Pregenerated sensors for TSPAN9 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030352Ensembl transcript IDs: ENSMUST00000032503.12, ENSMUST00000112171.8, ENSMUST00000112173.8, ENSMUST00000123786.9, ENSMUST00000154375.8, ENSMUST00000202372.4
Found 218 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGGGTGCTCCAGGGGGCCTGACCTGGCGGTGCCACACTGCACCCTaGCAGGCTCTCTGGCTGGGCAGCCATGGACGGCAGTGGCCTCCA | + |
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Preference number: 1 (lower is better) Translates to: QGAPGGLTWRCHTAP*QALWLGSHGRQWPP Trigger: TGGAGGCCACTGCCGTCCATGGCTGCCCAGCCAGAGAGCCTGCCAGGGTGCAGTGTGGCACCGCCAGGTCAGGCCCCCTGGAGCACCCTG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR TCA 90 bp | GACCTGCACCAGACACCTGTCCAGACCCTACCCTCTGAGCCCCACTaGGGCAGCTGGCTGTGGAGAAATGCCAGAGGCTGCGCCAGGCAT | + |
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Preference number: 1 (lower is better) Translates to: DLHQTPVQTLPSEPH*GSWLWRNARGCARH Trigger: ATGCCTGGCGCAGCCTCTGGCATTTCTCCACAGCCAGCTGCCTCAGTGGGGCTCAGAGGGTAGGGTCTGGACAGGTGTCTGGTGCAGGTC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR CCA 90 bp | GTTGAAGGGGCTTCCTCGCTGACACCCTGCCCGCCCCGGCATCTTTaGCAAGTCTGCAGGTGCAGGAATCCAGTTGCCCAAGCCCTGAGG | + |
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Preference number: 1 (lower is better) Translates to: VEGASSLTPCPPRHL*QVCRCRNPVAQALR Trigger: CCTCAGGGCTTGGGCAACTGGATTCCTGCACCTGCAGACTTGCCAAAGATGCCGGGGCGGGCAGGGTGTCAGCGAGGAAGCCCCTTCAAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR CCA 90 bp | GCGTGCACTCCTGGCTCTCTGGCCACCAAGGGACAGCAAGGCAAGTaGAGGCCCAAAGGCCTCTCCCCTCAGAATGCCCACTCAGGAAGG | + |
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Preference number: 1 (lower is better) Translates to: ACTPGSLATKGQQGK*RPKGLSPQNAHSGR Trigger: CCTTCCTGAGTGGGCATTCTGAGGGGAGAGGCCTTTGGGCCTCCACTTGCCTTGCTGTCCCTTGGTGGCCAGAGAGCCAGGAGTGCACGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR GCA 90 bp | TCGCTGACACCCTGCCCGCCCCGGCATCTTTGGCAAGTCTGCAGGTaGAGGAATCCAGTTGCCCAAGCCCTGAGGTCTCTGCATGATGCC | + |
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Preference number: 1 (lower is better) Translates to: SLTPCPPRHLWQVCR*RNPVAQALRSLHDA Trigger: GGCATCATGCAGAGACCTCAGGGCTTGGGCAACTGGATTCCTGCACCTGCAGACTTGCCAAAGATGCCGGGGCGGGCAGGGTGTCAGCGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR GCA 90 bp | GCTTCCTCGCTGACACCCTGCCCGCCCCGGCATCTTTGGCAAGTCTaGAGGTGCAGGAATCCAGTTGCCCAAGCCCTGAGGTCTCTGCAT | + |
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Preference number: 1 (lower is better) Translates to: ASSLTPCPPRHLWQV*RCRNPVAQALRSLH Trigger: ATGCAGAGACCTCAGGGCTTGGGCAACTGGATTCCTGCACCTGCAGACTTGCCAAAGATGCCGGGGCGGGCAGGGTGTCAGCGAGGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR CCA 90 bp | GTATGCCACCAGCCTCTTCTGGCCTTCATCCATGGTCTCCAGGCCTaGCAGGGCCCCGTATCATGGCCTCACCCTCTCCCTCAAGGTGAG | + |
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Preference number: 1 (lower is better) Translates to: VCHQPLLAFIHGLQA*QGPVSWPHPLPQGE Trigger: CTCACCTTGAGGGAGAGGGTGAGGCCATGATACGGGGCCCTGCCAGGCCTGGAGACCATGGATGAAGGCCAGAAGAGGCTGGTGGCATAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR CCA 90 bp | TGGCCCATGCTGTGTATGCCACCAGCCTCTTCTGGCCTTCATCCATaGTCTCCAGGCCTGGCAGGGCCCCGTATCATGGCCTCACCCTCT | + |
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Preference number: 1 (lower is better) Translates to: WPMLCMPPASSGLHP*SPGLAGPRIMASPS Trigger: AGAGGGTGAGGCCATGATACGGGGCCCTGCCAGGCCTGGAGACCATGGATGAAGGCCAGAAGAGGCTGGTGGCATACACAGCATGGGCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR TCA 90 bp | CTGCAGGTGCAGGAATCCAGTTGCCCAAGCCCTGAGGTCTCTGCATaGTGCCTCATCCCTGGGCCTCTGCCCTCCATGAGGTCTAAGGCC | + |
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Preference number: 1 (lower is better) Translates to: LQVQESSCPSPEVSA*CLIPGPLPSMRSKA Trigger: GGCCTTAGACCTCATGGAGGGCAGAGGCCCAGGGATGAGGCATCATGCAGAGACCTCAGGGCTTGGGCAACTGGATTCCTGCACCTGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR GCA 90 bp | GCTCGCGGGTCAAAGCCCACGGAGGACCGAGGGAGGAAGAGGAAATaGCACAGTGTTCTGACTGCCACTCCTCCCGGCAAAGCGTTTCAC | + |
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Preference number: 1 (lower is better) Translates to: ARGSKPTEDRGRKRK*HSVLTATPPGKAFH Trigger: GTGAAACGCTTTGCCGGGAGGAGTGGCAGTCAGAACACTGTGGCATTTCCTCTTCCTCCCTCGGTCCTCCGTGGGCTTTGACCCGCGAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR CCA 90 bp | CAGGGCCCCGTATCATGGCCTCACCCTCTCCCTCAAGGTGAGTCCTaGAAAAACGGCTGGCACTTCTCACCCTACCTCCAGCCTCGTGAG | + |
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Preference number: 1 (lower is better) Translates to: QGPVSWPHPLPQGES*KNGWHFSPYLQPRE Trigger: CTCACGAGGCTGGAGGTAGGGTGAGAAGTGCCAGCCGTTTTTCCAGGACTCACCTTGAGGGAGAGGGTGAGGCCATGATACGGGGCCCTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR CCA 90 bp | CCCCAGAGTAGCATGGCCCATGCTGTGTATGCCACCAGCCTCTTCTaGCCTTCATCCATGGTCTCCAGGCCTGGCAGGGCCCCGTATCAT | + |
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Preference number: 1 (lower is better) Translates to: PQSSMAHAVYATSLF*PSSMVSRPGRAPYH Trigger: ATGATACGGGGCCCTGCCAGGCCTGGAGACCATGGATGAAGGCCAGAAGAGGCTGGTGGCATACACAGCATGGGCCATGCTACTCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR GCA 90 bp | GGGACAGCAAGGCAAGTGGAGGCCCAAAGGCCTCTCCCCTCAGAATaGCCACTCAGGAAGGTGAGGCCAGAATGCCACCATCATGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: GTARQVEAQRPLPSE*PLRKVRPECHHHGG Trigger: TCCTCCATGATGGTGGCATTCTGGCCTCACCTTCCTGAGTGGGCATTCTGAGGGGAGAGGCCTTTGGGCCTCCACTTGCCTTGCTGTCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR GCA 90 bp | TTGCAGCAGCAGGAATGTGTGAGAGTGACCATTCGGGATGCAGGATaGTCGCGGGTCAAAGCCCACGGAGGACCGAGGGAGGAAGAGGAA | + |
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Preference number: 1 (lower is better) Translates to: LQQQECVRVTIRDAG*SRVKAHGGPREEEE Trigger: TTCCTCTTCCTCCCTCGGTCCTCCGTGGGCTTTGACCCGCGAGCATCCTGCATCCCGAATGGTCACTCTCACACATTCCTGCTGCTGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR GCA 90 bp | GAGGAATTTGCAGCAGCAGGAATGTGTGAGAGTGACCATTCGGGATaGAGGATGCTCGCGGGTCAAAGCCCACGGAGGACCGAGGGAGGA | + |
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Preference number: 1 (lower is better) Translates to: EEFAAAGMCESDHSG*RMLAGQSPRRTEGG Trigger: TCCTCCCTCGGTCCTCCGTGGGCTTTGACCCGCGAGCATCCTGCATCCCGAATGGTCACTCTCACACATTCCTGCTGCTGCAAATTCCTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR CCA 90 bp | GCTGGCACTTCTCACCCTACCTCCAGCCTCGTGAGTGTTGCACAGTaGTGTGTCCTGACTGAACGTGGACGGAGGTCCTCTCTCTCTACC | + |
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Preference number: 1 (lower is better) Translates to: AGTSHPTSSLVSVAQ*CVLTERGRRSSLST Trigger: GGTAGAGAGAGAGGACCTCCGTCCACGTTCAGTCAGGACACACCACTGTGCAACACTCACGAGGCTGGAGGTAGGGTGAGAAGTGCCAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR CCA 90 bp | TGTGGCTCCCTGGTTCAGGCAGCATCCTCTCACCCCAGAGTAGCATaGCCCATGCTGTGTATGCCACCAGCCTCTTCTGGCCTTCATCCA | + |
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Preference number: 1 (lower is better) Translates to: CGSLVQAASSHPRVA*PMLCMPPASSGLHP Trigger: TGGATGAAGGCCAGAAGAGGCTGGTGGCATACACAGCATGGGCCATGCTACTCTGGGGTGAGAGGATGCTGCCTGAACCAGGGAGCCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR TCA 90 bp | GCAAGGGAGGCCGCAGGTAAGGGAGATTTCATGGCAGGACCTCAGTaGACTCAGACCCAAGAGTGTCAGAGAAGAGCTGAGCCATCTCCC | + |
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Preference number: 1 (lower is better) Translates to: AREAAGKGDFMAGPQ*TQTQECQRRAEPSP Trigger: GGGAGATGGCTCAGCTCTTCTCTGACACTCTTGGGTCTGAGTTCACTGAGGTCCTGCCATGAAATCTCCCTTACCTGCGGCCTCCCTTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR TCA 90 bp | CACTTAACTCTTAAGTCAGGCCAGAGCATGTGCAAGGGGGACAGCTaGGGTGCTGGTCCAGGCTGGCGGAGACAGGATGACAATGTGCCA | + |
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Preference number: 1 (lower is better) Translates to: HLTLKSGQSMCKGDS*GAGPGWRRQDDNVP Trigger: TGGCACATTGTCATCCTGTCTCCGCCAGCCTGGACCAGCACCTCAGCTGTCCCCCTTGCACATGCTCTGGCCTGACTTAAGAGTTAAGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR CCA 90 bp | CGGCTCTGCCTTAGGCAAGGGAGGCCGCAGGTAAGGGAGATTTCATaGCAGGACCTCAGTGAACTCAGACCCAAGAGTGTCAGAGAAGAG | + |
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Preference number: 1 (lower is better) Translates to: RLCLRQGRPQVREIS*QDLSELRPKSVREE Trigger: CTCTTCTCTGACACTCTTGGGTCTGAGTTCACTGAGGTCCTGCCATGAAATCTCCCTTACCTGCGGCCTCCCTTGCCTAAGGCAGAGCCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR CCA 90 bp | GGCAGTAAGCAACTGAGTGAGTCTGGTGGGGTCTGCCTCCCTTCCTaGGTTGTCCTGAGACTCTGTTTCAGTCTGGGCAGAGGAACATGT | + |
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Preference number: 1 (lower is better) Translates to: GSKQLSESGGVCLPS*VVLRLCFSLGRGTC Trigger: ACATGTTCCTCTGCCCAGACTGAAACAGAGTCTCAGGACAACCCAGGAAGGGAGGCAGACCCCACCAGACTCACTCAGTTGCTTACTGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR CCA 90 bp | GAGAAAAGCAGCTACCACGTGAAGGCCCGAGAGAGAGTGAGGATCTaGATCCCAGATAGGTGCTCAGTCAGTTCCACAGGCCCCTGTCTT | + |
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Preference number: 1 (lower is better) Translates to: EKSSYHVKARERVRI*IPDRCSVSSTGPCL Trigger: AAGACAGGGGCCTGTGGAACTGACTGAGCACCTATCTGGGATCCAGATCCTCACTCTCTCTCGGGCCTTCACGTGGTAGCTGCTTTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR CCA 90 bp | TCCTCCAATAACACCACAATTCCATCTCCTGGAACTGGCAACTTGTaGGACCAATCTGCCGAGAGCTCCCCGCTATCCTCTCTCACCCCC | + |
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Preference number: 1 (lower is better) Translates to: SSNNTTIPSPGTGNL*DQSAESSPLSSLTP Trigger: GGGGGTGAGAGAGGATAGCGGGGAGCTCTCGGCAGATTGGTCCCACAAGTTGCCAGTTCCAGGAGATGGAATTGTGGTGTTATTGGAGGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR CCA 90 bp | GCATTGCAAGCAGAAAGTGCATTCGAAACCAATAGCGTGCACTCCTaGCTCTCTGGCCACCAAGGGACAGCAAGGCAAGTGGAGGCCCAA | + |
