Pregenerated sensors for TSPAN7 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000058254Ensembl transcript IDs: ENSMUST00000076354.13, ENSMUST00000115526.2
Found 152 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGCTGGCGCTCACAGGGCCTTAGGGTGGGCTTCACTATGACTAGCTaGAGGGGGCCTGGCTACACTGTGGGGCACAACAGGGCTTCACAA | + |
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Preference number: 1 (lower is better) Translates to: SWRSQGLRVGFTMTS*RGPGYTVGHNRASQ Trigger: TTGTGAAGCCCTGTTGTGCCCCACAGTGTAGCCAGGCCCCCTGCAGCTAGTCATAGTGAAGCCCACCCTAAGGCCCTGTGAGCGCCAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| 3UTR CCA 90 bp | GGATATGAGGTTTCTACAAGTGGGCAACGCCACCAGGCAGTTCAGTaGCTCAGTGGCTCGGCAATCTTCCTGCCCACTTCAAGGGGAGTC | + |
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Preference number: 1 (lower is better) Translates to: GYEVSTSGQRHQAVQ*LSGSAIFLPTSRGV Trigger: GACTCCCCTTGAAGTGGGCAGGAAGATTGCCGAGCCACTGAGCCACTGAACTGCCTGGTGGCGTTGCCCACTTGTAGAAACCTCATATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR TCA 90 bp | GCAGAGGTAAGAATCATGTTGCTAGCCTACCTCATCACCCTCGCGTaGTCCGTGAGGGACTTGTGGCCATTGGTGCCTGCTCTGTTGCTT | + |
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Preference number: 1 (lower is better) Translates to: AEVRIMLLAYLITLA*SVRDLWPLVPALLL Trigger: AAGCAACAGAGCAGGCACCAATGGCCACAAGTCCCTCACGGATCACGCGAGGGTGATGAGGTAGGCTAGCAACATGATTCTTACCTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR CCA 90 bp | GTGATCCGTGAGGGACTTGTGGCCATTGGTGCCTGCTCTGTTGCTTaGGAACACCTGCACAGTGTTCACCTACCTCTTTACTCACCTTGC | + |
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Preference number: 1 (lower is better) Translates to: VIREGLVAIGACSVA*EHLHSVHLPLYSPC Trigger: GCAAGGTGAGTAAAGAGGTAGGTGAACACTGTGCAGGTGTTCCCAAGCAACAGAGCAGGCACCAATGGCCACAAGTCCCTCACGGATCAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR TCA 90 bp | TTTCCCCAATGGCATCCACTCCACCTCTTCCCCAACATACGGATATaGGGTTTCTACAAGTGGGCAACGCCACCAGGCAGTTCAGTGGCT | + |
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Preference number: 1 (lower is better) Translates to: FPQWHPLHLFPNIRI*GFYKWATPPGSSVA Trigger: AGCCACTGAACTGCCTGGTGGCGTTGCCCACTTGTAGAAACCTCATATCCGTATGTTGGGGAAGAGGTGGAGTGGATGCCATTGGGGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR GCA 90 bp | AGGGACTTGTGGCCATTGGTGCCTGCTCTGTTGCTTGGGAACACCTaGACAGTGTTCACCTACCTCTTTACTCACCTTGCAGGCTCCAAT | + |
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Preference number: 1 (lower is better) Translates to: RDLWPLVPALLLGNT*TVFTYLFTHLAGSN Trigger: ATTGGAGCCTGCAAGGTGAGTAAAGAGGTAGGTGAACACTGTGCAGGTGTTCCCAAGCAACAGAGCAGGCACCAATGGCCACAAGTCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR TCA 90 bp | AACCCTCCCTACTCCCACTCACCTTCTCTTTACACCATCTCATACTaGTTGGCAGTGATGAACCGGGACAGACAGCAAGCCAGCAGCATG | + |
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Preference number: 1 (lower is better) Translates to: NPPYSHSPSLYTISY*LAVMNRDRQQASSM Trigger: CATGCTGCTGGCTTGCTGTCTGTCCCGGTTCATCACTGCCAATCAGTATGAGATGGTGTAAAGAGAAGGTGAGTGGGAGTAGGGAGGGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR GCA 90 bp | CAGCAACCACATGGTGGCTCACAACCATCTGTAATGGGGATCCGATaGCCTCTTCTGGTGTGTCTGAAGACAGCCACAGTACTCACATTC | + |
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Preference number: 1 (lower is better) Translates to: QQPHGGSQPSVMGIR*PLLVCLKTATVLTF Trigger: GAATGTGAGTACTGTGGCTGTCTTCAGACACACCAGAAGAGGGCATCGGATCCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR GCA 90 bp | GAACAAGGAAGCCAGCTAATGCTTAACAGCACTTTCTGCCATGCCTaGCAGACGCTGTTTTCTCCTTATGAATCCCTCCCACTGTGTCTC | + |
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Preference number: 1 (lower is better) Translates to: EQGSQLMLNSTFCHA*QTLFSPYESLPLCL Trigger: GAGACACAGTGGGAGGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGTTAAGCATTAGCTGGCTTCCTTGTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| 3UTR CCA 90 bp | GTGTGTGGGGAGAGGGCAAGAAGATGGAAAGTAGATGAAGAAAAGTaGAAGGAAGAAAGGGACACCGTGAGGGAGGAAGAGAGAGAAGCA | + |
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Preference number: 1 (lower is better) Translates to: VCGERARRWKVDEEK*KEERDTVREEEREA Trigger: TGCTTCTCTCTCTTCCTCCCTCACGGTGTCCCTTTCTTCCTTCCACTTTTCTTCATCTACTTTCCATCTTCTTGCCCTCTCCCCACACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR GCA 90 bp | AGGAAGAGAGAGAAGCAGGGAAGATGGCATTCATTCAGTAGAGCCTaGTACATTCTAGGAGAGCCACGGCAGACCACTTTCATTCACATC | + |
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Preference number: 1 (lower is better) Translates to: RKREKQGRWHSFSRA*YILGEPRQTTFIHI Trigger: GATGTGAATGAAAGTGGTCTGCCGTGGCTCTCCTAGAATGTAGCAGGCTCTACTGAATGAATGCCATCTTCCCTGCTTCTCTCTCTTCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR CCA 90 bp | ACAAAAACTCCTCTCAGTTTGTCCCACCACTTCCATAGAGTATCTTaGCTCCTAACCTTCTTAACGCCTTGGATTAGCCTGTGGCGCAGG | + |
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Preference number: 1 (lower is better) Translates to: TKTPLSLSHHFHRVS*LLTFLTPWISLWRR Trigger: CCTGCGCCACAGGCTAATCCAAGGCGTTAAGAAGGTTAGGAGCCAAGATACTCTATGGAAGTGGTGGGACAAACTGAGAGGAGTTTTTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR GCA 90 bp | TGGAACAATGAACAAGGAAGCCAGCTAATGCTTAACAGCACTTTCTaGCATGCCTGCCAGACGCTGTTTTCTCCTTATGAATCCCTCCCA | + |
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Preference number: 1 (lower is better) Translates to: WNNEQGSQLMLNSTF*HACQTLFSPYESLP Trigger: TGGGAGGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGTTAAGCATTAGCTGGCTTCCTTGTTCATTGTTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| 3UTR GCA 90 bp | CTTCCCAGAGACTACCCATCCCATCCTTATCCTCTCCTCTCTTCTTaGCCATGTTCCCTCTTGAAGATGGTAACTATCAAAATCGTAGGG | + |
