTGCAGCCTCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVLLASA*ACCSLR Trigger: CCGGAGGCTGCAGCAGGCCCAGGCAGAAGCCAAGAG...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGGCCTGGACAGACACATaGAGAGGCCCAGTCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQAWTDT*RGPVRR Trigger: CCTGCGGACTGGGCCTCTCCATGTGTCTGTCCAGGC...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGGTGGCTGTCAGCCGATaGATCCGCAGCTGGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQVAVSR*IRSWLG Trigger: ACCCAGCCAGCTGCGGATCCATCGGCTGACAGCCAC...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGCCTTCGGAGGTCCCCTaGGCCTTCCTACTGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVPSEVP*AFLLPL Trigger: CAGCGGCAGTAGGAAGGCCCAGGGGACCTCCGAAGG...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGCCCTTTCTCCCAGGCTaGGAGGCGCAGGTAGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQPFLPG*EAQVGV Trigger: AACGCCTACCTGCGCCTCCCAGCCTGGGAGAAAGGG...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCATTGCACCCCTGGCCCTaGGTCCAGTGCTGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSLHPWP*VQCCQA Trigger: TGCCTGGCAGCACTGGACTCAGGGCCAGGGGTGCAA...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGCTGTGGCTCTCCCACTaGGCCGAGAGTTCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQLWLSH*AESSPP Trigger: TGGAGGAGAACTCTCGGCTCAGTGGGAGAGCCACAG...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCACGTTGGGGCCTGGATTaGCCTTCGGAGGTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSRWGLD*PSEVPW Trigger: CCAGGGGACCTCCGAAGGTCAATCCAGGCCCCAACG...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGCCCGGGTGTGTGTGCTaGGGAGTACACAGAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVPGCVC*GVHRGT Trigger: GGTCCCTCTGTGTACTCCTCAGCACACACACCCGGG...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGGGCCTTATAAGCCTGTaGCTCCTCCTCCTCCAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQGLISL*LLLLQP Trigger: GGGCTGGAGGAGGAGGAGGCACAGGCTTATAAGGCC...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGTCCACCTCCAGCTGCTaGCGGCGCTGGGCCACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKSTSSC*RRWATS Trigger: GGAGGTGGCCCAGCGCCGGCAGCAGCTGGAGGTGGA...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGCTCCGGACCTCCTCCTaGTTCTCCTGCAGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVLRTSS*FSCRLS Trigger: GCTCAGCCTGCAGGAGAAGCAGGAGGAGGTCCGGAG...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCCCTCCACCAGCACACTaGCTGCTGTGGGGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVPPPAH*LLWGKP Trigger: TGGCTTCCCCCACAGCAGGCAGTGTGCTGGTGGAGG...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGTCCCTGGGGCTGACTaGTATCACAGCCCGGCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVVPGAD*YHSPAL Trigger: TAGGGCCGGGCTGTGATAGCAGTCAGCCCCAGGGAC...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGTTCTGCCAATCGCACTaGGGCCTCTCCGCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQFCQSH*GLSALA Trigger: AGCCAGAGCGGAGAGGCCGCAGTGCGATTGGCAGAA...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CCAGCCAGTGAGTTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCACCTCCTCCTCTGGTCTaGGCTGGCTACGTCCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: PASELIQGHFCLQDRRTAPPPLV*AGYVPR Trigger: GCGGGGGACGTAGCCAGCCCAGACCAGAGGAGGAGG...TGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGTGGCTGTCAGCCGATaGATCCGCAGCTGGCTGGGT | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVVAVSR*IRSWLG Trigger: ACCCAGCCAGCTGCGGATCCATCGGCTGACAGCCAC...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGCTGAGAGCAAGGGACTaGAGGTTCCTCCTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQLRARD*RFLLGS Trigger: GGACCCCAGGAGGAACCTCCAGTCCCTTGCTCTCAG...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCCACTGGCTGTCTCACTaGGGTCTCGGGCTCGCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSHWLSH*GLGLAG Trigger: GCCAGCGAGCCCGAGACCTCAGTGAGACAGCCAGTG...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS-3UTR TCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGTGGGCTTGGTCGTGGTaGGAGACAGGACATCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVWAWSW*ETGHPG Trigger: GCCAGGATGTCCTGTCTCTCACCACGACCAAGCCCA...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCACCCGGGTGTGTGTGCTaGGGAGTACACAGAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSPGCVC*GVHRGT Trigger: GGTCCCTCTGTGTACTCCTCAGCACACACACCCGGG...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCCTGCCAGGCAGGCAGTaGCCATGGCTCCATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSLPGRQ*PWLHGS Trigger: GGAGCCATGGAGCCATGGGCACTGCCTGCCTGGCAG...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCATGGTACAGCGCTGCTaGAGCTCTCCCAGGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVMVQRC*SSPRAL Trigger: AAGGGCCCTGGGAGAGCTGCAGCAGCGCTGTACCAT...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCTGCTCCACCTCCAGCTaGTGCCGGCGCTGGGCCACC | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSCSTSS*CRRWAT Trigger: GGTGGCCCAGCGCCGGCAGCAGCTGGAGGTGGAGCA...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGAGGCTGAGCCTAGCCTaGTCATGCTCCACCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVRLSLA*SCSTSS Trigger: GCTGGAGGTGGAGCATGAGCAGGCTAGGCTCAGCCT...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGTCCTCCTGCTTCTCCTaGAGGCTGAGCCTAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVSSCFS*RLSLAC Trigger: GCAGGCTAGGCTCAGCCTGCAGGAGAAGCAGGAGGA...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCTCCAGAGGGCCTGGGTaGAGACGGAAGGCCTGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSSRGPG*RRKAWS Trigger: GCTCCAGGCCTTCCGTCTGCACCCAGGCCCTCTGGA...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCTCTGGCCCCCACTACTaGAACCACCCCCGCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSSGPHY*NHPRLH Trigger: GTGGAGGCGGGGGTGGTTGCAGTAGTGGGGGCCAGA...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCAGAGGGTCTGAGCTaGCCTTGCTGGTTAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVAEGLS*PCWLGP Trigger: AGGCCCTAACCAGCAAGGGCAGCTCAGACCCTCTGC...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGTGGCATGGGCCAAGTTaGTATTCCCCGGCACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVWHGPS*YSPAPR Trigger: CCTGGGTGCCGGGGAATAGCAACTTGGCCCATGCCA...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCACACCAGCACACTGCCTaGTGTGGGGGAAGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSHQHTA*CGGSHL Trigger: GAGGTGGCTTCCCCCACAGCAGGCAGTGTGCTGGTG...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCACAGGCCTGCAACAGCTaGAGCTGGGACACCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSQACNS*SWDTST Trigger: GGTGGAGGTGTCCCAGCTGCAGCTGTTGCAGGCCTG...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGCTCCCCAGTTTCTGTTaGCCGGGAGGGTGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVLPSFC*PGGWLL Trigger: AAGGAGCCACCCTCCCGGGCAACAGAAACTGGGGAG...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGCGCAGCACCTCCCGTTaGGACTCGCGCAGCAACCGG | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKRSTSR*DSRSNR Trigger: CCGGTTGCTGCGCGAGTCCCAACGGGAGGTGCTGCG...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGACTCTCCGGAGCTGCTaGGAGCAGGGAAACACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQTLRSC*EQGNTV Trigger: GACAGTGTTTCCCTGCTCCCAGCAGCTCCGGAGAGT...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCGCTGGGGCGAGCAGGTaGGCACTCTTCTCCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVAGASR*ALFSIE Trigger: CTCAATGGAGAAGAGTGCCCACCTGCTCGCCCCAGC...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGCCAAGGCCCCTGAGATaGGATCTGAGCCTCCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVPRPLR*DLSLHS Trigger: CGAGTGGAGGCTCAGATCCCATCTCAGGGGCCTTGG...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCGTAGGCGTTGGGGCCTaGATTGACCTTCGGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVVGVGA*IDLRRS Trigger: GGACCTCCGAAGGTCAATCCAGGCCCCAACGCCTAC...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCGGGCCCCTCTCCTCTaGGGTCCTCTCCGCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: LIQGHFCLQDRRTAASVFRAPLL*GPLRPE Trigger: CTCTGGGCGGAGAGGACCCCAGAGGAGAGGGGCCCG...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCTTCTTGGGGGCTCCTTaGAGGGGCCAGCTCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVFLGAP*RGQLSG Trigger: ACCACTGAGCTGGCCCCTCCAAGGAGCCCCCAAGAA...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR TCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGTAGACTCCAGCAGCTaGACGGCTCCCTCATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVVDSSS*TAPSCS Trigger: GGAACATGAGGGAGCCGTTCAGCTGCTGGAGTCTAC...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGCCTCCAGGTGCTCCCTaGCCCCAGAGAGCTCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKPPGAP*PQRAQE Trigger: CTCCTGAGCTCTCTGGGGTCAGGGAGCACCTGGAGG...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCCCCGGGTGTGTGTGCTaGGGAGTACACAGAGGGACC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSPGCVC*GVHRGT Trigger: GGTCCCTCTGTGTACTCCTCAGCACACACACCCGGG...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGTGGCCTGCAGCTCCCTaGACTCCCGCTGCAAGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKWPAAP*TPAARQ Trigger: CTGCCTTGCAGCGGGAGTGCAGGGAGCTGCAGGCCA...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS-3UTR GCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGTTGCGCAGGGCGATCTaGCTCTGCAGCCGCAGCACC | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKLRRAI*LCSRST Trigger: GGTGCTGCGGCTGCAGAGGCAGATCGCCCTGCGCAA...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTAGCTTCTGCCTGGGCCTaGTGCAGCCTCCGGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVASAWA*CSLRTS Trigger: GGAGGTCCGGAGGCTGCAGCAGGCCCAGGCAGAAGC...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCCACCAGCACACTGCCTaGTGTGGGGGAAGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSHQHTA*CGGSHL Trigger: GAGGTGGCTTCCCCCACAGCAGGCAGTGTGCTGGTG...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCGGTCCTGAGGTCGCTTaGGGTTTGGGAGTTTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVGPEVA*GLGVSP Trigger: CGGAGAAACTCCCAAACCGCAAGCGACCTCAGGACC...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCCAATCACAGGGAGGCTaGCCCTCTCCCGTGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSQSQGG*PSPVEG Trigger: TCCCTCCACGGGAGAGGGGCAGCCTCCCTGTGATTG...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCGTCCTGATGAGGTGGTaGTTCTTGGGGGCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVVLMRW*FLGAPW Trigger: CCAAGGAGCCCCCAAGAAGCACCACCTCATCAGGAC...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGTCCTGATGAGGTGGTaGTTCTTGGGGGCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVVLMRW*FLGAPW Trigger: CCAAGGAGCCCCCAAGAAGCACCACCTCATCAGGAC...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCCAGCTGTTGTCTCCCTaGTGGACTGTCCACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVQLLSP*WTVHSH Trigger: GTGGCTGTGGACAGTCCAGCAGGGAGACAACAGCTG...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAGCCAAGTCCCTCTGGTaGGGGGCTCAGACTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSAKSLW*GAQTEF Trigger: GAACTCAGTCTGAGCCCCCCACCAGAGGGACTTGGC...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGGCCAGCACCACACTGTaGGCTAACTGCTTGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQASTTL*ANCLRT Trigger: GGTTCTCAAGCAGTTAGCCCACAGTGTGGTGCTGGC...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTGGATCCGCAGCTGGCTaGGTACCACCCCAGCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTGSAAG*VPPQPR Trigger: CCGGGGCTGGGGTGGTACCCAGCCAGCTGCGGATCC...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGCGATGGATCCGCAGCTaGCTGGGTACCACCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKRWIRS*LGTTPA Trigger: GGCTGGGGTGGTACCCAGCCAGCTGCGGATCCATCG...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGTCAGCTCTCCTTGGGTaGAGCAAGGTACAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVSALLG*SKVQGQ Trigger: CTGGCCCTGTACCTTGCTCCACCCAAGGAGAGCTGA...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCTGGGTCAGCTCTCCTTaGGTGGAGCAAGGTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVWVSSP*VEQGTG Trigger: CCCTGTACCTTGCTCCACCCAAGGAGAGCTGACCCA...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCAGTGCGGCTGGGCCCTaGTTTCTCCAGCCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSSAAGP*FLQPFL Trigger: GAGGAAGGGCTGGAGAAACCAGGGCCCAGCCGCACT...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGCGGGCCCCTCTCCTCTaGGGTCCTCTCCGCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLRAPLL*GPLRPE Trigger: CTCTGGGCGGAGAGGACCCCAGAGGAGAGGGGCCCG...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCACGGGCCCCTCTCCTCTaGGGTCCTCTCCGCCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: GSFECQSAQRSGVGFPCPRAPLL*GPLRPE Trigger: CTCTGGGCGGAGAGGACCCCAGAGGAGAGGGGCCCG...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCCTGTTGTCTCCCTGCTaGACTGTCCACAGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVLLSPC*TVHSHL Trigger: GAGGTGGCTGTGGACAGTCCAGCAGGGAGACAACAG...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCGGCAAGAAACCCCGCTaGAGCAGCTGTTGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVGKKPR*SSCCLP Trigger: AGGGAGACAACAGCTGCTCCAGCGGGGTTTCTTGCC...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR TCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAGTAGACTCCAGCAGCTaGACGGCTCCCTCATGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSVDSSS*TAPSCS Trigger: GGAACATGAGGGAGCCGTTCAGCTGCTGGAGTCTAC...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCAAGGCCTGGAGCTCCTaGGCCAGAAGGCTGAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSKAWSS*ARRLKR Trigger: GCGTTTCAGCCTTCTGGCTCAGGAGCTCCAGGCCTT...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAAAGCAAGGGGTGTTCTaGCCTCTGGGCTTGGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSKQGVF*PLGLVV Trigger: CACGACCAAGCCCAGAGGTCAGAACACCCCTTGCTT...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCTGGCTCCATTCTCCCTaGTGCTGTTGCCAGCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVWLHSP*CCCQQP Trigger: AGGTTGCTGGCAACAGCATCAGGGAGAATGGAGCCA...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCTGCCAGGCAGGCAGTaGCCATGGCTCCATGGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LIQGHFCLQDRRTAASVFLPGRQ*PWLHGS Trigger: GGAGCCATGGAGCCATGGGCACTGCCTGCCTGGCAG...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGGCTTCTGCCTGGGCCTaGTGCAGCCTCCGGACCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLASAWA*CSLRTS Trigger: GGAGGTCCGGAGGCTGCAGCAGGCCCAGGCAGAAGC...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTATCTGGCCCCCACTACTaGAACCACCCCCGCCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVSGPHY*NHPRLH Trigger: GTGGAGGCGGGGGTGGTTGCAGTAGTGGGGGCCAGA...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAAAGGTAGCAGCTCTCTaGTCTGGCCTCTCCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSKVAAL*SGLSQP Trigger: AGGCTGGGAGAGGCCAGAGCAGAGAGCTGCTACCTT...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGGGCAACTCCAGTATCTaGTCCAAGATCTCCTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQGNSSI*SKISSS Trigger: CGACGAGGAGATCTTGGAGCAGATACTGGAGTTGCC...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCCCGCTGCCCGCCTCCTaGTCATCCTCAGAATCATAT | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVPLPAS*SSSESY Trigger: ATATGATTCTGAGGATGAGCAGGAGGCGGGCAGCGG...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTCCTGGGCCTTCCTACTaGCGCTGTGCCCCAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTPGPSY*RCAPGL Trigger: GAGGCCTGGGGCACAGCGGCAGTAGGAAGGCCCAGG...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCTTCTGCCAATCGCACTaGGGCCTCTCCGCTCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSFCQSH*GLSALA Trigger: AGCCAGAGCGGAGAGGCCGCAGTGCGATTGGCAGAA...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | CCAGCCAGTGAGTTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGTGGCTCCTTGGTTCTaGCAATCGCACTGCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: PASELIQGHFCLQDRRTAVAPWF*QSHCGL Trigger: GAGGCCGCAGTGCGATTGGCAGAACCAAGGAGCCAC...TGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGCCTCAGCCACCATGTTaGAGGGGATGTAGCCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVPQPPC*RGCSLY Trigger: GTACAGGCTACATCCCCTGCAACATGGTGGCTGAGG...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCCCTCAGCCACCATGTTaGAGGGGATGTAGCCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVPQPPC*RGCSLY Trigger: GTACAGGCTACATCCCCTGCAACATGGTGGCTGAGG...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGCTCCCCAGTTTCTGTTaGCTTGGCTCCATTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQLPSFC*LGSILP Trigger: AGGGAGAATGGAGCCAAGGCAACAGAAACTGGGGAG...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCTTGCTTTGCAGGCCCTaGCTCTTAAGAAGGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVLLCRP*LLRRAE Trigger: CTCGGCCCTTCTTAAGAGCCAGGGCCTGCAAAGCAA...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGCAGATCCAGAGGGCCTaGGTGCAGACGGAAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKQIQRA*VQTEGL Trigger: CAGGCCTTCCGTCTGCACCCAGGCCCTCTGGATCTG...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCTCCTGGGGAGCCCGGTaGGAGGTCAAGATCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSSWGAR*EVKIFG Trigger: CCCAAAGATCTTGACCTCCCACCGGGCTCCCCAGGA...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCACGTGCTAGGAAGACCTaGATTCTGGCTCCTCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSRARKT*ILAPPE Trigger: CTCGGGAGGAGCCAGAATCCAGGTCTTCCTAGCACG...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTACGTCCCCCGCTGCTCTaGCCCCCACTACTGCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVRPPLL*PPLLQP Trigger: TGGTTGCAGTAGTGGGGGCCAGAGCAGCGGGGGACG...