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Preference number: 1 (lower is better) Translates to: ALQAESAFETNSVHS*LSGHQGTARQVEAQ Trigger: TTGGGCCTCCACTTGCCTTGCTGTCCCTTGGTGGCCAGAGAGCCAGGAGTGCACGCTATTGGTTTCGAATGCACTTTCTGCTTGCAATGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR TCA 90 bp | GGCAGGACCTCAGTGAACTCAGACCCAAGAGTGTCAGAGAAGAGCTaGGCCATCTCCCCTAGCCTTACTCGGTGTGGTCTTCTAGCATGT | + |
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Preference number: 1 (lower is better) Translates to: GRTSVNSDPRVSEKS*AISPSLTRCGLLAC Trigger: ACATGCTAGAAGACCACACCGAGTAAGGCTAGGGGAGATGGCTCAGCTCTTCTCTGACACTCTTGGGTCTGAGTTCACTGAGGTCCTGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR GCA 90 bp | CAGACAAGGCATTGCAAGCAGAAAGTGCATTCGAAACCAATAGCGTaGACTCCTGGCTCTCTGGCCACCAAGGGACAGCAAGGCAAGTGG | + |
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Preference number: 1 (lower is better) Translates to: QTRHCKQKVHSKPIA*TPGSLATKGQQGKW Trigger: CCACTTGCCTTGCTGTCCCTTGGTGGCCAGAGAGCCAGGAGTGCACGCTATTGGTTTCGAATGCACTTTCTGCTTGCAATGCCTTGTCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR CCA 90 bp | TGGCCTAGCACTGGGCATCTAACAAGGGTCTTCTCCCCAATGCTGTaGGGGCAGTGGAAGCCTGACTTCTCAGAGTTTCTGTATCTTGTC | + |
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Preference number: 1 (lower is better) Translates to: WPSTGHLTRVFSPML*GQWKPDFSEFLYLV Trigger: GACAAGATACAGAAACTCTGAGAAGTCAGGCTTCCACTGCCCCCACAGCATTGGGGAGAAGACCCTTGTTAGATGCCCAGTGCTAGGCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR CCA 90 bp | ACTGGGCATCTAACAAGGGTCTTCTCCCCAATGCTGTGGGGGCAGTaGAAGCCTGACTTCTCAGAGTTTCTGTATCTTGTCTTTGAGGTT | + |
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Preference number: 1 (lower is better) Translates to: TGHLTRVFSPMLWGQ*KPDFSEFLYLVFEV Trigger: AACCTCAAAGACAAGATACAGAAACTCTGAGAAGTCAGGCTTCCACTGCCCCCACAGCATTGGGGAGAAGACCCTTGTTAGATGCCCAGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR GCA 90 bp | CTGCACCCTGGCAGGCTCTCTGGCTGGGCAGCCATGGACGGCAGTGGCCTCCATCAGGCCGGCAGGTGGTaGAGGGTGGCCATCGGAGAG | + |
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Preference number: 2 (lower is better) Translates to: LHPGRLSGWAAMDGSGLHQAGRW*RVAIGE Trigger: CTCTCCGATGGCCACCCTGCACCACCTGCCGGCCTG...ATGGAGGCCACTGCCGTCCATGGCTGCCCAGCCAGAGAGCCTGCCAGGGTGCAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR CCA 90 bp | CACTGCACCCTGGCAGGCTCTCTGGCTGGGCAGCCATGGACGGCAGTGGCCTCCCCGCCCCGGCATCTTTaGCAAGTCTGCAGGTGCAGG | + |
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Preference number: 2 (lower is better) Translates to: HCTLAGSLAGQPWTAVASPPRHL*QVCRCR Trigger: CCTGCACCTGCAGACTTGCCAAAGATGCCGGGGCGG...GGAGGCCACTGCCGTCCATGGCTGCCCAGCCAGAGAGCCTGCCAGGGTGCAGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR TCA 90 bp | GGGTGCTCCAGGGGGCCTGACCTGGCGGTGCCACACTGCACCCTGGCAGGCTCTCAGTTGCCCAAGCCCTaGGGTCTCTGCATGATGCCT | + |
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Preference number: 2 (lower is better) Translates to: GCSRGPDLAVPHCTLAGSQLPKP*GLCMMP Trigger: AGGCATCATGCAGAGACCTCAGGGCTTGGGCAACTG...AGAGCCTGCCAGGGTGCAGTGTGGCACCGCCAGGTCAGGCCCCCTGGAGCACCC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR TCA 90 bp | GGCTCTCTGGCTGGGCAGCCATGGACGGCAGTGGCCTCCATGGGGCAGACTCTCGCAGACACCCATCGTTaGAGGGGCTTCCTCGCTGAC | + |
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Preference number: 2 (lower is better) Translates to: GSLAGQPWTAVASMGQTLADTHR*RGFLAD Trigger: GTCAGCGAGGAAGCCCCTTCAACGATGGGTGTCTGC...GAGAGTCTGCCCCATGGAGGCCACTGCCGTCCATGGCTGCCCAGCCAGAGAGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCCTGGCAGGGCCCCGTATCATGGCCTCACCCTCTCCCTCAAGGTGAGTCCGGCCTCTGCCCTCCATaGGGTCTAAGGCCAAGGATG | + |
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Preference number: 2 (lower is better) Translates to: QAWQGPVSWPHPLPQGESGLCPP*GLRPRM Trigger: CATCCTTGGCCTTAGACCTCATGGAGGGCAGAGGCC...GGACTCACCTTGAGGGAGAGGGTGAGGCCATGATACGGGGCCCTGCCAGGCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR GCA 90 bp | AAACCCGGGCAGGGTGCTCCAGGGGGCCTGACCTGGCGGTGCCACACTGCACCCTGGCAAGTCTGCAGGTaGAGGAATCCAGTTGCCCAA | + |
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Preference number: 2 (lower is better) Translates to: KPGQGAPGGLTWRCHTAPWQVCR*RNPVAQ Trigger: TTGGGCAACTGGATTCCTGCACCTGCAGACTTGCCA...GGGTGCAGTGTGGCACCGCCAGGTCAGGCCCCCTGGAGCACCCTGCCCGGGTTT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR TCA 90 bp | CTCCATGGGGCAGACTCTCCACCCCACATAGGAACAAGTGTCAGTGTGAGGAAGAAGGGGCTTCCTCGCTaGCACCCTGCCCGCCCCGGC | + |
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Preference number: 2 (lower is better) Translates to: LHGADSPPHIGTSVSVRKKGLPR*HPARPG Trigger: GCCGGGGCGGGCAGGGTGTCAGCGAGGAAGCCCCTT...CTTCCTCACACTGACACTTGTTCCTATGTGGGGTGGAGAGTCTGCCCCATGGAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR GCA 90 bp | AAGCATGCCCTGCTGATGTGGCTCCCTGGTTCAGGCAGCATCCTCTCACCCCAGCTGGCGGTGCCACACTaGACCCTGGCAGGCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: KHALLMWLPGSGSILSPQLAVPH*TLAGSL Trigger: CAGAGAGCCTGCCAGGGTGCAGTGTGGCACCGCCAG...CTGGGGTGAGAGGATGCTGCCTGAACCAGGGAGCCACATCAGCAGGGCATGCTT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGCCTGGCAGGGCCCCGTATCATGGCCTCACCCTCTCCCTCAAGGTGAGTCCATGATGCCTCATCCCTaGGCCTCTGCCCTCCATGAG | + |
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Preference number: 2 (lower is better) Translates to: QAWQGPVSWPHPLPQGESMMPHP*ASALHE Trigger: CTCATGGAGGGCAGAGGCCCAGGGATGAGGCATCAT...GGACTCACCTTGAGGGAGAGGGTGAGGCCATGATACGGGGCCCTGCCAGGCCTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR CCA 90 bp | AACATGTCTGCTTCCACTCTCCGGATCAGGGTGAGGAGAGCGGGGTCTGAACCACCAGGGGGCCTGACCTaGCGGTGCCACACTGCACCC | + |
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Preference number: 2 (lower is better) Translates to: NMSASTLRIRVRRAGSEPPGGLT*RCHTAP Trigger: GGGTGCAGTGTGGCACCGCCAGGTCAGGCCCCCTGG...TGGTTCAGACCCCGCTCTCCTCACCCTGATCCGGAGAGTGGAAGCAGACATGTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR TCA 90 bp | CGAGAGAGAGTGAGGATCTGGATCCCAGATAGGTGCTCAGTCAGTTCCACAGGCGTGCTCCAGGGGGCCTaGCCTGGCGGTGCCACACTG | + |
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Preference number: 2 (lower is better) Translates to: RERVRIWIPDRCSVSSTGVLQGA*PGGATL Trigger: CAGTGTGGCACCGCCAGGTCAGGCCCCCTGGAGCAC...GCCTGTGGAACTGACTGAGCACCTATCTGGGATCCAGATCCTCACTCTCTCTCG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR TCA 90 bp | ATCTGGATCCCAGATAGGTGCTCAGTCAGTTCCACAGGCCCCTGTCTTTACGGAGTGCTCCAGGGGGCCTaGCCTGGCGGTGCCACACTG | + |
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Preference number: 2 (lower is better) Translates to: IWIPDRCSVSSTGPCLYGVLQGA*PGGATL Trigger: CAGTGTGGCACCGCCAGGTCAGGCCCCCTGGAGCAC...TCCGTAAAGACAGGGGCCTGTGGAACTGACTGAGCACCTATCTGGGATCCAGAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR CCA 90 bp | GCCATGGACGGCAGTGGCCTCCATGGGGCAGACTCTCCACCCCACATAGGAACAATGATGCCTCATCCCTaGGCCTCTGCCCTCCATGAG | + |
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Preference number: 2 (lower is better) Translates to: AMDGSGLHGADSPPHIGTMMPHP*ASALHE Trigger: CTCATGGAGGGCAGAGGCCCAGGGATGAGGCATCAT...TGTTCCTATGTGGGGTGGAGAGTCTGCCCCATGGAGGCCACTGCCGTCCATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR GCA 90 bp | CGAGAGAGAGTGAGGATCTGGATCCCAGATAGGTGCTCAGTCAGTTCCACAGGCCTGGCGGTGCCACACTaGACCCTGGCAGGCTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: RERVRIWIPDRCSVSSTGLAVPH*TLAGSL Trigger: CAGAGAGCCTGCCAGGGTGCAGTGTGGCACCGCCAG...GCCTGTGGAACTGACTGAGCACCTATCTGGGATCCAGATCCTCACTCTCTCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR CCA 90 bp | CGAGAGAGAGTGAGGATCTGGATCCCAGATAGGTGCTCAGTCAGTTCCACAGGCCGGCAGTGGCCTCCATaGGGCAGACTCTCCACCCCA | + |
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Preference number: 2 (lower is better) Translates to: RERVRIWIPDRCSVSSTGRQWPP*GRLSTP Trigger: TGGGGTGGAGAGTCTGCCCCATGGAGGCCACTGCCG...GCCTGTGGAACTGACTGAGCACCTATCTGGGATCCAGATCCTCACTCTCTCTCG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR-3UTR CCA 90 bp | AGAGTAGCATGGCCCATGCTGTGTATGCCACCAGCCTCTTCTGGCCTTCATCCATGCCACACTGCACCCTaGCAGGCTCTCTGGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: RVAWPMLCMPPASSGLHPCHTAP*QALWLG Trigger: GCCCAGCCAGAGAGCCTGCCAGGGTGCAGTGTGGCA...TGGATGAAGGCCAGAAGAGGCTGGTGGCATACACAGCATGGGCCATGCTACTCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR TCA 90 bp | AGCTGGCTGTGGAGAAATGCCAGAGGCTGCGCCAGGCATTTCCTTGAGGTCACCCAGTTGCCCAAGCCCTaGGGTCTCTGCATGATGCCT | + |
|
Preference number: 2 (lower is better) Translates to: SWLWRNARGCARHFLEVTQLPKP*GLCMMP Trigger: AGGCATCATGCAGAGACCTCAGGGCTTGGGCAACTG...GGTGACCTCAAGGAAATGCCTGGCGCAGCCTCTGGCATTTCTCCACAGCCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR-3UTR TCA 90 bp | AACATGTCTGCTTCCACTCTCCGGATCAGGGTGAGGAGAGCGGGGTCTGAACCAGCAGACACCCATCGTTaGAGGGGCTTCCTCGCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: NMSASTLRIRVRRAGSEPADTHR*RGFLAD Trigger: GTCAGCGAGGAAGCCCCTTCAACGATGGGTGTCTGC...TGGTTCAGACCCCGCTCTCCTCACCCTGATCCGGAGAGTGGAAGCAGACATGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR GCA 90 bp | TTGCAAGCAGAAAGTGCATTCGAAACCAATAGCGTGCACTCCTGGCTCTCTGGCCAGGCCGGCAGGTGGTaGAGGGTGGCCATCGGAGAG | + |
|
Preference number: 2 (lower is better) Translates to: LQAESAFETNSVHSWLSGQAGRW*RVAIGE Trigger: CTCTCCGATGGCCACCCTGCACCACCTGCCGGCCTG...GCCAGAGAGCCAGGAGTGCACGCTATTGGTTTCGAATGCACTTTCTGCTTGCAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR-3UTR GCA 90 bp | GCCATGGACGGCAGTGGCCTCCATGGGGCAGACTCTCCACCCCACATAGGAACATGGCAAGTCTGCAGGTaGAGGAATCCAGTTGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: AMDGSGLHGADSPPHIGTWQVCR*RNPVAQ Trigger: TTGGGCAACTGGATTCCTGCACCTGCAGACTTGCCA...TGTTCCTATGTGGGGTGGAGAGTCTGCCCCATGGAGGCCACTGCCGTCCATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR CCA 90 bp | AGCTGGCTGTGGAGAAATGCCAGAGGCTGCGCCAGGCATTTCCTTGAGGTCACCGCCACCAGCCTCTTCTaGCCTTCATCCATGGTCTCC | + |