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Preference number: 1 (lower is better) Translates to: LPRDYPSHPYPLLSS*PCSLLKMVTIKIVG Trigger: CCCTACGATTTTGATAGTTACCATCTTCAAGAGGGAACATGGGCAAGAAGAGAGGAGAGGATAAGGATGGGATGGGTAGTCTCTGGGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR CCA 90 bp | CTAGTAAAGAATTACTGGCACAGAAGAAATCATCCTATCAGATTCTaGGCCCTAAGGAATGTCATGGAAGGGGGTGGGAGGCCAAGAGGT | + |
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Preference number: 1 (lower is better) Translates to: LVKNYWHRRNHPIRF*ALRNVMEGGGRPRG Trigger: ACCTCTTGGCCTCCCACCCCCTTCCATGACATTCCTTAGGGCCCAGAATCTGATAGGATGATTTCTTCTGTGCCAGTAATTCTTTACTAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR GCA 90 bp | AAGAGAAAGAGAAGACATGTGAGGGATTCACCATTGCTAACAGCCTaGCCCAAAAGGTTTAAGGTGAAGAGCAAGTGTTCCCACTTTCCC | + |
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Preference number: 1 (lower is better) Translates to: KRKRRHVRDSPLLTA*PKRFKVKSKCSHFP Trigger: GGGAAAGTGGGAACACTTGCTCTTCACCTTAAACCTTTTGGGGCAGGCTGTTAGCAATGGTGAATCCCTCACATGTCTTCTCTTTCTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR CCA 90 bp | GAGAGGTGCTCAGTGGTAAACTTGAGTCCAGAGACCATCTTCTTTTaGCTAATGGTGCCTTTAAGAAACTGGCTATGGGGTACTAGAGAG | + |
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Preference number: 1 (lower is better) Translates to: ERCSVVNLSPETIFF*LMVPLRNWLWGTRE Trigger: CTCTCTAGTACCCCATAGCCAGTTTCTTAAAGGCACCATTAGCCAAAAGAAGATGGTCTCTGGACTCAAGTTTACCACTGAGCACCTCTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR CCA 90 bp | AGAACACAGCAGAACTGCATTCGCATTGCTGAGCAGAACAACAGATaGGGAGGGAGAGAGTTAGACTTTGAGATGGTCTCTATAGAAATG | + |
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Preference number: 1 (lower is better) Translates to: RTQQNCIRIAEQNNR*GGRELDFEMVSIEM Trigger: CATTTCTATAGAGACCATCTCAAAGTCTAACTCTCTCCCTCCCCATCTGTTGTTCTGCTCAGCAATGCGAATGCAGTTCTGCTGTGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR CCA 90 bp | GAGACCATCTTCTTTTGGCTAATGGTGCCTTTAAGAAACTGGCTATaGGGTACTAGAGAGATGGCTCAGAGGCTTAAAGCACTGACTTCT | + |
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Preference number: 1 (lower is better) Translates to: ETIFFWLMVPLRNWL*GTREMAQRLKALTS Trigger: AGAAGTCAGTGCTTTAAGCCTCTGAGCCATCTCTCTAGTACCCCATAGCCAGTTTCTTAAAGGCACCATTAGCCAAAAGAAGATGGTCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR TCA 90 bp | GAGAAAGTTCAGGGCAGTAAGTGCCTTTCAAATGTCTCTGGAGACTaGGTTAATTGCCCTGCTTGTGATCCGATTAGAGTTTGTCTGTGT | + |
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Preference number: 1 (lower is better) Translates to: EKVQGSKCLSNVSGD*VNCPACDPIRVCLC Trigger: ACACAGACAAACTCTAATCGGATCACAAGCAGGGCAATTAACTCAGTCTCCAGAGACATTTGAAAGGCACTTACTGCCCTGAACTTTCTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR CCA 90 bp | GAGAAAGGGGAAACAGGCCCCTTTAAGGTTCTAGTAAAGAATTACTaGCACAGAAGAAATCATCCTATCAGATTCTGGGCCCTAAGGAAT | + |
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Preference number: 1 (lower is better) Translates to: EKGETGPFKVLVKNY*HRRNHPIRFWALRN Trigger: ATTCCTTAGGGCCCAGAATCTGATAGGATGATTTCTTCTGTGCCAGTAATTCTTTACTAGAACCTTAAAGGGGCCTGTTTCCCCTTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR TCA 90 bp | GTCCCTAGGCCATTACATTACAGAGATGTTGCTAAGTATTATTACTaGAGTGTTGAAGCAATTGGGAGAAAGTTCAGGGCAGTAAGTGCC | + |
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Preference number: 1 (lower is better) Translates to: VPRPLHYRDVAKYYY*SVEAIGRKFRAVSA Trigger: GGCACTTACTGCCCTGAACTTTCTCCCAATTGCTTCAACACTTCAGTAATAATACTTAGCAACATCTCTGTAATGTAATGGCCTAGGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR TCA 90 bp | CAGATTCAAACAAGGGCTCTAAGCCAAATTACCTATGGGACATGGTaGGTCAAAGAAAACTGGACTCAGCATATTTTGCCTTGCACCTTT | + |
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Preference number: 1 (lower is better) Translates to: QIQTRALSQITYGTW*VKENWTQHILPCTF Trigger: AAAGGTGCAAGGCAAAATATGCTGAGTCCAGTTTTCTTTGACTCACCATGTCCCATAGGTAATTTGGCTTAGAGCCCTTGTTTGAATCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR CCA 90 bp | ACTGCAACACAAGACATACTCATAGTGACTGACTTCACATGCTCTTaGGAGATGCCATGTCACACAAGTTTTGATAATTACATGGAAGAA | + |
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Preference number: 1 (lower is better) Translates to: TATQDILIVTDFTCS*EMPCHTSFDNYMEE Trigger: TTCTTCCATGTAATTATCAAAACTTGTGTGACATGGCATCTCCCAAGAGCATGTGAAGTCAGTCACTATGAGTATGTCTTGTGTTGCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR TCA 90 bp | AAGTGTCAACCATGCTTCCATATTTCTGTTTTTAACAGCCTGTATTaGGGAAACTGTGTGCTCAAGGCTGTTGTGTGTATCCTAAACATT | + |
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Preference number: 1 (lower is better) Translates to: KCQPCFHISVFNSLY*GNCVLKAVVCILNI Trigger: AATGTTTAGGATACACACAACAGCCTTGAGCACACAGTTTCCTCAATACAGGCTGTTAAAAACAGAAATATGGAAGCATGGTTGACACTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR TCA 90 bp | TCAGGACTGAAGAATAAATCAGATTTGAATTATGGGATCAAAGTTTaGGCTAGTCTAAGTACTGGTATGGGACCAAGAGGAAGTTCTGAA | + |
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Preference number: 1 (lower is better) Translates to: SGLKNKSDLNYGIKV*ASLSTGMGPRGSSE Trigger: TTCAGAACTTCCTCTTGGTCCCATACCAGTACTTAGACTAGCTCAAACTTTGATCCCATAATTCAAATCTGATTTATTCTTCAGTCCTGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR TCA 90 bp | AGCTATCCCCTGCTTTCAACTCTAGAAATACTTGAAATTAAGCTTTaGTACATACCAACTGCATCTATCTACCAACACAAAGAGTTGTCC | + |
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Preference number: 1 (lower is better) Translates to: SYPLLSTLEILEIKL*YIPTASIYQHKELS Trigger: GGACAACTCTTTGTGTTGGTAGATAGATGCAGTTGGTATGTATCAAAGCTTAATTTCAAGTATTTCTAGAGTTGAAAGCAGGGGATAGCT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR GCA 90 bp | TTTAAAACTGCAACACAAGACATACTCATAGTGACTGACTTCACATaGTCTTGGGAGATGCCATGTCACACAAGTTTTGATAATTACATG | + |