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CCAGCCAGTGAGTTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCTGGGGCGAGCAGGTaGGCACTCTTCTCCATTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PASELIQGHFCLQDRRTAAGASR*ALFSIE Trigger: CTCAATGGAGAAGAGTGCCCACCTGCTCGCCCCAGC...TGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGTTGCTGCAGAGCCGCTaGAGAGGCAACTCCAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVLLQSR*RGNSSI Trigger: GATACTGGAGTTGCCTCTCCAGCGGCTCTGCAGCAA...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCCCTTCGGAGGTCCCCTaGGCCTTCCTACTGCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSPSEVP*AFLLPL Trigger: CAGCGGCAGTAGGAAGGCCCAGGGGACCTCCGAAGG...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGTTCCAGGAAGTTGGATaGAACCAGGCCCCTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: GPLGLRGWDHTEARWPGQFQEVG*NQAPLS Trigger: GGACAAAGGGGCCTGGTTCCATCCAACTTCCTGGAA...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR TCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTTTGCACCCCTGGCCCTaGGTCCAGTGCTGCCAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTLHPWP*VQCCQA Trigger: TGCCTGGCAGCACTGGACTCAGGGCCAGGGGTGCAA...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCGCCCCAGCCTCTTCCTaGGAGCAAGGGACTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSAPASS*EQGTGG Trigger: ACCTCCAGTCCCTTGCTCTCAGGAAGAGGCTGGGGC...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGCGTTGGGGCCTGGATTaGCCTTCGGAGGTCCCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLRWGLD*PSEVPW Trigger: CCAGGGGACCTCCGAAGGTCAATCCAGGCCCCAACG...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | CCAGCCAGTGAGTTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCATCGAAGTCCCGCATATaGAGCCACTGGGGACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: PASELIQGHFCLQDRRTASKSRI*SHWGPS Trigger: GGAAGGTCCCCAGTGGCTGCATATGCGGGACTTCGA...TGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCATATGCTTCAGCACCTaGTCCAGGCTCTCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVICFST*SRLSSL Trigger: CAAGCTGGAGAGCCTGGAGCAGGTGCTGAAGCATAT...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCAAGGTAGCAGCTCTCTaGTCTGGCCTCTCCCAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSKVAAL*SGLSQP Trigger: AGGCTGGGAGAGGCCAGAGCAGAGAGCTGCTACCTT...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGGAAGTGTGGTGAACTaGAAGGTAGCAGCTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SAPWSPGSERMGSHRGQVGSVVN*KVAALC Trigger: GCAGAGAGCTGCTACCTTGCAGTTCACCACACTTCC...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTCCTCCACCAGCACACTaGCTGCTGTGGGGGAAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGPPPAH*LLWGKP Trigger: TGGCTTCCCCCACAGCAGGCAGTGTGCTGGTGGAGG...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTACAGGCCTGCAACAGCTaGAGCTGGGACACCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVQACNS*SWDTST Trigger: GGTGGAGGTGTCCCAGCTGCAGCTGTTGCAGGCCTG...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCGGCAACTCCAGTATCTaGTCCAAGATCTCCTCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVGNSSI*SKISSS Trigger: CGACGAGGAGATCTTGGAGCAGATACTGGAGTTGCC...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCCACCTCCTCTCCTCCTaGCGTTTCCACCAACGACTC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSHLLSS*RFHQRL Trigger: GAGTCGTTGGTGGAAACGGCAGGAGGAGAGGAGGTG...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCGGTCCTGAGGTCGCTTaGGGTTTGGGAGTTTCTCCG | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSGPEVA*GLGVSP Trigger: CGGAGAAACTCCCAAACCGCAAGCGACCTCAGGACC...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAGTAATGACATCCCCTaGTCTGAAGGGCAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVSNDIP*SEGQLC Trigger: GCAGAGCTGCCCTTCAGAGCAGGGGATGTCATTACT...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTGGCAGGCAGTGCCCATaGCTCCATGGCTCCAAGGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGGRQCP*LHGSKV Trigger: GACCTTGGAGCCATGGAGCCATGGGCACTGCCTGCC...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCGTGTGGGACATGACTTaGGGCTGTTGTGGATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVVWDMT*GCCGWT Trigger: AGTCCATCCACAACAGCCCCAAGTCATGTCCCACAC...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCACTCTCCGGAGCTGCTaGGAGCAGGGAAACACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSTLRSC*EQGNTV Trigger: GACAGTGTTTCCCTGCTCCCAGCAGCTCCGGAGAGT...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAGGAAGACCTGGATTCTaGCTCCTCCCGAGTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSGRPGF*LLPSDS Trigger: AGAGTCACTCGGGAGGAGCCAGAATCCAGGTCTTCC...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCGCCTGGACAGACACATaGAGAGGCCCAGTCCGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSAWTDT*RGPVRR Trigger: CCTGCGGACTGGGCCTCTCCATGTGTCTGTCCAGGC...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CCAGCCAGTGAGTTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCACTGAGCTGCCCTTGCTaGTTAGGGCCTGGACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: PASELIQGHFCLQDRRTALSCPC*LGPGQT Trigger: TGTCTGTCCAGGCCCTAACCAGCAAGGGCAGCTCAG...TGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCACGATCTCAGCAGATGTaGCTGTCAGCCGATGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSRSQQM*LSADGS Trigger: GGATCCATCGGCTGACAGCCACATCTGCTGAGATCG...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGCCAAGGCCCCTGAGATaGGATCTGAGCCTCCACTCG | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKPRPLR*DLSLHS Trigger: CGAGTGGAGGCTCAGATCCCATCTCAGGGGCCTTGG...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCTGCAACAGCTGCAGCTaGGACACCTCCACCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSCNSCS*DTSTST Trigger: TGTGCTGGTGGAGGTGTCCCAGCTGCAGCTGTTGCA...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTGACATCCTGGCTGGCTaGCAGGCAGAAGCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIQGHFCLQDRRTAASVFDILAG*QAEARA Trigger: AGCCCTGGCTTCTGCCTGCCAGCCAGCCAGGATGTC...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCAGAGACAGGACATCCTaGCTGGCTGGCAGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSRDRTS*LAGRQK Trigger: CTTCTGCCTGCCAGCCAGCCAGGATGTCCTGTCTCT...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTCTTGGGAAGTGCGGCTaGGCCCTGGTTTCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGLGKCG*ALVSPA Trigger: GGCTGGAGAAACCAGGGCCCAGCCGCACTTCCCAAG...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCCCCTTTCTCCCAGGCTaGGAGGCGCAGGTAGGCGTT | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSPFLPG*EAQVGV Trigger: AACGCCTACCTGCGCCTCCCAGCCTGGGAGAAAGGG...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CCAGCCAGTGAGTTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCACTGTTGTCTCCCTGCTaGACTGTCCACAGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: PASELIQGHFCLQDRRTALLSPC*TVHSHL Trigger: GAGGTGGCTGTGGACAGTCCAGCAGGGAGACAACAG...TGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCCTGTTGTCTCCCTGCTaGACTGTCCACAGCCACCTC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSLLSPC*TVHSHL Trigger: GAGGTGGCTGTGGACAGTCCAGCAGGGAGACAACAG...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR TCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGCCTGAGCCAGAAGGCTaGAACGCTCAGTCTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKPEPEG*NAQSGF Trigger: GAAGCCAGACTGAGCGTTTCAGCCTTCTGGCTCAGG...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCTGGCTCCATTCTCCCTaGTGCTGTTGCCAGCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSWLHSP*CCCQQP Trigger: AGGTTGCTGGCAACAGCATCAGGGAGAATGGAGCCA...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCACCAGGGCTCTCTGCTTaGTGCCCCAGCTTAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GSFECQSAQRSGVGFPCPPGLSA*CPSLGS Trigger: GCTGCCTAAGCTGGGGCAGCAAGCAGAGAGCCCTGG...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | CCAGCCAGTGAGTTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGTCCTTGGCCAACAGTaGACTGGCTGTCTCACTGAG | + |
|
Preference number: 4 (lower is better) Translates to: PASELIQGHFCLQDRRTAVLGQQ*TGCLTE Trigger: CTCAGTGAGACAGCCAGTGCACTGTTGGCCAAGGAC...TGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS-3UTR GCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGTCGAAGTCCCGCATATaGAGCCACTGGGGACCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKSKSRI*SHWGPS Trigger: GGAAGGTCCCCAGTGGCTGCATATGCGGGACTTCGA...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTAGCCTAGCCTGCTCATaGTCCACCTCCAGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGSLACS*STSSCC Trigger: GCAGCAGCTGGAGGTGGAGCATGAGCAGGCTAGGCT...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTAAGGCTGAGCCTAGCCTaGTCATGCTCCACCTCCAGC | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVRLSLA*SCSTSS Trigger: GCTGGAGGTGGAGCATGAGCAGGCTAGGCTCAGCCT...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCTCCTCCTGCTTCTCCTaGAGGCTGAGCCTAGCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSSSCFS*RLSLAC Trigger: GCAGGCTAGGCTCAGCCTGCAGGAGAAGCAGGAGGA...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGCTCCGGACCTCCTCCTaGTTCTCCTGCAGGCTGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLLRTSS*FSCRLS Trigger: GCTCAGCCTGCAGGAGAAGCAGGAGGAGGTCCGGAG...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTAGCAGAGGGTCTGAGCTaGCCTTGCTGGTTAGGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVAEGLS*PCWLGP Trigger: AGGCCCTAACCAGCAAGGGCAGCTCAGACCCTCTGC...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAGGAAGTGTGGTGAACTaGAAGGTAGCAGCTCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSGSVVN*KVAALC Trigger: GCAGAGAGCTGCTACCTTGCAGTTCACCACACTTCC...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCTCTTCTCTTCTGAGATaGTCCGCACAGCTGCCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSSSLLR*SAQLPQ Trigger: CTGGGGCAGCTGTGCGGAGCATCTCAGAAGAGAAGA...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTAGCACATCCTCCAGGTaGTCCCTGACCCCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGSTSSR*SLTPES Trigger: GCTCTCTGGGGTCAGGGAGCACCTGGAGGATGTGCT...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCAGCACATCCTCCAGGTaGTCCCTGACCCCAGAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSSTSSR*SLTPES Trigger: GCTCTCTGGGGTCAGGGAGCACCTGGAGGATGTGCT...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCACAATCACAGGGAGGCTaGCCCTCTCCCGTGGAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GSFECQSAQRSGVGFPCPQSQGG*PSPVEG Trigger: TCCCTCCACGGGAGAGGGGCAGCCTCCCTGTGATTG...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCTGTCCAACCCTGGTaGCCTCAATCACAGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LIQGHFCLQDRRTAASVFPVQPW*PQSQGG Trigger: GCCTCCCTGTGATTGAGGGCACCAGGGTTGGACAGG...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCATCTGAAGGGCAGCTCTaGCTCCACATCCATATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSSEGQL*LHIHIG Trigger: CCCAATATGGATGTGGAGGCAGAGCTGCCCTTCAGA...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAAGTAATGACATCCCCTaGTCTGAAGGGCAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSSNDIP*SEGQLC Trigger: GCAGAGCTGCCCTTCAGAGCAGGGGATGTCATTACT...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTAGTGCCCATGGCTCCATaGCTCCAAGGTCTCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVVPMAP*LQGLQA Trigger: GGCTTGGAGACCTTGGAGCCATGGAGCCATGGGCAC...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCCAATCTGTTTGTCCTTaGCCAACAGTGCACTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVQSVCP*PTVHWL Trigger: CAGCCAGTGCACTGTTGGCCAAGGACAAACAGATTG...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS-3UTR CCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTCAGATCCAGAGGGCCTaGGTGCAGACGGAAGGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTQIQRA*VQTEGL Trigger: CAGGCCTTCCGTCTGCACCCAGGCCCTCTGGATCTG...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CCAGCCAGTGAGTTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGGAAGACCTGGATTCTaGCTCCTCCCGAGTGACTCT | + |
|
Preference number: 4 (lower is better) Translates to: PASELIQGHFCLQDRRTAGRPGF*LLPSDS Trigger: AGAGTCACTCGGGAGGAGCCAGAATCCAGGTCTTCC...TGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGCGTGCTAGGAAGACCTaGATTCTGGCTCCTCCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKRARKT*ILAPPE Trigger: CTCGGGAGGAGCCAGAATCCAGGTCTTCCTAGCACG...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGCTGAGCTGCCCTTGCTaGTTAGGGCCTGGACAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKLSCPC*LGPGQT Trigger: TGTCTGTCCAGGCCCTAACCAGCAAGGGCAGCTCAG...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTAGGCTCAGGGCCTTCCTaGCCCAGAGTTGGCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVGSGPS*PRVGSI Trigger: TATCGAGCCAACTCTGGGCCAGGAAGGCCCTGAGCC...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGAGTGCGGCTGGGCCCTaGTTTCTCCAGCCCTTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLSAAGP*FLQPFL Trigger: GAGGAAGGGCTGGAGAAACCAGGGCCCAGCCGCACT...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGCTTGGGAAGTGCGGCTaGGCCCTGGTTTCTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLLGKCG*ALVSPA Trigger: GGCTGGAGAAACCAGGGCCCAGCCGCACTTCCCAAG...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTGTAGGCGTTGGGGCCTaGATTGACCTTCGGAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGVGVGA*IDLRRS Trigger: GGACCTCCGAAGGTCAATCCAGGCCCCAACGCCTAC...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAAGTTGTCCTGCCCTCTaGACTCCCCAGTTTCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSSCPAL*TPQFLL Trigger: CAACAGAAACTGGGGAGTCCAGAGGGCAGGACAACT...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCTTCTTGGGGGCTCCTTaGAGGGGCCAGCTCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSFLGAP*RGQLSG Trigger: ACCACTGAGCTGGCCCCTCCAAGGAGCCCCCAAGAA...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGGGCAAGAAACCCCGCTaGAGCAGCTGTTGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKGKKPR*SSCCLP Trigger: AGGGAGACAACAGCTGCTCCAGCGGGGTTTCTTGCC...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR TCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTCTCCACTCAGGAAACTaGGCTCGGGGCCTGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTLHSGN*ARGLSC Trigger: ACAGCTCAGGCCCCGAGCTCAGTTTCCTGAGTGGAG...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAGACGGAGTTCCCCATTaGCAAAGATATGGAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSDGVPH*QRYGSH Trigger: GTGGCTTCCATATCTTTGTCAATGGGGAACTCCGTC...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTAAGCAAGGGGTGTTCTaGCCTCTGGGCTTGGTCGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGKQGVF*PLGLVV Trigger: CACGACCAAGCCCAGAGGTCAGAACACCCCTTGCTT...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCACCAGGCTCTCCAGCTTaGTTTGCAGGCCCTGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GSFECQSAQRSGVGFPCPPGSPA*FAGPGS Trigger: AGAGCCAGGGCCTGCAAAGCAAGCTGGAGAGCCTGG...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGTGGCATGGGCCAAGTTaGTATTCCCCGGCACCCAGG | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLWHGPS*YSPAPR Trigger: CCTGGGTGCCGGGGAATAGCAACTTGGCCCATGCCA...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGACCTCATGGCAGGCCTaGAACAGCTGCAGCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLTSWQA*NSCSWD Trigger: GTCCCAGCTGCAGCTGTTGCAGGCCTGCCATGAGGT...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTCCTGTCCAACCCTGGTaGCCTCAATCACAGGGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTPVQPW*PQSQGG Trigger: GCCTCCCTGTGATTGAGGGCACCAGGGTTGGACAGG...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTGTGGCTCCTTGGTTCTaGCAATCGCACTGCGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTVAPWF*QSHCGL Trigger: GAGGCCGCAGTGCGATTGGCAGAACCAAGGAGCCAC...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGCTCCCCAGTTTCTGTTaGCCGGGAGGGTGGCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLLPSFC*PGGWLL Trigger: AAGGAGCCACCCTCCCGGGCAACAGAAACTGGGGAG...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCCAGCTGTTGTCTCCCTaGTGGACTGTCCACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSQLLSP*WTVHSH Trigger: GTGGCTGTGGACAGTCCAGCAGGGAGACAACAGCTG...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCAGTAATGACATCCCCTaGTCTGAAGGGCAGCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSSNDIP*SEGQLC Trigger: GCAGAGCTGCCCTTCAGAGCAGGGGATGTCATTACT...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGGTGCCCATGGCTCCATaGCTCCAAGGTCTCCAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLVPMAP*LQGLQA Trigger: GGCTTGGAGACCTTGGAGCCATGGAGCCATGGGCAC...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCACGCATATGCAGCCACTaGGGACCTTCCTTGCCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GSFECQSAQRSGVGFPCPRICSH*GPSLPT Trigger: GGTGGGCAAGGAAGGTCCCCAGTGGCTGCATATGCG...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS-3UTR CCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTGTCTGGCTTCGGCACTaGCCCTCAAGCTCTCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTVWLRH*PSSSRT Trigger: GGTTCGAGAGCTTGAGGGCCAGTGCCGAAGCCAGAC...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGGTCTGGCTTCGGCACTaGCCCTCAAGCTCTCGAACC | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLVWLRH*PSSSRT Trigger: GGTTCGAGAGCTTGAGGGCCAGTGCCGAAGCCAGAC...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGTCCTGGGGAGCCCGGTaGGAGGTCAAGATCTTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLSWGAR*EVKIFG Trigger: CCCAAAGATCTTGACCTCCCACCGGGCTCCCCAGGA...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTCGCGCTCTACAAAGTTaGAAGGGACCAGGCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGRALQS*KGPGPF Trigger: GAAGGGGCCTGGTCCCTTCCAACTTTGTAGAGCGCG...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGTTGCTGGTTAGGGCCTaGACAGACACATGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKLLVRA*TDTWRG Trigger: GCCTCTCCATGTGTCTGTCCAGGCCCTAACCAGCAA...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCTGCAACAGCTGCAGCTaGGACACCTCCACCAGCACA | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSCNSCS*DTSTST Trigger: TGTGCTGGTGGAGGTGTCCCAGCTGCAGCTGTTGCA...