|
Preference number: 2 (lower is better) Translates to: SWLWRNARGCARHFLEVTATSLF*PSSMVS Trigger: GGAGACCATGGATGAAGGCCAGAAGAGGCTGGTGGC...GGTGACCTCAAGGAAATGCCTGGCGCAGCCTCTGGCATTTCTCCACAGCCAGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR-3UTR TCA 90 bp | GTGAGGAGAGCGGGGTCTGAACCAGAGGAATTTGCAGCAGCAGGAATGTGTGAGGGCCTCTGCCCTCCATaGGGTCTAAGGCCAAGGATG | + |
|
Preference number: 2 (lower is better) Translates to: VRRAGSEPEEFAAAGMCEGLCPP*GLRPRM Trigger: CATCCTTGGCCTTAGACCTCATGGAGGGCAGAGGCC...CTCACACATTCCTGCTGCTGCAAATTCCTCTGGTTCAGACCCCGCTCTCCTCAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGTATCAGTGTTGGCAAGACTGCTTGGCCTAGCACTGGGCATCTAACAAGGCGGCAGTGGCCTCCATaGGGCAGACTCTCCACCCCA | + |
|
Preference number: 2 (lower is better) Translates to: LGISVGKTAWPSTGHLTRRQWPP*GRLSTP Trigger: TGGGGTGGAGAGTCTGCCCCATGGAGGCCACTGCCG...CCTTGTTAGATGCCCAGTGCTAGGCCAAGCAGTCTTGCCAACACTGATACCCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCATTGCTAGACCAGAGAACACCTGGCCTGGTGGGAAACAGCGTAAAGAGCCAAGCCATGGACGGCAGTaGCCTCCATGGGGCAGACTC | + |
|
Preference number: 2 (lower is better) Translates to: VIARPENTWPGGKQRKEPSHGRQ*PPWGRL Trigger: GAGTCTGCCCCATGGAGGCCACTGCCGTCCATGGCT...TGGCTCTTTACGCTGTTTCCCACCAGGCCAGGTGTTCTCTGGTCTAGCAATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR CCA 90 bp | GTCATTGCTAGACCAGAGAACACCTGGCCTGGTGGGAAACAGCGTAAAGAGCCACATGGTCTCCAGGCCTaGCAGGGCCCCGTATCATGG | + |
|
Preference number: 2 (lower is better) Translates to: VIARPENTWPGGKQRKEPHGLQA*QGPVSW Trigger: CCATGATACGGGGCCCTGCCAGGCCTGGAGACCATG...TGGCTCTTTACGCTGTTTCCCACCAGGCCAGGTGTTCTCTGGTCTAGCAATGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR CCA 90 bp | GTTTCAGTCTGGGCAGAGGAACATGTCTGCTTCCACTCTCCGGATCAGGGTGAGTCTGGCCTTCATCCATaGTCTCCAGGCCTGGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: VSVWAEEHVCFHSPDQGESGLHP*SPGLAG Trigger: CCCTGCCAGGCCTGGAGACCATGGATGAAGGCCAGA...CTCACCCTGATCCGGAGAGTGGAAGCAGACATGTTCCTCTGCCCAGACTGAAAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR CAA 90 bp | GCAGCTGGCTGTGGAGAAATGCCAGAGGCTGCGCCAGGCATTTCCTaGAGGTCACCTGCAAACCAAGAGGACTTTCTGAGTCAGGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: AAGCGEMPEAAPGIS*RSPANQEDFLSQVC Trigger: GCAGACCTGACTCAGAAAGTCCTCTTGGTTTGCAGGTGACCTCAAGGAAATGCCTGGCGCAGCCTCTGGCATTTCTCCACAGCCAGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR-3UTR CCA 90 bp | GAGAACACCTGGCCTGGTGGGAAACAGCGTAAAGAGCCAAATAGCACGAGAAAACTGGCTGGGCAGCCATaGACGGCAGTGGCCTCCATG | + |
|
Preference number: 2 (lower is better) Translates to: ENTWPGGKQRKEPNSTRKLAGQP*TAVASM Trigger: CATGGAGGCCACTGCCGTCCATGGCTGCCCAGCCAG...TTTTCTCGTGCTATTTGGCTCTTTACGCTGTTTCCCACCAGGCCAGGTGTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAGATTTCATGGCAGGACCTCAGTGAACTCAGACCCAAGAGTGTCAGAGAATGCCACACTGCACCCTaGCAGGCTCTCTGGCTGGGC | + |
|
Preference number: 2 (lower is better) Translates to: REISWQDLSELRPKSVRECHTAP*QALWLG Trigger: GCCCAGCCAGAGAGCCTGCCAGGGTGCAGTGTGGCA...TTCTCTGACACTCTTGGGTCTGAGTTCACTGAGGTCCTGCCATGAAATCTCCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR-3UTR GCA 90 bp | ACCAAGGGACAGCAAGGCAAGTGGAGGCCCAAAGGCCTCTCCCCTCAGAATGCCCATCTTTGGCAAGTCTaGAGGTGCAGGAATCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TKGQQGKWRPKGLSPQNAHLWQV*RCRNPV Trigger: AACTGGATTCCTGCACCTGCAGACTTGCCAAAGATG...GGCATTCTGAGGGGAGAGGCCTTTGGGCCTCCACTTGCCTTGCTGTCCCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR-3UTR CCA 90 bp | CTGCCTCCCTTCCTGGGTTGTCCTGAGACTCTGTTTCAGTCTGGGCAGAGGAACGTGAGTGTTGCACAGTaGTGTGTCCTGACTGAACGT | + |
|
Preference number: 2 (lower is better) Translates to: LPPFLGCPETLFQSGQRNVSVAQ*CVLTER Trigger: ACGTTCAGTCAGGACACACCACTGTGCAACACTCAC...GTTCCTCTGCCCAGACTGAAACAGAGTCTCAGGACAACCCAGGAAGGGAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR CCA 90 bp | CGAGAGAGAGTGAGGATCTGGATCCCAGATAGGTGCTCAGTCAGTTCCACAGGCCCTCAAGGTGAGTCCTaGAAAAACGGCTGGCACTTC | + |
|
Preference number: 2 (lower is better) Translates to: RERVRIWIPDRCSVSSTGPQGES*KNGWHF Trigger: GAAGTGCCAGCCGTTTTTCCAGGACTCACCTTGAGG...GCCTGTGGAACTGACTGAGCACCTATCTGGGATCCAGATCCTCACTCTCTCTCG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR CCA 90 bp | GGTTGGATGTCATTGCTAGACCAGAGAACACCTGGCCTGGTGGGAAACAGCGTAGTCCTGAGACCCACATaGCCCTTTCCTTTCCCCTCA | + |
|
Preference number: 2 (lower is better) Translates to: GWMSLLDQRTPGLVGNSVVLRPT*PFPFPS Trigger: TGAGGGGAAAGGAAAGGGCCATGTGGGTCTCAGGAC...TACGCTGTTTCCCACCAGGCCAGGTGTTCTCTGGTCTAGCAATGACATCCAACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR TCA 90 bp | GTCATTGCTAGACCAGAGAACACCTGGCCTGGTGGGAAACAGCGTAAAGAGCCAGGGGCAGTGGAAGCCTaGCTTCTCAGAGTTTCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: VIARPENTWPGGKQRKEPGAVEA*LLRVSV Trigger: TACAGAAACTCTGAGAAGTCAGGCTTCCACTGCCCC...TGGCTCTTTACGCTGTTTCCCACCAGGCCAGGTGTTCTCTGGTCTAGCAATGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR GCA 90 bp | ATCTGGATCCCAGATAGGTGCTCAGTCAGTTCCACAGGCCCCTGTCTTTACGGAGCAGAGGAACATGTCTaGTTCCACTCTCCGGATCAG | + |
|
Preference number: 2 (lower is better) Translates to: IWIPDRCSVSSTGPCLYGAEEHV*FHSPDQ Trigger: CTGATCCGGAGAGTGGAAGCAGACATGTTCCTCTGC...TCCGTAAAGACAGGGGCCTGTGGAACTGACTGAGCACCTATCTGGGATCCAGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCCTTGAGGTCACCTGCAAACCAAGAGGACTTTCTGAGTCAGGTCTGCAAATTTCTGGCCTTCATCCATaGTCTCCAGGCCTGGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: FLEVTCKPRGLSESGLQISGLHP*SPGLAG Trigger: CCCTGCCAGGCCTGGAGACCATGGATGAAGGCCAGA...AATTTGCAGACCTGACTCAGAAAGTCCTCTTGGTTTGCAGGTGACCTCAAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR-3UTR CCA 90 bp | CTCTGTGCATGGAGACCTCTGTGCCGTGAAGACTCTGCAGATGACTATGCAACCGACTCTGTTTCAGTCTaGGCAGAGGAACATGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: LCAWRPLCREDSADDYATDSVSV*AEEHVC Trigger: GCAGACATGTTCCTCTGCCCAGACTGAAACAGAGTC...GGTTGCATAGTCATCTGCAGAGTCTTCACGGCACAGAGGTCTCCATGCACAGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR-3UTR CCA 90 bp | TCATTGCTAGACCAGAGAACACCTGGCCTGGTGGGAAACAGCGTAAAGAGCCAAGACTCTGTTTCAGTCTaGGCAGAGGAACATGTCTGC | + |
|
Preference number: 2 (lower is better) Translates to: SLLDQRTPGLVGNSVKSQDSVSV*AEEHVC Trigger: GCAGACATGTTCCTCTGCCCAGACTGAAACAGAGTC...TTGGCTCTTTACGCTGTTTCCCACCAGGCCAGGTGTTCTCTGGTCTAGCAATGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCTGTGCATGGAGACCTCTGTGCCGTGAAGACTCTGCAGATGACTATGCAACCCTCACCCCCAAAACTTaGATCCTGAACGTACTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LCAWRPLCREDSADDYATLTPKT*ILNVLK Trigger: TTTCAGTACGTTCAGGATTCAAGTTTTGGGGGTGAG...GGTTGCATAGTCATCTGCAGAGTCTTCACGGCACAGAGGTCTCCATGCACAGAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR-3UTR GCA 90 bp | TCATTGCTAGACCAGAGAACACCTGGCCTGGTGGGAAACAGCGTAAAGAGCCAACATCTTTGGCAAGTCTaGAGGTGCAGGAATCCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: SLLDQRTPGLVGNSVKSQHLWQV*RCRNPV Trigger: AACTGGATTCCTGCACCTGCAGACTTGCCAAAGATG...TTGGCTCTTTACGCTGTTTCCCACCAGGCCAGGTGTTCTCTGGTCTAGCAATGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR CCA 90 bp | AGGGAGATTTCATGGCAGGACCTCAGTGAACTCAGACCCAAGAGTGTCAGAGAATCCATCTCCTGGAACTaGCAACTTGTGGGACCAATC | + |
|
Preference number: 2 (lower is better) Translates to: REISWQDLSELRPKSVRESISWN*QLVGPI Trigger: GATTGGTCCCACAAGTTGCCAGTTCCAGGAGATGGA...TTCTCTGACACTCTTGGGTCTGAGTTCACTGAGGTCCTGCCATGAAATCTCCCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGCAAGCAGAAAGTGCATTCGAAACCAATAGCGTGCACTCCTGGCTCTCTGGCGTAAGGGAGATTTCATaGCAGGACCTCAGTGAACTC | + |
|
Preference number: 2 (lower is better) Translates to: LQAESAFETNSVHSWLSGVREIS*QDLSEL Trigger: GAGTTCACTGAGGTCCTGCCATGAAATCTCCCTTAC...GCCAGAGAGCCAGGAGTGCACGCTATTGGTTTCGAATGCACTTTCTGCTTGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR-3UTR TCA 90 bp | GGTTGGATGTCATTGCTAGACCAGAGAACACCTGGCCTGGTGGGAAACAGCGTATCTGTATCTTGTCTTTaGGGTTACATGGGCTACAGT | + |
|
Preference number: 2 (lower is better) Translates to: GWMSLLDQRTPGLVGNSVSVSCL*GYMGYS Trigger: ACTGTAGCCCATGTAACCTCAAAGACAAGATACAGA...TACGCTGTTTCCCACCAGGCCAGGTGTTCTCTGGTCTAGCAATGACATCCAACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR-3UTR GCA 90 bp | TGTCATTCCTCCAATAACACCACAATTCCATCTCCTGGAACTGGCAACTTGTGGTGGCAAGTCTGCAGGTaGAGGAATCCAGTTGCCCAA | + |
|
Preference number: 2 (lower is better) Translates to: CHSSNNTTIPSPGTGNLWWQVCR*RNPVAQ Trigger: TTGGGCAACTGGATTCCTGCACCTGCAGACTTGCCA...CCACAAGTTGCCAGTTCCAGGAGATGGAATTGTGGTGTTATTGGAGGAATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR-3UTR GCA 90 bp | TGTCATTCCTCCAATAACACCACAATTCCATCTCCTGGAACTGGCAACTTGTGGGCAGAGGAACATGTCTaGTTCCACTCTCCGGATCAG | + |
|
Preference number: 2 (lower is better) Translates to: CHSSNNTTIPSPGTGNLWAEEHV*FHSPDQ Trigger: CTGATCCGGAGAGTGGAAGCAGACATGTTCCTCTGC...CCACAAGTTGCCAGTTCCAGGAGATGGAATTGTGGTGTTATTGGAGGAATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR CAA 90 bp | GGCGCCATGCTTGCTTTCTGTTTGTTTCTACCTGAACTCTGCACCTaGGGGGAAGATAGCTGTCATTCCTCCAATAACACCACAATTCCA | + |
|
Preference number: 2 (lower is better) Translates to: GAMLAFCLFLPELCT*GEDSCHSSNNTTIP Trigger: TGGAATTGTGGTGTTATTGGAGGAATGACAGCTATCTTCCCCCAAGGTGCAGAGTTCAGGTAGAAACAAACAGAAAGCAAGCATGGCGCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | CCAGGGGGCCTGACCTGGCGGTGCCACACTGCACCCTaGCAGGCTCTCTGGCTGGGCAGCCATGGACGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: PGGLTWRCHTAP*QALWLGSHGRQ Trigger: CTGCCGTCCATGGCTGCCCAGCCAGAGAGCCTGCCAGGGTGCAGTGTGGCACCGCCAGGTCAGGCCCCCTGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | ACCTGGCGGTGCCACACTGCACCCTGGCAGGCTCTCTaGCTGGGCAGCCATGGACGGCAGTGGCCTCCATGG | + |
|