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Preference number: 1 (lower is better) Translates to: FKTATQDILIVTDFT*SWEMPCHTSFDNYM Trigger: CATGTAATTATCAAAACTTGTGTGACATGGCATCTCCCAAGAGCATGTGAAGTCAGTCACTATGAGTATGTCTTGTGTTGCAGTTTTAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR CCA 90 bp | AAGGCTAGATATATTTGGCAGATTTTTCAACATAGTATGATACTCTaGTTATACTTGGCGGGCAGAATAGTGGTTCTTTCCTTGAGACAA | + |
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Preference number: 1 (lower is better) Translates to: KARYIWQIFQHSMIL*LYLAGRIVVLSLRQ Trigger: TTGTCTCAAGGAAAGAACCACTATTCTGCCCGCCAAGTATAACCAGAGTATCATACTATGTTGAAAAATCTGCCAAATATATCTAGCCTT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCAACGCCACCAGGCAGTTCAGTGGCTCAGTGGCTCGGCAATCTTCCTGCCGGGTGGGCTTCACTATaGCTAGCTGCAGGGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: WATPPGSSVAQWLGNLPAGWASL*LAAGGL Trigger: CAGGCCCCCTGCAGCTAGTCATAGTGAAGCCCACCC...GGCAGGAAGATTGCCGAGCCACTGAGCCACTGAACTGCCTGGTGGCGTTGCCCA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGCAACGCCACCAGGCAGTTCAGTGGCTCAGTGGCTCGGCAATCTTCCTGCCTGGTGCCTGCTCTGTTaGTTGGGAACACCTGCACAG | + |
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Preference number: 2 (lower is better) Translates to: WATPPGSSVAQWLGNLPAWCLLC*LGTPAQ Trigger: CTGTGCAGGTGTTCCCAAGCAACAGAGCAGGCACCA...GGCAGGAAGATTGCCGAGCCACTGAGCCACTGAACTGCCTGGTGGCGTTGCCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR-3UTR CCA 90 bp | CACTGTGGGGCACAACAGGGCTTCACAAGATGGACACTACGTATGACGTGGGCTACCAGGGTGGGAGGCTaGGCGAGGCTAGACTCAGCA | + |
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Preference number: 2 (lower is better) Translates to: HCGAQQGFTRWTLRMTWATRVGG*ARLDSA Trigger: TGCTGAGTCTAGCCTCGCCCAGCCTCCCACCCTGGT...AGCCCACGTCATACGTAGTGTCCATCTTGTGAAGCCCTGTTGTGCCCCACAGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGTCTCCTCTCCCGTGCTTGACAGCCTGAAGAAGGTAGGAAAGAATCCAGGGGGGTGGGCTTCACTATaGCTAGCTGCAGGGGGCCTG | + |
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Preference number: 2 (lower is better) Translates to: CVSSPVLDSLKKVGKNPGGWASL*LAAGGL Trigger: CAGGCCCCCTGCAGCTAGTCATAGTGAAGCCCACCC...CCCTGGATTCTTTCCTACCTTCTTCAGGCTGTCAAGCACGGGAGAGGAGACACA 58% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| 3UTR-3UTR GCA 90 bp | ACAGCACTTTCTGCCATGCCTGCCAGACGCTGTTTTCTCCTTATGAATCCCTCCGCCTCCCCTACTACATaGAGGGCCACAGGGGCCAGT | + |
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Preference number: 2 (lower is better) Translates to: TALSAMPARRCFLLMNPSASPTT*RATGAS Trigger: ACTGGCCCCTGTGGCCCTGCATGTAGTAGGGGAGGC...GGAGGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCCTTAGGGTGGGCTTCACTATGACTAGCTGCAGGGGGCCTGGCTACACTAGGCAGAGCTTTGACTaGGTAGGAGTGTCAGTTGCA | + |
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Preference number: 2 (lower is better) Translates to: QGLRVGFTMTSCRGPGYTRQSFD*VGVSVA Trigger: TGCAACTGACACTCCTACCCAGTCAAAGCTCTGCCT...AGTGTAGCCAGGCCCCCTGCAGCTAGTCATAGTGAAGCCCACCCTAAGGCCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| 3UTR-3UTR TCA 90 bp | TCCCACTGTGTCTCCTCTCCCGTGCTTGACAGCCTGAAGAAGGTAGGAAAGAATACCACAGTGAGGGGCTaGCTGAAGCCTCCCCTACTA | + |
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Preference number: 2 (lower is better) Translates to: SHCVSSPVLDSLKKVGKNTTVRG*LKPPLL Trigger: TAGTAGGGGAGGCTTCAGTCAGCCCCTCACTGTGGT...ATTCTTTCCTACCTTCTTCAGGCTGTCAAGCACGGGAGAGGAGACACAGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| 3UTR-3UTR TCA 90 bp | TGGGCAACGCCACCAGGCAGTTCAGTGGCTCAGTGGCTCGGCAATCTTCCTGCCCACTCACTTTTAAATTaGTCTGATGAGGTCCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: WATPPGSSVAQWLGNLPAHSLLN*SDEVLN Trigger: GTTGAGGACCTCATCAGATCAATTTAAAAGTGAGTG...GGCAGGAAGATTGCCGAGCCACTGAGCCACTGAACTGCCTGGTGGCGTTGCCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCGTGAGGGACTTGTGGCCATTGGTGCCTGCTCTGTTGCTTGGGAACACCTGAATGTCTCTGGAGACTaGGTTAATTGCCCTGCTTGT | + |
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Preference number: 2 (lower is better) Translates to: IREGLVAIGACSVAWEHLNVSGD*VNCPAC Trigger: ACAAGCAGGGCAATTAACTCAGTCTCCAGAGACATT...CAGGTGTTCCCAAGCAACAGAGCAGGCACCAATGGCCACAAGTCCCTCACGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGCAACGCCACCAGGCAGTTCAGTGGCTCAGTGGCTCGGCAATCTTCCTGCCTGTGAAGAAGCAAGATaGTTTACTGGAGATAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: WATPPGSSVAQWLGNLPACEEAR*FTGDSH Trigger: ATGACTATCTCCAGTAAAGCATCTTGCTTCTTCACA...GGCAGGAAGATTGCCGAGCCACTGAGCCACTGAACTGCCTGGTGGCGTTGCCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGGCCTTAGGGTGGGCTTCACTATGACTAGCTGCAGGGGGCCTGGCTACACTTGCTCTAACGTTCTTTaGAAGTCTTTCAGAGATTGC | + |
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Preference number: 2 (lower is better) Translates to: QGLRVGFTMTSCRGPGYTCSNVL*KSFRDC Trigger: GCAATCTCTGAAAGACTTCCAAAGAACGTTAGAGCA...AGTGTAGCCAGGCCCCCTGCAGCTAGTCATAGTGAAGCCCACCCTAAGGCCCTG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCTCAAGGCTGTTGTGTGTATCCTAAACATTTGTATGAGTCACAGGGTGTGGTGGACCAAGTACATGTaGGGGAGCTGGCGCTCACAG | + |
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Preference number: 2 (lower is better) Translates to: VLKAVVCILNICMSHRVWWTKYM*GSWRSQ Trigger: CTGTGAGCGCCAGCTCCCTCACATGTACTTGGTCCA...CCACACCCTGTGACTCATACAAATGTTTAGGATACACACAACAGCCTTGAGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR-3UTR GCA 90 bp | TGGGCAACGCCACCAGGCAGTTCAGTGGCTCAGTGGCTCGGCAATCTTCCTGCCTTTAATACTAAATCCTaGTTGACAGAGACACACACT | + |
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Preference number: 2 (lower is better) Translates to: WATPPGSSVAQWLGNLPAFNTKS*LTETHT Trigger: AGTGTGTGTCTCTGTCAAGCAGGATTTAGTATTAAA...GGCAGGAAGATTGCCGAGCCACTGAGCCACTGAACTGCCTGGTGGCGTTGCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGAAACAGGTCTGGTGGCTCAGGGAGTGGGAACGCCTCAAATTGAGTTTAGCGAGAAGCAGGGAAGATaGCATTCATTCAGTAGAGCC | + |