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAATACTTGGCTTCTTCTaGGTCAGCTCTCCTTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: AQCQPGGTGGPCMVILGSILGFF*VSSPWV Trigger: CACCCAAGGAGAGCTGACCCAGAAGAAGCCAAGTAT...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCCAAAAGGGGTCTGGCTaGGGCTTGGCTCCATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSQKGSG*GLAPFS Trigger: GGAGAATGGAGCCAAGCCCCAGCCAGACCCCTTTTG...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGTTCTTGGGGGCTCCTTaGAGGGGCCAGCTCAGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLFLGAP*RGQLSG Trigger: ACCACTGAGCTGGCCCCTCCAAGGAGCCCCCAAGAA...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTGGCAAGAAACCCCGCTaGAGCAGCTGTTGTCTCCCT | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGGKKPR*SSCCLP Trigger: AGGGAGACAACAGCTGCTCCAGCGGGGTTTCTTGCC...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGCTCGGTGAGAACATTTaGGGGCAAGAAACCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKLGENI*GQETPL Trigger: CAGCGGGGTTTCTTGCCCCCAAATGTTCTCACCGAG...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGCAGCTTAGGAGGACCTaGACAGAGCTGTGTAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKQLRRT*TELCRT Trigger: GGTCCTACACAGCTCTGTCCAGGTCCTCCTAAGCTG...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCTTCCAGGAAGTTGGATaGAACCAGGCCCCTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSFQEVG*NQAPLS Trigger: GGACAAAGGGGCCTGGTTCCATCCAACTTCCTGGAA...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| 3UTR CAA 72 bp | GGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTaGAGAAGTTCCTTTGCTTTGGCGAGGAGACCCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GRQPQSFLEPSL*RSSFALARRPC Trigger: GCAGGGTCTCCTCGCCAAAGCAAAGGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR TCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTACCAGGCGCTTGGCAATaGCTGCCAGTTCAGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVPGAWQ*LPVQHS Trigger: AGAATGCTGAACTGGCAGTCATTGCCAAGCGCCTGG...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAACTGTGGCTCTCCCACTaGGCCGAGAGTTCTCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKLWLSH*AESSPP Trigger: TGGAGGAGAACTCTCGGCTCAGTGGGAGAGCCACAG...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCACCTGAGCCAGAAGGCTaGAACGCTCAGTCTGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSFECQSAQRSGVGFPCPPEPEG*NAQSGF Trigger: GAAGCCAGACTGAGCGTTTCAGCCTTCTGGCTCAGG...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTCCTCCTCAGGGATGCTaGACAGCTTCTTGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGPPQGC*TASCCR Trigger: TCTGCAGCAAGAAGCTGTTCAGCATCCCTGAGGAGG...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | CCAGCCAGTGAGTTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCATTCTGGGCAGCAGAATaGATCAGCTTAGGAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: PASELIQGHFCLQDRRTAFWAAE*ISLGGP Trigger: AGGTCCTCCTAAGCTGATTCATTCTGCTGCCCAGAA...TGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGACTGGGGACCTTCCTTaGCCACCAGAGAGAGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLTGDLP*PPERVW Trigger: CCAGACTCTCTCTGGTGGGCAAGGAAGGTCCCCAGT...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS-3UTR GCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAAGCCTAGCCTGCTCATaGTCCACCTCCAGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKSLACS*STSSCC Trigger: GCAGCAGCTGGAGGTGGAGCATGAGCAGGCTAGGCT...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTGTGCACTCCACTTCCTaGTTAGCCAGGGAAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTVHSTS*LAREGA Trigger: GGCTCCTTCCCTGGCTAAGCAGGAAGTGGAGTGCAC...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGGTGCACTCCACTTCCTaGTTAGCCAGGGAAGGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLVHSTS*LAREGA Trigger: GGCTCCTTCCCTGGCTAAGCAGGAAGTGGAGTGCAC...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCCCGCTGCCCGCCTCCTaGTCATCCTCAGAATCATAT | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSPLPAS*SSSESY Trigger: ATATGATTCTGAGGATGAGCAGGAGGCGGGCAGCGG...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGGTCCTGATGAGGTGGTaGTTCTTGGGGGCTCCTTGG | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLVLMRW*FLGAPW Trigger: CCAAGGAGCCCCCAAGAAGCACCACCTCATCAGGAC...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTACCTCAGCCACCATGTTaGAGGGGATGTAGCCTGTAC | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVPQPPC*RGCSLY Trigger: GTACAGGCTACATCCCCTGCAACATGGTGGCTGAGG...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAGGATTATAGTCAAATaGAGCCACCATAGGTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVRIIVK*SHHRSG Trigger: TCCCGACCTATGGTGGCTGCATTTGACTATAATCCT...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCCTTCTCCTCCGTCTCTaGGAAGCTGCTTTTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSLLLRL*EAAFSQ Trigger: CTGAGAAAAAGCAGCTTCCCAGAGACGGAGGAGAAG...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTTTGCTTTGCAGGCCCTaGCTCTTAAGAAGGGCCGAG | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGLLCRP*LLRRAE Trigger: CTCGGCCCTTCTTAAGAGCCAGGGCCTGCAAAGCAA...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCTGGGGCTGTTGTGGATaGACTCTGAGCGAGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSWGCCG*TLSEKN Trigger: ATTCTTCTCGCTCAGAGTCCATCCACAACAGCCCCA...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCAGGAAGCTCGGCCTCTaGATTCTCATTGGGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSRKLGL*ILIGTL Trigger: GAGGGTCCCAATGAGAATCCAGAGGCCGAGCTTCCT...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTAAGGAAGCTCGGCCTCTaGATTCTCATTGGGACCCTC | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVRKLGL*ILIGTL Trigger: GAGGGTCCCAATGAGAATCCAGAGGCCGAGCTTCCT...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCACGCGCTCTACAAAGTTaGAAGGGACCAGGCCCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSFECQSAQRSGVGFPCPRALQS*KGPGPF Trigger: GAAGGGGCCTGGTCCCTTCCAACTTTGTAGAGCGCG...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGCGTACAGTCACCTCATaGCAGGCCTGCAACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLRTVTS*QACNSC Trigger: GCAGCTGTTGCAGGCCTGCCATGAGGTGACTGTACG...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAACTGAGAGCAAGGGACTaGAGGTTCCTCCTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKLRARD*RFLLGS Trigger: GGACCCCAGGAGGAACCTCCAGTCCCTTGCTCTCAG...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGTCAGCTCTCCTTGGGTaGAGCAAGGTACAGGGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLSALLG*SKVQGQ Trigger: CTGGCCCTGTACCTTGCTCCACCCAAGGAGAGCTGA...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGTGGGTCAGCTCTCCTTaGGTGGAGCAAGGTACAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLWVSSP*VEQGTG Trigger: CCCTGTACCTTGCTCCACCCAAGGAGAGCTGACCCA...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCGGGAGGAACAAGGCCTaGAACCCAGTTCCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSGRNKA*NPVPLP Trigger: AGGAAGAGGAACTGGGTTCCAGGCCTTGTTCCTCCC...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTCAAAAGGGGTCTGGCTaGGGCTTGGCTCCATTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTQKGSG*GLAPFS Trigger: GGAGAATGGAGCCAAGCCCCAGCCAGACCCCTTTTG...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTATTGCTGCAGAGCCGCTaGAGAGGCAACTCCAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVLLQSR*RGNSSI Trigger: GATACTGGAGTTGCCTCTCCAGCGGCTCTGCAGCAA...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAACGCAAGTTCAGGCTaGCTAGGGTCTTGGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKNASSG*LGSWEV Trigger: CACTTCCCAAGACCCTAGCCAGCCTGAACTTGCGTT...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCTCGGTGAGAACATTTaGGGGCAAGAAACCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: LIQGHFCLQDRRTAASVFLGENI*GQETPL Trigger: CAGCGGGGTTTCTTGCCCCCAAATGTTCTCACCGAG...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCAGCTTAGGAGGACCTaGACAGAGCTGTGTAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: LIQGHFCLQDRRTAASVFQLRRT*TELCRT Trigger: GGTCCTACACAGCTCTGTCCAGGTCCTCCTAAGCTG...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR TCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTTGGCTCCATTCTCCCTaGTGCTGTTGCCAGCAACCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTWLHSP*CCCQQP Trigger: AGGTTGCTGGCAACAGCATCAGGGAGAATGGAGCCA...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTTCCCTGCACTCCCGCTaGAAGGCAGCAATCTGTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTSLHSR*KAAICL Trigger: CAAACAGATTGCTGCCTTGCAGCGGGAGTGCAGGGA...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTAAGCTGCTGCACCCTTTaGTGCTTCTCTGGTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVSCCTL*CFSGSL Trigger: AAGGGAACCAGAGAAGCAGCAAAGGGTGCAGCAGCT...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTAGCTGCTGCACCCTTTaGTGCTTCTCTGGTTCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGSCCTL*CFSGSL Trigger: AAGGGAACCAGAGAAGCAGCAAAGGGTGCAGCAGCT...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTTTCTCCCATTCCACCTaGTCCTTCTCTGTGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LIQGHFCLQDRRTAASVFFSHST*SFSVAL Trigger: GAGAGCCACAGAGAAGGAGCAGGTGGAATGGGAGAA...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTCTCTCCAGCTTGCTTTaGAGGCCCTGGCTCTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGLSSLL*RPWLLR Trigger: TCTTAAGAGCCAGGGCCTGCAAAGCAAGCTGGAGAG...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGACTGAGTTCATCTCCTaGGGCCTCCTCCTCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLTEFIS*GLLLWS Trigger: AGACCAGAGGAGGAGGCCGCAGGAGATGAACTCAGT...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTTCTGAAGGGCAGCTCTaGCTCCACATCCATATTGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGSEGQL*LHIHIG Trigger: CCCAATATGGATGTGGAGGCAGAGCTGCCCTTCAGA...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGTCTCCAAGCCGTaGGAGGGTTGTCAGTTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTKVSKP*EGCQLL Trigger: GAGCAACTGACAACCCTCCCACGGCTTGGAGACCTT...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTTTTCCTCCTTCAGGATaGTACAGCGCTGCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LIQGHFCLQDRRTAASVFFPPSG*YSAAAA Trigger: AGCTGCAGCAGCGCTGTACCATCCTGAAGGAGGAAA...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTTTGCTGGTTAGGGCCTaGACAGACACATGGAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTLLVRA*TDTWRG Trigger: GCCTCTCCATGTGTCTGTCCAGGCCCTAACCAGCAA...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTGGGAGGAACAAGGCCTaGAACCCAGTTCCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTGRNKA*NPVPLP Trigger: AGGAAGAGGAACTGGGTTCCAGGCCTTGTTCCTCCC...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCAGGGAGGAACAAGGCCTaGAACCCAGTTCCTCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSFECQSAQRSGVGFPCPGRNKA*NPVPLP Trigger: AGGAAGAGGAACTGGGTTCCAGGCCTTGTTCCTCCC...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTAAACGCAAGTTCAGGCTaGCTAGGGTCTTGGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVNASSG*LGSWEV Trigger: CACTTCCCAAGACCCTAGCCAGCCTGAACTTGCGTT...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCGCGGCCTCTCCGCTCTaGCTCCCCTTTCTCCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPAASPL*LPFLPG Trigger: GCCTGGGAGAAAGGGGAGCCAGAGCGGAGAGGCCGC...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCAGTTGTCCTGCCCTCTaGACTCCCCAGTTTCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSSCPAL*TPQFLL Trigger: CAACAGAAACTGGGGAGTCCAGAGGGCAGGACAACT...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR TCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAGGCACTCTTCTCCATTaGGGTAGATGGCATGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKGTLLH*GRWHGP Trigger: TGGCCCATGCCATCTACCTCAATGGAGAAGAGTGCC...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGTCTGAGTTGCGGCTGTaGTCCACAAGGGAATTCACC | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLSELRL*STREFT Trigger: GGTGAATTCCCTTGTGGATCACAGCCGCAACTCAGA...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCGTCTCTGGGAAGCTaGTTTTTCTCAGCATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: LIQGHFCLQDRRTAASVFPSLGS*FFSASG Trigger: ACCAGATGCTGAGAAAAAGCAGCTTCCCAGAGACGG...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCGCGGCTCCCGCTGGTTaGGCAGGGCGATCTGCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSAAAPAG*AGRSAS Trigger: AGAGGCAGATCGCCCTGCGCAACCAGCGGGAGCCGC...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCATGCTGCACCCTTTGCTaGTTCTCTGGTTCCCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSFECQSAQRSGVGFPCPCCTLC*FSGSLR Trigger: CCTAAGGGAACCAGAGAAGCAGCAAAGGGTGCAGCA...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTATATGCTTCAGCACCTaGTCCAGGCTCTCCAGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTICFST*SRLSSL Trigger: CAAGCTGGAGAGCCTGGAGCAGGTGCTGAAGCATAT...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAACTGAGTTCATCTCCTaGGGCCTCCTCCTCTGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKTEFIS*GLLLWS Trigger: AGACCAGAGGAGGAGGCCGCAGGAGATGAACTCAGT...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTACAGGTTACAAAAGGTTaGCCAATATGTGCTGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVQVTKG*PICAGA Trigger: CGCCCCAGCACATATTGGGCAACCTTTTGTAACCTG...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTAGAGCTCCCTCAGGCTTaGAACTCTCTTCAAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVELPQA*NSLQTS Trigger: TGAGGTTTGAAGAGAGTTCCAAGCCTGAGGGAGCTC...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCGAGCTCCCTCAGGCTTaGAACTCTCTTCAAACCTCA | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSELPQA*NSLQTS Trigger: TGAGGTTTGAAGAGAGTTCCAAGCCTGAGGGAGCTC...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTTTTCCTCCTTCAGGATaGTACAGCGCTGCTGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTFPPSG*YSAAAA Trigger: AGCTGCAGCAGCGCTGTACCATCCTGAAGGAGGAAA...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTATGGGGCTGTTGTGGATaGACTCTGAGCGAGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVWGCCG*TLSEKN Trigger: ATTCTTCTCGCTCAGAGTCCATCCACAACAGCCCCA...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGGTGTGGGACATGACTTaGGGCTGTTGTGGATGGACT | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLVWDMT*GCCGWT Trigger: AGTCCATCCACAACAGCCCCAAGTCATGTCCCACAC...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCCGATGGATCCGCAGCTaGCTGGGTACCACCCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPRWIRS*LGTTPA Trigger: GGCTGGGGTGGTACCCAGCCAGCTGCGGATCCATCG...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 54% GC, longest homopolymer 6 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTATCAGGCAGACCTGCTaGAAGTGTGGTGAACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGIRQTC*KCGELQ Trigger: TTGCAGTTCACCACACTTCCAGCAGGTCTGCCTGAT...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTATCAGGCAGACCTGCTaGAAGTGTGGTGAACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: LIQGHFCLQDRRTAASVFIRQTC*KCGELQ Trigger: TTGCAGTTCACCACACTTCCAGCAGGTCTGCCTGAT...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTATACTTGGCTTCTTCTaGGTCAGCTCTCCTTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGILGFF*VSSPWV Trigger: CACCCAAGGAGAGCTGACCCAGAAGAAGCCAAGTAT...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTAATACTTGGCTTCTTCTaGGTCAGCTCTCCTTGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVILGFF*VSSPWV Trigger: CACCCAAGGAGAGCTGACCCAGAAGAAGCCAAGTAT...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTTTCCAGGAAGTTGGATaGAACCAGGCCCCTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTFQEVG*NQAPLS Trigger: GGACAAAGGGGCCTGGTTCCATCCAACTTCCTGGAA...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCGCCCCAGCCTCTTCCTaGGAGCAAGGGACTGGAGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPAPASS*EQGTGG Trigger: ACCTCCAGTCCCTTGCTCTCAGGAAGAGGCTGGGGC...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAATCTGAGTTGCGGCTGTaGTCCACAAGGGAATTCACC | + |
|
Preference number: 4 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKSELRL*STREFT Trigger: GGTGAATTCCCTTGTGGATCACAGCCGCAACTCAGA...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR TCA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCATTCTGGGCAGCAGAATaGATCAGCTTAGGAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: GSFECQSAQRSGVGFPCPFWAAE*ISLGGP Trigger: AGGTCCTCCTAAGCTGATTCATTCTGCTGCCCAGAA...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAGCGCTTGGCAATGACTaGCAGTTCAGCATTCTTCCG | + |
|
Preference number: 4 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKALGND*QFSILP Trigger: CGGAAGAATGCTGAACTGGCAGTCATTGCCAAGCGC...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAACTCATGTTCGTTTCCTaGAGCTTCTGTGCCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKLMFVS*SFCALS Trigger: GGAGAGGGCACAGAAGCTGCAGGAAACGAACATGAG...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAATGCTGCACCCTTTGCTaGTTCTCTGGTTCCCTTAGG | + |
|
Preference number: 4 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKCCTLC*FSGSLR Trigger: CCTAAGGGAACCAGAGAAGCAGCAAAGGGTGCAGCA...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAACTCTCCAGCTTGCTTTaGAGGCCCTGGCTCTTAAGA | + |
|
Preference number: 4 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKLSSLL*RPWLLR Trigger: TCTTAAGAGCCAGGGCCTGCAAAGCAAGCTGGAGAG...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCACAGGTTACAAAAGGTTaGCCAATATGTGCTGGGGCG | + |
|