Preference number: 3 (lower is better) Translates to: TWRCHTAPWQAL*LGSHGRQWPPW Trigger: CCATGGAGGCCACTGCCGTCCATGGCTGCCCAGCCAGAGAGCCTGCCAGGGTGCAGTGTGGCACCGCCAGGT 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | AGAGCAGGCAGGAGACATGACTCGGGTCCTCTTCCCTaGCACACGCAGTGTCCGGGTGGAGCCAGGCGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RAGRRHDSGPLP*HTQCPGGARRC Trigger: GCAGCGCCTGGCTCCACCCGGACACTGCGTGTGCCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTGCTCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | TGGCAGGCTCTCTGGCTGGGCAGCCATGGACGGCAGTaGCCTCCATGGGGCAGACTCTCCACCCCACATAGG | + |
|
Preference number: 3 (lower is better) Translates to: WQALWLGSHGRQ*PPWGRLSTPHR Trigger: CCTATGTGGGGTGGAGAGTCTGCCCCATGGAGGCCACTGCCGTCCATGGCTGCCCAGCCAGAGAGCCTGCCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR TCA 72 bp | GGTGCAGGGTGGCCATCGGAGAGCAGGCAGGAGACATaGCTCGGGTCCTCTTCCCTGGCACACGCAGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GAGWPSESRQET*LGSSSLAHAVS Trigger: GGACACTGCGTGTGCCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTGCTCTCCGATGGCCACCCTGCACC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR TCA 72 bp | CTGCATGATGCCTCATCCCTGGGCCTCTGCCCTCCATaGGGTCTAAGGCCAAGGATGTGGGCAGGGGAGGGC | + |
|
Preference number: 3 (lower is better) Translates to: LHDASSLGLCPP*GLRPRMWAGEG Trigger: GCCCTCCCCTGCCCACATCCTTGGCCTTAGACCTCATGGAGGGCAGAGGCCCAGGGATGAGGCATCATGCAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR GCA 72 bp | CCCTGCCCGCCCCGGCATCTTTGGCAAGTCTGCAGGTaGAGGAATCCAGTTGCCCAAGCCCTGAGGTCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: PCPPRHLWQVCR*RNPVAQALRSL Trigger: CAGAGACCTCAGGGCTTGGGCAACTGGATTCCTGCACCTGCAGACTTGCCAAAGATGCCGGGGCGGGCAGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | CCTGGCTCTCTGGCCACCAAGGGACAGCAAGGCAAGTaGAGGCCCAAAGGCCTCTCCCCTCAGAATGCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: PGSLATKGQQGK*RPKGLSPQNAH Trigger: GTGGGCATTCTGAGGGGAGAGGCCTTTGGGCCTCCACTTGCCTTGCTGTCCCTTGGTGGCCAGAGAGCCAGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR TCA 72 bp | CAGCTGAGGTGCTGGTCCAGGCTGGCGGAGACAGGATaGCAATGTGCCAGCGCAGAGTACAGAGGCGCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: QLRCWSRLAETG*QCASAEYRGAR Trigger: CCTTGCGCCTCTGTACTCTGCGCTGGCACATTGTCATCCTGTCTCCGCCAGCCTGGACCAGCACCTCAGCTG 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | GCTTCCTCGCTGACACCCTGCCCGCCCCGGCATCTTTaGCAAGTCTGCAGGTGCAGGAATCCAGTTGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: ASSLTPCPPRHL*QVCRCRNPVAQ Trigger: TTGGGCAACTGGATTCCTGCACCTGCAGACTTGCCAAAGATGCCGGGGCGGGCAGGGTGTCAGCGAGGAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | AGCATGGCCCATGCTGTGTATGCCACCAGCCTCTTCTaGCCTTCATCCATGGTCTCCAGGCCTGGCAGGGCC | + |
|
Preference number: 3 (lower is better) Translates to: SMAHAVYATSLF*PSSMVSRPGRA Trigger: GGCCCTGCCAGGCCTGGAGACCATGGATGAAGGCCAGAAGAGGCTGGTGGCATACACAGCATGGGCCATGCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR TCA 72 bp | CTTAAGTCAGGCCAGAGCATGTGCAAGGGGGACAGCTaGGGTGCTGGTCCAGGCTGGCGGAGACAGGATGAC | + |
|
Preference number: 3 (lower is better) Translates to: LKSGQSMCKGDS*GAGPGWRRQDD Trigger: GTCATCCTGTCTCCGCCAGCCTGGACCAGCACCTCAGCTGTCCCCCTTGCACATGCTCTGGCCTGACTTAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR GCA 72 bp | GCAGCAGCAGGAATGTGTGAGAGTGACCATTCGGGATaGAGGATGCTCGCGGGTCAAAGCCCACGGAGGACC | + |
|
Preference number: 3 (lower is better) Translates to: AAAGMCESDHSG*RMLAGQSPRRT Trigger: GGTCCTCCGTGGGCTTTGACCCGCGAGCATCCTGCATCCCGAATGGTCACTCTCACACATTCCTGCTGCTGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | AGAGAACGGGAACATGAGAAGGGATGCCAGGGGCCGTaGGGCAAAGAACAGACCCCAAGCATCTGGCACCCA | + |
|
Preference number: 3 (lower is better) Translates to: REREHEKGCQGP*GKEQTPSIWHP Trigger: TGGGTGCCAGATGCTTGGGGTCTGTTCTTTGCCCCACGGCCCCTGGCATCCCTTCTCATGTTCCCGTTCTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR TCA 72 bp | CAGCCTCGTGAGTGTTGCACAGTGGTGTGTCCTGACTaGACGTGGACGGAGGTCCTCTCTCTCTACCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: QPRECCTVVCPD*TWTEVLSLYPS Trigger: GGATGGGTAGAGAGAGAGGACCTCCGTCCACGTTCAGTCAGGACACACCACTGTGCAACACTCACGAGGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR TCA 72 bp | AGCGTTTCACTGTCCCCTGACCTAAGCATGCCCTGCTaGTGTGGCTCCCTGGTTCAGGCAGCATCCTCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: SVSLSPDLSMPC*CGSLVQAASSH Trigger: GTGAGAGGATGCTGCCTGAACCAGGGAGCCACATCAGCAGGGCATGCTTAGGTCAGGGGACAGTGAAACGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR GCA 72 bp | CCGAGGGAGGAAGAGGAAATGCCACAGTGTTCTGACTaGCACTCCTCCCGGCAAAGCGTTTCACTGTCCCCT | + |
|
Preference number: 3 (lower is better) Translates to: PREEEEMPQCSD*HSSRQSVSLSP Trigger: AGGGGACAGTGAAACGCTTTGCCGGGAGGAGTGGCAGTCAGAACACTGTGGCATTTCCTCTTCCTCCCTCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR GCA 72 bp | TCAAAGCCCACGGAGGACCGAGGGAGGAAGAGGAAATaGCACAGTGTTCTGACTGCCACTCCTCCCGGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: SKPTEDRGRKRK*HSVLTATPPGK Trigger: TTTGCCGGGAGGAGTGGCAGTCAGAACACTGTGGCATTTCCTCTTCCTCCCTCGGTCCTCCGTGGGCTTTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR GCA 72 bp | TCCATCTCCTGGAACTGGCAACTTGTGGGACCAATCTaGCGAGAGCTCCCCGCTATCCTCTCTCACCCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SISWNWQLVGPI*RELPAILSHPQ Trigger: TTGGGGGTGAGAGAGGATAGCGGGGAGCTCTCGGCAGATTGGTCCCACAAGTTGCCAGTTCCAGGAGATGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR GCA 72 bp | CCCTCAGAATGCCCACTCAGGAAGGTGAGGCCAGAATaGCACCATCATGGAGGAGGGGAGGGAGATGAGAGA | + |
|
Preference number: 3 (lower is better) Translates to: PSECPLRKVRPE*HHHGGGEGDER Trigger: TCTCTCATCTCCCTCCCCTCCTCCATGATGGTGGCATTCTGGCCTCACCTTCCTGAGTGGGCATTCTGAGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | TCTCACCCTACCTCCAGCCTCGTGAGTGTTGCACAGTaGTGTGTCCTGACTGAACGTGGACGGAGGTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: SHPTSSLVSVAQ*CVLTERGRRSS Trigger: AGAGGACCTCCGTCCACGTTCAGTCAGGACACACCACTGTGCAACACTCACGAGGCTGGAGGTAGGGTGAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR GCA 72 bp | CAGGGCAGTAAGCAACTGAGTGAGTCTGGTGGGGTCTaGCTCCCTTCCTGGGTTGTCCTGAGACTCTGTTTC | + |
|
Preference number: 3 (lower is better) Translates to: QGSKQLSESGGV*LPSWVVLRLCF Trigger: GAAACAGAGTCTCAGGACAACCCAGGAAGGGAGGCAGACCCCACCAGACTCACTCAGTTGCTTACTGCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR GCA 72 bp | GCCCGAGAGAGAGTGAGGATCTGGATCCCAGATAGGTaGTCAGTCAGTTCCACAGGCCCCTGTCTTTACGGA | + |
|
Preference number: 3 (lower is better) Translates to: ARERVRIWIPDR*SVSSTGPCLYG Trigger: TCCGTAAAGACAGGGGCCTGTGGAACTGACTGAGCACCTATCTGGGATCCAGATCCTCACTCTCTCTCGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | GTATCATGGCCTCACCCTCTCCCTCAAGGTGAGTCCTaGAAAAACGGCTGGCACTTCTCACCCTACCTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: VSWPHPLPQGES*KNGWHFSPYLQ Trigger: CTGGAGGTAGGGTGAGAAGTGCCAGCCGTTTTTCCAGGACTCACCTTGAGGGAGAGGGTGAGGCCATGATAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | CAACTGAGTGAGTCTGGTGGGGTCTGCCTCCCTTCCTaGGTTGTCCTGAGACTCTGTTTCAGTCTGGGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: QLSESGGVCLPS*VVLRLCFSLGR Trigger: TCTGCCCAGACTGAAACAGAGTCTCAGGACAACCCAGGAAGGGAGGCAGACCCCACCAGACTCACTCAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR TCA 72 bp | AGAGGAACATGTCTGCTTCCACTCTCCGGATCAGGGTaGGGAGAGCGGGGTCTGAACCAGAGGAATTTGCAG | + |
|
Preference number: 3 (lower is better) Translates to: RGTCLLPLSGSG*GERGLNQRNLQ Trigger: CTGCAAATTCCTCTGGTTCAGACCCCGCTCTCCTCACCCTGATCCGGAGAGTGGAAGCAGACATGTTCCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR TCA 72 bp | GTGTGGACAGCAATGGATCCTAAGGAGGAATGGTCCTaGGACCCACATGGCCCTTTCCTTTCCCCTCAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VWTAMDPKEEWS*DPHGPFLSPQQ Trigger: CTGCTGAGGGGAAAGGAAAGGGCCATGTGGGTCTCAGGACCATTCCTCCTTAGGATCCATTGCTGTCCACAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR GCA 72 bp | GCCAGAGGCTGCGCCAGGCATTTCCTTGAGGTCACCTaGAAACCAAGAGGACTTTCTGAGTCAGGTCTGCAA | + |
|
Preference number: 3 (lower is better) Translates to: ARGCARHFLEVT*KPRGLSESGLQ Trigger: TTGCAGACCTGACTCAGAAAGTCCTCTTGGTTTGCAGGTGACCTCAAGGAAATGCCTGGCGCAGCCTCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | CTTAGGCAAGGGAGGCCGCAGGTAAGGGAGATTTCATaGCAGGACCTCAGTGAACTCAGACCCAAGAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: LRQGRPQVREIS*QDLSELRPKSV Trigger: GACACTCTTGGGTCTGAGTTCACTGAGGTCCTGCCATGAAATCTCCCTTACCTGCGGCCTCCCTTGCCTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | GCAGAAAGTGCATTCGAAACCAATAGCGTGCACTCCTaGCTCTCTGGCCACCAAGGGACAGCAAGGCAAGTG | + |
|
Preference number: 3 (lower is better) Translates to: AESAFETNSVHS*LSGHQGTARQV Trigger: CACTTGCCTTGCTGTCCCTTGGTGGCCAGAGAGCCAGGAGTGCACGCTATTGGTTTCGAATGCACTTTCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR TCA 72 bp | GCCGCAGGTAAGGGAGATTTCATGGCAGGACCTCAGTaGACTCAGACCCAAGAGTGTCAGAGAAGAGCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: AAGKGDFMAGPQ*TQTQECQRRAE Trigger: CTCAGCTCTTCTCTGACACTCTTGGGTCTGAGTTCACTGAGGTCCTGCCATGAAATCTCCCTTACCTGCGGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | AACACCACAATTCCATCTCCTGGAACTGGCAACTTGTaGGACCAATCTGCCGAGAGCTCCCCGCTATCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: NTTIPSPGTGNL*DQSAESSPLSS Trigger: AGAGGATAGCGGGGAGCTCTCGGCAGATTGGTCCCACAAGTTGCCAGTTCCAGGAGATGGAATTGTGGTGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | GGAGGGGACAACCAATTCCATCCACCTGAAGTGAGCTaGGGGCTTGACCACTTAACTCTTAAGTCAGGCCAG | + |
|
Preference number: 3 (lower is better) Translates to: GGDNQFHPPEVS*GLDHLTLKSGQ Trigger: CTGGCCTGACTTAAGAGTTAAGTGGTCAAGCCCCCAGCTCACTTCAGGTGGATGGAATTGGTTGTCCCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR TCA 72 bp | TCAGTGAACTCAGACCCAAGAGTGTCAGAGAAGAGCTaGGCCATCTCCCCTAGCCTTACTCGGTGTGGTCTT | + |
|
Preference number: 3 (lower is better) Translates to: SVNSDPRVSEKS*AISPSLTRCGL Trigger: AAGACCACACCGAGTAAGGCTAGGGGAGATGGCTCAGCTCTTCTCTGACACTCTTGGGTCTGAGTTCACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR GCA 72 bp | GTCTCAGGACATCCACTCTGTGCATGGAGACCTCTGTaGCGTGAAGACTCTGCAGATGACTATGCAACCACA | + |