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Preference number: 2 (lower is better) Translates to: GETGLVAQGVGTPQIEFSEKQGR*HSFSRA Trigger: GGCTCTACTGAATGAATGCCATCTTCCCTGCTTCTC...GCTAAACTCAATTTGAGGCGTTCCCACTCCCTGAGCCACCAGACCTGTTTCACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| 3UTR CAA 90 bp | AAGATAATTACCATCGGCATATCTACGGAAAGGTGTGTGGCATTCTaGGACCACAGTGAGGGGCTGACTGAAGCCTCCCCTACTACATGC | + |
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Preference number: 2 (lower is better) Translates to: KIITIGISTERCVAF*DHSEGLTEASPTTC Trigger: GCATGTAGTAGGGGAGGCTTCAGTCAGCCCCTCACTGTGGTCCAAGAATGCCACACACCTTTCCGTAGATATGCCGATGGTAATTATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| 3UTR-3UTR GCA 90 bp | TTAACAGCACTTTCTGCCATGCCTGCCAGACGCTGTTTTCTCCTTATGAATCCCTTCACTATGACTAGCTaGAGGGGGCCTGGCTACACT | + |
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Preference number: 2 (lower is better) Translates to: LTALSAMPARRCFLLMNPFTMTS*RGPGYT Trigger: AGTGTAGCCAGGCCCCCTGCAGCTAGTCATAGTGAA...GGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGTTAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGAAACAGGTCTGGTGGCTCAGGGAGTGGGAACGCCTCAAATTGAGTTTAGCTCCACACCCATCTCTTaGAACAATGAACAAGGAAGC | + |
|
Preference number: 2 (lower is better) Translates to: GETGLVAQGVGTPQIEFSSTPIS*NNEQGS Trigger: GCTTCCTTGTTCATTGTTCCAAGAGATGGGTGTGGA...GCTAAACTCAATTTGAGGCGTTCCCACTCCCTGAGCCACCAGACCTGTTTCACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR TCA 90 bp | GAAAAGATAATTACCATCGGCATATCTACGGAAAGGTGTGTGGCATTCTTGGACTGGACCAAGTACATGTaGGGGAGCTGGCGCTCACAG | + |
|
Preference number: 2 (lower is better) Translates to: EKIITIGISTERCVAFLDWTKYM*GSWRSQ Trigger: CTGTGAGCGCCAGCTCCCTCACATGTACTTGGTCCA...GTCCAAGAATGCCACACACCTTTCCGTAGATATGCCGATGGTAATTATCTTTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR-3UTR CCA 90 bp | GCCAGTGAAGATGTGATAACCAGTCACCTACAGTTGGACCAAGTACATGTGAGGCAGGGCTTCACAAGATaGACACTACGTATGACGTGG | + |
|
Preference number: 2 (lower is better) Translates to: ASEDVITSHLQLDQVHVRQGFTR*TLRMTW Trigger: CCACGTCATACGTAGTGTCCATCTTGTGAAGCCCTG...CCTCACATGTACTTGGTCCAACTGTAGGTGACTGGTTATCACATCTTCACTGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR-3UTR CCA 90 bp | AATTACTGGCACAGAAGAAATCATCCTATCAGATTCTGGGCCCTAAGGAATGTCCCCACTCCCACTTCTTaGCTCTGGCGTTCCCCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: NYWHRRNHPIRFWALRNVPTPTS*LWRSPV Trigger: TACAGGGGAACGCCAGAGCCAAGAAGTGGGAGTGGG...GACATTCCTTAGGGCCCAGAATCTGATAGGATGATTTCTTCTGTGCCAGTAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTCTGTCACTCCATGCCACAAAATACACATTGTCATACACTTACGCGGAGTGGGCTGTTTTCTCCTTATaGATCCCTCCCACTGTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: PLSLHATKYTLSYTYAEWAVFSL*IPPTVS Trigger: AGACACAGTGGGAGGGATTCATAAGGAGAAAACAGC...CCACTCCGCGTAAGTGTATGACAATGTGTATTTTGTGGCATGGAGTGACAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTCTGTCACTCCATGCCACAAAATACACATTGTCATACACTTACGCGGAGTGGATCAAAATCGTAGGGTaGAACAGGTCTGGTGGCTCA | + |
|
Preference number: 2 (lower is better) Translates to: PLSLHATKYTLSYTYAEWIKIVG*NRSGGS Trigger: TGAGCCACCAGACCTGTTTCACCCTACGATTTTGAT...CCACTCCGCGTAAGTGTATGACAATGTGTATTTTGTGGCATGGAGTGACAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAACAGCACTTTCTGCCATGCCTGCCAGACGCTGTTTTCTCCTTATGAATCCCACACTACGTATGACGTaGGCTGAAAGGCAGAGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: LTALSAMPARRCFLLMNPTLRMT*AERQSF Trigger: AAAGCTCTGCCTTTCAGCCCACGTCATACGTAGTGT...GGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGTTAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR-3UTR TCA 90 bp | GGTGAAACAGGTCTGGTGGCTCAGGGAGTGGGAACGCCTCAAATTGAGTTTAGCGCTAAGTATTATTACTaGAGTGTTGAAGCAATTGGG | + |
|
Preference number: 2 (lower is better) Translates to: GETGLVAQGVGTPQIEFSAKYYY*SVEAIG Trigger: CCCAATTGCTTCAACACTTCAGTAATAATACTTAGC...GCTAAACTCAATTTGAGGCGTTCCCACTCCCTGAGCCACCAGACCTGTTTCACC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR TCA 90 bp | CCTCTGTCACTCCATGCCACAAAATACACATTGTCATACACTTACGCGGAGTGGACCTATGGGACATGGTaGGTCAAAGAAAACTGGACT | + |
|
Preference number: 2 (lower is better) Translates to: PLSLHATKYTLSYTYAEWTYGTW*VKENWT Trigger: AGTCCAGTTTTCTTTGACTCACCATGTCCCATAGGT...CCACTCCGCGTAAGTGTATGACAATGTGTATTTTGTGGCATGGAGTGACAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR GCA 90 bp | AATTACTGGCACAGAAGAAATCATCCTATCAGATTCTGGGCCCTAAGGAATGTCACTTTCTGCCATGCCTaGCAGACGCTGTTTTCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: NYWHRRNHPIRFWALRNVTFCHA*QTLFSP Trigger: AGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGT...GACATTCCTTAGGGCCCAGAATCTGATAGGATGATTTCTTCTGTGCCAGTAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR CCA 90 bp | TTAACAGCACTTTCTGCCATGCCTGCCAGACGCTGTTTTCTCCTTATGAATCCCTGCTCTAACGTTCTTTaGAAGTCTTTCAGAGATTGC | + |
|
Preference number: 2 (lower is better) Translates to: LTALSAMPARRCFLLMNPCSNVL*KSFRDC Trigger: GCAATCTCTGAAAGACTTCCAAAGAACGTTAGAGCA...GGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGTTAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR-3UTR GCA 90 bp | TTAACAGCACTTTCTGCCATGCCTGCCAGACGCTGTTTTCTCCTTATGAATCCCAAGTCTTTCAGAGATTaGGGCAGTTCCTTTTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: LTALSAMPARRCFLLMNPKSFRD*GSSFLK Trigger: TTTTAAAAAGGAACTGCCGCAATCTCTGAAAGACTT...GGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGTTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGAATCTATCCCCTGATCTAAGCAAGGGCCACATAAATAATAACCTACTAAACAGGAGCAAGAATCCTTaGCTTCCTCTATCCACCTTT | + |
|
Preference number: 2 (lower is better) Translates to: KNLSPDLSKGHINNNLLNRSKNP*LPLSTF Trigger: AAAGGTGGATAGAGGAAGGCAAGGATTCTTGCTCCT...GTTTAGTAGGTTATTATTTATGTGGCCCTTGCTTAGATCAGGGGATAGATTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR GCA 90 bp | AAGAATCTATCCCCTGATCTAAGCAAGGGCCACATAAATAATAACCTACTAAACAAGTCTTTCAGAGATTaGGGCAGTTCCTTTTTAAAA | + |