Preference number: 4 (lower is better) Translates to: GSFECQSAQRSGVGFPCPQVTKG*PICAGA Trigger: CGCCCCAGCACATATTGGGCAACCTTTTGTAACCTG...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCCGTCCCCCGCTGCTCTaGCCCCCACTACTGCAACCA | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSARPPLL*PPLLQP Trigger: TGGTTGCAGTAGTGGGGGCCAGAGCAGCGGGGGACG...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCGACATCCTGGCTGGCTaGCAGGCAGAAGCCAGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPDILAG*QAEARA Trigger: AGCCCTGGCTTCTGCCTGCCAGCCAGCCAGGATGTC...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| 3UTR CAA 72 bp | TTCCTGGAGCCCAGCCTTTTGAGAAGTTCCTTTGCTTaGGCGAGGAGACCCTGCTTCTTCTCAGCTATGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FLEPSLLRSSFA*ARRPCFFSAML Trigger: GAGCATAGCTGAGAAGAAGCAGGGTCTCCTCGCCAAAGCAAAGGAACTTCTCAAAAGGCTGGGCTCCAGGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCAAGGCCTGGAGCTCCTaGGCCAGAAGGCTGAAACGC | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPKAWSS*ARRLKR Trigger: GCGTTTCAGCCTTCTGGCTCAGGAGCTCCAGGCCTT...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAGACGGAGTTCCCCATTaGCAAAGATATGGAAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKDGVPH*QRYGSH Trigger: GTGGCTTCCATATCTTTGTCAATGGGGAACTCCGTC...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCCCAGGGCTCTCTGCTTaGTGCCCCAGCTTAGGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSAPGLSA*CPSLGS Trigger: GCTGCCTAAGCTGGGGCAGCAAGCAGAGAGCCCTGG...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCAGAGAGAGTCTGGCCTaGAGCTCCCTGCACTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSARESLA*SSLHSR Trigger: GCGGGAGTGCAGGGAGCTGCAGGCCAGACTCTCTCT...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS-3UTR GCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCGTCCCTGGGGCTGACTaGTATCACAGCCCGGCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSAVPGAD*YHSPAL Trigger: TAGGGCCGGGCTGTGATAGCAGTCAGCCCCAGGGAC...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTAAGGATTATAGTCAAATaGAGCCACCATAGGTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVRIIVK*SHHRSG Trigger: TCCCGACCTATGGTGGCTGCATTTGACTATAATCCT...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAACTTCTCCTCCGTCTCTaGGAAGCTGCTTTTTCTCAG | + |
|
Preference number: 4 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKLLLRL*EAAFSQ Trigger: CTGAGAAAAAGCAGCTTCCCAGAGACGGAGGAGAAG...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCGCCAAGTCCCTCTGGTaGGGGGCTCAGACTGAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPAKSLW*GAQTEF Trigger: GAACTCAGTCTGAGCCCCCCACCAGAGGGACTTGGC...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCGGCTCAGGGCCTTCCTaGCCCAGAGTTGGCTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPGSGPS*PRVGSI Trigger: TATCGAGCCAACTCTGGGCCAGGAAGGCCCTGAGCC...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCCTCCACTCAGGAAACTaGGCTCGGGGCCTGAGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSALHSGN*ARGLSC Trigger: ACAGCTCAGGCCCCGAGCTCAGTTTCCTGAGTGGAG...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCTGGGCTTGGTCGTGGTaGGAGACAGGACATCCTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSAWAWSW*ETGHPG Trigger: GCCAGGATGTCCTGTCTCTCACCACGACCAAGCCCA...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCATGGTACAGCGCTGCTaGAGCTCTCCCAGGGCCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSAMVQRC*SSPRAL Trigger: AAGGGCCCTGGGAGAGCTGCAGCAGCGCTGTACCAT...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCACCTCATGGCAGGCCTaGAACAGCTGCAGCTGGGAC | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSATSWQA*NSCSWD Trigger: GTCCCAGCTGCAGCTGTTGCAGGCCTGCCATGAGGT...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCCACCTCCTCTCCTCCTaGCGTTTCCACCAACGACTC | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPHLLSS*RFHQRL Trigger: GAGTCGTTGGTGGAAACGGCAGGAGGAGAGGAGGTG...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCCGTACAGTCACCTCATaGCAGGCCTGCAACAGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPRTVTS*QACNSC Trigger: GCAGCTGTTGCAGGCCTGCCATGAGGTGACTGTACG...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCAGAGACAGGACATCCTaGCTGGCTGGCAGGCAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPRDRTS*LAGRQK Trigger: CTTCTGCCTGCCAGCCAGCCAGGATGTCCTGTCTCT...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCTCTTCCTCTTCTTCCTaGATGTCTGATAAGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSSSSSS*MSDKSE Trigger: CTCAGACTTATCAGACATCCAGGAAGAAGAGGAAGA...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTTCTTCCTCTTCTTCCTaGATGTCTGATAAGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: LIQGHFCLQDRRTAASVFSSSSS*MSDKSE Trigger: CTCAGACTTATCAGACATCCAGGAAGAAGAGGAAGA...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTATCTTCCTCTTCTTCCTaGATGTCTGATAAGTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GAGKAKKGPTERGSKAGVSSSSS*MSDKSE Trigger: CTCAGACTTATCAGACATCCAGGAAGAAGAGGAAGA...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCCCAGGCGCTTGGCAATaGCTGCCAGTTCAGCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPPGAWQ*LPVQHS Trigger: AGAATGCTGAACTGGCAGTCATTGCCAAGCGCCTGG...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCGGCACTCTTCTCCATTaGGGTAGATGGCATGGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPGTLLH*GRWHGP Trigger: TGGCCCATGCCATCTACCTCAATGGAGAAGAGTGCC...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTGTGAACTCCAAGCTCTaGCATATCTTCTTTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTVNSKL*HIFFLR Trigger: TCTGAGAAAGAAGATATGTCAGAGCTTGGAGTTCAC...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCCCTCCTCAGGGATGCTaGACAGCTTCTTGCTGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPPPQGC*TASCCR Trigger: TCTGCAGCAAGAAGCTGTTCAGCATCCCTGAGGAGG...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 50% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCCAGCTGTTGTCTCCCTaGTGGACTGTCCACAGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSAQLLSP*WTVHSH Trigger: GTGGCTGTGGACAGTCCAGCAGGGAGACAACAGCTG...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCTGTCCACCTCTGGTGTaGGACATGACTTGGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPCPPLV*DMTWGC Trigger: ACAGCCCCAAGTCATGTCCCACACCAGAGGTGGACA...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCGCCAGCACCACACTGTaGGCTAACTGCTTGAGAACC | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPASTTL*ANCLRT Trigger: GGTTCTCAAGCAGTTAGCCCACAGTGTGGTGCTGGC...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAGTGAACTCCAAGCTCTaGCATATCTTCTTTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKVNSKL*HIFFLR Trigger: TCTGAGAAAGAAGATATGTCAGAGCTTGGAGTTCAC...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCTCTGAGTTGCGGCTGTaGTCCACAAGGGAATTCACC | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPSELRL*STREFT Trigger: GGTGAATTCCCTTGTGGATCACAGCCGCAACTCAGA...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCCTCATGTTCGTTTCCTaGAGCTTCTGTGCCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPLMFVS*SFCALS Trigger: GGAGAGGGCACAGAAGCTGCAGGAAACGAACATGAG...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 49% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR GCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCTTCTCCCATTCCACCTaGTCCTTCTCTGTGGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPFSHST*SFSVAL Trigger: GAGAGCCACAGAGAAGGAGCAGGTGGAATGGGAGAA...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCTGTCCACCTCTGGTGTaGGACATGACTTGGGGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSACPPLV*DMTWGC Trigger: ACAGCCCCAAGTCATGTCCCACACCAGAGGTGGACA...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCCGATCTCAGCAGATGTaGCTGTCAGCCGATGGATCC | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSARSQQM*LSADGS Trigger: GGATCCATCGGCTGACAGCCACATCTGCTGAGATCG...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCAGTTGTCCTGCCCTCTaGACTCCCCAGTTTCTGTTG | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPSCPAL*TPQFLL Trigger: CAACAGAAACTGGGGAGTCCAGAGGGCAGGACAACT...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCCTCGGTGAGAACATTTaGGGGCAAGAAACCCCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSALGENI*GQETPL Trigger: CAGCGGGGTTTCTTGCCCCCAAATGTTCTCACCGAG...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCCAGCTTAGGAGGACCTaGACAGAGCTGTGTAGGACC | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSAQLRRT*TELCRT Trigger: GGTCCTACACAGCTCTGTCCAGGTCCTCCTAAGCTG...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCCCGTCTCTGGGAAGCTaGTTTTTCTCAGCATCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPPSLGS*FFSASG Trigger: ACCAGATGCTGAGAAAAAGCAGCTTCCCAGAGACGG...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 48% GC, longest homopolymer 7 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGCTTTGGACATCTCTATaGAAAGACTTGCAGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: GVDENRLGIQRRGSSPDLLWTSL*KDLQRN Trigger: ATTTCTCTGCAAGTCTTTCCATAGAGATGTCCAAAG...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CCA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTCTTTGGACATCTCTATaGAAAGACTTGCAGAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTLWTSL*KDLQRN Trigger: ATTTCTCTGCAAGTCTTTCCATAGAGATGTCCAAAG...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR TCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCTTCTGGGCAGCAGAATaGATCAGCTTAGGAGGACCT | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSAFWAAE*ISLGGP Trigger: AGGTCCTCCTAAGCTGATTCATTCTGCTGCCCAGAA...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR TCA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCGTGAACTCCAAGCTCTaGCATATCTTCTTTCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPVNSKL*HIFFLR Trigger: TCTGAGAAAGAAGATATGTCAGAGCTTGGAGTTCAC...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR GCA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCAGGATTATAGTCAAATaGAGCCACCATAGGTCGGGA | + |
|
Preference number: 4 (lower is better) Translates to: SEQGMYENSCINPSFPSARIIVK*SHHRSG Trigger: TCCCGACCTATGGTGGCTGCATTTGACTATAATCCT...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS GCA 90 bp | CACCGGGCTCCTGTCCAACCCTGGTGCCCTCAATCACAGGGAGGCTaGCCCTCTCCCGTGGAGGGACCGGCCGTGCAGAGGCCTGGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: HRAPVQPWCPQSQGG*PSPVEGPAVQRPGA Trigger: GGCCCCAGGCCTCTGCACGGCCGGTCCCTCCACGGGAGAGGGGCAGCCTCCCTGTGATTGAGGGCACCAGGGTTGGACAGGAGCCCGGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | GGGAGGCTGCCCCTCTCCCGTGGAGGGACCGGCCGTGCAGAGGCCTaGGGCCCGCCATTGCCAAGAAGCCGGCTGCAATGTTCTCGGGGG | + |
|
Preference number: 5 (lower is better) Translates to: GRLPLSRGGTGRAEA*GPPLPRSRLQCSRG Trigger: CCCCCGAGAACATTGCAGCCGGCTTCTTGGCAATGGCGGGCCCCAGGCCTCTGCACGGCCGGTCCCTCCACGGGAGAGGGGCAGCCTCCC 72% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | TCCAACCCTGGTGCCCTCAATCACAGGGAGGCTGCCCCTCTCCCGTaGAGGGACCGGCCGTGCAGAGGCCTGGGGCCCGCCATTGCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: SNPGALNHREAAPLP*RDRPCRGLGPAIAK Trigger: CTTGGCAATGGCGGGCCCCAGGCCTCTGCACGGCCGGTCCCTCCACGGGAGAGGGGCAGCCTCCCTGTGATTGAGGGCACCAGGGTTGGA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | TCTCCCGTGGAGGGACCGGCCGTGCAGAGGCCTGGGGCCCGCCATTaGCAAGAAGCCGGCTGCAATGTTCTCGGGGGTCCTGAGGTCGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPVEGPAVQRPGARH*QEAGCNVLGGPEVA Trigger: AGCGACCTCAGGACCCCCGAGAACATTGCAGCCGGCTTCTTGGCAATGGCGGGCCCCAGGCCTCTGCACGGCCGGTCCCTCCACGGGAGA 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | CTCAATCACAGGGAGGCTGCCCCTCTCCCGTGGAGGGACCGGCCGTaGAGAGGCCTGGGGCCCGCCATTGCCAAGAAGCCGGCTGCAATG | + |
|
Preference number: 5 (lower is better) Translates to: LNHREAAPLPWRDRP*RGLGPAIAKKPAAM Trigger: CATTGCAGCCGGCTTCTTGGCAATGGCGGGCCCCAGGCCTCTGCACGGCCGGTCCCTCCACGGGAGAGGGGCAGCCTCCCTGTGATTGAG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS TCA 90 bp | CTTTCTCCCAGGCTGGGAGGCGCAGGTAGGCGTTGGGGCCTGGATTaGCCTTCGGAGGTCCCCTGGGCCTTCCTACTGCCGCTGTGCCCC | + |
|
Preference number: 5 (lower is better) Translates to: LSPRLGGAGRRWGLD*PSEVPWAFLLPLCP Trigger: GGGGCACAGCGGCAGTAGGAAGGCCCAGGGGACCTCCGAAGGTCAATCCAGGCCCCAACGCCTACCTGCGCCTCCCAGCCTGGGAGAAAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | GGGTGGCTCCTTGGTTCTGCCAATCGCACTGCGGCCTCTCCGCTCTaGCTCCCCTTTCTCCCAGGCTGGGAGGCGCAGGTAGGCGTTGGG | + |
|
Preference number: 5 (lower is better) Translates to: GWLLGSANRTAASPL*LPFLPGWEAQVGVG Trigger: CCCAACGCCTACCTGCGCCTCCCAGCCTGGGAGAAAGGGGAGCCAGAGCGGAGAGGCCGCAGTGCGATTGGCAGAACCAAGGAGCCACCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | CAGCCCCGGCACCCACAGCCAGGCAACAGCGCAGAGGGTCTGAGCTaGCCTTGCTGGTTAGGGCCTGGACAGACACATGGAGAGGCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: QPRHPQPGNSAEGLS*PCWLGPGQTHGEAQ Trigger: CTGGGCCTCTCCATGTGTCTGTCCAGGCCCTAACCAGCAAGGGCAGCTCAGACCCTCTGCGCTGTTGCCTGGCTGTGGGTGCCGGGGCTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | CCGGCCGTGCAGAGGCCTGGGGCCCGCCATTGCCAAGAAGCCGGCTaGAATGTTCTCGGGGGTCCTGAGGTCGCTTGCGGTTTGGGAGTT | + |
|
Preference number: 5 (lower is better) Translates to: PAVQRPGARHCQEAG*NVLGGPEVACGLGV Trigger: AACTCCCAAACCGCAAGCGACCTCAGGACCCCCGAGAACATTGCAGCCGGCTTCTTGGCAATGGCGGGCCCCAGGCCTCTGCACGGCCGG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | GCACCCCTGGCCCTGAGTCCAGTGCTGCCAGGCAGGCAGTGCCCATaGCTCCATGGCTCCAAGGTCTCCAAGCCGTGGGAGGGTTGTCAG | + |
|
Preference number: 5 (lower is better) Translates to: APLALSPVLPGRQCP*LHGSKVSKPWEGCQ Trigger: CTGACAACCCTCCCACGGCTTGGAGACCTTGGAGCCATGGAGCCATGGGCACTGCCTGCCTGGCAGCACTGGACTCAGGGCCAGGGGTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | CGATCTCAGCAGATGTGGCTGTCAGCCGATGGATCCGCAGCTGGCTaGGTACCACCCCAGCCCCGGCACCCACAGCCAGGCAACAGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RSQQMWLSADGSAAG*VPPQPRHPQPGNSA Trigger: TGCGCTGTTGCCTGGCTGTGGGTGCCGGGGCTGGGGTGGTACCCAGCCAGCTGCGGATCCATCGGCTGACAGCCACATCTGCTGAGATCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGCCTCTCCGCCCAGAGTaGTCCTGCCCTCTGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: GPLGLRGWDHTEARWPGQPLRPE*SCPLDS Trigger: GGAGTCCAGAGGGCAGGACAACTCTGGGCGGAGAGG...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS TCA 90 bp | ACTGCAACCACCCCCGCCTCCACTCAGGAAACTGAGCTCGGGGCCTaGGCTGTGCGACGAATCAGCCAGCTCCCGAGGGAGGGTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: TATTPASTQETELGA*AVRRISQLPREGGQ Trigger: CTGTCCACCCTCCCTCGGGAGCTGGCTGATTCGTCGCACAGCTCAGGCCCCGAGCTCAGTTTCCTGAGTGGAGGCGGGGGTGGTTGCAGT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | AGGTTTGCACCCCTGGCCCTGAGTCCAGTGCTGCCAGGCAGGCAGTaGCCATGGCTCCATGGCTCCAAGGTCTCCAAGCCGTGGGAGGGT | + |
|
Preference number: 5 (lower is better) Translates to: RFAPLALSPVLPGRQ*PWLHGSKVSKPWEG Trigger: ACCCTCCCACGGCTTGGAGACCTTGGAGCCATGGAGCCATGGGCACTGCCTGCCTGGCAGCACTGGACTCAGGGCCAGGGGTGCAAACCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | TTCTCCTGCAGGCTGAGCCTAGCCTGCTCATGCTCCACCTCCAGCTaGTGCCGGCGCTGGGCCACCTCCCGCATATGCTTCAGCACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: FSCRLSLACSCSTSS*CRRWATSRICFSTC Trigger: GCAGGTGCTGAAGCATATGCGGGAGGTGGCCCAGCGCCGGCAGCAGCTGGAGGTGGAGCATGAGCAGGCTAGGCTCAGCCTGCAGGAGAA 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | CTCTTGGCTTCTGCCTGGGCCTGCTGCAGCCTCCGGACCTCCTCCTaGTTCTCCTGCAGGCTGAGCCTAGCCTGCTCATGCTCCACCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LLASAWACCSLRTSS*FSCRLSLACSCSTS Trigger: GGAGGTGGAGCATGAGCAGGCTAGGCTCAGCCTGCAGGAGAAGCAGGAGGAGGTCCGGAGGCTGCAGCAGGCCCAGGCAGAAGCCAAGAG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | CGGCACCCACAGCCAGGCAACAGCGCAGAGGGTCTGAGCTGCCCTTaGTGGTTAGGGCCTGGACAGACACATGGAGAGGCCCAGTCCGCA | + |
|
Preference number: 5 (lower is better) Translates to: RHPQPGNSAEGLSCP*WLGPGQTHGEAQSA Trigger: TGCGGACTGGGCCTCTCCATGTGTCTGTCCAGGCCCTAACCAGCAAGGGCAGCTCAGACCCTCTGCGCTGTTGCCTGGCTGTGGGTGCCG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | GTGTCGGGGGTAAGGCACAGCCAGAGGCTCGCCAAGTCCCTCTGGTaGGGGGCTCAGACTGAGTTCATCTCCTGCGGCCTCCTCCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VSGVRHSQRLAKSLW*GAQTEFISCGLLLW Trigger: CCAGAGGAGGAGGCCGCAGGAGATGAACTCAGTCTGAGCCCCCCACCAGAGGGACTTGGCGAGCCTCTGGCTGTGCCTTACCCCCGACAC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | GCCCTCTGGACTCCCCAGTTTCTGTTGCCCGGGAGGGTGGCTCCTTaGTTCTGCCAATCGCACTGCGGCCTCTCCGCTCTGGCTCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ALWTPQFLLPGRVAP*FCQSHCGLSALAPL Trigger: AAGGGGAGCCAGAGCGGAGAGGCCGCAGTGCGATTGGCAGAACCAAGGAGCCACCCTCCCGGGCAACAGAAACTGGGGAGTCCAGAGGGC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGCCTCTCCGCCCAGAGTaGTCCTGCCCTCTGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: SAPWSPGSERMGSHRGQVPLRPE*SCPLDS Trigger: GGAGTCCAGAGGGCAGGACAACTCTGGGCGGAGAGG...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS TCA 90 bp | GGCCCGCCATTGCCAAGAAGCCGGCTGCAATGTTCTCGGGGGTCCTaGGGTCGCTTGCGGTTTGGGAGTTTCTCCGGGGAGCCACCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: GPPLPRSRLQCSRGS*GRLRFGSFSGEPPP Trigger: AGGAGGTGGCTCCCCGGAGAAACTCCCAAACCGCAAGCGACCTCAGGACCCCCGAGAACATTGCAGCCGGCTTCTTGGCAATGGCGGGCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | TGGACTCCCCAGTTTCTGTTGCCCGGGAGGGTGGCTCCTTGGTTCTaGCAATCGCACTGCGGCCTCTCCGCTCTGGCTCCCCTTTCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: WTPQFLLPGRVAPWF*QSHCGLSALAPLSP Trigger: GGGAGAAAGGGGAGCCAGAGCGGAGAGGCCGCAGTGCGATTGGCAGAACCAAGGAGCCACCCTCCCGGGCAACAGAAACTGGGGAGTCCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | GGCCCTGAGTCCAGTGCTGCCAGGCAGGCAGTGCCCATGGCTCCATaGCTCCAAGGTCTCCAAGCCGTGGGAGGGTTGTCAGTTGCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: GPESSAARQAVPMAP*LQGLQAVGGLSVAP Trigger: TGGAGCAACTGACAACCCTCCCACGGCTTGGAGACCTTGGAGCCATGGAGCCATGGGCACTGCCTGCCTGGCAGCACTGGACTCAGGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | CTCGGGCTCGCTGGCGAGCTAGAGCCTTACGGCACAACTCCAAACTaGATCCGGGTCGGGGCACAGGGGCACTCACCACCCTCATGTTCG | + |
|