|
Preference number: 3 (lower is better) Translates to: VSGHPLCAWRPL*REDSADDYATT Trigger: TGTGGTTGCATAGTCATCTGCAGAGTCTTCACGGCACAGAGGTCTCCATGCACAGAGTGGATGTCCTGAGAC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR GCA 72 bp | CATTGCAAGCAGAAAGTGCATTCGAAACCAATAGCGTaGACTCCTGGCTCTCTGGCCACCAAGGGACAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: HCKQKVHSKPIA*TPGSLATKGQQ Trigger: TTGCTGTCCCTTGGTGGCCAGAGAGCCAGGAGTGCACGCTATTGGTTTCGAATGCACTTTCTGCTTGCAATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR-3UTR CAA 90 bp | TTGCAAGCAGAAAGTGCATTCGAAACCAATAGCGTGCACTCCTGGCTCTCTGGCGGGGTTTTAGGTTGGTaGGATGTCATTGCTAGACCA | + |
|
Preference number: 3 (lower is better) Translates to: LQAESAFETNSVHSWLSGGVLGW*DVIARP Trigger: TGGTCTAGCAATGACATCCAACCAACCTAAAACCCC...GCCAGAGAGCCAGGAGTGCACGCTATTGGTTTCGAATGCACTTTCTGCTTGCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR GCA 72 bp | CCCTACCCATCCACACTCATAATGCAGCAGGCGCCATaGTTGCTTTCTGTTTGTTTCTACCTGAACTCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: PYPSTLIMQQAP*LLSVCFYLNSA Trigger: TGCAGAGTTCAGGTAGAAACAAACAGAAAGCAAGCATGGCGCCTGCTGCATTATGAGTGTGGATGGGTAGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR GCA 72 bp | GCCATGCTTGCTTTCTGTTTGTTTCTACCTGAACTCTaGACCTTGGGGGAAGATAGCTGTCATTCCTCCAAT | + |
|
Preference number: 3 (lower is better) Translates to: AMLAFCLFLPEL*TLGEDSCHSSN Trigger: ATTGGAGGAATGACAGCTATCTTCCCCCAAGGTGCAGAGTTCAGGTAGAAACAAACAGAAAGCAAGCATGGC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | TCACTGTTATTCAAGGTGGTCAGAGGGGTTTTAGGTTaGTTGGATGTCATTGCTAGACCAGAGAACACCTGG | + |
|
Preference number: 3 (lower is better) Translates to: SLLFKVVRGVLG*LDVIARPENTW Trigger: CCAGGTGTTCTCTGGTCTAGCAATGACATCCAACCAACCTAAAACCCCTCTGACCACCTTGAATAACAGTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | AACTTGAATCCTGAACGTACTGAAAGTTCCACATCCTaGTCATCACTGTTATTCAAGGTGGTCAGAGGGGTT | + |
|
Preference number: 3 (lower is better) Translates to: NLNPERTESSTS*SSLLFKVVRGV Trigger: AACCCCTCTGACCACCTTGAATAACAGTGATGACCAGGATGTGGAACTTTCAGTACGTTCAGGATTCAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| 3UTR CCA 72 bp | TTGCTTTCTGTTTGTTTCTACCTGAACTCTGCACCTTaGGGGAAGATAGCTGTCATTCCTCCAATAACACCA | + |
|
Preference number: 3 (lower is better) Translates to: LLSVCFYLNSAP*GKIAVIPPITP Trigger: TGGTGTTATTGGAGGAATGACAGCTATCTTCCCCCAAGGTGCAGAGTTCAGGTAGAAACAAACAGAAAGCAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCCTGGCAGGGCCCCGTATCATGGCCTCACCCTCTCCCTCAAGGTGAGTCCGGAAGCCCGTCACCATaGCGATGGTGCCGATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: QAWQGPVSWPHPLPQGESGSPSP*RWCRWR Trigger: TCGCCATCGGCACCATCGTCATGGTGACGGGCTTCC...GGACTCACCTTGAGGGAGAGGGTGAGGCCATGATACGGGGCCCTGCCAGGCCTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR TCA 90 bp | GGGTGCTCCAGGGGGCCTGACCTGGCGGTGCCACACTGCACCCTGGCAGGCTCTTGTTCCAGGCGTTCTTaGGCCCCACGTTGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: GCSRGPDLAVPHCTLAGSCSRRS*APRCSL Trigger: CAGAGAACAACGTGGGGCTCAAGAACGCCTGGAACA...AGAGCCTGCCAGGGTGCAGTGTGGCACCGCCAGGTCAGGCCCCCTGGAGCACCC 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | AAACCCGGGCAGGGTGCTCCAGGGGGCCTGACCTGGCGGTGCCACACTGCACCCTTGCGCCCACAGCCCTaGGAATTCTCCATGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KPGQGAPGGLTWRCHTAPLRPQP*EFSMQH Trigger: ATGCTGCATGGAGAATTCCCAGGGCTGTGGGCGCAA...GGGTGCAGTGTGGCACCGCCAGGTCAGGCCCCCTGGAGCACCCTGCCCGGGTTT 66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR TCA 90 bp | CAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGCACACGCAGTGTCCGGGTGTGGTGCCGATGGCGATaGCGAGGTTGGCTGCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QAGDMTRVLFPGTRSVRVWCRWR*RGWLRT Trigger: TGTCCGCAGCCAACCTCGTCATCGCCATCGGCACCA...CACCCGGACACTGCGTGTGCCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGTGGCCATCGGAGAGCAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGTGGTGCCGATGGCGATaGCGAGGTTGGCTGCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QGGHRRAGRRHDSGPLPWWCRWR*RGWLRT Trigger: TGTCCGCAGCCAACCTCGTCATCGCCATCGGCACCA...CCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTGCTCTCCGATGGCCACCCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | GGCTCTCTGGCTGGGCAGCCATGGACGGCAGTGGCCTCCATGGGGCAGACTCTCACACAGAGAGCCAGATaGCCACTCCAAGCAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: GSLAGQPWTAVASMGQTLTQRAR*PLQAAH Trigger: GTGGGCTGCTTGGAGTGGGCATCTGGCTCTCTGTGT...GAGAGTCTGCCCCATGGAGGCCACTGCCGTCCATGGCTGCCCAGCCAGAGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGCACACGCAGTGTCCGGGTGAGGGGGTGGTGCTGTTaGGCCCACAGCCCTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: QAGDMTRVLFPGTRSVRVRGWCC*AHSPGN Trigger: ATTCCCAGGGCTGTGGGCGCAACAGCACCACCCCCT...CACCCGGACACTGCGTGTGCCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | GGGTGCTCCAGGGGGCCTGACCTGGCGGTGCCACACTGCACCCTGGCAGGCTCTCCTGTCCGGTGGATGTaGTGGAACAGTGTCATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: GCSRGPDLAVPHCTLAGSPVRWM*WNSVME Trigger: TTCCATGACACTGTTCCAGCACATCCACCGGACAGG...AGAGCCTGCCAGGGTGCAGTGTGGCACCGCCAGGTCAGGCCCCCTGGAGCACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | CACTGCACCCTGGCAGGCTCTCTGGCTGGGCAGCCATGGACGGCAGTGGCCTCCGTGGCGAAGTTGCCTTaGGACACAGAGAGCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: HCTLAGSLAGQPWTAVASVAKLP*DTESQM Trigger: CATCTGGCTCTCTGTGTCCCAAGGCAACTTCGCCAC...GGAGGCCACTGCCGTCCATGGCTGCCCAGCCAGAGAGCCTGCCAGGGTGCAGTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | ACCCTGGCAGGCTCTCTGGCTGGGCAGCCATGGACGGCAGTGGCCTCCATGGGGGTGGCGAAGTTGCCTTaGGACACAGAGAGCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: TLAGSLAGQPWTAVASMGVAKLP*DTESQM Trigger: CATCTGGCTCTCTGTGTCCCAAGGCAACTTCGCCAC...CCCCATGGAGGCCACTGCCGTCCATGGCTGCCCAGCCAGAGAGCCTGCCAGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | GGCTCTCTGGCTGGGCAGCCATGGACGGCAGTGGCCTCCATGGGGCAGACTCTCCACCGCATCTCGGCCTaGATGATGTTCCAGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GSLAGQPWTAVASMGQTLHRISA*MMFQAF Trigger: GAACGCCTGGAACATCATCCAGGCCGAGATGCGGTG...GAGAGTCTGCCCCATGGAGGCCACTGCCGTCCATGGCTGCCCAGCCAGAGAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | ACCCGGGCAGGGTGCTCCAGGGGGCCTGACCTGGCGGTGCCACACTGCACCCTGGTCCGGTGGATGTGCTaGAACAGTGTCATGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: TRAGCSRGPDLAVPHCTLVRWMC*NSVMEK Trigger: CTTTTCCATGACACTGTTCCAGCACATCCACCGGAC...CAGGGTGCAGTGTGGCACCGCCAGGTCAGGCCCCCTGGAGCACCCTGCCCGGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR CAA 72 bp | GGCTTCCTCGCTGACACCCTGCCCGCCCCGGCATCTTaGGCAAGTCTGCAGGTGCAGGAATCCAGTTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: GFLADTLPAPAS*ASLQVQESSCP Trigger: TGGGCAACTGGATTCCTGCACCTGCAGACTTGCCAAAGATGCCGGGGCGGGCAGGGTGTCAGCGAGGAAGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | GGAGAGCAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGCACACGCAGTGTCAGGGGGTGGTGCTGTTaGGCCCACAGCCCTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: GEQAGDMTRVLFPGTRSVRGWCC*AHSPGN Trigger: ATTCCCAGGGCTGTGGGCGCAACAGCACCACCCCCT...GACACTGCGTGTGCCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTGCTCTCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | GGGTGCTCCAGGGGGCCTGACCTGGCGGTGCCACACTGCACCCTGGCAGGCTCTGCCATTCCCAGGATCTaGATGATGAGGATGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: GCSRGPDLAVPHCTLAGSAIPRI*MMRMHM Trigger: CATGTGCATCCTCATCATGCAGATCCTGGGAATGGC...AGAGCCTGCCAGGGTGCAGTGTGGCACCGCCAGGTCAGGCCCCCTGGAGCACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTGGCAGGCTCTCTGGCTGGGCAGCCATGGACGGCAGTGGCCTCCATGGGGCCTGTCCGGTGGATGTaGTGGAACAGTGTCATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TLAGSLAGQPWTAVASMGPVRWM*WNSVME Trigger: TTCCATGACACTGTTCCAGCACATCCACCGGACAGG...CCCCATGGAGGCCACTGCCGTCCATGGCTGCCCAGCCAGAGAGCCTGCCAGGGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | AAACCCGGGCAGGGTGCTCCAGGGGGCCTGACCTGGCGGTGCCACACTGCACCCGCTGGAACAGTGTCATaGAAAAGGCCATTCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KPGQGAPGGLTWRCHTAPAGTVS*KRPFPG Trigger: TCCTGGGAATGGCCTTTTCCATGACACTGTTCCAGC...GGGTGCAGTGTGGCACCGCCAGGTCAGGCCCCCTGGAGCACCCTGCCCGGGTTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR TCA 90 bp | AAGCATGCCCTGCTGATGTGGCTCCCTGGTTCAGGCAGCATCCTCTCACCCCAGTGGTGCCGATGGCGATaGCGAGGTTGGCTGCGGACA | + |
|
Preference number: 4 (lower is better) Translates to: KHALLMWLPGSGSILSPQWCRWR*RGWLRT Trigger: TGTCCGCAGCCAACCTCGTCATCGCCATCGGCACCA...CTGGGGTGAGAGGATGCTGCCTGAACCAGGGAGCCACATCAGCAGGGCATGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | CTGCACCCTGGCAGGCTCTCTGGCTGGGCAGCCATGGACGGCAGTGGCCTCCATCCCTCTTTCAGGTCCTaGTTGGCATTCTCGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: LHPGRLSGWAAMDGSGLHPSFRS*LAFSFT Trigger: GGTGAACGAGAATGCCAAGCAGGACCTGAAAGAGGG...ATGGAGGCCACTGCCGTCCATGGCTGCCCAGCCAGAGAGCCTGCCAGGGTGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCCCTCCATGAGGTCTAAGGCCAAGGATGTGGGCAGGGGAGGGCAGGCCTGCACATGCCCACGGTaGCTAGCACGTGCTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: PLPSMRSKAKDVGRGGQACTCPR*LARACC Trigger: ACAACAAGCACGTGCTAGGCACCGTGGGCATGTGCA...GGCCTGCCCTCCCCTGCCCACATCCTTGGCCTTAGACCTCATGGAGGGCAGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGCACACGCAGTGTCCGGGTGAGCTGGGGGAGAAGGTaGCGAAGTTGCCTTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: QAGDMTRVLFPGTRSVRVSWGRR*RSCLGT Trigger: TGTCCCAAGGCAACTTCGCCACCTTCTCCCCCAGCT...CACCCGGACACTGCGTGTGCCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | AAACCCGGGCAGGGTGCTCCAGGGGGCCTGACCTGGCGGTGCCACACTGCACCCTTTTTACCTGTCCGGTaGATGTGCTGGAACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: KPGQGAPGGLTWRCHTAPFLPVR*MCWNSV Trigger: GACACTGTTCCAGCACATCCACCGGACAGGTAAAAA...GGGTGCAGTGTGGCACCGCCAGGTCAGGCCCCCTGGAGCACCCTGCCCGGGTTT 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | CCTCTGCCCTCCATGAGGTCTAAGGCCAAGGATGTGGGCAGGGGAGGGCAGGCCCCCTCTTTCAGGTCCTaGTTGGCATTCTCGTTCACC | + |