|
Preference number: 2 (lower is better) Translates to: KNLSPDLSKGHINNNLLNKSFRD*GSSFLK Trigger: TTTTAAAAAGGAACTGCCGCAATCTCTGAAAGACTT...GTTTAGTAGGTTATTATTTATGTGGCCCTTGCTTAGATCAGGGGATAGATTCTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR GCA 72 bp | TCACAGGGCCTTAGGGTGGGCTTCACTATGACTAGCTaGAGGGGGCCTGGCTACACTGTGGGGCACAACAGG | + |
|
Preference number: 3 (lower is better) Translates to: SQGLRVGFTMTS*RGPGYTVGHNR Trigger: CCTGTTGTGCCCCACAGTGTAGCCAGGCCCCCTGCAGCTAGTCATAGTGAAGCCCACCCTAAGGCCCTGTGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR CCA 72 bp | AAGTGGGCAACGCCACCAGGCAGTTCAGTGGCTCAGTaGCTCGGCAATCTTCCTGCCCACTTCAAGGGGAGT | + |
|
Preference number: 3 (lower is better) Translates to: KWATPPGSSVAQ*LGNLPAHFKGS Trigger: ACTCCCCTTGAAGTGGGCAGGAAGATTGCCGAGCCACTGAGCCACTGAACTGCCTGGTGGCGTTGCCCACTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR CAA 90 bp | ATCCGTGAGGGACTTGTGGCCATTGGTGCCTGCTCTGTTGCTTGGGAACACCTGAGGTGTGTGGCATTCTaGGACCACAGTGAGGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: IREGLVAIGACSVAWEHLRCVAF*DHSEGL Trigger: CAGCCCCTCACTGTGGTCCAAGAATGCCACACACCT...CAGGTGTTCCCAAGCAACAGAGCAGGCACCAATGGCCACAAGTCCCTCACGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR TCA 72 bp | AAAGGTGTGTGGCATTCTTGGACCACAGTGAGGGGCTaGCTGAAGCCTCCCCTACTACATGCAGGGCCACAG | + |
|
Preference number: 3 (lower is better) Translates to: KGVWHSWTTVRG*LKPPLLHAGPQ Trigger: CTGTGGCCCTGCATGTAGTAGGGGAGGCTTCAGTCAGCCCCTCACTGTGGTCCAAGAATGCCACACACCTTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR CCA 72 bp | GTTTCTACAAGTGGGCAACGCCACCAGGCAGTTCAGTaGCTCAGTGGCTCGGCAATCTTCCTGCCCACTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VSTSGQRHQAVQ*LSGSAIFLPTS Trigger: TGAAGTGGGCAGGAAGATTGCCGAGCCACTGAGCCACTGAACTGCCTGGTGGCGTTGCCCACTTGTAGAAAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR TCA 72 bp | AGCCTCCCCTACTACATGCAGGGCCACAGGGGCCAGTaGAGATGTGATAACCAGTCACCTACAGTTGGACCA | + |
|
Preference number: 3 (lower is better) Translates to: SLPYYMQGHRGQ*RCDNQSPTVGP Trigger: TGGTCCAACTGTAGGTGACTGGTTATCACATCTTCACTGGCCCCTGTGGCCCTGCATGTAGTAGGGGAGGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR CCA 72 bp | TGGCTACACTGTGGGGCACAACAGGGCTTCACAAGATaGACACTACGTATGACGTGGGCTGAAAGGCAGAGC | + |
|
Preference number: 3 (lower is better) Translates to: WLHCGAQQGFTR*TLRMTWAERQS Trigger: GCTCTGCCTTTCAGCCCACGTCATACGTAGTGTCCATCTTGTGAAGCCCTGTTGTGCCCCACAGTGTAGCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR-3UTR CAA 90 bp | ACAGCACTTTCTGCCATGCCTGCCAGACGCTGTTTTCTCCTTATGAATCCCTCCAGGTGTGTGGCATTCTaGGACCACAGTGAGGGGCTG | + |
|
Preference number: 3 (lower is better) Translates to: TALSAMPARRCFLLMNPSRCVAF*DHSEGL Trigger: CAGCCCCTCACTGTGGTCCAAGAATGCCACACACCT...GGAGGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGGCCTGGCTACACTGTGGGGCACAACAGGGCTTCACAAGATGGACACTACAAGGAGCAAGAATCCTaGCCTTCCTCTATCCACCTT | + |
|
Preference number: 3 (lower is better) Translates to: RGPGYTVGHNRASQDGHYKEQES*PSSIHL Trigger: AAGGTGGATAGAGGAAGGCAAGGATTCTTGCTCCTT...GTAGTGTCCATCTTGTGAAGCCCTGTTGTGCCCCACAGTGTAGCCAGGCCCCCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCAACGCCACCAGGCAGTTCAGTGGCTCAGTGGCTCGGCAATCTTCCTGCCTGGACTCAGCATATTTaGCCTTGCACCTTTATACTG | + |
|
Preference number: 3 (lower is better) Translates to: WATPPGSSVAQWLGNLPAWTQHI*PCTFIL Trigger: CAGTATAAAGGTGCAAGGCAAAATATGCTGAGTCCA...GGCAGGAAGATTGCCGAGCCACTGAGCCACTGAACTGCCTGGTGGCGTTGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR CAA 90 bp | TGGGCAACGCCACCAGGCAGTTCAGTGGCTCAGTGGCTCGGCAATCTTCCTGCCTGCCCATGTTCCCTCTaGAAGATGGTAACTATCAAA | + |
|
Preference number: 3 (lower is better) Translates to: WATPPGSSVAQWLGNLPACPCSL*KMVTIK Trigger: TTTGATAGTTACCATCTTCAAGAGGGAACATGGGCA...GGCAGGAAGATTGCCGAGCCACTGAGCCACTGAACTGCCTGGTGGCGTTGCCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR TCA 72 bp | TTTCTGCCATGCCTGCCAGACGCTGTTTTCTCCTTATaGATCCCTCCCACTGTGTCTCCTCTCCCGTGCTTG | + |
|
Preference number: 3 (lower is better) Translates to: FLPCLPDAVFSL*IPPTVSPLPCL Trigger: CAAGCACGGGAGAGGAGACACAGTGGGAGGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR CCA 72 bp | GAGGGACTTGTGGCCATTGGTGCCTGCTCTGTTGCTTaGGAACACCTGCACAGTGTTCACCTACCTCTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: EGLVAIGACSVA*EHLHSVHLPLY Trigger: GTAAAGAGGTAGGTGAACACTGTGCAGGTGTTCCCAAGCAACAGAGCAGGCACCAATGGCCACAAGTCCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR CAA 90 bp | GGACCAAGTACATGTGAGGGAGCTGGCGCTCACAGGGCCTTAGGGTGGGCTTCAGAAGTCTTTCAGAGATaGCGGCAGTTCCTTTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: GPSTCEGAGAHRALGWASEVFQR*RQFLFK Trigger: TTTAAAAAGGAACTGCCGCAATCTCTGAAAGACTTC...TGAAGCCCACCCTAAGGCCCTGTGAGCGCCAGCTCCCTCACATGTACTTGGTCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR TCA 72 bp | TCCCTCTTGAAGATGGTAACTATCAAAATCGTAGGGTaGAACAGGTCTGGTGGCTCAGGGAGTGGGAACGCC | + |
|
Preference number: 3 (lower is better) Translates to: SLLKMVTIKIVG*NRSGGSGSGNA Trigger: GGCGTTCCCACTCCCTGAGCCACCAGACCTGTTTCACCCTACGATTTTGATAGTTACCATCTTCAAGAGGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR CAA 90 bp | AGGGGGCCTGGCTACACTGTGGGGCACAACAGGGCTTCACAAGATGGACACTACGTAACCGCTATTCCCTaGACAGAAAAACTTCATTTA | + |
|