Preference number: 5 (lower is better) Translates to: LGLAGELEPYGTTPN*IRVGAQGHSPPSCS Trigger: CGAACATGAGGGTGGTGAGTGCCCCTGTGCCCCGACCCGGATCCAGTTTGGAGTTGTGCCGTAAGGCTCTAGCTCGCCAGCGAGCCCGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS CCA 90 bp | CACCCACAGCCAGGCAACAGCGCAGAGGGTCTGAGCTGCCCTTGCTaGTTAGGGCCTGGACAGACACATGGAGAGGCCCAGTCCGCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: HPQPGNSAEGLSCPC*LGPGQTHGEAQSAG Trigger: ACCTGCGGACTGGGCCTCTCCATGTGTCTGTCCAGGCCCTAACCAGCAAGGGCAGCTCAGACCCTCTGCGCTGTTGCCTGGCTGTGGGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | GGGCCAAGTTGCTATTCCCCGGCACCCAGGCGATCTCAGCAGATGTaGCTGTCAGCCGATGGATCCGCAGCTGGCTGGGTACCACCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: GPSCYSPAPRRSQQM*LSADGSAAGWVPPQ Trigger: CTGGGGTGGTACCCAGCCAGCTGCGGATCCATCGGCTGACAGCCACATCTGCTGAGATCGCCTGGGTGCCGGGGAATAGCAACTTGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | AGGGCTGGGGCAACGGGGGCCGGGATGGAGTCACTGGACTCGCCATaGGGTGACATAGTGCGTACAGTCACCTCATGGCAGGCCTGCAAC | + |
|
Preference number: 5 (lower is better) Translates to: RAGATGAGMESLDSP*GDIVRTVTSWQACN Trigger: GTTGCAGGCCTGCCATGAGGTGACTGTACGCACTATGTCACCCCATGGCGAGTCCAGTGACTCCATCCCGGCCCCCGTTGCCCCAGCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGGGTCTGAGCTGCCCTaGCTGGTTAGGGCCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: SAPWSPGSERMGSHRGQVGSELP*LVRAWT Trigger: TGTCCAGGCCCTAACCAGCAAGGGCAGCTCAGACCC...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | CCAGCCAGTGAGTTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAAGGCTGGCTAGGGTCTaGGGAAGTGCGGCTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PASELIQGHFCLQDRRTARLARV*GSAAGP Trigger: GGGCCCAGCCGCACTTCCCAAGACCCTAGCCAGCCT...TGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | GCTTGCGGTTTGGGAGTTTCTCCGGGGAGCCACCTCCTCTCCTCCTaGCGTTTCCACCAACGACTCCCAGCACATCCTCCAGGTGCTCCC | + |
|
Preference number: 5 (lower is better) Translates to: ACGLGVSPGSHLLSS*RFHQRLPAHPPGAP Trigger: GGGAGCACCTGGAGGATGTGCTGGGAGTCGTTGGTGGAAACGGCAGGAGGAGAGGAGGTGGCTCCCCGGAGAAACTCCCAAACCGCAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | TCACAGCCCGGCCCTAGCAACGCAAGTTCAGGCTGGCTAGGGTCTTaGGAAGTGCGGCTGGGCCCTGGTTTCTCCAGCCCTTCCTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SQPGPSNASSGWLGS*EVRLGPGFSSPSSS Trigger: AGAGGAGGAAGGGCTGGAGAAACCAGGGCCCAGCCGCACTTCCCAAGACCCTAGCCAGCCTGAACTTGCGTTGCTAGGGCCGGGCTGTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | AAGCCGGCTGCAATGTTCTCGGGGGTCCTGAGGTCGCTTGCGGTTTaGGAGTTTCTCCGGGGAGCCACCTCCTCTCCTCCTGCCGTTTCC | + |
|
Preference number: 5 (lower is better) Translates to: KPAAMFSGVLRSLAV*EFLRGATSSPPAVS Trigger: GGAAACGGCAGGAGGAGAGGAGGTGGCTCCCCGGAGAAACTCCCAAACCGCAAGCGACCTCAGGACCCCCGAGAACATTGCAGCCGGCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGCTGGGTCAGCTCTCCTaGGGTGGAGCAAGGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: SAPWSPGSERMGSHRGQVLGQLS*GGARYR Trigger: CCTGTACCTTGCTCCACCCAAGGAGAGCTGACCCAG...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAGGCTGGCTAGGGTCTaGGGAAGTGCGGCTGGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKRLARV*GSAAGP Trigger: GGGCCCAGCCGCACTTCCCAAGACCCTAGCCAGCCT...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAATGAGGTGGTGCTTCTaGGGGGCTCCTTGGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: AQCQPGGTGGPCMVILGSMRWCF*GAPWRG Trigger: GCCCCTCCAAGGAGCCCCCAAGAAGCACCACCTCAT...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGGGCCTTCCAGGAAGTaGGATGGAACCAGGCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SAPWSPGSERMGSHRGQVGPSRK*DGTRPL Trigger: AAGGGGCCTGGTTCCATCCAACTTCCTGGAAGGCCC...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS TCA 90 bp | CCAGCAATGCTTGGAGATGCATCTCCAGGTTTGCACCCCTGGCCCTaGGTCCAGTGCTGCCAGGCAGGCAGTGCCCATGGCTCCATGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PAMLGDASPGLHPWP*VQCCQAGSAHGSMA Trigger: AGCCATGGAGCCATGGGCACTGCCTGCCTGGCAGCACTGGACTCAGGGCCAGGGGTGCAAACCTGGAGATGCATCTCCAAGCATTGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | TCCTCCTCCTCCAGCCCGGAACAGCTGTACCCAGGGCTCTCTGCTTaGTGCCCCAGCTTAGGCAGCCCGGTCTCTGTTGCTTCAGGATCA | + |
|
Preference number: 5 (lower is better) Translates to: SSSSSPEQLYPGLSA*CPSLGSPVSVASGS Trigger: TGATCCTGAAGCAACAGAGACCGGGCTGCCTAAGCTGGGGCAGCAAGCAGAGAGCCCTGGGTACAGCTGTTCCGGGCTGGAGGAGGAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | GAGCAAGGTACAGGGCCAGCATCTCCTGAAGTGCACTCCACTTCCTaGTTAGCCAGGGAAGGAGCCACAGGCTCAGGGCCTTCCTGGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EQGTGPASPEVHSTS*LAREGATGSGPSWP Trigger: GGGCCAGGAAGGCCCTGAGCCTGTGGCTCCTTCCCTGGCTAAGCAGGAAGTGGAGTGCACTTCAGGAGATGCTGGCCCTGTACCTTGCTC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000144502.8 |
||
| CDS-3UTR CAA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCCAGCTGCTGCACCCTTaGCTGCTTCTCTGGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVQLLHP*LLLWFP Trigger: AGGGAACCAGAGAAGCAGCAAAGGGTGCAGCAGCTG...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGCATGACTTGGGGCTGTaGTGGATGGACTCTGAGCGA | + |
|
Preference number: 5 (lower is better) Translates to: GPLGLRGWDHTEARWPGQHDLGL*WMDSER Trigger: TCGCTCAGAGTCCATCCACAACAGCCCCAAGTCATG...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCGGGTCTGAGCTGCCCTaGCTGGTTAGGGCCTGGACA | + |
|
Preference number: 5 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSGSELP*LVRAWT Trigger: TGTCCAGGCCCTAACCAGCAAGGGCAGCTCAGACCC...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGGTAACCCGGACACCATaGGAGGTACCAGCAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: GPLGLRGWDHTEARWPGQVTRTP*EVPAAS Trigger: TGATGCTGCTGGTACCTCCAATGGTGTCCGGGTTAC...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGTTCTCCCTGATGCTGTaGCCAGCAACCTGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GPLGLRGWDHTEARWPGQFSLML*PATCFW Trigger: CCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAA...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCCAGTGAGTTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGGGTCTGGCTGGGGCTaGGCTCCATTCTCCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: PASELIQGHFCLQDRRTAGSGWG*APFSLM Trigger: CATCAGGGAGAATGGAGCCAAGCCCCAGCCAGACCC...TGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGCTTCTTGGGGGCTCCTaGGAGGGGCCAGCTCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKLLGGS*EGPAQW Trigger: CCACTGAGCTGGCCCCTCCAAGGAGCCCCCAAGAAG...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS TCA 90 bp | TCTCGAACCCGGGCCTGCATGGAATCCAAGGTAGACTCCAGCAGCTaGACGGCTCCCTCATGTTCCCTCTTGGCTTCTGCCTGGGCCTGC | + |
|
Preference number: 5 (lower is better) Translates to: SRTRACMESKVDSSS*TAPSCSLLASAWAC Trigger: GCAGGCCCAGGCAGAAGCCAAGAGGGAACATGAGGGAGCCGTTCAGCTGCTGGAGTCTACCTTGGATTCCATGCAGGCCCGGGTTCGAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS TCA 90 bp | AGGGCCTTCCTGGCCCAGAGTTGGCTCGATAGCCCTCTTCTCTTCTaGGATGCTCCGCACAGCTGCCCCAGCCTCTTCCTGAGAGCAAGG | + |
|
Preference number: 5 (lower is better) Translates to: RAFLAQSWLDSPLLF*DAPHSCPSLFLRAR Trigger: CCTTGCTCTCAGGAAGAGGCTGGGGCAGCTGTGCGGAGCATCTCAGAAGAGAAGAGGGCTATCGAGCCAACTCTGGGCCAGGAAGGCCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000144502.8 |
||
| CDS GCA 90 bp | GGTGACATAGTGCGTACAGTCACCTCATGGCAGGCCTGCAACAGCTaGAGCTGGGACACCTCCACCAGCACACTGCCTGCTGTGGGGGAA | + |
|
Preference number: 5 (lower is better) Translates to: GDIVRTVTSWQACNS*SWDTSTSTLPAVGE Trigger: TTCCCCCACAGCAGGCAGTGTGCTGGTGGAGGTGTCCCAGCTGCAGCTGTTGCAGGCCTGCCATGAGGTGACTGTACGCACTATGTCACC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | TCGCCATGGGGTGACATAGTGCGTACAGTCACCTCATGGCAGGCCTaGAACAGCTGCAGCTGGGACACCTCCACCAGCACACTGCCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SPWGDIVRTVTSWQA*NSCSWDTSTSTLPA Trigger: AGCAGGCAGTGTGCTGGTGGAGGTGTCCCAGCTGCAGCTGTTGCAGGCCTGCCATGAGGTGACTGTACGCACTATGTCACCCCATGGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGGCCTGGGCAGGCAGCCCGGTCTCTGTaGCTTCAGGATCAGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: GPLGLRGWDHTEARWPGQAARSL*LQDQYF Trigger: GAAATACTGATCCTGAAGCAACAGAGACCGGGCTGC...CTGCCCAGGCCACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAACGCGCTCTACAAAGTaGGAAGGGACCAGGCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: AQCQPGGTGGPCMVILGSTRSTK*EGTRPL Trigger: AAGGGGCCTGGTCCCTTCCAACTTTGTAGAGCGCGT...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTCCTCTCCGCCCAGAGTaGTCCTGCCCTCTGGACTCC | + |
|
Preference number: 5 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGPLRPE*SCPLDS Trigger: GGAGTCCAGAGGGCAGGACAACTCTGGGCGGAGAGG...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCTTCTTGGGGGCTCCTaGGAGGGGCCAGCTCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: LIQGHFCLQDRRTAASVFLLGGS*EGPAQW Trigger: CCACTGAGCTGGCCCCTCCAAGGAGCCCCCAAGAAG...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGCCGCTGGAGCAGCTGTaGTCTCCCTGCTGGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKPLEQL*SPCWTV Trigger: GACAGTCCAGCAGGGAGACAACAGCTGCTCCAGCGG...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | CCAGCCAGTGAGTTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGGGCCTTCCAGGAAGTaGGATGGAACCAGGCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: PASELIQGHFCLQDRRTAGPSRK*DGTRPL Trigger: AAGGGGCCTGGTTCCATCCAACTTCCTGGAAGGCCC...TGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS GCA 90 bp | AGGCCTGTCCCCGAAGCCTATGTTGAACTTGGCCTTATAAGCCTGTaGCTCCTCCTCCTCCAGCCCGGAACAGCTGTACCCAGGGCTCTC | + |
|
Preference number: 5 (lower is better) Translates to: RPVPEAYVELGLISL*LLLLQPGTAVPRAL Trigger: GAGAGCCCTGGGTACAGCTGTTCCGGGCTGGAGGAGGAGGAGGCACAGGCTTATAAGGCCAAGTTCAACATAGGCTTCGGGGACAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | TTGGCCAACAGTGCACTGGCTGTCTCACTGAGGTCTCGGGCTCGCTaGCGAGCTAGAGCCTTACGGCACAACTCCAAACTGGATCCGGGT | + |
|
Preference number: 5 (lower is better) Translates to: LANSALAVSLRSRAR*RARALRHNSKLDPG Trigger: ACCCGGATCCAGTTTGGAGTTGTGCCGTAAGGCTCTAGCTCGCCAGCGAGCCCGAGACCTCAGTGAGACAGCCAGTGCACTGTTGGCCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS CCA 90 bp | AGGCAACAGCGCAGAGGGTCTGAGCTGCCCTTGCTGGTTAGGGCCTaGACAGACACATGGAGAGGCCCAGTCCGCAGGTCCATGTTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: RQQRRGSELPLLVRA*TDTWRGPVRRSMFS Trigger: TGAAAACATGGACCTGCGGACTGGGCCTCTCCATGTGTCTGTCCAGGCCCTAACCAGCAAGGGCAGCTCAGACCCTCTGCGCTGTTGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | TCACTGGACTCGCCATGGGGTGACATAGTGCGTACAGTCACCTCATaGCAGGCCTGCAACAGCTGCAGCTGGGACACCTCCACCAGCACA | + |
|
Preference number: 5 (lower is better) Translates to: SLDSPWGDIVRTVTS*QACNSCSWDTSTST Trigger: TGTGCTGGTGGAGGTGTCCCAGCTGCAGCTGTTGCAGGCCTGCCATGAGGTGACTGTACGCACTATGTCACCCCATGGCGAGTCCAGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | GTCAAACAGAGCCACAAAGACCCTCACAGGCAGGTCCTGATGAGGTaGTGCTTCTTGGGGGCTCCTTGGAGGGGCCAGCTCAGTGGTACC | + |
|
Preference number: 5 (lower is better) Translates to: VKQSHKDPHRQVLMR*CFLGAPWRGQLSGT Trigger: GGTACCACTGAGCTGGCCCCTCCAAGGAGCCCCCAAGAAGCACCACCTCATCAGGACCTGCCTGTGAGGGTCTTTGTGGCTCTGTTTGAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 ENSMUST00000144502.8 |
||
| CDS-3UTR CAA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAGTAACCCGGACACCATaGGAGGTACCAGCAGCATCA | + |
|
Preference number: 5 (lower is better) Translates to: AQCQPGGTGGPCMVILGSVTRTP*EVPAAS Trigger: TGATGCTGCTGGTACCTCCAATGGTGTCCGGGTTAC...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGCTGGGTCAGCTCTCCTaGGGTGGAGCAAGGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKLGQLS*GGARYR Trigger: CCTGTACCTTGCTCCACCCAAGGAGAGCTGACCCAG...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTGGGTCTGGCTGGGGCTaGGCTCCATTCTCCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: LIQGHFCLQDRRTAASVFGSGWG*APFSLM Trigger: CATCAGGGAGAATGGAGCCAAGCCCCAGCCAGACCC...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGGCGTTGGGGCCTGGATaGACCTTCGGAGGTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: GVDENRLGIQRRGSSPDLALGPG*TFGGPL Trigger: CAGGGGACCTCCGAAGGTCAATCCAGGCCCCAACGC...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCACTCCCCAGTTTCTGTaGCCCGGGAGGGTGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSTPQFL*PGRVAP Trigger: AGGAGCCACCCTCCCGGGCAACAGAAACTGGGGAGT...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCACTTCTTGGGGGCTCCTaGGAGGGGCCAGCTCAGTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSFECQSAQRSGVGFPCPLLGGS*EGPAQW Trigger: CCACTGAGCTGGCCCCTCCAAGGAGCCCCCAAGAAG...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCGCTGGAGCAGCTGTaGTCTCCCTGCTGGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: LIQGHFCLQDRRTAASVFPLEQL*SPCWTV Trigger: GACAGTCCAGCAGGGAGACAACAGCTGCTCCAGCGG...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS TCA 90 bp | CCAGCCCTTCCTCCTCTTCCTCCTCCTCTTCCTCCTCAGGGATGCTaGACAGCTTCTTGCTGCAGAGCCGCTGGAGAGGCAACTCCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: PALPPLPPPLPPQGC*TASCCRAAGEATPV Trigger: TACTGGAGTTGCCTCTCCAGCGGCTCTGCAGCAAGAAGCTGTTCAGCATCCCTGAGGAGGAAGAGGAGGAGGAAGAGGAGGAAGGGCTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | AGGGCTCTCTGCTTGCTGCCCCAGCTTAGGCAGCCCGGTCTCTGTTaGTTCAGGATCAGTATTTCCGACAGGTCCAGGGCTATGAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: RALCLLPQLRQPGLC*FRISISDRSRAMSS Trigger: GGAGCTCATAGCCCTGGACCTGTCGGAAATACTGATCCTGAAGCAACAGAGACCGGGCTGCCTAAGCTGGGGCAGCAAGCAGAGAGCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | GGGTCCTGGTTCAGCCTGTACATCCAGTGGGGCATCAGGCAGACCTaGTGGAAGTGTGGTGAACTGCAAGGTAGCAGCTCTCTGCTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSWFSLYIQWGIRQT*WKCGELQGSSSLLW Trigger: CCAGAGCAGAGAGCTGCTACCTTGCAGTTCACCACACTTCCAGCAGGTCTGCCTGATGCCCCACTGGATGTACAGGCTGAACCAGGACCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | GGCTGGGGCTTGGCTCCATTCTCCCTGATGCTGTTGCCAGCAACCTaGTTCTGGGAGGAACAAGGCCTGGAACCCAGTTCCTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: GWGLAPFSLMLLPAT*FWEEQGLEPSSSSS Trigger: AGAGGAAGAGGAACTGGGTTCCAGGCCTTGTTCCTCCCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAATGGAGCCAAGCCCCAGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | AAACAGAGCCACAAAGACCCTCACAGGCAGGTCCTGATGAGGTGGTaGTTCTTGGGGGCTCCTTGGAGGGGCCAGCTCAGTGGTACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: KQSHKDPHRQVLMRW*FLGAPWRGQLSGTR Trigger: TCTGGTACCACTGAGCTGGCCCCTCCAAGGAGCCCCCAAGAAGCACCACCTCATCAGGACCTGCCTGTGAGGGTCTTTGTGGCTCTGTTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 ENSMUST00000144502.8 |
||
| CDS CCA 90 bp | CGGGGCCTGAGCTGTGCGACGAATCAGCCAGCTCCCGAGGGAGGGTaGACAGAAGATCATCATCAGACACGCGCTCTACAAAGTTGGAAG | + |
|
Preference number: 5 (lower is better) Translates to: RGLSCATNQPAPEGG*TEDHHQTRALQSWK Trigger: CTTCCAACTTTGTAGAGCGCGTGTCTGATGATGATCTTCTGTCCACCCTCCCTCGGGAGCTGGCTGATTCGTCGCACAGCTCAGGCCCCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | ACTTCCTGCTTAGCCAGGGAAGGAGCCACAGGCTCAGGGCCTTCCTaGCCCAGAGTTGGCTCGATAGCCCTCTTCTCTTCTGAGATGCTC | + |
|
Preference number: 5 (lower is better) Translates to: TSCLAREGATGSGPS*PRVGSIALFSSEML Trigger: GAGCATCTCAGAAGAGAAGAGGGCTATCGAGCCAACTCTGGGCCAGGAAGGCCCTGAGCCTGTGGCTCCTTCCCTGGCTAAGCAGGAAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000144502.8 |
||
| CDS-3UTR CAA 90 bp | TCTGCCCCCTGGTCCCCTGGGTCTGAGAGGATGGGATCACACAGAGGCCAGGTGAAGGCAGCAATCTGTTaGTCCTTGGCCAACAGTGCA | + |
|
Preference number: 5 (lower is better) Translates to: SAPWSPGSERMGSHRGQVKAAIC*SLANSA Trigger: TGCACTGTTGGCCAAGGACAAACAGATTGCTGCCTT...CACCTGGCCTCTGTGTGATCCCATCCTCTCAGACCCAGGGGACCAGGGGGCAGA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS-3UTR CAA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAGCGTTGGGGCCTGGATaGACCTTCGGAGGTCCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKALGPG*TFGGPL Trigger: CAGGGGACCTCCGAAGGTCAATCCAGGCCCCAACGC...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTATGAGGTGGTGCTTCTaGGGGGCTCCTTGGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTMRWCF*GAPWRG Trigger: GCCCCTCCAAGGAGCCCCCAAGAAGCACCACCTCAT...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCAAAACACCTTGAGGAGTaGGCCCTCCTTAAAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AQCQPGGTGGPCMVILGSKHLEE*ALLKGQ Trigger: CTGCCCTTTAAGGAGGGCCAACTCCTCAAGGTGTTT...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCTTGTCTCCAAACACCTaGAGGAGTTGGCCCTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVLSPNT*RSWPSL Trigger: TAAGGAGGGCCAACTCCTCAAGGTGTTTGGAGACAA...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS GCA 90 bp | CACAGGGGCACTCACCACCCTCATGTTCGTTTCCTGCAGCTTCTGTaGCCTCTCCTCCAGGCGCTTGGCAATGACTGCCAGTTCAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: HRGTHHPHVRFLQLL*PLLQALGNDCQFSI Trigger: AATGCTGAACTGGCAGTCATTGCCAAGCGCCTGGAGGAGAGGGCACAGAAGCTGCAGGAAACGAACATGAGGGTGGTGAGTGCCCCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS GCA 90 bp | CCACTGGGGACCTTCCACCCTCATGTTCGTTTCCTGCAGCTTCTGTaGCCTCTCCTCCAGGCGCTTGGCAATGACTGCCAGTTCAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: PLGTFHPHVRFLQLL*PLLQALGNDCQFSI Trigger: AATGCTGAACTGGCAGTCATTGCCAAGCGCCTGGAGGAGAGGGCACAGAAGCTGCAGGAAACGAACATGAGGGTGGAAGGTCCCCAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | CCTCAAAGGGGTTGTAGCTATAGCGTGCTAGGAAGACCTGGATTCTaGCTCCTCCCGAGTGACTCTCCGGAGCTGCTGGGAGCAGGGAAA | + |
|
Preference number: 5 (lower is better) Translates to: PQRGCSYSVLGRPGF*LLPSDSPELLGAGK Trigger: TTTCCCTGCTCCCAGCAGCTCCGGAGAGTCACTCGGGAGGAGCCAGAATCCAGGTCTTCCTAGCACGCTATAGCTACAACCCCTTTGAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | AGAGGGTCTGAGCTGCCCTTGCTGGTTAGGGCCTGGACAGACACATaGAGAGGCCCAGTCCGCAGGTCCATGTTTTCAAGCACAGCTTTG | + |
|