|
Preference number: 4 (lower is better) Translates to: PLPSMRSKAKDVGRGGQAPSFRS*LAFSFT Trigger: GGTGAACGAGAATGCCAAGCAGGACCTGAAAGAGGG...GGCCTGCCCTCCCCTGCCCACATCCTTGGCCTTAGACCTCATGGAGGGCAGAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | CTTTCCCCTCAGCAGGGCAGTAAGCAACTGAGTGAGTCTGGTGGGGTCTGCCTCAGGGGGTGGTGCTGTTaGGCCCACAGCCCTGGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LSPQQGSKQLSESGGVCLRGWCC*AHSPGN Trigger: ATTCCCAGGGCTGTGGGCGCAACAGCACCACCCCCT...GAGGCAGACCCCACCAGACTCACTCAGTTGCTTACTGCCCTGCTGAGGGGAAAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGTGGCCATCGGAGAGCAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGTGCACATGCCCACGGTaGCTAGCACGTGCTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QGGHRRAGRRHDSGPLPWCTCPR*LARACC Trigger: ACAACAAGCACGTGCTAGGCACCGTGGGCATGTGCA...CCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTGCTCTCCGATGGCCACCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | GGACGGCAGTGGCCTCCATGGGGCAGACTCTCCACCCCACATAGGAACAAGTGTTTCTCCACAAGGGGGTaGTGCTGTTGCGCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRQWPPWGRLSTPHRNKCFSTRG*CCCAHS Trigger: GCTGTGGGCGCAACAGCACCACCCCCTTGTGGAGAA...ACACTTGTTCCTATGTGGGGTGGAGAGTCTGCCCCATGGAGGCCACTGCCGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGTGGCCATCGGAGAGCAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGAGTCTGTGTAGTCAGTaGCCCCACAACACCGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: QGGHRRAGRRHDSGPLPWSLCSQ*PHNTAS Trigger: AGATGCGGTGTTGTGGGGTCACTGACTACACAGACT...CCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTGCTCTCCGATGGCCACCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | ACACCCTGCCCGCCCCGGCATCTTTGGCAAGTCTGCAGGTGCAGGAATCCAGTTACACAGAGAGCCAGATaGCCACTCCAAGCAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TPCPPRHLWQVCRCRNPVTQRAR*PLQAAH Trigger: GTGGGCTGCTTGGAGTGGGCATCTGGCTCTCTGTGT...AACTGGATTCCTGCACCTGCAGACTTGCCAAAGATGCCGGGGCGGGCAGGGTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | ACCCTGGCAGGCTCTCTGGCTGGGCAGCCATGGACGGCAGTGGCCTCCATGGGGGATCAGAATCAACTCTaGCAGCAGGATGATCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: TLAGSLAGQPWTAVASMGDQNQL*QQDDQQ Trigger: CTGTTGATCATCCTGCTGGCAGAGTTGATTCTGATC...CCCCATGGAGGCCACTGCCGTCCATGGCTGCCCAGCCAGAGAGCCTGCCAGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | CAGGGTGGCCATCGGAGAGCAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGCCTGTCCGGTGGATGTaGTGGAACAGTGTCATGGAA | + |
|
Preference number: 4 (lower is better) Translates to: QGGHRRAGRRHDSGPLPWPVRWM*WNSVME Trigger: TTCCATGACACTGTTCCAGCACATCCACCGGACAGG...CCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTGCTCTCCGATGGCCACCCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | CACCCCAGAGTAGCATGGCCCATGCTGTGTATGCCACCAGCCTCTTCTGGCCTTTTCTCCACAAGGGGGTaGTGCTGTTGCGCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: HPRVAWPMLCMPPASSGLFSTRG*CCCAHS Trigger: GCTGTGGGCGCAACAGCACCACCCCCTTGTGGAGAA...AAGGCCAGAAGAGGCTGGTGGCATACACAGCATGGGCCATGCTACTCTGGGGTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR TCA 90 bp | CTCCATGGGGCAGACTCTCCACCCCACATAGGAACAAGTGTCAGTGTGAGGAAGGGAAGCCCGTCACCATaGCGATGGTGCCGATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: LHGADSPPHIGTSVSVRKGSPSP*RWCRWR Trigger: TCGCCATCGGCACCATCGTCATGGTGACGGGCTTCC...CTTCCTCACACTGACACTTGTTCCTATGTGGGGTGGAGAGTCTGCCCCATGGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGCACACGCAGTGTCCGGGTGCCTGGGAATTCTCCATaGAGCATCTGTCAGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: QAGDMTRVLFPGTRSVRVPGNSP*SICQEL Trigger: CAGTTCCTGACAGATGCTGCATGGAGAATTCCCAGG...CACCCGGACACTGCGTGTGCCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | GAATGCCCACTCAGGAAGGTGAGGCCAGAATGCCACCATCATGGAGGAGGGGAGCACCGCATCTCGGCCTaGATGATGTTCCAGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ECPLRKVRPECHHHGGGEHRISA*MMFQAF Trigger: GAACGCCTGGAACATCATCCAGGCCGAGATGCGGTG...CTCCCCTCCTCCATGATGGTGGCATTCTGGCCTCACCTTCCTGAGTGGGCATTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | AGACATGACTCGGGTCCTCTTCCCTGGCACACGCAGTGTCCGGGTGGAGCCAGGGTCCGGTGGATGTGCTaGAACAGTGTCATGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: RHDSGPLPWHTQCPGGARVRWMC*NSVMEK Trigger: CTTTTCCATGACACTGTTCCAGCACATCCACCGGAC...CCTGGCTCCACCCGGACACTGCGTGTGCCAGGGAAGAGGACCCGAGTCATGTCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | CCTCTGCCCTCCATGAGGTCTAAGGCCAAGGATGTGGGCAGGGGAGGGCAGGCCTTTTTACCTGTCCGGTaGATGTGCTGGAACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: PLPSMRSKAKDVGRGGQAFLPVR*MCWNSV Trigger: GACACTGTTCCAGCACATCCACCGGACAGGTAAAAA...GGCCTGCCCTCCCCTGCCCACATCCTTGGCCTTAGACCTCATGGAGGGCAGAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | AACATGTCTGCTTCCACTCTCCGGATCAGGGTGAGGAGAGCGGGGTCTGAACCAACACAGAGAGCCAGATaGCCACTCCAAGCAGCCCAC | + |
|
Preference number: 4 (lower is better) Translates to: NMSASTLRIRVRRAGSEPTQRAR*PLQAAH Trigger: GTGGGCTGCTTGGAGTGGGCATCTGGCTCTCTGTGT...TGGTTCAGACCCCGCTCTCCTCACCCTGATCCGGAGAGTGGAAGCAGACATGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | CAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGCACACGCAGTGTCCGGGTGCTTTCAGGTCCTGCTTaGCATTCTCGTTCACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: QAGDMTRVLFPGTRSVRVLSGPA*HSRSPC Trigger: ACAAGGTGAACGAGAATGCCAAGCAGGACCTGAAAG...CACCCGGACACTGCGTGTGCCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | GGAGAGCAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGCACACGCAGTGTCGCTGGAACAGTGTCATaGAAAAGGCCATTCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GEQAGDMTRVLFPGTRSVAGTVS*KRPFPG Trigger: TCCTGGGAATGGCCTTTTCCATGACACTGTTCCAGC...GACACTGCGTGTGCCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTGCTCTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | GGCCATCGGAGAGCAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGCACACGTTTTTACCTGTCCGGTaGATGTGCTGGAACAGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GHRRAGRRHDSGPLPWHTFLPVR*MCWNSV Trigger: GACACTGTTCCAGCACATCCACCGGACAGGTAAAAA...CGTGTGCCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTGCTCTCCGATGGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | CAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGCACACGCAGTGTCCGGGTGGATCAGAATCAACTCTaGCAGCAGGATGATCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: QAGDMTRVLFPGTRSVRVDQNQL*QQDDQQ Trigger: CTGTTGATCATCCTGCTGGCAGAGTTGATTCTGATC...CACCCGGACACTGCGTGTGCCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | ACAATGTGCCAGCGCAGAGTACAGAGGCGCAAGGAGACCTGCACCAGACACCTGCCTGGGAATTCTCCATaGAGCATCTGTCAGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: TMCQRRVQRRKETCTRHLPGNSP*SICQEL Trigger: CAGTTCCTGACAGATGCTGCATGGAGAATTCCCAGG...CAGGTGTCTGGTGCAGGTCTCCTTGCGCCTCTGTACTCTGCGCTGGCACATTGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | CCACAGTGTTCTGACTGCCACTCCTCCCGGCAAAGCGTTTCACTGTCCCCTGACGCCATTCCCAGGATCTaGATGATGAGGATGCACATG | + |
|
Preference number: 4 (lower is better) Translates to: PQCSDCHSSRQSVSLSPDAIPRI*MMRMHM Trigger: CATGTGCATCCTCATCATGCAGATCCTGGGAATGGC...GTCAGGGGACAGTGAAACGCTTTGCCGGGAGGAGTGGCAGTCAGAACACTGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | ACCAAGGGACAGCAAGGCAAGTGGAGGCCCAAAGGCCTCTCCCCTCAGAATGCCCTTTCAGGTCCTGCTTaGCATTCTCGTTCACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: TKGQQGKWRPKGLSPQNALSGPA*HSRSPC Trigger: ACAAGGTGAACGAGAATGCCAAGCAGGACCTGAAAG...GGCATTCTGAGGGGAGAGGCCTTTGGGCCTCCACTTGCCTTGCTGTCCCTTGGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | TTCTCCCCAATGCTGTGGGGGCAGTGGAAGCCTGACTTCTCAGAGTTTCTGTATTTCTCCACAAGGGGGTaGTGCTGTTGCGCCCACAGC | + |
|
Preference number: 4 (lower is better) Translates to: FSPMLWGQWKPDFSEFLYFSTRG*CCCAHS Trigger: GCTGTGGGCGCAACAGCACCACCCCCTTGTGGAGAA...ATACAGAAACTCTGAGAAGTCAGGCTTCCACTGCCCCCACAGCATTGGGGAGAA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR TCA 90 bp | GGCCATCGGAGAGCAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGCACACGGCCAGAATATCAAATTaGAGAGGAACATCGTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: GHRRAGRRHDSGPLPWHTARISN*RGTSCT Trigger: AGTACACGATGTTCCTCTTCAATTTGATATTCTGGC...CGTGTGCCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTGCTCTCCGATGGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR TCA 90 bp | CAGGGTGGCCATCGGAGAGCAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGGCCAGAATATCAAATTaGAGAGGAACATCGTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: QGGHRRAGRRHDSGPLPWARISN*RGTSCT Trigger: AGTACACGATGTTCCTCTTCAATTTGATATTCTGGC...CCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTGCTCTCCGATGGCCACCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR TCA 90 bp | GTGAGGAGAGCGGGGTCTGAACCAGAGGAATTTGCAGCAGCAGGAATGTGTGAGAGTCTGTGTAGTCAGTaGCCCCACAACACCGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: VRRAGSEPEEFAAAGMCESLCSQ*PHNTAS Trigger: AGATGCGGTGTTGTGGGGTCACTGACTACACAGACT...CTCACACATTCCTGCTGCTGCAAATTCCTCTGGTTCAGACCCCGCTCTCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCTCCCTTCCTGGGTTGTCCTGAGACTCTGTTTCAGTCTGGGCAGAGGAACCCTGGGAATTCTCCATaGAGCATCTGTCAGGAACTG | + |
|
Preference number: 4 (lower is better) Translates to: LPPFLGCPETLFQSGQRNPGNSP*SICQEL Trigger: CAGTTCCTGACAGATGCTGCATGGAGAATTCCCAGG...GTTCCTCTGCCCAGACTGAAACAGAGTCTCAGGACAACCCAGGAAGGGAGGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR GCA 90 bp | ATCTGGATCCCAGATAGGTGCTCAGTCAGTTCCACAGGCCCCTGTCTTTACGGATGCACATGCCCACGGTaGCTAGCACGTGCTTGTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IWIPDRCSVSSTGPCLYGCTCPR*LARACC Trigger: ACAACAAGCACGTGCTAGGCACCGTGGGCATGTGCA...TCCGTAAAGACAGGGGCCTGTGGAACTGACTGAGCACCTATCTGGGATCCAGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | TTGGGTATCAGTGTTGGCAAGACTGCTTGGCCTAGCACTGGGCATCTAACAAGGCACCGCATCTCGGCCTaGATGATGTTCCAGGCGTTC | + |