Preference number: 3 (lower is better) Translates to: RGPGYTVGHNRASQDGHYVTAIP*TEKLHL Trigger: TAAATGAAGTTTTTCTGTCAAGGGAATAGCGGTTAC...GTAGTGTCCATCTTGTGAAGCCCTGTTGTGCCCCACAGTGTAGCCAGGCCCCCT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR TCA 72 bp | TACTCCCACTCACCTTCTCTTTACACCATCTCATACTaGTTGGCAGTGATGAACCGGGACAGACAGCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: YSHSPSLYTISY*LAVMNRDRQQA Trigger: GGCTTGCTGTCTGTCCCGGTTCATCACTGCCAATCAGTATGAGATGGTGTAAAGAGAAGGTGAGTGGGAGTA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR GCA 72 bp | AGCCAGCTAATGCTTAACAGCACTTTCTGCCATGCCTaGCAGACGCTGTTTTCTCCTTATGAATCCCTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: SQLMLNSTFCHA*QTLFSPYESLP Trigger: TGGGAGGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGTTAAGCATTAGCTGGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR CCA 72 bp | AATCGTAGGGTGAAACAGGTCTGGTGGCTCAGGGAGTaGGAACGCCTCAAATTGAGTTTAGCCAACTCAAAC | + |
|
Preference number: 3 (lower is better) Translates to: NRRVKQVWWLRE*ERLKLSLANSN Trigger: GTTTGAGTTGGCTAAACTCAATTTGAGGCGTTCCCACTCCCTGAGCCACCAGACCTGTTTCACCCTACGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR TCA 72 bp | GAACACACAGAGAGAGAGAGAGAGAGAGAGAGAGAATaGGAGAGAGAGAGAGAGATCAACCAGGAAAGAGCC | + |
|
Preference number: 3 (lower is better) Translates to: EHTERERERERE*EREREINQERA Trigger: GGCTCTTTCCTGGTTGATCTCTCTCTCTCTCTCTCATTCTCTCTCTCTCTCTCTCTCTCTCTCTGTGTGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR CCA 72 bp | CAGAACTGCATTCGCATTGCTGAGCAGAACAACAGATaGGGAGGGAGAGAGTTAGACTTTGAGATGGTCTCT | + |
|
Preference number: 3 (lower is better) Translates to: QNCIRIAEQNNR*GGRELDFEMVS Trigger: AGAGACCATCTCAAAGTCTAACTCTCTCCCTCCCCATCTGTTGTTCTGCTCAGCAATGCGAATGCAGTTCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR CCA 72 bp | GATGGTAACTATCAAAATCGTAGGGTGAAACAGGTCTaGTGGCTCAGGGAGTGGGAACGCCTCAAATTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: DGNYQNRRVKQV*WLREWERLKLS Trigger: ACTCAATTTGAGGCGTTCCCACTCCCTGAGCCACCAGACCTGTTTCACCCTACGATTTTGATAGTTACCATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR CCA 72 bp | AATTACTGGCACAGAAGAAATCATCCTATCAGATTCTaGGCCCTAAGGAATGTCATGGAAGGGGGTGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NYWHRRNHPIRF*ALRNVMEGGGR Trigger: CCTCCCACCCCCTTCCATGACATTCCTTAGGGCCCAGAATCTGATAGGATGATTTCTTCTGTGCCAGTAATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR CCA 72 bp | CCTCTCAGTTTGTCCCACCACTTCCATAGAGTATCTTaGCTCCTAACCTTCTTAACGCCTTGGATTAGCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PLSLSHHFHRVS*LLTFLTPWISL Trigger: CAGGCTAATCCAAGGCGTTAAGAAGGTTAGGAGCCAAGATACTCTATGGAAGTGGTGGGACAAACTGAGAGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR CAA 90 bp | CCTCTGTCACTCCATGCCACAAAATACACATTGTCATACACTTACGCGGAGTGGAGAACTGCATTCGCATaGCTGAGCAGAACAACAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PLSLHATKYTLSYTYAEWRTAFA*LSRTTD Trigger: ATCTGTTGTTCTGCTCAGCAATGCGAATGCAGTTCT...CCACTCCGCGTAAGTGTATGACAATGTGTATTTTGTGGCATGGAGTGACAGAGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTCAAGGCTGTTGTGTGTATCCTAAACATTTGTATGAGTCACAGGGTGTGGGAAGTGTTGAAGCAATaGGGAGAAAGTTCAGGGCAG | + |
|
Preference number: 3 (lower is better) Translates to: VLKAVVCILNICMSHRVWEVLKQ*GESSGQ Trigger: CTGCCCTGAACTTTCTCCCAATTGCTTCAACACTTC...CCACACCCTGTGACTCATACAAATGTTTAGGATACACACAACAGCCTTGAGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR GCA 72 bp | GAACAAGGAAGCCAGCTAATGCTTAACAGCACTTTCTaGCATGCCTGCCAGACGCTGTTTTCTCCTTATGAA | + |
|
Preference number: 3 (lower is better) Translates to: EQGSQLMLNSTF*HACQTLFSPYE Trigger: TTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGTTAAGCATTAGCTGGCTTCCTTGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGCTCAAGGCTGTTGTGTGTATCCTAAACATTTGTATGAGTCACAGGGTGTGGACAAGGATATACCATTaGCTCCCCAGATCAAGAAGC | + |
|
Preference number: 3 (lower is better) Translates to: VLKAVVCILNICMSHRVWTRIYH*LPRSRS Trigger: GCTTCTTGATCTGGGGAGCAAATGGTATATCCTTGT...CCACACCCTGTGACTCATACAAATGTTTAGGATACACACAACAGCCTTGAGCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR TCA 72 bp | CAGGGCAGTAAGTGCCTTTCAAATGTCTCTGGAGACTaGGTTAATTGCCCTGCTTGTGATCCGATTAGAGTT | + |
|
Preference number: 3 (lower is better) Translates to: QGSKCLSNVSGD*VNCPACDPIRV Trigger: AACTCTAATCGGATCACAAGCAGGGCAATTAACTCAGTCTCCAGAGACATTTGAAAGGCACTTACTGCCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR TCA 72 bp | CCTCAAGCTCTTCCTACCCTTTCACATACCTACCCATaGCTACATAGGCACCTAGGCATATTCTTAGATGAG | + |
|
Preference number: 3 (lower is better) Translates to: PQALPTLSHTYP*LHRHLGIFLDE Trigger: CTCATCTAAGAATATGCCTAGGTGCCTATGTAGTCATGGGTAGGTATGTGAAAGGGTAGGAAGAGCTTGAGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR GCA 72 bp | CTTTATAAACCCAGAGGATCAGCTTCTTTGGAGAGGTaGTCAGTGGTAAACTTGAGTCCAGAGACCATCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LYKPRGSASLER*SVVNLSPETIF Trigger: GAAGATGGTCTCTGGACTCAAGTTTACCACTGAGCACCTCTCCAAAGAAGCTGATCCTCTGGGTTTATAAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR CCA 72 bp | ACCATCTTCTTTTGGCTAATGGTGCCTTTAAGAAACTaGCTATGGGGTACTAGAGAGATGGCTCAGAGGCTT | + |
|
Preference number: 3 (lower is better) Translates to: TIFFWLMVPLRN*LWGTREMAQRL Trigger: AAGCCTCTGAGCCATCTCTCTAGTACCCCATAGCCAGTTTCTTAAAGGCACCATTAGCCAAAAGAAGATGGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR CCA 72 bp | CCAGATTCAAACAAGGGCTCTAAGCCAAATTACCTATaGGACATGGTGAGTCAAAGAAAACTGGACTCAGCA | + |
|
Preference number: 3 (lower is better) Translates to: PDSNKGSKPNYL*DMVSQRKLDSA Trigger: TGCTGAGTCCAGTTTTCTTTGACTCACCATGTCCCATAGGTAATTTGGCTTAGAGCCCTTGTTTGAATCTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR TCA 72 bp | ACAAGGGCTCTAAGCCAAATTACCTATGGGACATGGTaGGTCAAAGAAAACTGGACTCAGCATATTTTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: TRALSQITYGTW*VKENWTQHILP Trigger: AGGCAAAATATGCTGAGTCCAGTTTTCTTTGACTCACCATGTCCCATAGGTAATTTGGCTTAGAGCCCTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR GCA 72 bp | GCAACACAAGACATACTCATAGTGACTGACTTCACATaGTCTTGGGAGATGCCATGTCACACAAGTTTTGAT | + |
|