Preference number: 5 (lower is better) Translates to: RGSELPLLVRAWTDT*RGPVRRSMFSSTAL Trigger: CAAAGCTGTGCTTGAAAACATGGACCTGCGGACTGGGCCTCTCCATGTGTCTGTCCAGGCCCTAACCAGCAAGGGCAGCTCAGACCCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | TCCTGGTTCAGCCTGTACATCCAGTGGGGCATCAGGCAGACCTGCTaGAAGTGTGGTGAACTGCAAGGTAGCAGCTCTCTGCTCTGGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SWFSLYIQWGIRQTC*KCGELQGSSSLLWP Trigger: AGGCCAGAGCAGAGAGCTGCTACCTTGCAGTTCACCACACTTCCAGCAGGTCTGCCTGATGCCCCACTGGATGTACAGGCTGAACCAGGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | GGTGACAGGGAGCCAACTGATCATCAAGATTCCAGGAGAGGGTCCTaGTTCAGCCTGTACATCCAGTGGGGCATCAGGCAGACCTGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GDREPTDHQDSRRGS*FSLYIQWGIRQTCW Trigger: CCAGCAGGTCTGCCTGATGCCCCACTGGATGTACAGGCTGAACCAGGACCCTCTCCTGGAATCTTGATGATCAGTTGGCTCCCTGTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCCTCTCCTCCAGGCGCTaGGCAATGACTGCCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSLSSRR*AMTASS Trigger: TGAACTGGCAGTCATTGCCAAGCGCCTGGAGGAGAG...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | CCAGCCAGTGAGTTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCAATCTGTTTGTCCTaGGCCAACAGTGCACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PASELIQGHFCLQDRRTAAICLS*ANSALA Trigger: AGCCAGTGCACTGTTGGCCAAGGACAAACAGATTGC...TGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS-3UTR CAA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTCAGCTGCTGCACCCTTaGCTGCTTCTCTGGTTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGQLLHP*LLLWFP Trigger: AGGGAACCAGAGAAGCAGCAAAGGGTGCAGCAGCTG...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCACATTTCTTTCGCTTCTaGCAGAGCTCAGACTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: AQCQPGGTGGPCMVILGSHFFRF*QSSDSS Trigger: GCTGGAGTCTGAGCTCTGCAAGAAGCGAAAGAAATG...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGAGCAGGGAAGGCCAAGAAGGGACCTACAGAGCGTGGTAGCAAAGCAGGAGTAGGTGTGGGACATGACTaGGGGCTGTTGTGGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: GAGKAKKGPTERGSKAGVGVGHD*GLLWMD Trigger: GTCCATCCACAACAGCCCCAAGTCATGTCCCACACC...TACTCCTGCTTTGCTACCACGCTCTGTAGGTCCCTTCTTGGCCTTCCCTGCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCGGTGTGGGACATGACTaGGGGCTGTTGTGGATGGAC | + |
|
Preference number: 5 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSGVGHD*GLLWMD Trigger: GTCCATCCACAACAGCCCCAAGTCATGTCCCACACC...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCATCCTCCTGGGGTCCTTaGGACATCTCTATGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: AQCQPGGTGGPCMVILGSSSWGP*DISMER Trigger: TCTTTCCATAGAGATGTCCAAAGGACCCCAGGAGGA...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCACTGGGTCAGCTCTCCTaGGGTGGAGCAAGGTACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSFECQSAQRSGVGFPCPLGQLS*GGARYR Trigger: CCTGTACCTTGCTCCACCCAAGGAGAGCTGACCCAG...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGTTCTCCCTGATGCTGTaGCCAGCAACCTGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKFSLML*PATCFW Trigger: CCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAA...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAACTCCCCAGTTTCTGTaGCCCGGGAGGGTGGCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKTPQFL*PGRVAP Trigger: AGGAGCCACCCTCCCGGGCAACAGAAACTGGGGAGT...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAATGAGGTGGTGCTTCTaGGGGGCTCCTTGGAGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKMRWCF*GAPWRG Trigger: GCCCCTCCAAGGAGCCCCCAAGAAGCACCACCTCAT...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | GGCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCCAGGGTTCGGTGACATaGATACAGGGTCATAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GTVPAWGHWRPLYGDSGVQGSVT*IQGHSQ Trigger: TTGACTATGACCCTGTATCAATGTCACCGAACCCTG...GACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS TCA 90 bp | TCGTTTCCTGCAGCTTCTGTGCCCTCTCCTCCAGGCGCTTGGCAATaGCTGCCAGTTCAGCATTCTTCCGCTTCAGCCTCCGTACCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SFPAASVPSPPGAWQ*LPVQHSSASASVPS Trigger: AGAAGGTACGGAGGCTGAAGCGGAAGAATGCTGAACTGGCAGTCATTGCCAAGCGCCTGGAGGAGAGGGCACAGAAGCTGCAGGAAACGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS TCA 90 bp | TGTGTGCTGAGGAGTACACAGAGGGACCATTTCCTGAGGCCTCGGTaGGAACATTTGGGGGCAAGAAACCCCGCTGGAGCAGCTGTTGTC | + |
|
Preference number: 5 (lower is better) Translates to: CVLRSTQRDHFLRPR*EHLGARNPAGAAVV Trigger: GACAACAGCTGCTCCAGCGGGGTTTCTTGCCCCCAAATGTTCTCACCGAGGCCTCAGGAAATGGTCCCTCTGTGTACTCCTCAGCACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000133645.2 ENSMUST00000142329.8 |
||
| CDS GCA 90 bp | TCCTTTAACCTGCAGAGCTGTCGGAGTACCAGCAATGCTTGGAGATaGATCTCCAGGTTTGCACCCCTGGCCCTGAGTCCAGTGCTGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SFNLQSCRSTSNAWR*ISRFAPLALSPVLP Trigger: TGGCAGCACTGGACTCAGGGCCAGGGGTGCAAACCTGGAGATGCATCTCCAAGCATTGCTGGTACTCCGACAGCTCTGCAGGTTAAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | CCATGGCAGGCTTCAATACTTGGCTTCTTCTGGGTCAGCTCTCCTTaGGTGGAGCAAGGTACAGGGCCAGCATCTCCTGAAGTGCACTCC | + |
|
Preference number: 5 (lower is better) Translates to: PWQASILGFFWVSSP*VEQGTGPASPEVHS Trigger: GGAGTGCACTTCAGGAGATGCTGGCCCTGTACCTTGCTCCACCCAAGGAGAGCTGACCCAGAAGAAGCCAAGTATTGAAGCCTGCCATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 ENSMUST00000144502.8 |
||
| CDS CCA 90 bp | TCTTCCTCCTCAGGGATGCTGAACAGCTTCTTGCTGCAGAGCCGCTaGAGAGGCAACTCCAGTATCTGCTCCAAGATCTCCTCGTCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SSSSGMLNSFLLQSR*RGNSSICSKISSSL Trigger: CAGCGACGAGGAGATCTTGGAGCAGATACTGGAGTTGCCTCTCCAGCGGCTCTGCAGCAAGAAGCTGTTCAGCATCCCTGAGGAGGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCGAGTACCAGCAATGCTaGGAGATGCATCTCCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSEYQQC*EMHLQV Trigger: AACCTGGAGATGCATCTCCAAGCATTGCTGGTACTC...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | ACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGAAAAGCAGGTTCAGAAGATTaGGGGGTGCAGCGTCCTGGG | + |
|
Preference number: 5 (lower is better) Translates to: TRVGGEGSIKHLPPQRRKAGSED*GVQRPG Trigger: CCCAGGACGCTGCACCCCCAAATCTTCTGAACCTGC...TTTTCTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGACGCGCTCTACAAAGTaGGAAGGGACCAGGCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: GVDENRLGIQRRGSSPDLTRSTK*EGTRPL Trigger: AAGGGGCCTGGTCCCTTCCAACTTTGTAGAGCGCGT...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | ACAGACGGACGGCAGCCTCAGTCTTTCCTGGAGCCCAGCCTTTTGAGAAGTTCCCTGTGGGCTAACTGCTaGAGAACCGTGATGTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: TDGRQPQSFLEPSLLRSSLWANC*RTVMCR Trigger: CCGACACATCACGGTTCTCAAGCAGTTAGCCCACAG...GGAACTTCTCAAAAGGCTGGGCTCCAGGAAAGACTGAGGCTGCCGTCCGTCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCTGTGGGCTAACTGCTaGAGAACCGTGATGTGTCGG | + |
|
Preference number: 5 (lower is better) Translates to: LIQGHFCLQDRRTAASVFLWANC*RTVMCR Trigger: CCGACACATCACGGTTCTCAAGCAGTTAGCCCACAG...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCCTCCTCCTGGGGTCCTTaGGACATCTCTATGGAAAGA | + |
|
Preference number: 5 (lower is better) Translates to: DPGPLLSAGQTDGSLSLSSSWGP*DISMER Trigger: TCTTTCCATAGAGATGTCCAAAGGACCCCAGGAGGA...GGAAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | CCAGCCAGTGAGTTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAAAACCATCAGCGTCCTaGTCTCCAAACACCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: PASELIQGHFCLQDRRTAKPSAS*SPNTLR Trigger: CCTCAAGGTGTTTGGAGACAAGGACGCTGATGGTTT...TGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAACTCACTGGCTGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | GGAGACCAGGGTAGGGGGCGAGGGTTCAATCAAACATCTCCCACCACAGCGAAGCCAGTTTCTGTTGCCTaGGCTCCATTCTCCCTGATG | + |
|
Preference number: 5 (lower is better) Translates to: GDQGRGRGFNQTSPTTAKPVSVA*APFSLM Trigger: CATCAGGGAGAATGGAGCCAAGGCAACAGAAACTGG...CTTCGCTGTGGTGGGAGATGTTTGATTGAACCCTCGCCCCCTACCCTGGTCTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000142329.8 |
||
| CDS GCA 90 bp | TCTGTTGCCTTGGCTCCATTCTCCCTGATGCTGTTGCCAGCAACCTaGTTCTGGGAGGAACAAGGCCTGGAACCCAGTTCCTCTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: SVALAPFSLMLLPAT*FWEEQGLEPSSSSS Trigger: AGAGGAAGAGGAACTGGGTTCCAGGCCTTGTTCCTCCCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAATGGAGCCAAGGCAACAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000142329.8 ENSMUST00000144502.8 |
||
| CDS CCA 90 bp | CCTCAATCCTTTAACCTGCAGAGCTGTCGGAGTACCAGCAATGCTTaGAGATGCATCTCCAGGTTTGCACCCCTGGCCCTGAGTCCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: PQSFNLQSCRSTSNA*RCISRFAPLALSPV Trigger: CACTGGACTCAGGGCCAGGGGTGCAAACCTGGAGATGCATCTCCAAGCATTGCTGGTACTCCGACAGCTCTGCAGGTTAAAGGATTGAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | CATCAAGATTCCAGGAGAGGGTCCTGGTTCAGCCTGTACATCCAGTaGGGCATCAGGCAGACCTGCTGGAAGTGTGGTGAACTGCAAGGT | + |
|
Preference number: 5 (lower is better) Translates to: HQDSRRGSWFSLYIQ*GIRQTCWKCGELQG Trigger: ACCTTGCAGTTCACCACACTTCCAGCAGGTCTGCCTGATGCCCCACTGGATGTACAGGCTGAACCAGGACCCTCTCCTGGAATCTTGATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGGCCTCTGGATTCTCATaGGGACCCTCAAAGGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: GVDENRLGIQRRGSSPDLASGFS*GPSKGL Trigger: CAACCCCTTTGAGGGTCCCAATGAGAATCCAGAGGC...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGATGCTGAACAGCTTCTaGCTGCAGAGCCGCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GVDENRLGIQRRGSSPDLMLNSF*LQSRWR Trigger: TCTCCAGCGGCTCTGCAGCAAGAAGCTGTTCAGCAT...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCAATGCTGAACAGCTTCTaGCTGCAGAGCCGCTGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: GSFECQSAQRSGVGFPCPMLNSF*LQSRWR Trigger: TCTCCAGCGGCTCTGCAGCAAGAAGCTGTTCAGCAT...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTAAACACCTTGAGGAGTaGGCCCTCCTTAAAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: LIQGHFCLQDRRTAASVFKHLEE*ALLKGQ Trigger: CTGCCCTTTAAGGAGGGCCAACTCCTCAAGGTGTTT...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS GCA 90 bp | TTTCGCTTCTTGCAGAGCTCAGACTCCAGCTGCTGCACCCTTTGCTaGTTCTCTGGTTCCCTTAGGACTACCTGTGGGCTCTCCACATCA | + |
|
Preference number: 5 (lower is better) Translates to: FRFLQSSDSSCCTLC*FSGSLRTTCGLSTS Trigger: TGATGTGGAGAGCCCACAGGTAGTCCTAAGGGAACCAGAGAAGCAGCAAAGGGTGCAGCAGCTGGAGTCTGAGCTCTGCAAGAAGCGAAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | TTCTTTCGCTTCTTGCAGAGCTCAGACTCCAGCTGCTGCACCCTTTaGTGCTTCTCTGGTTCCCTTAGGACTACCTGTGGGCTCTCCACA | + |
|
Preference number: 5 (lower is better) Translates to: FFRFLQSSDSSCCTL*CFSGSLRTTCGLST Trigger: TGTGGAGAGCCCACAGGTAGTCCTAAGGGAACCAGAGAAGCAGCAAAGGGTGCAGCAGCTGGAGTCTGAGCTCTGCAAGAAGCGAAAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | TGGAGGTTCCTCCTGGGGTCCTTTGGACATCTCTATGGAAAGACTTaGAGAGAAATCTTGAGTTCCATGGGGGACAGGATGCCGGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: WRFLLGSFGHLYGKT*REILSSMGDRMPEG Trigger: CCCCTCCGGCATCCTGTCCCCCATGGAACTCAAGATTTCTCTGCAAGTCTTTCCATAGAGATGTCCAAAGGACCCCAGGAGGAACCTCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 90 bp | AACAGCTTCTTGCTGCAGAGCCGCTGGAGAGGCAACTCCAGTATCTaGTCCAAGATCTCCTCGTCGCTGTCAGTCTCACAAAAGGGGTCT | + |
|
Preference number: 5 (lower is better) Translates to: NSFLLQSRWRGNSSI*SKISSSLSVSQKGS Trigger: AGACCCCTTTTGTGAGACTGACAGCGACGAGGAGATCTTGGAGCAGATACTGGAGTTGCCTCTCCAGCGGCTCTGCAGCAAGAAGCTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | CTGGCTGTGTCCACCTCTGGTGTGGGACATGACTTGGGGCTGTTGTaGATGGACTCTGAGCGAGAAGAATTAGAAAGAGACTCGGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LAVSTSGVGHDLGLL*MDSEREELERDSAF Trigger: GAAGGCCGAGTCTCTTTCTAATTCTTCTCGCTCAGAGTCCATCCACAACAGCCCCAAGTCATGTCCCACACCAGAGGTGGACACAGCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | TCGGGAGGTTTTCTGGGCAGCAGAATGAATCAGCTTAGGAGGACCTaGACAGAGCTGTGTAGGACCTTCCAGCTCCACTTTCTTGGACCG | + |
|
Preference number: 5 (lower is better) Translates to: SGGFLGSRMNQLRRT*TELCRTFQLHFLGP Trigger: CGGTCCAAGAAAGTGGAGCTGGAAGGTCCTACACAGCTCTGTCCAGGTCCTCCTAAGCTGATTCATTCTGCTGCCCAGAAAACCTCCCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTGAGTACCAGCAATGCTaGGAGATGCATCTCCAGGTT | + |
|
Preference number: 5 (lower is better) Translates to: LIQGHFCLQDRRTAASVFEYQQC*EMHLQV Trigger: AACCTGGAGATGCATCTCCAAGCATTGCTGGTACTC...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTGCAGCCCGGTCTCTGTaGCTTCAGGATCAGTATTTC | + |
|
Preference number: 5 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTAARSL*LQDQYF Trigger: GAAATACTGATCCTGAAGCAACAGAGACCGGGCTGC...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCCCCAGGGCTCTCTGCTaGCTGCCCCAGCTTAGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPPRALC*LPQLRQ Trigger: CTGCCTAAGCTGGGGCAGCAAGCAGAGAGCCCTGGG...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 54% GC, longest homopolymer 8 nt, total homopolymer stretches 16 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCATTTCTTTCGCTTCTaGCAGAGCTCAGACTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LIQGHFCLQDRRTAASVFHFFRF*QSSDSS Trigger: GCTGGAGTCTGAGCTCTGCAAGAAGCGAAAGAAATG...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | AAGTTGAATCCAATGAGCAAAATAAGGCAAACCCAACTCCTGCTTTCTGCCCCCGGCCGAGTCCCTCTCTaGTGTCACCCCCAGGAGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KLNPMSKIRQTQLLLSAPGRVPL*CHPQEL Trigger: CAGCTCCTGGGGGTGACACAAGAGAGGGACTCGGCC...GGGGGCAGAAAGCAGGAGTTGGGTTTGCCTTATTTTGCTCATTGGATTCAACTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGAAACACCTTGAGGAGTaGGCCCTCCTTAAAGGGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVDENRLGIQRRGSSPDLKHLEE*ALLKGQ Trigger: CTGCCCTTTAAGGAGGGCCAACTCCTCAAGGTGTTT...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | CTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTAAGGGTAAACCATCAGCGTCCTaGTCTCCAAACACCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: LGLSSLWKSPSRGLLTKGKPSAS*SPNTLR Trigger: CCTCAAGGTGTTTGGAGACAAGGACGCTGATGGTTT...ACCCTTAGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS TCA 90 bp | TCAAATGCAGCCACCATAGGTCGGGAGGTTTTCTGGGCAGCAGAATaGATCAGCTTAGGAGGACCTGGACAGAGCTGTGTAGGACCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SNAATIGREVFWAAE*ISLGGPGQSCVGPS Trigger: GGAAGGTCCTACACAGCTCTGTCCAGGTCCTCCTAAGCTGATTCATTCTGCTGCCCAGAAAACCTCCCGACCTATGGTGGCTGCATTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS CCA 90 bp | TCTCAGGTTACAAAAGGTTGCCCAATATGTGCTGGGGCGAGCAGGTaGGCACTCTTCTCCATTGAGGTAGATGGCATGGGCCAAGTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: SQVTKGCPICAGASR*ALFSIEVDGMGQVA Trigger: AGCAACTTGGCCCATGCCATCTACCTCAATGGAGAAGAGTGCCCACCTGCTCGCCCCAGCACATATTGGGCAACCTTTTGTAACCTGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCAACTTGCAGAGAAATCTaGAGTTCCATGGGGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSFECQSAQRSGVGFPCPTCREI*SSMGDR Trigger: CCTGTCCCCCATGGAACTCAAGATTTCTCTGCAAGT...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGACTTGCAGAGAAATCTaGAGTTCCATGGGGGACAGG | + |
|
Preference number: 5 (lower is better) Translates to: GVDENRLGIQRRGSSPDLTCREI*SSMGDR Trigger: CCTGTCCCCCATGGAACTCAAGATTTCTCTGCAAGT...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GCACAGTGCCAGCCTGGGGGCACTGGAGGCCCTTGTATGGTGATTCTGGGGTCATCTCTATGGAAAGACTaGCAGAGAAATCTTGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: AQCQPGGTGGPCMVILGSSLWKD*QRNLEF Trigger: GAACTCAAGATTTCTCTGCAAGTCTTTCCATAGAGA...TGACCCCAGAATCACCATACAAGGGCCTCCAGTGCCCCCAGGCTGGCACTGTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | TTGATCCAGGGCCACTTCTGTCTGCAGGACAGACGGACGGCAGCCTCAGTCTTTCAGGGTTCGGTGACATaGATACAGGGTCATAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: LIQGHFCLQDRRTAASVFQGSVT*IQGHSQ Trigger: TTGACTATGACCCTGTATCAATGTCACCGAACCCTG...AAAGACTGAGGCTGCCGTCCGTCTGTCCTGCAGACAGAAGTGGCCCTGGATCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCATTGTCTCCAAACACCTaGAGGAGTTGGCCCTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GSFECQSAQRSGVGFPCPLSPNT*RSWPSL Trigger: TAAGGAGGGCCAACTCCTCAAGGTGTTTGGAGACAA...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGTTGTCTCCAAACACCTaGAGGAGTTGGCCCTCCTTA | + |
|
Preference number: 5 (lower is better) Translates to: GVDENRLGIQRRGSSPDLLSPNT*RSWPSL Trigger: TAAGGAGGGCCAACTCCTCAAGGTGTTTGGAGACAA...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | GGCTCCTTTGAGTGCCAGTCTGCTCAGAGATCAGGAGTTGGGTTTCCCTGTCCAAAACCATCAGCGTCCTaGTCTCCAAACACCTTGAGG | + |
|
Preference number: 5 (lower is better) Translates to: GSFECQSAQRSGVGFPCPKPSAS*SPNTLR Trigger: CCTCAAGGTGTTTGGAGACAAGGACGCTGATGGTTT...TGGACAGGGAAACCCAACTCCTGATCTCTGAGCAGACTGGCACTCAAAGGAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS GCA 90 bp | AGACTCTCGCATTTCTTTCGCTTCTTGCAGAGCTCAGACTCCAGCTaGTGCACCCTTTGCTGCTTCTCTGGTTCCCTTAGGACTACCTGT | + |
|
Preference number: 5 (lower is better) Translates to: RLSHFFRFLQSSDSS*CTLCCFSGSLRTTC Trigger: ACAGGTAGTCCTAAGGGAACCAGAGAAGCAGCAAAGGGTGCAGCAGCTGGAGTCTGAGCTCTGCAAGAAGCGAAAGAAATGCGAGAGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | GGAGTAGATGAGAACAGACTGGGAATCCAGAGGCGTGGGTCCAGTCCTGATCTGCAGGGTTCGGTGACATaGATACAGGGTCATAGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: GVDENRLGIQRRGSSPDLQGSVT*IQGHSQ Trigger: TTGACTATGACCCTGTATCAATGTCACCGAACCCTG...CAGATCAGGACTGGACCCACGCCTCTGGATTCCCAGTCTGTTCTCATCTACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS-3UTR CAA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCCCGCTGGAGCAGCTGTaGTCTCCCTGCTGGACTGTC | + |
|
Preference number: 5 (lower is better) Translates to: SEQGMYENSCINPSFPSAPLEQL*SPCWTV Trigger: GACAGTCCAGCAGGGAGACAACAGCTGCTCCAGCGG...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS TCA 90 bp | TCAAATGCAGCCACCATAGGTCGGGAGGTTTTCTGGGCAGCAGAATaGATCAGCTTAGGAGGACCTCTTCCCAGACACTTGCCCAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SNAATIGREVFWAAE*ISLGGPLPRHLPKD Trigger: ATCTTTGGGCAAGTGTCTGGGAAGAGGTCCTCCTAAGCTGATTCATTCTGCTGCCCAGAAAACCTCCCGACCTATGGTGGCTGCATTTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133645.2 |
||
| CDS GCA 90 bp | GCTCCCTCAGGCTTGGAACTCTCTTCAAACCTCAATCCTTTAACCTaGAGAGCTGTCGGAGTACCAGCAATGCTTGGAGATGCATCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: APSGLELSSNLNPLT*RAVGVPAMLGDASP Trigger: TGGAGATGCATCTCCAAGCATTGCTGGTACTCCGACAGCTCTGCAGGTTAAAGGATTGAGGTTTGAAGAGAGTTCCAAGCCTGAGGGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 90 bp | AGCAAGGGACTGGAGGTTCCTCCTGGGGTCCTTTGGACATCTCTATaGAAAGACTTGCAGAGAAATCTTGAGTTCCATGGGGGACAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: SKGLEVPPGVLWTSL*KDLQRNLEFHGGQD Trigger: ATCCTGTCCCCCATGGAACTCAAGATTTCTCTGCAAGTCTTTCCATAGAGATGTCCAAAGGACCCCAGGAGGAACCTCCAGTCCCTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCGGGCCTTCCAGGAAGTaGGATGGAACCAGGCCCCTT | + |