|
Preference number: 4 (lower is better) Translates to: LGISVGKTAWPSTGHLTRHRISA*MMFQAF Trigger: GAACGCCTGGAACATCATCCAGGCCGAGATGCGGTG...CCTTGTTAGATGCCCAGTGCTAGGCCAAGCAGTCTTGCCAACACTGATACCCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | GGTTGGATGTCATTGCTAGACCAGAGAACACCTGGCCTGGTGGGAAACAGCGTATTGCGCCCACAGCCCTaGGAATTCTCCATGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GWMSLLDQRTPGLVGNSVLRPQP*EFSMQH Trigger: ATGCTGCATGGAGAATTCCCAGGGCTGTGGGCGCAA...TACGCTGTTTCCCACCAGGCCAGGTGTTCTCTGGTCTAGCAATGACATCCAACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGATAGGTGCTCAGTCAGTTCCACAGGCCCCTGTCTTTACGGAAGGACATTGCGCCCACAGCCCTaGGAATTCTCCATGCAGCAT | + |
|
Preference number: 4 (lower is better) Translates to: IPDRCSVSSTGPCLYGRTLRPQP*EFSMQH Trigger: ATGCTGCATGGAGAATTCCCAGGGCTGTGGGCGCAA...TGTCCTTCCGTAAAGACAGGGGCCTGTGGAACTGACTGAGCACCTATCTGGGAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR TCA 90 bp | TTCCTTGAGGTCACCTGCAAACCAAGAGGACTTTCTGAGTCAGGTCTGCAAATTGGAAGCCCGTCACCATaGCGATGGTGCCGATGGCGA | + |
|
Preference number: 4 (lower is better) Translates to: FLEVTCKPRGLSESGLQIGSPSP*RWCRWR Trigger: TCGCCATCGGCACCATCGTCATGGTGACGGGCTTCC...AATTTGCAGACCTGACTCAGAAAGTCCTCTTGGTTTGCAGGTGACCTCAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| CDS-3UTR TCA 90 bp | TTGGGTATCAGTGTTGGCAAGACTGCTTGGCCTAGCACTGGGCATCTAACAAGGTGTTCCAGGCGTTCTTaGGCCCCACGTTGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: LGISVGKTAWPSTGHLTRCSRRS*APRCSL Trigger: CAGAGAACAACGTGGGGCTCAAGAACGCCTGGAACA...CCTTGTTAGATGCCCAGTGCTAGGCCAAGCAGTCTTGCCAACACTGATACCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR TCA 90 bp | GGTTGGATGTCATTGCTAGACCAGAGAACACCTGGCCTGGTGGGAAACAGCGTAAGTCTGTGTAGTCAGTaGCCCCACAACACCGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: GWMSLLDQRTPGLVGNSVSLCSQ*PHNTAS Trigger: AGATGCGGTGTTGTGGGGTCACTGACTACACAGACT...TACGCTGTTTCCCACCAGGCCAGGTGTTCTCTGGTCTAGCAATGACATCCAACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | GAGAACACCTGGCCTGGTGGGAAACAGCGTAAAGAGCCAAATAGCACGAGAAAAAGCTGGGGGAGAAGGTaGCGAAGTTGCCTTGGGACA | + |
|
Preference number: 4 (lower is better) Translates to: ENTWPGGKQRKEPNSTRKSWGRR*RSCLGT Trigger: TGTCCCAAGGCAACTTCGCCACCTTCTCCCCCAGCT...TTTTCTCGTGCTATTTGGCTCTTTACGCTGTTTCCCACCAGGCCAGGTGTTCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| 3UTR CAA 72 bp | TGTGGAGAAATGCCAGAGGCTGCGCCAGGCATTTCCTaGAGGTCACCTGCAAACCAAGAGGACTTTCTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: CGEMPEAAPGIS*RSPANQEDFLS Trigger: ACTCAGAAAGTCCTCTTGGTTTGCAGGTGACCTCAAGGAAATGCCTGGCGCAGCCTCTGGCATTTCTCCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| CDS-3UTR TCA 90 bp | GACAAGGCATTGCAAGCAGAAAGTGCATTCGAAACCAATAGCGTGCACTCCTGGTGTTCCAGGCGTTCTTaGGCCCCACGTTGTTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: DKALQAESAFETNSVHSWCSRRS*APRCSL Trigger: CAGAGAACAACGTGGGGCTCAAGAACGCCTGGAACA...CCAGGAGTGCACGCTATTGGTTTCGAATGCACTTTCTGCTTGCAATGCCTTGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | GACAAGGCATTGCAAGCAGAAAGTGCATTCGAAACCAATAGCGTGCACTCCTGGGTGGCGAAGTTGCCTTaGGACACAGAGAGCCAGATG | + |
|
Preference number: 4 (lower is better) Translates to: DKALQAESAFETNSVHSWVAKLP*DTESQM Trigger: CATCTGGCTCTCTGTGTCCCAAGGCAACTTCGCCAC...CCAGGAGTGCACGCTATTGGTTTCGAATGCACTTTCTGCTTGCAATGCCTTGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | ATCCCAGATAGGTGCTCAGTCAGTTCCACAGGCCCCTGTCTTTACGGAAGGACAGCTGGAACAGTGTCATaGAAAAGGCCATTCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IPDRCSVSSTGPCLYGRTAGTVS*KRPFPG Trigger: TCCTGGGAATGGCCTTTTCCATGACACTGTTCCAGC...TGTCCTTCCGTAAAGACAGGGGCCTGTGGAACTGACTGAGCACCTATCTGGGAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | ATCTGGATCCCAGATAGGTGCTCAGTCAGTTCCACAGGCCCCTGTCTTTACGGACTTTCAGGTCCTGCTTaGCATTCTCGTTCACCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: IWIPDRCSVSSTGPCLYGLSGPA*HSRSPC Trigger: ACAAGGTGAACGAGAATGCCAAGCAGGACCTGAAAG...TCCGTAAAGACAGGGGCCTGTGGAACTGACTGAGCACCTATCTGGGATCCAGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
||
| CDS-3UTR CCA 90 bp | TCATTGCTAGACCAGAGAACACCTGGCCTGGTGGGAAACAGCGTAAAGAGCCAAGTCCGGTGGATGTGCTaGAACAGTGTCATGGAAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLLDQRTPGLVGNSVKSQVRWMC*NSVMEK Trigger: CTTTTCCATGACACTGTTCCAGCACATCCACCGGAC...TTGGCTCTTTACGCTGTTTCCCACCAGGCCAGGTGTTCTCTGGTCTAGCAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR CAA 72 bp | GGCAGTGGAAGCCTGACTTCTCAGAGTTTCTGTATCTaGTCTTTGAGGTTACATGGGCTACAGTGTCTGCCC | + |
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Preference number: 4 (lower is better) Translates to: GSGSLTSQSFCI*SLRLHGLQCLP Trigger: GGGCAGACACTGTAGCCCATGTAACCTCAAAGACAAGATACAGAAACTCTGAGAAGTCAGGCTTCCACTGCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| 3UTR CAA 72 bp | GCAAACCAAGAGGACTTTCTGAGTCAGGTCTGCAAATaGCTTGTGTGGTACCTGAAGGAAACGGCTCTGCCT | + |
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Preference number: 4 (lower is better) Translates to: ANQEDFLSQVCK*LVWYLKETALP Trigger: AGGCAGAGCCGTTTCCTTCAGGTACCACACAAGCAATTTGCAGACCTGACTCAGAAAGTCCTCTTGGTTTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR CAA 72 bp | AGCGGGACCTGGGATGAAGGAAATGCAGACAAGGCATaGCAAGCAGAAAGTGCATTCGAAACCAATAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: SGTWDEGNADKA*QAESAFETNSV Trigger: CACGCTATTGGTTTCGAATGCACTTTCTGCTTGCAATGCCTTGTCTGCATTTCCTTCATCCCAGGTCCCGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| CDS-3UTR GCA 90 bp | TTCCTTGAGGTCACCTGCAAACCAAGAGGACTTTCTGAGTCAGGTCTGCAAATTCCCTCTTTCAGGTCCTaGTTGGCATTCTCGTTCACC | + |
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Preference number: 4 (lower is better) Translates to: FLEVTCKPRGLSESGLQIPSFRS*LAFSFT Trigger: GGTGAACGAGAATGCCAAGCAGGACCTGAAAGAGGG...AATTTGCAGACCTGACTCAGAAAGTCCTCTTGGTTTGCAGGTGACCTCAAGGAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR CAA 72 bp | TACCCATCCACACTCATAATGCAGCAGGCGCCATGCTaGCTTTCTGTTTGTTTCTACCTGAACTCTGCACCT | + |
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Preference number: 4 (lower is better) Translates to: YPSTLIMQQAPC*LSVCFYLNSAP Trigger: AGGTGCAGAGTTCAGGTAGAAACAAACAGAAAGCAAGCATGGCGCCTGCTGCATTATGAGTGTGGATGGGTA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| 3UTR CAA 72 bp | CTTGCTTTCTGTTTGTTTCTACCTGAACTCTGCACCTaGGGGGAAGATAGCTGTCATTCCTCCAATAACACC | + |
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Preference number: 4 (lower is better) Translates to: LAFCLFLPELCT*GEDSCHSSNNT Trigger: GGTGTTATTGGAGGAATGACAGCTATCTTCCCCCAAGGTGCAGAGTTCAGGTAGAAACAAACAGAAAGCAAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000112173.8 |
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| CDS TCA 90 bp | GGCTCTGACCCCGCGAACCCGCGGTGCCGTAGAAGGCGCCAGCCGTaGAGCCGCGGCCGAACGGGCGGCCAGAGGTGGACGGCTTGGCAA | + |
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Preference number: 5 (lower is better) Translates to: GSDPANPRCRRRRQP*SRGRTGGQRWTAWQ Trigger: TTGCCAAGCCGTCCACCTCTGGCCGCCCGTTCGGCCGCGGCTTCACGGCTGGCGCCTTCTACGGCACCGCGGGTTCGCGGGGTCAGAGCC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000123786.9 |
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| CDS-3UTR CAA 90 bp | CCTCTGCCCTCCATGAGGTCTAAGGCCAAGGATGTGGGCAGGGGAGGGCAGGCCGAGAAGGTGGCGAAGTaGCCTTGGGACACAGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: PLPSMRSKAKDVGRGGQAEKVAK*PWDTES Trigger: GCTCTCTGTGTCCCAAGGCAACTTCGCCACCTTCTC...GGCCTGCCCTCCCCTGCCCACATCCTTGGCCTTAGACCTCATGGAGGGCAGAGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS-3UTR CAA 90 bp | GCCATGGACGGCAGTGGCCTCCATGGGGCAGACTCTCCACCCCACATAGGAACAGAGAAGGTGGCGAAGTaGCCTTGGGACACAGAGAGC | + |
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Preference number: 5 (lower is better) Translates to: AMDGSGLHGADSPPHIGTEKVAK*PWDTES Trigger: GCTCTCTGTGTCCCAAGGCAACTTCGCCACCTTCTC...TGTTCCTATGTGGGGTGGAGAGTCTGCCCCATGGAGGCCACTGCCGTCCATGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS GCA 90 bp | ACAAGGGGGTGGTGCTGTTGCGCCCACAGCCCTGGGAATTCTCCATaGAGCATCTGTCAGGAACTGTGTTCTCCCCGAGCACCGGATACC | + |
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Preference number: 5 (lower is better) Translates to: TRGWCCCAHSPGNSP*SICQELCSPRAPDT Trigger: GGTATCCGGTGCTCGGGGAGAACACAGTTCCTGACAGATGCTGCATGGAGAATTCCCAGGGCTGTGGGCGCAACAGCACCACCCCCTTGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS GCA 90 bp | CGAACGGGCGGCCAGAGGTGGACGGCTTGGCAAAGTCCGAGTCCTTaGTGTCCAAAGATGGACTCCGGTGGATCGAAGAATCCTCGCTAC | + |
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Preference number: 5 (lower is better) Translates to: RTGGQRWTAWQSPSP*CPKMDSGGSKNPRY Trigger: GTAGCGAGGATTCTTCGATCCACCGGAGTCCATCTTTGGACAGCAAGGACTCGGACTTTGCCAAGCCGTCCACCTCTGGCCGCCCGTTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123786.9 |