Preference number: 3 (lower is better) Translates to: ATQDILIVTDFT*SWEMPCHTSFD Trigger: ATCAAAACTTGTGTGACATGGCATCTCCCAAGAGCATGTGAAGTCAGTCACTATGAGTATGTCTTGTGTTGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR TCA 72 bp | CCATGCTTCCATATTTCTGTTTTTAACAGCCTGTATTaGGGAAACTGTGTGCTCAAGGCTGTTGTGTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: PCFHISVFNSLY*GNCVLKAVVCI Trigger: GATACACACAACAGCCTTGAGCACACAGTTTCCTCAATACAGGCTGTTAAAAACAGAAATATGGAAGCATGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR GCA 72 bp | TTAAGTACTTATTACCTTGTGGCCTCTGTCACTCCATaGCACAAAATACACATTGTCATACACTTACGCGGA | + |
|
Preference number: 3 (lower is better) Translates to: LSTYYLVASVTP*HKIHIVIHLRG Trigger: TCCGCGTAAGTGTATGACAATGTGTATTTTGTGGCATGGAGTGACAGAGGCCACAAGGTAATAAGTACTTAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR CAA 90 bp | AATTACTGGCACAGAAGAAATCATCCTATCAGATTCTGGGCCCTAAGGAATGTCGAAGTCTTTCAGAGATaGCGGCAGTTCCTTTTTAAA | + |
|
Preference number: 3 (lower is better) Translates to: NYWHRRNHPIRFWALRNVEVFQR*RQFLFK Trigger: TTTAAAAAGGAACTGCCGCAATCTCTGAAAGACTTC...GACATTCCTTAGGGCCCAGAATCTGATAGGATGATTTCTTCTGTGCCAGTAATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR-3UTR CAA 90 bp | GTGTGTGTGTGTGTGTACACATATACCCAAGTGTCAACCATGCTTCCATATTTCAATACTAAATCCTGCTaGACAGAGACACACACTATC | + |
|
Preference number: 3 (lower is better) Translates to: VCVCVYTYTQVSTMLPYFNTKSC*TETHTI Trigger: GATAGTGTGTGTCTCTGTCAAGCAGGATTTAGTATT...GAAATATGGAAGCATGGTTGACACTTGGGTATATGTGTACACACACACACACAC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR CCA 72 bp | CAAGACATACTCATAGTGACTGACTTCACATGCTCTTaGGAGATGCCATGTCACACAAGTTTTGATAATTAC | + |
|
Preference number: 3 (lower is better) Translates to: QDILIVTDFTCS*EMPCHTSFDNY Trigger: GTAATTATCAAAACTTGTGTGACATGGCATCTCCCAAGAGCATGTGAAGTCAGTCACTATGAGTATGTCTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR CCA 72 bp | TATATTTGGCAGATTTTTCAACATAGTATGATACTCTaGTTATACTTGGCGGGCAGAATAGTGGTTCTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: YIWQIFQHSMIL*LYLAGRIVVLS Trigger: GGAAAGAACCACTATTCTGCCCGCCAAGTATAACCAGAGTATCATACTATGTTGAAAAATCTGCCAAATATA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR TCA 72 bp | TTAGATGAGAAACTTTATCTATCAGATGAGGATCGCTaGGGTATTCTCCTCATGTATTATATCAGCAATGTG | + |
|
Preference number: 3 (lower is better) Translates to: LDEKLYLSDEDR*GILLMYYISNV Trigger: CACATTGCTGATATAATACATGAGGAGAATACCTCAGCGATCCTCATCTGATAGATAAAGTTTCTCATCTAA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR TCA 72 bp | AAGAATAAATCAGATTTGAATTATGGGATCAAAGTTTaGGCTAGTCTAAGTACTGGTATGGGACCAAGAGGA | + |
|
Preference number: 3 (lower is better) Translates to: KNKSDLNYGIKV*ASLSTGMGPRG Trigger: TCCTCTTGGTCCCATACCAGTACTTAGACTAGCTCAAACTTTGATCCCATAATTCAAATCTGATTTATTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR GCA 72 bp | GAAGAAAAGCATTTCACTGTCTTTAATACTAAATCCTaGTTGACAGAGACACACACTATCAAGTTAAGAATC | + |
|
Preference number: 3 (lower is better) Translates to: EEKHFTVFNTKS*LTETHTIKLRI Trigger: GATTCTTAACTTGATAGTGTGTGTCTCTGTCAAGCAGGATTTAGTATTAAAGACAGTGAAATGCTTTTCTTC 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| CDS-3UTR CCA 90 bp | GTTGGACCAAGTACATGTGAGGGAGCTGGCGCTCACAGGGCCTTAGGGTGGGCTAGGCTGCGCTGCACATaGTCCACAGCCCGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGPSTCEGAGAHRALGWARLRCT*STARLL Trigger: GAGGAGCCGGGCTGTGGACCATGTGCAGCGCAGCCT...AGCCCACCCTAAGGCCCTGTGAGCGCCAGCTCCCTCACATGTACTTGGTCCAAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGACCAAGTACATGTGAGGGAGCTGGCGCTCACAGGGCCTTAGGGTGGGCTCACAGCAGCTCAGGCTaGGCTGCACATGGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: VGPSTCEGAGAHRALGWAHSSSG*AAHGPQ Trigger: CTGTGGACCATGTGCAGCGCAGCCTGAGCTGCTGTG...AGCCCACCCTAAGGCCCTGTGAGCGCCAGCTCCCTCACATGTACTTGGTCCAAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGGCCTGGCTACACTGTGGGGCACAACAGGGCTTCACAAGATGGACACTACCACAGCAGCTCAGGCTaGGCTGCACATGGTCCACAG | + |
|
Preference number: 4 (lower is better) Translates to: RGPGYTVGHNRASQDGHYHSSSG*AAHGPQ Trigger: CTGTGGACCATGTGCAGCGCAGCCTGAGCTGCTGTG...GTAGTGTCCATCTTGTGAAGCCCTGTTGTGCCCCACAGTGTAGCCAGGCCCCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | GTTGGACCAAGTACATGTGAGGGAGCTGGCGCTCACAGGGCCTTAGGGTGGGCTCCAGGAAGTAGGGGCTaGTGCTCCAGTTGGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: VGPSTCEGAGAHRALGWAPGSRG*CSSWCS Trigger: ACTACACCAACTGGAGCAGCAGCCCCTACTTCCTGG...AGCCCACCCTAAGGCCCTGTGAGCGCCAGCTCCCTCACATGTACTTGGTCCAAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR CCA 90 bp | AACAGCACTTTCTGCCATGCCTGCCAGACGCTGTTTTCTCCTTATGAATCCCTCAGGCTGCGCTGCACATaGTCCACAGCCCGGCTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NSTFCHACQTLFSPYESLRLRCT*STARLL Trigger: GAGGAGCCGGGCTGTGGACCATGTGCAGCGCAGCCT...GAGGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR CCA 90 bp | CACTGTGGGGCACAACAGGGCTTCACAAGATGGACACTACGTATGACGTGGGCTGGCTGCTGCTCCAGTTaGTGTAGTTCTGCACGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: HCGAQQGFTRWTLRMTWAGCCSS*CSSARH Trigger: GTGGCGTGCAGAACTACACCAACTGGAGCAGCAGCC...AGCCCACGTCATACGTAGTGTCCATCTTGTGAAGCCCTGTTGTGCCCCACAGTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR CAA 72 bp | TCCGTGAGGGACTTGTGGCCATTGGTGCCTGCTCTGTaGCTTGGGAACACCTGCACAGTGTTCACCTACCTC | + |
|