|
Preference number: 5 (lower is better) Translates to: SEQGMYENSCINPSFPSAGPSRK*DGTRPL Trigger: AAGGGGCCTGGTTCCATCCAACTTCCTGGAAGGCCC...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS GCA 90 bp | CTCCACATCCATATTGGGGGAGTTCTCCCGAGGATTATAGTCAAATaGAGCCACCATAGGTCGGGAGGTTTTCTGGGCAGCAGAATGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LHIHIGGVLPRIIVK*SHHRSGGFLGSRMN Trigger: ATTCATTCTGCTGCCCAGAAAACCTCCCGACCTATGGTGGCTGCATTTGACTATAATCCTCGGGAGAACTCCCCCAATATGGATGTGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000133645.2 ENSMUST00000142329.8 |
||
| CDS CCA 90 bp | CCTCTTCCTGAGAGCAAGGGACTGGAGGTTCCTCCTGGGGTCCTTTaGACATCTCTATGGAAAGACTTGCAGAGAAATCTTGAGTTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: PLPESKGLEVPPGVL*TSLWKDLQRNLEFH Trigger: ATGGAACTCAAGATTTCTCTGCAAGTCTTTCCATAGAGATGTCCAAAGGACCCCAGGAGGAACCTCCAGTCCCTTGCTCTCAGGAAGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCCTCTCCTCCAGGCGCTaGGCAATGACTGCCAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SEQGMYENSCINPSFPSALSSRR*AMTASS Trigger: TGAACTGGCAGTCATTGCCAAGCGCCTGGAGGAGAG...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS TCA 90 bp | GTCTCTGTTGCTTCAGGATCAGTATTTCCGACAGGTCCAGGGCTATaGGCTCCCTCAGGCTTGGAACTCTCTTCAAACCTCAATCCTTTA | + |
|
Preference number: 5 (lower is better) Translates to: VSVASGSVFPTGPGL*APSGLELSSNLNPL Trigger: TAAAGGATTGAGGTTTGAAGAGAGTTCCAAGCCTGAGGGAGCTCATAGCCCTGGACCTGTCGGAAATACTGATCCTGAAGCAACAGAGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCGCCTCTGGATTCTCATaGGGACCCTCAAAGGGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: SEQGMYENSCINPSFPSAASGFS*GPSKGL Trigger: CAACCCCTTTGAGGGTCCCAATGAGAATCCAGAGGC...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | CTTACTCTGGGGCTCAGTTCCCTCTGGAAGAGCCCATCTAGAGGACTCCTCACTTCTCTATGGAAAGACTaGCAGAGAAATCTTGAGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LTLGLSSLWKSPSRGLLTSLWKD*QRNLEF Trigger: GAACTCAAGATTTCTCTGCAAGTCTTTCCATAGAGA...AGTGAGGAGTCCTCTAGATGGGCTCTTCCAGAGGGAACTGAGCCCCAGAGTAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS-3UTR CAA 90 bp | TCTGAACAGGGAATGTATGAAAATAGCTGCATAAATCCGTCCTTTCCCTCAGCCTTCTCCCTGATGCTGTaGCCAGCAACCTGCTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SEQGMYENSCINPSFPSAFSLML*PATCFW Trigger: CCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAA...GGCTGAGGGAAAGGACGGATTTATGCAGCTATTTTCATACATTCCCTGTTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS CCA 72 bp | GGACCCGGGGACCGGGCAGGCCGGAGCGGCTCCCGCTaGTTGCGCAGGGCGATCTGCCTCTGCAGCCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GPGDRAGRSGSR*LRRAICLCSRS Trigger: GCTGCGGCTGCAGAGGCAGATCGCCCTGCGCAACCAGCGGGAGCCGCTCCGGCCTGCCCGGTCCCCGGGTCC 78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | CCGGGGACCGGGCAGGCCGGAGCGGCTCCCGCTGGTTaGGCAGGGCGATCTGCCTCTGCAGCCGCAGCACCT | + |
|
Preference number: 6 (lower is better) Translates to: PGTGQAGAAPAG*AGRSASAAAAP Trigger: AGGTGCTGCGGCTGCAGAGGCAGATCGCCCTGCGCAACCAGCGGGAGCCGCTCCGGCCTGCCCGGTCCCCGG 76% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | GGTGCCCTCAATCACAGGGAGGCTGCCCCTCTCCCGTaGAGGGACCGGCCGTGCAGAGGCCTGGGGCCCGCC | + |
|
Preference number: 6 (lower is better) Translates to: GALNHREAAPLP*RDRPCRGLGPA Trigger: GGCGGGCCCCAGGCCTCTGCACGGCCGGTCCCTCCACGGGAGAGGGGCAGCCTCCCTGTGATTGAGGGCACC 75% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | GGCCGGAGCGGCTCCCGCTGGTTGCGCAGGGCGATCTaGCTCTGCAGCCGCAGCACCTCCCGTTGGGACTCG | + |
|
Preference number: 6 (lower is better) Translates to: GRSGSRWLRRAI*LCSRSTSRWDS Trigger: CGAGTCCCAACGGGAGGTGCTGCGGCTGCAGAGGCAGATCGCCCTGCGCAACCAGCGGGAGCCGCTCCGGCC 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | CCCCTCTCCCGTGGAGGGACCGGCCGTGCAGAGGCCTaGGGCCCGCCATTGCCAAGAAGCCGGCTGCAATGT | + |
|
Preference number: 6 (lower is better) Translates to: PLSRGGTGRAEA*GPPLPRSRLQC Trigger: ACATTGCAGCCGGCTTCTTGGCAATGGCGGGCCCCAGGCCTCTGCACGGCCGGTCCCTCCACGGGAGAGGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CAA 72 bp | GGAGGGACCGGCCGTGCAGAGGCCTGGGGCCCGCCATaGCCAAGAAGCCGGCTGCAATGTTCTCGGGGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: GGTGRAEAWGPP*PRSRLQCSRGS Trigger: GGACCCCCGAGAACATTGCAGCCGGCTTCTTGGCAATGGCGGGCCCCAGGCCTCTGCACGGCCGGTCCCTCC 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | GAGGGACCGGCCGTGCAGAGGCCTGGGGCCCGCCATTaGCAAGAAGCCGGCTGCAATGTTCTCGGGGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: EGPAVQRPGARH*QEAGCNVLGGP Trigger: AGGACCCCCGAGAACATTGCAGCCGGCTTCTTGGCAATGGCGGGCCCCAGGCCTCTGCACGGCCGGTCCCTC 69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | CCTGTCCAACCCTGGTGCCCTCAATCACAGGGAGGCTaGCCCTCTCCCGTGGAGGGACCGGCCGTGCAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: PVQPWCPQSQGG*PSPVEGPAVQR Trigger: CCTCTGCACGGCCGGTCCCTCCACGGGAGAGGGGCAGCCTCCCTGTGATTGAGGGCACCAGGGTTGGACAGG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS TCA 72 bp | AGGCTGGGAGGCGCAGGTAGGCGTTGGGGCCTGGATTaGCCTTCGGAGGTCCCCTGGGCCTTCCTACTGCCG | + |
|
Preference number: 6 (lower is better) Translates to: RLGGAGRRWGLD*PSEVPWAFLLP Trigger: CGGCAGTAGGAAGGCCCAGGGGACCTCCGAAGGTCAATCCAGGCCCCAACGCCTACCTGCGCCTCCCAGCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | CCCGGGAGGGTGGCTCCTTGGTTCTGCCAATCGCACTaGGGCCTCTCCGCTCTGGCTCCCCTTTCTCCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: PGRVAPWFCQSH*GLSALAPLSPR Trigger: CCTGGGAGAAAGGGGAGCCAGAGCGGAGAGGCCGCAGTGCGATTGGCAGAACCAAGGAGCCACCCTCCCGGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | GTGGTACCAGACCTAGGCACCCGGGCCCCTCTCCTCTaGGGTCCTCTCCGCCCAGAGTTGTCCTGCCCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VVPDLGTRAPLL*GPLRPELSCPL Trigger: CAGAGGGCAGGACAACTCTGGGCGGAGAGGACCCCAGAGGAGAGGGGCCCGGGTGCCTAGGTCTGGTACCAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 ENSMUST00000144502.8 |
||
| CDS TCA 72 bp | ACCCCCGCCTCCACTCAGGAAACTGAGCTCGGGGCCTaGGCTGTGCGACGAATCAGCCAGCTCCCGAGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TPASTQETELGA*AVRRISQLPRE Trigger: CTCCCTCGGGAGCTGGCTGATTCGTCGCACAGCTCAGGCCCCGAGCTCAGTTTCCTGAGTGGAGGCGGGGGT 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | AGGCTGAGCCTAGCCTGCTCATGCTCCACCTCCAGCTaGTGCCGGCGCTGGGCCACCTCCCGCATATGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: RLSLACSCSTSS*CRRWATSRICF Trigger: GAAGCATATGCGGGAGGTGGCCCAGCGCCGGCAGCAGCTGGAGGTGGAGCATGAGCAGGCTAGGCTCAGCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | CAGAGGCCTGGGGCCCGCCATTGCCAAGAAGCCGGCTaGAATGTTCTCGGGGGTCCTGAGGTCGCTTGCGGT | + |
|
Preference number: 6 (lower is better) Translates to: QRPGARHCQEAG*NVLGGPEVACG Trigger: ACCGCAAGCGACCTCAGGACCCCCGAGAACATTGCAGCCGGCTTCTTGGCAATGGCGGGCCCCAGGCCTCTG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | GCCCTGAGTCCAGTGCTGCCAGGCAGGCAGTGCCCATaGCTCCATGGCTCCAAGGTCTCCAAGCCGTGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: ALSPVLPGRQCP*LHGSKVSKPWE Trigger: CTCCCACGGCTTGGAGACCTTGGAGCCATGGAGCCATGGGCACTGCCTGCCTGGCAGCACTGGACTCAGGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | ACCCAGGCGATCTCAGCAGATGTGGCTGTCAGCCGATaGATCCGCAGCTGGCTGGGTACCACCCCAGCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: TQAISADVAVSR*IRSWLGTTPAP Trigger: CGGGGCTGGGGTGGTACCCAGCCAGCTGCGGATCCATCGGCTGACAGCCACATCTGCTGAGATCGCCTGGGT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CAA 90 bp | TGCCCTCTGGACTCCCCAGTTTCTGTTGCCCGGGAGGGTGGCTCCTaGGTTCTGCCAATCGCACTGCGGCCTCTCCGCTCTGGCTCCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CPLDSPVSVAREGGS*VLPIALRPLRSGSP Trigger: AGGGGAGCCAGAGCGGAGAGGCCGCAGTGCGATTGGCAGAACCAAGGAGCCACCCTCCCGGGCAACAGAAACTGGGGAGTCCAGAGGGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS TCA 72 bp | GGGCGGGTGGTCCCCAAGGGCACTACAGCCCAAGGCTaGAGTAAGCAGATCCAGAGGGCCTGGGTGCAGACG | + |
|
Preference number: 6 (lower is better) Translates to: GRVVPKGTTAQG*SKQIQRAWVQT Trigger: CGTCTGCACCCAGGCCCTCTGGATCTGCTTACTTCAGCCTTGGGCTGTAGTGCCCTTGGGGACCACCCGCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | CTCCTCCAGCCCGGAACAGCTGTACCCAGGGCTCTCTaGTTGCTGCCCCAGCTTAGGCAGCCCGGTCTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: LLQPGTAVPRAL*LLPQLRQPGLC Trigger: ACAGAGACCGGGCTGCCTAAGCTGGGGCAGCAAGCAGAGAGCCCTGGGTACAGCTGTTCCGGGCTGGAGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | CAGTTTCTGTTGCCCGGGAGGGTGGCTCCTTGGTTCTaGCAATCGCACTGCGGCCTCTCCGCTCTGGCTCCC | + |
|
Preference number: 6 (lower is better) Translates to: QFLLPGRVAPWF*QSHCGLSALAP Trigger: GGGAGCCAGAGCGGAGAGGCCGCAGTGCGATTGGCAGAACCAAGGAGCCACCCTCCCGGGCAACAGAAACTG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | GCTGGCGAGCTAGAGCCTTACGGCACAACTCCAAACTaGATCCGGGTCGGGGCACAGGGGCACTCACCACCC | + |
|
Preference number: 6 (lower is better) Translates to: AGELEPYGTTPN*IRVGAQGHSPP Trigger: GGGTGGTGAGTGCCCCTGTGCCCCGACCCGGATCCAGTTTGGAGTTGTGCCGTAAGGCTCTAGCTCGCCAGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS CCA 72 bp | CGCAGAGGGTCTGAGCTGCCCTTGCTGGTTAGGGCCTaGACAGACACATGGAGAGGCCCAGTCCGCAGGTCC | + |
|
Preference number: 6 (lower is better) Translates to: RRGSELPLLVRA*TDTWRGPVRRS Trigger: GGACCTGCGGACTGGGCCTCTCCATGTGTCTGTCCAGGCCCTAACCAGCAAGGGCAGCTCAGACCCTCTGCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | CTTGGTTCTGCCAATCGCACTGCGGCCTCTCCGCTCTaGCTCCCCTTTCTCCCAGGCTGGGAGGCGCAGGTA | + |
|
Preference number: 6 (lower is better) Translates to: LGSANRTAASPL*LPFLPGWEAQV Trigger: TACCTGCGCCTCCCAGCCTGGGAGAAAGGGGAGCCAGAGCGGAGAGGCCGCAGTGCGATTGGCAGAACCAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | TCTGGGGTCCTCTCCGCCCAGAGTTGTCCTGCCCTCTaGACTCCCCAGTTTCTGTTGCCCGGGAGGGTGGCT | + |
|
Preference number: 6 (lower is better) Translates to: SGVLSAQSCPAL*TPQFLLPGRVA Trigger: AGCCACCCTCCCGGGCAACAGAAACTGGGGAGTCCAGAGGGCAGGACAACTCTGGGCGGAGAGGACCCCAGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CAA 72 bp | CTCCAGCCCGGAACAGCTGTACCCAGGGCTCTCTGCTaGCTGCCCCAGCTTAGGCAGCCCGGTCTCTGTTGC | + |
|
Preference number: 6 (lower is better) Translates to: LQPGTAVPRALC*LPQLRQPGLCC Trigger: GCAACAGAGACCGGGCTGCCTAAGCTGGGGCAGCAAGCAGAGAGCCCTGGGTACAGCTGTTCCGGGCTGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS TCA 72 bp | CTTGGAGATGCATCTCCAGGTTTGCACCCCTGGCCCTaGGTCCAGTGCTGCCAGGCAGGCAGTGCCCATGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGDASPGLHPWP*VQCCQAGSAHG Trigger: GCCATGGGCACTGCCTGCCTGGCAGCACTGGACTCAGGGCCAGGGGTGCAAACCTGGAGATGCATCTCCAAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS TCA 72 bp | GGGGGCCGGGATGGAGTCACTGGACTCGCCATGGGGTaGCATAGTGCGTACAGTCACCTCATGGCAGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: GGRDGVTGLAMG*HSAYSHLMAGL Trigger: CAGGCCTGCCATGAGGTGACTGTACGCACTATGTCACCCCATGGCGAGTCCAGTGACTCCATCCCGGCCCCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | TCCAGCCCGGAACAGCTGTACCCAGGGCTCTCTGCTTaGTGCCCCAGCTTAGGCAGCCCGGTCTCTGTTGCT | + |
|
Preference number: 6 (lower is better) Translates to: SSPEQLYPGLSA*CPSLGSPVSVA Trigger: AGCAACAGAGACCGGGCTGCCTAAGCTGGGGCAGCAAGCAGAGAGCCCTGGGTACAGCTGTTCCGGGCTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | CAGCCAGGCAACAGCGCAGAGGGTCTGAGCTGCCCTTaGTGGTTAGGGCCTGGACAGACACATGGAGAGGCC | + |
|
Preference number: 6 (lower is better) Translates to: QPGNSAEGLSCP*WLGPGQTHGEA Trigger: GGCCTCTCCATGTGTCTGTCCAGGCCCTAACCAGCAAGGGCAGCTCAGACCCTCTGCGCTGTTGCCTGGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | TCCAGTGCTGCCAGGCAGGCAGTGCCCATGGCTCCATaGCTCCAAGGTCTCCAAGCCGTGGGAGGGTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: SSAARQAVPMAP*LQGLQAVGGLS Trigger: TGACAACCCTCCCACGGCTTGGAGACCTTGGAGCCATGGAGCCATGGGCACTGCCTGCCTGGCAGCACTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | GTAAGGCACAGCCAGAGGCTCGCCAAGTCCCTCTGGTaGGGGGCTCAGACTGAGTTCATCTCCTGCGGCCTC | + |
|
Preference number: 6 (lower is better) Translates to: VRHSQRLAKSLW*GAQTEFISCGL Trigger: GAGGCCGCAGGAGATGAACTCAGTCTGAGCCCCCCACCAGAGGGACTTGGCGAGCCTCTGGCTGTGCCTTAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | CCAGGCAACAGCGCAGAGGGTCTGAGCTGCCCTTGCTaGTTAGGGCCTGGACAGACACATGGAGAGGCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: PGNSAEGLSCPC*LGPGQTHGEAQ Trigger: CTGGGCCTCTCCATGTGTCTGTCCAGGCCCTAACCAGCAAGGGCAGCTCAGACCCTCTGCGCTGTTGCCTGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | CTATCACAGCCCGGCCCTAGCAACGCAAGTTCAGGCTaGCTAGGGTCTTGGGAAGTGCGGCTGGGCCCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: LSQPGPSNASSG*LGSWEVRLGPG Trigger: ACCAGGGCCCAGCCGCACTTCCCAAGACCCTAGCCAGCCTGAACTTGCGTTGCTAGGGCCGGGCTGTGATAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | ACTCCCCAGTTTCTGTTGCCCGGGAGGGTGGCTCCTTaGTTCTGCCAATCGCACTGCGGCCTCTCCGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: TPQFLLPGRVAP*FCQSHCGLSAL Trigger: CAGAGCGGAGAGGCCGCAGTGCGATTGGCAGAACCAAGGAGCCACCCTCCCGGGCAACAGAAACTGGGGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | CCCTCTGGACTCCCCAGTTTCTGTTGCCCGGGAGGGTaGCTCCTTGGTTCTGCCAATCGCACTGCGGCCTCT | + |
|
Preference number: 6 (lower is better) Translates to: PSGLPSFCCPGG*LLGSANRTAAS Trigger: AGAGGCCGCAGTGCGATTGGCAGAACCAAGGAGCCACCCTCCCGGGCAACAGAAACTGGGGAGTCCAGAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CAA 72 bp | GACTCCCCAGTTTCTGTTGCCCGGGAGGGTGGCTCCTaGGTTCTGCCAATCGCACTGCGGCCTCTCCGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: DSPVSVAREGGS*VLPIALRPLRS Trigger: AGAGCGGAGAGGCCGCAGTGCGATTGGCAGAACCAAGGAGCCACCCTCCCGGGCAACAGAAACTGGGGAGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CAA 90 bp | CTCCTCCTCCTCCAGCCCGGAACAGCTGTACCCAGGGCTCTCTGCTaGCTGCCCCAGCTTAGGCAGCCCGGTCTCTGTTGCTTCAGGATC | + |
|
Preference number: 6 (lower is better) Translates to: LLLLQPGTAVPRALC*LPQLRQPGLCCFRI Trigger: GATCCTGAAGCAACAGAGACCGGGCTGCCTAAGCTGGGGCAGCAAGCAGAGAGCCCTGGGTACAGCTGTTCCGGGCTGGAGGAGGAGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CAA 90 bp | GAAGCCGGCTGCAATGTTCTCGGGGGTCCTGAGGTCGCTTGCGGTTaGGGAGTTTCTCCGGGGAGCCACCTCCTCTCCTCCTGCCGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: EAGCNVLGGPEVACG*GVSPGSHLLSSCRF Trigger: GAAACGGCAGGAGGAGAGGAGGTGGCTCCCCGGAGAAACTCCCAAACCGCAAGCGACCTCAGGACCCCCGAGAACATTGCAGCCGGCTTC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS TCA 72 bp | GCAGACGGAAGGCCTGGAGCTCCTGAGCCAGAAGGCTaGAACGCTCAGTCTGGCTTCGGCACTGGCCCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: ADGRPGAPEPEG*NAQSGFGTGPQ Trigger: TTGAGGGCCAGTGCCGAAGCCAGACTGAGCGTTTCAGCCTTCTGGCTCAGGAGCTCCAGGCCTTCCGTCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS TCA 72 bp | CACTACTGCAACCACCCCCGCCTCCACTCAGGAAACTaGGCTCGGGGCCTGAGCTGTGCGACGAATCAGCCA | + |
|
Preference number: 6 (lower is better) Translates to: HYCNHPRLHSGN*ARGLSCATNQP Trigger: TGGCTGATTCGTCGCACAGCTCAGGCCCCGAGCTCAGTTTCCTGAGTGGAGGCGGGGGTGGTTGCAGTAGTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | CTGCTGGACTGTCCACAGCCACCTCAGCCACCATGTTaGAGGGGATGTAGCCTGTACGGCCCCCACTCTCAC | + |
|
Preference number: 6 (lower is better) Translates to: LLDCPQPPQPPC*RGCSLYGPHSH Trigger: GTGAGAGTGGGGGCCGTACAGGCTACATCCCCTGCAACATGGTGGCTGAGGTGGCTGTGGACAGTCCAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS CCA 72 bp | TGCTATTCCCCGGCACCCAGGCGATCTCAGCAGATGTaGCTGTCAGCCGATGGATCCGCAGCTGGCTGGGTA | + |
|
Preference number: 6 (lower is better) Translates to: CYSPAPRRSQQM*LSADGSAAGWV Trigger: TACCCAGCCAGCTGCGGATCCATCGGCTGACAGCCACATCTGCTGAGATCGCCTGGGTGCCGGGGAATAGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | GCAACGGGGGCCGGGATGGAGTCACTGGACTCGCCATaGGGTGACATAGTGCGTACAGTCACCTCATGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: ATGAGMESLDSP*GDIVRTVTSWQ Trigger: CTGCCATGAGGTGACTGTACGCACTATGTCACCCCATGGCGAGTCCAGTGACTCCATCCCGGCCCCCGTTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | GCAATGTTCTCGGGGGTCCTGAGGTCGCTTGCGGTTTaGGAGTTTCTCCGGGGAGCCACCTCCTCTCCTCCT | + |
|
Preference number: 6 (lower is better) Translates to: AMFSGVLRSLAV*EFLRGATSSPP Trigger: AGGAGGAGAGGAGGTGGCTCCCCGGAGAAACTCCCAAACCGCAAGCGACCTCAGGACCCCCGAGAACATTGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | AGCCACAAAGACCCTCACAGGCAGGTCCTGATGAGGTaGTGCTTCTTGGGGGCTCCTTGGAGGGGCCAGCTC | + |
|
Preference number: 6 (lower is better) Translates to: SHKDPHRQVLMR*CFLGAPWRGQL Trigger: GAGCTGGCCCCTCCAAGGAGCCCCCAAGAAGCACCACCTCATCAGGACCTGCCTGTGAGGGTCTTTGTGGCT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 ENSMUST00000144502.8 |
||
| CDS CCA 72 bp | GACCTTCCAGCTCCACTTTCTTGGACCGACGAGGCTTaGGGGGAGGCCCGGGTGTGTGTGCTGAGGAGTACA | + |
|
Preference number: 6 (lower is better) Translates to: DLPAPLSWTDEA*GEARVCVLRST Trigger: TGTACTCCTCAGCACACACACCCGGGCCTCCCCCCAAGCCTCGTCGGTCCAAGAAAGTGGAGCTGGAAGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000133645.2 ENSMUST00000142329.8 |
||
| CDS CAA 72 bp | TGCAATGTTCTCGGGGGTCCTGAGGTCGCTTGCGGTTaGGGAGTTTCTCCGGGGAGCCACCTCCTCTCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: CNVLGGPEVACG*GVSPGSHLLSS Trigger: GGAGGAGAGGAGGTGGCTCCCCGGAGAAACTCCCAAACCGCAAGCGACCTCAGGACCCCCGAGAACATTGCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CAA 90 bp | GCCACCTCCCGCATATGCTTCAGCACCTGCTCCAGGCTCTCCAGCTaGCTTTGCAGGCCCTGGCTCTTAAGAAGGGCCGAGTCCCTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: ATSRICFSTCSRLSS*LCRPWLLRRAESLS Trigger: AGAGAGGGACTCGGCCCTTCTTAAGAGCCAGGGCCTGCAAAGCAAGCTGGAGAGCCTGGAGCAGGTGCTGAAGCATATGCGGGAGGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CAA 90 bp | AGCCACAAAGACCCTCACAGGCAGGTCCTGATGAGGTGGTGCTTCTaGGGGGCTCCTTGGAGGGGCCAGCTCAGTGGTACCAGACCTAGG | + |
|
Preference number: 6 (lower is better) Translates to: SHKDPHRQVLMRWCF*GAPWRGQLSGTRPR Trigger: CCTAGGTCTGGTACCACTGAGCTGGCCCCTCCAAGGAGCCCCCAAGAAGCACCACCTCATCAGGACCTGCCTGTGAGGGTCTTTGTGGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 ENSMUST00000144502.8 |
||