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| CDS-3UTR CAA 90 bp | CAGGCCTGGCAGGGCCCCGTATCATGGCCTCACCCTCTCCCTCAAGGTGAGTCCCCTAGCACGTGCTTGTaGTCATCAAACCACAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QAWQGPVSWPHPLPQGESPSTCL*SSNHSF Trigger: GAAGCTGTGGTTTGATGACAACAAGCACGTGCTAGG...GGACTCACCTTGAGGGAGAGGGTGAGGCCATGATACGGGGCCCTGCCAGGCCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS-3UTR CAA 90 bp | GGGTGCTCCAGGGGGCCTGACCTGGCGGTGCCACACTGCACCCTGGCAGGCTCTAGCCAGAATATCAAATaGAAGAGGAACATCGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GCSRGPDLAVPHCTLAGSSQNIK*KRNIVY Trigger: GTACACGATGTTCCTCTTCAATTTGATATTCTGGCT...AGAGCCTGCCAGGGTGCAGTGTGGCACCGCCAGGTCAGGCCCCCTGGAGCACCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS-3UTR CAA 90 bp | GCCATGGACGGCAGTGGCCTCCATGGGGCAGACTCTCCACCCCACATAGGAACAATGTTCCAGGCGTTCTaGAGCCCCACGTTGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: AMDGSGLHGADSPPHIGTMFQAF*SPTLFS Trigger: AGAGAACAACGTGGGGCTCAAGAACGCCTGGAACAT...TGTTCCTATGTGGGGTGGAGAGTCTGCCCCATGGAGGCCACTGCCGTCCATGGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS-3UTR CAA 90 bp | CAGGCAGGAGACATGACTCGGGTCCTCTTCCCTGGCACACGCAGTGTCCGGGTGCCTAGCACGTGCTTGTaGTCATCAAACCACAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: QAGDMTRVLFPGTRSVRVPSTCL*SSNHSF Trigger: GAAGCTGTGGTTTGATGACAACAAGCACGTGCTAGG...CACCCGGACACTGCGTGTGCCAGGGAAGAGGACCCGAGTCATGTCTCCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS CCA 90 bp | ACCACAGCTTCACTTTTTCGTAGCAGCCCGTTCTCCACAAGGGGGTaGTGCTGTTGCGCCCACAGCCCTGGGAATTCTCCATGCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TTASLFRSSPFSTRG*CCCAHSPGNSPCSI Trigger: GATGCTGCATGGAGAATTCCCAGGGCTGTGGGCGCAACAGCACCACCCCCTTGTGGAGAACGGGCTGCTACGAAAAAGTGAAGCTGTGGT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS-3UTR CAA 90 bp | GACACCCTGCCCGCCCCGGCATCTTTGGCAAGTCTGCAGGTGCAGGAATCCAGTCCTAGCACGTGCTTGTaGTCATCAAACCACAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: DTLPAPASLASLQVQESSPSTCL*SSNHSF Trigger: GAAGCTGTGGTTTGATGACAACAAGCACGTGCTAGG...ACTGGATTCCTGCACCTGCAGACTTGCCAAAGATGCCGGGGCGGGCAGGGTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS GCA 90 bp | ACAGCTTCACTTTTTCGTAGCAGCCCGTTCTCCACAAGGGGGTGGTaGTGTTGCGCCCACAGCCCTGGGAATTCTCCATGCAGCATCTGT | + |
|
Preference number: 5 (lower is better) Translates to: TASLFRSSPFSTRGW*CCAHSPGNSPCSIC Trigger: ACAGATGCTGCATGGAGAATTCCCAGGGCTGTGGGCGCAACAGCACCACCCCCTTGTGGAGAACGGGCTGCTACGAAAAAGTGAAGCTGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS-3UTR CAA 90 bp | CTGCACCCTGGCAGGCTCTCTGGCTGGGCAGCCATGGACGGCAGTGGCCTCCATAGCCAGAATATCAAATaGAAGAGGAACATCGTGTAC | + |
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Preference number: 5 (lower is better) Translates to: LHPGRLSGWAAMDGSGLHSQNIK*KRNIVY Trigger: GTACACGATGTTCCTCTTCAATTTGATATTCTGGCT...ATGGAGGCCACTGCCGTCCATGGCTGCCCAGCCAGAGAGCCTGCCAGGGTGCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS-3UTR CAA 90 bp | ACACCCTGCCCGCCCCGGCATCTTTGGCAAGTCTGCAGGTGCAGGAATCCAGTTTCTTTCAGGTCCTGCTaGGCATTCTCGTTCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: TPCPPRHLWQVCRCRNPVSFRSC*AFSFTL Trigger: CAAGGTGAACGAGAATGCCAAGCAGGACCTGAAAGA...AACTGGATTCCTGCACCTGCAGACTTGCCAAAGATGCCGGGGCGGGCAGGGTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS-3UTR CAA 90 bp | GCCCCGGCATCTTTGGCAAGTCTGCAGGTGCAGGAATCCAGTTGCCCAAGCCCTTCTTTCAGGTCCTGCTaGGCATTCTCGTTCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: APASLASLQVQESSCPSPSFRSC*AFSFTL Trigger: CAAGGTGAACGAGAATGCCAAGCAGGACCTGAAAGA...AGGGCTTGGGCAACTGGATTCCTGCACCTGCAGACTTGCCAAAGATGCCGGGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS-3UTR CAA 90 bp | TGCTGTGTATGCCACCAGCCTCTTCTGGCCTTCATCCATGGTCTCCAGGCCTGGATGTTCCAGGCGTTCTaGAGCCCCACGTTGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: CCVCHQPLLAFIHGLQAWMFQAF*SPTLFS Trigger: AGAGAACAACGTGGGGCTCAAGAACGCCTGGAACAT...CCAGGCCTGGAGACCATGGATGAAGGCCAGAAGAGGCTGGTGGCATACACAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS CCA 90 bp | AGAGGTGGACGGCTTGGCAAAGTCCGAGTCCTTGCTGTCCAAAGATaGACTCCGGTGGATCGAAGAATCCTCGCTACTCGACTTCTCCAT | + |
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Preference number: 5 (lower is better) Translates to: RGGRLGKVRVLAVQR*TPVDRRILATRLLH Trigger: ATGGAGAAGTCGAGTAGCGAGGATTCTTCGATCCACCGGAGTCCATCTTTGGACAGCAAGGACTCGGACTTTGCCAAGCCGTCCACCTCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123786.9 |
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| CDS-3UTR CAA 90 bp | CTCCATGGGGCAGACTCTCCACCCCACATAGGAACAAGTGTCAGTGTGAGGAAGATGTTCCAGGCGTTCTaGAGCCCCACGTTGTTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LHGADSPPHIGTSVSVRKMFQAF*SPTLFS Trigger: AGAGAACAACGTGGGGCTCAAGAACGCCTGGAACAT...CTTCCTCACACTGACACTTGTTCCTATGTGGGGTGGAGAGTCTGCCCCATGGAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS-3UTR CAA 90 bp | CTCCATGGGGCAGACTCTCCACCCCACATAGGAACAAGTGTCAGTGTGAGGAAGTCTTTCAGGTCCTGCTaGGCATTCTCGTTCACCTTG | + |
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Preference number: 5 (lower is better) Translates to: LHGADSPPHIGTSVSVRKSFRSC*AFSFTL Trigger: CAAGGTGAACGAGAATGCCAAGCAGGACCTGAAAGA...CTTCCTCACACTGACACTTGTTCCTATGTGGGGTGGAGAGTCTGCCCCATGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS-3UTR CAA 90 bp | GGACGGCAGTGGCCTCCATGGGGCAGACTCTCCACCCCACATAGGAACAAGTGTAGCCAGAATATCAAATaGAAGAGGAACATCGTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: GRQWPPWGRLSTPHRNKCSQNIK*KRNIVY Trigger: GTACACGATGTTCCTCTTCAATTTGATATTCTGGCT...ACACTTGTTCCTATGTGGGGTGGAGAGTCTGCCCCATGGAGGCCACTGCCGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS TCA 72 bp | CCCGCGAACCCGCGGTGCCGTAGAAGGCGCCAGCCGTaGAGCCGCGGCCGAACGGGCGGCCAGAGGTGGACG | + |
|
Preference number: 6 (lower is better) Translates to: PANPRCRRRRQP*SRGRTGGQRWT Trigger: CGTCCACCTCTGGCCGCCCGTTCGGCCGCGGCTTCACGGCTGGCGCCTTCTACGGCACCGCGGGTTCGCGGG 76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123786.9 |
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| CDS CAA 90 bp | CCAGCCGTGAAGCCGCGGCCGAACGGGCGGCCAGAGGTGGACGGCTaGGCAAAGTCCGAGTCCTTGCTGTCCAAAGATGGACTCCGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PAVKPRPNGRPEVDG*AKSESLLSKDGLRW Trigger: CCACCGGAGTCCATCTTTGGACAGCAAGGACTCGGACTTTGCCAAGCCGTCCACCTCTGGCCGCCCGTTCGGCCGCGGCTTCACGGCTGG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123786.9 |
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| CDS CCA 72 bp | AGCCGCGGCCGAACGGGCGGCCAGAGGTGGACGGCTTaGCAAAGTCCGAGTCCTTGCTGTCCAAAGATGGAC | + |
|
Preference number: 6 (lower is better) Translates to: SRGRTGGQRWTA*QSPSPCCPKMD Trigger: GTCCATCTTTGGACAGCAAGGACTCGGACTTTGCCAAGCCGTCCACCTCTGGCCGCCCGTTCGGCCGCGGCT 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123786.9 |
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| CDS CAA 72 bp | AAGCCGCGGCCGAACGGGCGGCCAGAGGTGGACGGCTaGGCAAAGTCCGAGTCCTTGCTGTCCAAAGATGGA | + |
|
Preference number: 6 (lower is better) Translates to: KPRPNGRPEVDG*AKSESLLSKDG Trigger: TCCATCTTTGGACAGCAAGGACTCGGACTTTGCCAAGCCGTCCACCTCTGGCCGCCCGTTCGGCCGCGGCTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123786.9 |
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| CDS CAA 90 bp | CCGAACGGGCGGCCAGAGGTGGACGGCTTGGCAAAGTCCGAGTCCTaGCTGTCCAAAGATGGACTCCGGTGGATCGAAGAATCCTCGCTA | + |
|
Preference number: 6 (lower is better) Translates to: PNGRPEVDGLAKSES*LSKDGLRWIEESSL Trigger: TAGCGAGGATTCTTCGATCCACCGGAGTCCATCTTTGGACAGCAAGGACTCGGACTTTGCCAAGCCGTCCACCTCTGGCCGCCCGTTCGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123786.9 |
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| CDS GCA 72 bp | TGGTGCTGTTGCGCCCACAGCCCTGGGAATTCTCCATaGAGCATCTGTCAGGAACTGTGTTCTCCCCGAGCA | + |
|
Preference number: 6 (lower is better) Translates to: WCCCAHSPGNSP*SICQELCSPRA Trigger: TGCTCGGGGAGAACACAGTTCCTGACAGATGCTGCATGGAGAATTCCCAGGGCTGTGGGCGCAACAGCACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS CCA 72 bp | TCACTTTTTCGTAGCAGCCCGTTCTCCACAAGGGGGTaGTGCTGTTGCGCCCACAGCCCTGGGAATTCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: SLFRSSPFSTRG*CCCAHSPGNSP Trigger: TGGAGAATTCCCAGGGCTGTGGGCGCAACAGCACCACCCCCTTGTGGAGAACGGGCTGCTACGAAAAAGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS CAA 72 bp | CGGCCAGAGGTGGACGGCTTGGCAAAGTCCGAGTCCTaGCTGTCCAAAGATGGACTCCGGTGGATCGAAGAA | + |
|
Preference number: 6 (lower is better) Translates to: RPEVDGLAKSES*LSKDGLRWIEE Trigger: TTCTTCGATCCACCGGAGTCCATCTTTGGACAGCAAGGACTCGGACTTTGCCAAGCCGTCCACCTCTGGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123786.9 |
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| CDS GCA 72 bp | GGCCAGAGGTGGACGGCTTGGCAAAGTCCGAGTCCTTaGTGTCCAAAGATGGACTCCGGTGGATCGAAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GQRWTAWQSPSP*CPKMDSGGSKN Trigger: ATTCTTCGATCCACCGGAGTCCATCTTTGGACAGCAAGGACTCGGACTTTGCCAAGCCGTCCACCTCTGGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123786.9 |
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| CDS CCA 72 bp | CGGCTTGGCAAAGTCCGAGTCCTTGCTGTCCAAAGATaGACTCCGGTGGATCGAAGAATCCTCGCTACTCGA | + |
|
Preference number: 6 (lower is better) Translates to: RLGKVRVLAVQR*TPVDRRILATR Trigger: TCGAGTAGCGAGGATTCTTCGATCCACCGGAGTCCATCTTTGGACAGCAAGGACTCGGACTTTGCCAAGCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123786.9 |
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| CDS GCA 72 bp | TGGAACAGTGTCATGGAAAAGGCCATTCCCAGGATCTaGATGATGAGGATGCACATGCCCACGGTGCCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: WNSVMEKAIPRI*MMRMHMPTVPS Trigger: GCTAGGCACCGTGGGCATGTGCATCCTCATCATGCAGATCCTGGGAATGGCCTTTTCCATGACACTGTTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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| CDS CCA 72 bp | TGTTGTAGAGCAGCAGCCCCTCTTTCAGGTCCTGCTTaGCATTCTCGTTCACCTTGTCCATGTAGACGAAGA | + |
|
Preference number: 6 (lower is better) Translates to: CCRAAAPLSGPA*HSRSPCPCRRR Trigger: TCTTCGTCTACATGGACAAGGTGAACGAGAATGCCAAGCAGGACCTGAAAGAGGGGCTGCTGCTCTACAACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 6 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 ENSMUST00000123786.9 ENSMUST00000154375.8 ENSMUST00000202372.4 |
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| CDS GCA 72 bp | ATGATGAGGATGCACATGCCCACGGTGCCTAGCACGTaGTTGTTGTCATCAAACCACAGCTTCACTTTTTCG | + |
|
Preference number: 6 (lower is better) Translates to: MMRMHMPTVPST*LLSSNHSFTFS Trigger: CGAAAAAGTGAAGCTGTGGTTTGATGACAACAAGCACGTGCTAGGCACCGTGGGCATGTGCATCCTCATCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000032503.12 ENSMUST00000112171.8 ENSMUST00000112173.8 |
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