| CDS TCA 72 bp | TTGCCAAGAAGCCGGCTGCAATGTTCTCGGGGGTCCTaGGGTCGCTTGCGGTTTGGGAGTTTCTCCGGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: LPRSRLQCSRGS*GRLRFGSFSGE Trigger: CTCCCCGGAGAAACTCCCAAACCGCAAGCGACCTCAGGACCCCCGAGAACATTGCAGCCGGCTTCTTGGCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | ACAGGGCCAGCATCTCCTGAAGTGCACTCCACTTCCTaGTTAGCCAGGGAAGGAGCCACAGGCTCAGGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: TGPASPEVHSTS*LAREGATGSGP Trigger: AGGCCCTGAGCCTGTGGCTCCTTCCCTGGCTAAGCAGGAAGTGGAGTGCACTTCAGGAGATGCTGGCCCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000144502.8 |
||
| CDS GCA 72 bp | TTGGGAGTTTCTCCGGGGAGCCACCTCCTCTCCTCCTaGCGTTTCCACCAACGACTCCCAGCACATCCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LGVSPGSHLLSS*RFHQRLPAHPP Trigger: TGGAGGATGTGCTGGGAGTCGTTGGTGGAAACGGCAGGAGGAGAGGAGGTGGCTCCCCGGAGAAACTCCCAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | CTCTCAGGAGGCAACTCCCAGGCCAGCACCACACTGTaGGCTAACTGCTTGAGAACCGTGATGTGTCGGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LSGGNSQASTTL*ANCLRTVMCRG Trigger: CCCCCGACACATCACGGTTCTCAAGCAGTTAGCCCACAGTGTGGTGCTGGCCTGGGAGTTGCCTCCTGAGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | TCGCCATGGGGTGACATAGTGCGTACAGTCACCTCATaGCAGGCCTGCAACAGCTGCAGCTGGGACACCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SPWGDIVRTVTS*QACNSCSWDTS Trigger: GGAGGTGTCCCAGCTGCAGCTGTTGCAGGCCTGCCATGAGGTGACTGTACGCACTATGTCACCCCATGGCGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS TCA 72 bp | GTTTGTCCTTGGCCAACAGTGCACTGGCTGTCTCACTaGGGTCTCGGGCTCGCTGGCGAGCTAGAGCCTTAC | + |
|
Preference number: 6 (lower is better) Translates to: VCPWPTVHWLSH*GLGLAGELEPY Trigger: GTAAGGCTCTAGCTCGCCAGCGAGCCCGAGACCTCAGTGAGACAGCCAGTGCACTGTTGGCCAAGGACAAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS TCA 72 bp | CGGGCCTGCATGGAATCCAAGGTAGACTCCAGCAGCTaGACGGCTCCCTCATGTTCCCTCTTGGCTTCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RACMESKVDSSS*TAPSCSLLASA Trigger: GGCAGAAGCCAAGAGGGAACATGAGGGAGCCGTTCAGCTGCTGGAGTCTACCTTGGATTCCATGCAGGCCCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS TCA 72 bp | CCTCCTCTTCCTCCTCCTCTTCCTCCTCAGGGATGCTaGACAGCTTCTTGCTGCAGAGCCGCTGGAGAGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PPLPPPLPPQGC*TASCCRAAGEA Trigger: TGCCTCTCCAGCGGCTCTGCAGCAAGAAGCTGTTCAGCATCCCTGAGGAGGAAGAGGAGGAGGAAGAGGAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | GAGTACCAGCAATGCTTGGAGATGCATCTCCAGGTTTaGACCCCTGGCCCTGAGTCCAGTGCTGCCAGGCAG | + |
|
Preference number: 6 (lower is better) Translates to: EYQQCLEMHLQV*TPGPESSAARQ Trigger: CTGCCTGGCAGCACTGGACTCAGGGCCAGGGGTGCAAACCTGGAGATGCATCTCCAAGCATTGCTGGTACTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | AGTGCACTGGCTGTCTCACTGAGGTCTCGGGCTCGCTaGCGAGCTAGAGCCTTACGGCACAACTCCAAACTG | + |
|
Preference number: 6 (lower is better) Translates to: SALAVSLRSRAR*RARALRHNSKL Trigger: CAGTTTGGAGTTGTGCCGTAAGGCTCTAGCTCGCCAGCGAGCCCGAGACCTCAGTGAGACAGCCAGTGCACT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS CCA 72 bp | ACCTGCTCCAGGCTCTCCAGCTTGCTTTGCAGGCCCTaGCTCTTAAGAAGGGCCGAGTCCCTCTCTTGTGTC | + |
|
Preference number: 6 (lower is better) Translates to: TCSRLSSLLCRP*LLRRAESLSCV Trigger: GACACAAGAGAGGGACTCGGCCCTTCTTAAGAGCCAGGGCCTGCAAAGCAAGCTGGAGAGCCTGGAGCAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | GATTCTGGCTCCTCCCGAGTGACTCTCCGGAGCTGCTaGGAGCAGGGAAACACTGTCTACCTCCAGTTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: DSGSSRVTLRSC*EQGNTVYLQFL Trigger: GAGGAACTGGAGGTAGACAGTGTTTCCCTGCTCCCAGCAGCTCCGGAGAGTCACTCGGGAGGAGCCAGAATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | TTAGCCAGGGAAGGAGCCACAGGCTCAGGGCCTTCCTaGCCCAGAGTTGGCTCGATAGCCCTCTTCTCTTCT | + |
|
Preference number: 6 (lower is better) Translates to: LAREGATGSGPS*PRVGSIALFSS Trigger: AGAAGAGAAGAGGGCTATCGAGCCAACTCTGGGCCAGGAAGGCCCTGAGCCTGTGGCTCCTTCCCTGGCTAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000144502.8 |
||
| CDS CCA 72 bp | CAAGAAACCCCGCTGGAGCAGCTGTTGTCTCCCTGCTaGACTGTCCACAGCCACCTCAGCCACCATGTTGCA | + |
|
Preference number: 6 (lower is better) Translates to: QETPLEQLLSPC*TVHSHLSHHVA Trigger: TGCAACATGGTGGCTGAGGTGGCTGTGGACAGTCCAGCAGGGAGACAACAGCTGCTCCAGCGGGGTTTCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS CAA 72 bp | TCTGGCTGGGGCTTGGCTCCATTCTCCCTGATGCTGTaGCCAGCAACCTGCTTCTGGGAGGAACAAGGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: SGWGLAPFSLML*PATCFWEEQGL Trigger: CAGGCCTTGTTCCTCCCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAATGGAGCCAAGCCCCAGCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CAA 90 bp | CTTGCTTTGCAGGCCCTGGCTCTTAAGAAGGGCCGAGTCCCTCTCTaGTGTCACCCCCAGGAGCTGTCCCTTCAGCTCCGAATTCTCCCA | + |
|
Preference number: 6 (lower is better) Translates to: LALQALALKKGRVPL*CHPQELSLQLRILP Trigger: TGGGAGAATTCGGAGCTGAAGGGACAGCTCCTGGGGGTGACACAAGAGAGGGACTCGGCCCTTCTTAAGAGCCAGGGCCTGCAAAGCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CAA 90 bp | GGGAGGGTGGACAGAAGATCATCATCAGACACGCGCTCTACAAAGTaGGAAGGGACCAGGCCCCTTCGGCCATCCATGAGCTCCCCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: GRVDRRSSSDTRSTK*EGTRPLRPSMSSPS Trigger: TGAAGGGGAGCTCATGGATGGCCGAAGGGGCCTGGTCCCTTCCAACTTTGTAGAGCGCGTGTCTGATGATGATCTTCTGTCCACCCTCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS TCA 72 bp | TCCTTGGGTGGAGCAAGGTACAGGGCCAGCATCTCCTaGAGTGCACTCCACTTCCTGCTTAGCCAGGGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLGGARYRASIS*SALHFLLSQGR Trigger: CCTTCCCTGGCTAAGCAGGAAGTGGAGTGCACTTCAGGAGATGCTGGCCCTGTACCTTGCTCCACCCAAGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000144502.8 |
||
| CDS GCA 72 bp | CTGCAGAGCTGTCGGAGTACCAGCAATGCTTGGAGATaGATCTCCAGGTTTGCACCCCTGGCCCTGAGTCCA | + |
|
Preference number: 6 (lower is better) Translates to: LQSCRSTSNAWR*ISRFAPLALSP Trigger: TGGACTCAGGGCCAGGGGTGCAAACCTGGAGATGCATCTCCAAGCATTGCTGGTACTCCGACAGCTCTGCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | CCCGAAGCCTATGTTGAACTTGGCCTTATAAGCCTGTaGCTCCTCCTCCTCCAGCCCGGAACAGCTGTACCC | + |
|
Preference number: 6 (lower is better) Translates to: PEAYVELGLISL*LLLLQPGTAVP Trigger: GGGTACAGCTGTTCCGGGCTGGAGGAGGAGGAGGCACAGGCTTATAAGGCCAAGTTCAACATAGGCTTCGGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | CTGCAAGGCAGCAATCTGTTTGTCCTTGGCCAACAGTaGACTGGCTGTCTCACTGAGGTCTCGGGCTCGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LQGSNLFVLGQQ*TGCLTEVSGSL Trigger: CAGCGAGCCCGAGACCTCAGTGAGACAGCCAGTGCACTGTTGGCCAAGGACAAACAGATTGCTGCCTTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000039627.12 |
||
| CDS GCA 72 bp | AGCTGTCCCTTCAGCTCCGAATTCTCCCATTCCACCTaGTCCTTCTCTGTGGCTCTCCCACTGAGCCGAGAG | + |
|
Preference number: 6 (lower is better) Translates to: SCPFSSEFSHST*SFSVALPLSRE Trigger: CTCTCGGCTCAGTGGGAGAGCCACAGAGAAGGAGCAGGTGGAATGGGAGAATTCGGAGCTGAAGGGACAGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | CGAGAGTTCTCCTCCACCAGGCGGGCATTTTCATTCTaGGCTGCCCTCAGCTGTAGCTCCAGCTCCTCACAT | + |
|
Preference number: 6 (lower is better) Translates to: REFSSTRRAFSF*AALSCSSSSSH Trigger: ATGTGAGGAGCTGGAGCTACAGCTGAGGGCAGCCCAGAATGAAAATGCCCGCCTGGTGGAGGAGAACTCTCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | CACAGCTGCCCCAGCCTCTTCCTGAGAGCAAGGGACTaGAGGTTCCTCCTGGGGTCCTTTGGACATCTCTAT | + |
|
Preference number: 6 (lower is better) Translates to: HSCPSLFLRARD*RFLLGSFGHLY Trigger: ATAGAGATGTCCAAAGGACCCCAGGAGGAACCTCCAGTCCCTTGCTCTCAGGAAGAGGCTGGGGCAGCTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000144502.8 |
||
| CDS CAA 90 bp | CTCATGTTCGTTTCCTGCAGCTTCTGTGCCCTCTCCTCCAGGCGCTaGGCAATGACTGCCAGTTCAGCATTCTTCCGCTTCAGCCTCCGT | + |
|
Preference number: 6 (lower is better) Translates to: LMFVSCSFCALSSRR*AMTASSAFFRFSLR Trigger: ACGGAGGCTGAAGCGGAAGAATGCTGAACTGGCAGTCATTGCCAAGCGCCTGGAGGAGAGGGCACAGAAGCTGCAGGAAACGAACATGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS TCA 72 bp | AGGAGTACACAGAGGGACCATTTCCTGAGGCCTCGGTaGGAACATTTGGGGGCAAGAAACCCCGCTGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: RSTQRDHFLRPR*EHLGARNPAGA Trigger: TGCTCCAGCGGGGTTTCTTGCCCCCAAATGTTCTCACCGAGGCCTCAGGAAATGGTCCCTCTGTGTACTCCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000133645.2 ENSMUST00000142329.8 |
||
| CDS GCA 72 bp | TTGGCTCCATTCTCCCTGATGCTGTTGCCAGCAACCTaGTTCTGGGAGGAACAAGGCCTGGAACCCAGTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LAPFSLMLLPAT*FWEEQGLEPSS Trigger: GGAACTGGGTTCCAGGCCTTGTTCCTCCCAGAAGCAGGTTGCTGGCAACAGCATCAGGGAGAATGGAGCCAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 ENSMUST00000144502.8 |
||
| CDS CCA 72 bp | AGCCTGTACATCCAGTGGGGCATCAGGCAGACCTGCTaGAAGTGTGGTGAACTGCAAGGTAGCAGCTCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLYIQWGIRQTC*KCGELQGSSSL Trigger: CAGAGAGCTGCTACCTTGCAGTTCACCACACTTCCAGCAGGTCTGCCTGATGCCCCACTGGATGTACAGGCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | TCTCCCCCATGGCAGGCTTCAATACTTGGCTTCTTCTaGGTCAGCTCTCCTTGGGTGGAGCAAGGTACAGGG | + |
|
Preference number: 6 (lower is better) Translates to: SPPWQASILGFF*VSSPWVEQGTG Trigger: CCCTGTACCTTGCTCCACCCAAGGAGAGCTGACCCAGAAGAAGCCAAGTATTGAAGCCTGCCATGGGGGAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 ENSMUST00000144502.8 |
||
| CDS CCA 72 bp | GGAGTCCAGATCTCCCCCATGGCAGGCTTCAATACTTaGCTTCTTCTGGGTCAGCTCTCCTTGGGTGGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: GVQISPMAGFNT*LLLGQLSLGGA Trigger: TGCTCCACCCAAGGAGAGCTGACCCAGAAGAAGCCAAGTATTGAAGCCTGCCATGGGGGAGATCTGGACTCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 ENSMUST00000144502.8 |
||
| CDS GCA 72 bp | ATCTGGTTTTCCTCCTTCAGGATGGTACAGCGCTGCTaGAGCTCTCCCAGGGCCCTTAGCAGCTCCAGATTA | + |
|
Preference number: 6 (lower is better) Translates to: IWFSSFRMVQRC*SSPRALSSSRL Trigger: TAATCTGGAGCTGCTAAGGGCCCTGGGAGAGCTGCAGCAGCGCTGTACCATCCTGAAGGAGGAAAACCAGAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | TTGCTGCAGAGCCGCTGGAGAGGCAACTCCAGTATCTaGTCCAAGATCTCCTCGTCGCTGTCAGTCTCACAA | + |
|
Preference number: 6 (lower is better) Translates to: LLQSRWRGNSSI*SKISSSLSVSQ Trigger: TTGTGAGACTGACAGCGACGAGGAGATCTTGGAGCAGATACTGGAGTTGCCTCTCCAGCGGCTCTGCAGCAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | TTTAACCTGCAGAGCTGTCGGAGTACCAGCAATGCTTaGAGATGCATCTCCAGGTTTGCACCCCTGGCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FNLQSCRSTSNA*RCISRFAPLAL Trigger: CAGGGCCAGGGGTGCAAACCTGGAGATGCATCTCCAAGCATTGCTGGTACTCCGACAGCTCTGCAGGTTAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | CACTGGCTGTGTCCACCTCTGGTGTGGGACATGACTTaGGGCTGTTGTGGATGGACTCTGAGCGAGAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: HWLCPPLVWDMT*GCCGWTLSEKN Trigger: ATTCTTCTCGCTCAGAGTCCATCCACAACAGCCCCAAGTCATGTCCCACACCAGAGGTGGACACAGCCAGTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | CAATACTTGGCTTCTTCTGGGTCAGCTCTCCTTGGGTaGAGCAAGGTACAGGGCCAGCATCTCCTGAAGTGC | + |
|
Preference number: 6 (lower is better) Translates to: QYLASSGSALLG*SKVQGQHLLKC Trigger: GCACTTCAGGAGATGCTGGCCCTGTACCTTGCTCCACCCAAGGAGAGCTGACCCAGAAGAAGCCAAGTATTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 ENSMUST00000144502.8 |
||
| CDS CCA 72 bp | TCAGGGATGCTGAACAGCTTCTTGCTGCAGAGCCGCTaGAGAGGCAACTCCAGTATCTGCTCCAAGATCTCC | + |
|
Preference number: 6 (lower is better) Translates to: SGMLNSFLLQSR*RGNSSICSKIS Trigger: GGAGATCTTGGAGCAGATACTGGAGTTGCCTCTCCAGCGGCTCTGCAGCAAGAAGCTGTTCAGCATCCCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CCA 72 bp | CCATCAGCGTCCTTGTCTCCAAACACCTTGAGGAGTTaGCCCTCCTTAAAGGGCAGTTCCTCTTCTCCGGCA | + |
|
Preference number: 6 (lower is better) Translates to: PSASLSPNTLRS*PSLKGSSSSPA Trigger: TGCCGGAGAAGAGGAACTGCCCTTTAAGGAGGGCCAACTCCTCAAGGTGTTTGGAGACAAGGACGCTGATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS CCA 72 bp | CTGGAGGTTCCTCCTGGGGTCCTTTGGACATCTCTATaGAAAGACTCTGGGCTTGGTCGTGGTGAGAGACAG | + |
|
Preference number: 6 (lower is better) Translates to: LEVPPGVLWTSL*KDSGLGRGERQ Trigger: CTGTCTCTCACCACGACCAAGCCCAGAGTCTTTCCATAGAGATGTCCAAAGGACCCCAGGAGGAACCTCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144502.8 |
||
| CDS CCA 72 bp | GAGAGCAAGGGACTGGAGGTTCCTCCTGGGGTCCTTTaGACATCTCTATGGAAAGACTCTGGGCTTGGTCGT | + |
|
Preference number: 6 (lower is better) Translates to: ESKGLEVPPGVL*TSLWKDSGLGR Trigger: ACGACCAAGCCCAGAGTCTTTCCATAGAGATGTCCAAAGGACCCCAGGAGGAACCTCCAGTCCCTTGCTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000144502.8 |
||
| CDS CAA 72 bp | TCACTGGCTGTGTCCACCTCTGGTGTGGGACATGACTaGGGGCTGTTGTGGATGGACTCTGAGCGAGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: SLAVSTSGVGHD*GLLWMDSEREE Trigger: TTCTTCTCGCTCAGAGTCCATCCACAACAGCCCCAAGTCATGTCCCACACCAGAGGTGGACACAGCCAGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CAA 72 bp | GACAGAAGATCATCATCAGACACGCGCTCTACAAAGTaGGAAGGGACCAGGCCCCTTCGGCCATCCATGAGC | + |
|
Preference number: 6 (lower is better) Translates to: DRRSSSDTRSTK*EGTRPLRPSMS Trigger: GCTCATGGATGGCCGAAGGGGCCTGGTCCCTTCCAACTTTGTAGAGCGCGTGTCTGATGATGATCTTCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CAA 72 bp | ACCATCAGCGTCCTTGTCTCCAAACACCTTGAGGAGTaGGCCCTCCTTAAAGGGCAGTTCCTCTTCTCCGGC | + |
|
Preference number: 6 (lower is better) Translates to: TISVLVSKHLEE*ALLKGQFLFSG Trigger: GCCGGAGAAGAGGAACTGCCCTTTAAGGAGGGCCAACTCCTCAAGGTGTTTGGAGACAAGGACGCTGATGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS CAA 90 bp | TCACTGGCTGTGTCCACCTCTGGTGTGGGACATGACTTGGGGCTGTaGTGGATGGACTCTGAGCGAGAAGAATTAGAAAGAGACTCGGCC | + |
|
Preference number: 6 (lower is better) Translates to: SLAVSTSGVGHDLGL*WMDSEREELERDSA Trigger: GGCCGAGTCTCTTTCTAATTCTTCTCGCTCAGAGTCCATCCACAACAGCCCCAAGTCATGTCCCACACCAGAGGTGGACACAGCCAGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CAA 90 bp | CCGGTAGAAACCATCAGCGTCCTTGTCTCCAAACACCTTGAGGAGTaGGCCCTCCTTAAAGGGCAGTTCCTCTTCTCCGGCATCAGGGTT | + |
|
Preference number: 6 (lower is better) Translates to: PVETISVLVSKHLEE*ALLKGQFLFSGIRV Trigger: AACCCTGATGCCGGAGAAGAGGAACTGCCCTTTAAGGAGGGCCAACTCCTCAAGGTGTTTGGAGACAAGGACGCTGATGGTTTCTACCGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS TCA 72 bp | GCCACCATAGGTCGGGAGGTTTTCTGGGCAGCAGAATaGATCAGCTTAGGAGGACCTGGACAGAGCTGTGTA | + |
|
Preference number: 6 (lower is better) Translates to: ATIGREVFWAAE*ISLGGPGQSCV Trigger: TACACAGCTCTGTCCAGGTCCTCCTAAGCTGATTCATTCTGCTGCCCAGAAAACCTCCCGACCTATGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS TCA 72 bp | GCCACCATAGGTCGGGAGGTTTTCTGGGCAGCAGAATaGATCAGCTTAGGAGGACCTCTTCCCAGACACTTG | + |
|
Preference number: 6 (lower is better) Translates to: ATIGREVFWAAE*ISLGGPLPRHL Trigger: CAAGTGTCTGGGAAGAGGTCCTCCTAAGCTGATTCATTCTGCTGCCCAGAAAACCTCCCGACCTATGGTGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000133645.2 |
||
| CDS CCA 72 bp | GCTTCAATACTTGGCTTCTTCTGGGTCAGCTCTCCTTaGGTGGAGCAAGGTACAGGGCCAGCATCTCCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: ASILGFFWVSSP*VEQGTGPASPE Trigger: TTCAGGAGATGCTGGCCCTGTACCTTGCTCCACCCAAGGAGAGCTGACCCAGAAGAAGCCAAGTATTGAAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 ENSMUST00000144502.8 |
||
| CDS GCA 72 bp | TTCTTTCGCTTCTTGCAGAGCTCAGACTCCAGCTGCTaGACCCTTTGCTGCTTCTCTGGTTCCCTTAGGACT | + |
|
Preference number: 6 (lower is better) Translates to: FFRFLQSSDSSC*TLCCFSGSLRT Trigger: AGTCCTAAGGGAACCAGAGAAGCAGCAAAGGGTGCAGCAGCTGGAGTCTGAGCTCTGCAAGAAGCGAAAGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | ATGGGATCTGAGCCTCCACTCGGGCCTGATAGAGTGTaGCAGGTCTCAGGTTACAAAAGGTTGCCCAATATG | + |
|
Preference number: 6 (lower is better) Translates to: MGSEPPLGPDRV*QVSGYKRLPNM Trigger: CATATTGGGCAACCTTTTGTAACCTGAGACCTGGCACACTCTATCAGGCCCGAGTGGAGGCTCAGATCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | CATATTGGGGGAGTTCTCCCGAGGATTATAGTCAAATaGAGCCACCATAGGTCGGGAGGTTTTCTGGGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: HIGGVLPRIIVK*SHHRSGGFLGS Trigger: GCTGCCCAGAAAACCTCCCGACCTATGGTGGCTGCATTTGACTATAATCCTCGGGAGAACTCCCCCAATATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000133645.2 ENSMUST00000142329.8 |
||
| CDS CCA 72 bp | TTTCTGGGCAGCAGAATGAATCAGCTTAGGAGGACCTaGACAGAGCTGTGTAGGACCTTCCAGCTCCACTTT | + |
|
Preference number: 6 (lower is better) Translates to: FLGSRMNQLRRT*TELCRTFQLHF Trigger: AAAGTGGAGCTGGAAGGTCCTACACAGCTCTGTCCAGGTCCTCCTAAGCTGATTCATTCTGCTGCCCAGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 |
||
| CDS GCA 72 bp | CTCCTGGGGTCCTTTGGACATCTCTATGGAAAGACTTaGAGAGAAATCTTGAGTTCCATGGGGGACAGGATG | + |
|
Preference number: 6 (lower is better) Translates to: LLGSFGHLYGKT*REILSSMGDRM Trigger: CATCCTGTCCCCCATGGAACTCAAGATTTCTCTGCAAGTCTTTCCATAGAGATGTCCAAAGGACCCCAGGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS CAA 72 bp | CCTCCTGGGGTCCTTTGGACATCTCTATGGAAAGACTaGCAGAGAAATCTTGAGTTCCATGGGGGACAGGAT | + |
|
Preference number: 6 (lower is better) Translates to: PPGVLWTSLWKD*QRNLEFHGGQD Trigger: ATCCTGTCCCCCATGGAACTCAAGATTTCTCTGCAAGTCTTTCCATAGAGATGTCCAAAGGACCCCAGGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | GGCTTGGAACTCTCTTCAAACCTCAATCCTTTAACCTaGAGAGCTGTCGGAGTACCAGCAATGCTTGGAGAT | + |
|
Preference number: 6 (lower is better) Translates to: GLELSSNLNPLT*RAVGVPAMLGD Trigger: ATCTCCAAGCATTGCTGGTACTCCGACAGCTCTGCAGGTTAAAGGATTGAGGTTTGAAGAGAGTTCCAAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 |
||
| CDS GCA 72 bp | CTTCCTCTTCTTCCTGGATGTCTGATAAGTCTGAGTTaGGGCTGTGATCCACAAGGGAATTCACCAGGTGAA | + |
|
Preference number: 6 (lower is better) Translates to: LPLLPGCLISLS*GCDPQGNSPGE Trigger: TTCACCTGGTGAATTCCCTTGTGGATCACAGCCGCAACTCAGACTTATCAGACATCCAGGAAGAAGAGGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 ENSMUST00000144502.8 |
||
| CDS TCA 72 bp | ATCCACAAGGGAATTCACCAGGTGAACTCCAAGCTCTaGCATATCTTCTTTCTCAGATCTAAGTTTCAGCCC | + |
|
Preference number: 6 (lower is better) Translates to: IHKGIHQVNSKL*HIFFLRSKFQP Trigger: GGGCTGAAACTTAGATCTGAGAAAGAAGATATGTCAGAGCTTGGAGTTCACCTGGTGAATTCCCTTGTGGAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000039627.12 ENSMUST00000100644.10 ENSMUST00000142329.8 ENSMUST00000144502.8 |
||