Preference number: 4 (lower is better) Translates to: SVRDLWPLVPAL*LGNTCTVFTYL Trigger: GAGGTAGGTGAACACTGTGCAGGTGTTCCCAAGCAACAGAGCAGGCACCAATGGCCACAAGTCCCTCACGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | AGGGGGCCTGGCTACACTGTGGGGCACAACAGGGCTTCACAAGATGGACACTACGCAGATCCAGGGGATTaGAGTCAGTTTCGTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: RGPGYTVGHNRASQDGHYADPGD*SQFRSC Trigger: GCATGAACGAAACTGACTGCAATCCCCTGGATCTGC...GTAGTGTCCATCTTGTGAAGCCCTGTTGTGCCCCACAGTGTAGCCAGGCCCCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR TCA 90 bp | CACTGTGGGGCACAACAGGGCTTCACAAGATGGACACTACGTATGACGTGGGCTTGGTGCCGGTTCCAATaGGCACATAGGGAGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: HCGAQQGFTRWTLRMTWAWCRFQ*AHREHL Trigger: CAAATGCTCCCTATGTGCTCATTGGAACCGGCACCA...AGCCCACGTCATACGTAGTGTCCATCTTGTGAAGCCCTGTTGTGCCCCACAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | CAGGGCCTTAGGGTGGGCTTCACTATGACTAGCTGCAGGGGGCCTGGCTACACTACACAAATCCAGAAATaGCAGCAACAAGCTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QGLRVGFTMTSCRGPGYTTQIQK*QQQAQP Trigger: TGGCTGAGCTTGTTGCTGGCATTTCTGGATTTGTGT...AGTGTAGCCAGGCCCCCTGCAGCTAGTCATAGTGAAGCCCACCCTAAGGCCCTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCACTTTCTGCCATGCCTGCCAGACGCTGTTTTCTCCTTATGAATCCCTCCGGCTGCTGCTCCAGTTaGTGTAGTTCTGCACGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: TALSAMPARRCFLLMNPSGCCSS*CSSARH Trigger: GTGGCGTGCAGAACTACACCAACTGGAGCAGCAGCC...GGAGGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR CAA 72 bp | GGGGCCAGTGAAGATGTGATAACCAGTCACCTACAGTaGGACCAAGTACATGTGAGGGAGCTGGCGCTCACA | + |
|
Preference number: 4 (lower is better) Translates to: GASEDVITSHLQ*DQVHVRELALT Trigger: TGTGAGCGCCAGCTCCCTCACATGTACTTGGTCCAACTGTAGGTGACTGGTTATCACATCTTCACTGGCCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | ACCATCGGCATATCTACGGAAAGGTGTGTGGCATTCTTGGACCACAGTGAGGGGGGAAGTAGGGGCTGCTaGTCCAGTTGGTGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TIGISTERCVAFLDHSEGGSRGC*SSWCSS Trigger: AGAACTACACCAACTGGAGCAGCAGCCCCTACTTCC...CCCCTCACTGTGGTCCAAGAATGCCACACACCTTTCCGTAGATATGCCGATGGT 53% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | GGTGAAACAGGTCTGGTGGCTCAGGGAGTGGGAACGCCTCAAATTGAGTTTAGCGGAAGTAGGGGCTGCTaGTCCAGTTGGTGTAGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GETGLVAQGVGTPQIEFSGSRGC*SSWCSS Trigger: AGAACTACACCAACTGGAGCAGCAGCCCCTACTTCC...GCTAAACTCAATTTGAGGCGTTCCCACTCCCTGAGCCACCAGACCTGTTTCACC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | AACAGCACTTTCTGCCATGCCTGCCAGACGCTGTTTTCTCCTTATGAATCCCTCCCAGGAAGTAGGGGCTaGTGCTCCAGTTGGTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: NSTFCHACQTLFSPYESLPGSRG*CSSWCS Trigger: ACTACACCAACTGGAGCAGCAGCCCCTACTTCCTGG...GAGGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | ACAGCACTTTCTGCCATGCCTGCCAGACGCTGTTTTCTCCTTATGAATCCCTCCGCCACAGTCAGATTGTaGAGATCCAGGGGATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: TALSAMPARRCFLLMNPSATVRL*RSRGLQ Trigger: CTGCAATCCCCTGGATCTGCACAATCTGACTGTGGC...GGAGGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR CCA 90 bp | ATCCGTGAGGGACTTGTGGCCATTGGTGCCTGCTCTGTTGCTTGGGAACACCTGCATTGTAGTTCTGCATaGCATCCGTGTAAGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: IREGLVAIGACSVAWEHLHCSSA*HPCKSS Trigger: TGAGGACTTACACGGATGCCATGCAGAACTACAATG...CAGGTGTTCCCAAGCAACAGAGCAGGCACCAATGGCCACAAGTCCCTCACGGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | ACCATCGGCATATCTACGGAAAGGTGTGTGGCATTCTTGGACCACAGTGAGGGGGGCTCCTCTCATCATTaGCATTGTAGTTCTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: TIGISTERCVAFLDHSEGGSSHH*HCSSAW Trigger: CCATGCAGAACTACAATGGCAATGATGAGAGGAGCC...CCCCTCACTGTGGTCCAAGAATGCCACACACCTTTCCGTAGATATGCCGATGGT 51% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | GAAGTCTTTCAGAGATTGCGGCAGTTCCTTTTTAAAAACAGGCCTCTTATTCCACAGCTCAGGCTGCGCTaGACATGGTCCACAGCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: EVFQRLRQFLFKNRPLIPQLRLR*TWSTAR Trigger: CCGGGCTGTGGACCATGTGCAGCGCAGCCTGAGCTG...TGGAATAAGAGGCCTGTTTTTAAAAAGGAACTGCCGCAATCTCTGAAAGACTTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | ACCATCGGCATATCTACGGAAAGGTGTGTGGCATTCTTGGACCACAGTGAGGGGGAACGCAATTCCAAATaGCACTCCAGCAATGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: TIGISTERCVAFLDHSEGERNSK*HSSNDP Trigger: GGGATCATTGCTGGAGTGGCATTTGGAATTGCGTTC...CCCCTCACTGTGGTCCAAGAATGCCACACACCTTTCCGTAGATATGCCGATGGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR CCA 90 bp | ACAGCACTTTCTGCCATGCCTGCCAGACGCTGTTTTCTCCTTATGAATCCCTCCCAGTTTCAGCATCCATaGACTACCACGGCATGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: TALSAMPARRCFLLMNPSQFQHP*TTTACS Trigger: GCTACATGCCGTGGTAGTCCATGGATGCTGAAACTG...GGAGGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR CAA 72 bp | TTGTGGCCTCTGTCACTCCATGCCACAAAATACACATaGTCATACACTTACGCGGAGTGGCCGAAGGTACCA | + |
|
Preference number: 4 (lower is better) Translates to: LWPLSLHATKYT*SYTYAEWPKVP Trigger: TGGTACCTTCGGCCACTCCGCGTAAGTGTATGACAATGTGTATTTTGTGGCATGGAGTGACAGAGGCCACAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | AACAGCACTTTCTGCCATGCCTGCCAGACGCTGTTTTCTCCTTATGAATCCCTCACACAAATCCAGAAATaGCAGCAACAAGCTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: NSTFCHACQTLFSPYESLTQIQK*QQQAQP Trigger: TGGCTGAGCTTGTTGCTGGCATTTCTGGATTTGTGT...GAGGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | GCCAGTGAAGATGTGATAACCAGTCACCTACAGTTGGACCAAGTACATGTGAGGGGCTCCTCTCATCATTaGCATTGTAGTTCTGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: ASEDVITSHLQLDQVHVRGSSHH*HCSSAW Trigger: CCATGCAGAACTACAATGGCAATGATGAGAGGAGCC...CCTCACATGTACTTGGTCCAACTGTAGGTGACTGGTTATCACATCTTCACTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | CCTCTGTCACTCCATGCCACAAAATACACATTGTCATACACTTACGCGGAGTGGGAACGCAATTCCAAATaGCACTCCAGCAATGATCCC | + |
|
Preference number: 4 (lower is better) Translates to: PLSLHATKYTLSYTYAEWERNSK*HSSNDP Trigger: GGGATCATTGCTGGAGTGGCATTTGGAATTGCGTTC...CCACTCCGCGTAAGTGTATGACAATGTGTATTTTGTGGCATGGAGTGACAGAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| CDS-3UTR CCA 90 bp | CTTAACAGCACTTTCTGCCATGCCTGCCAGACGCTGTTTTCTCCTTATGAATCCCATAGGGAGCATTTGTaGAGTTCTCAGCAATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: LNSTFCHACQTLFSPYESHREHL*SSQQSG Trigger: CCCTGATTGCTGAGAACTCCACAAATGCTCCCTATG...GGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGTTAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR CCA 90 bp | TTAACAGCACTTTCTGCCATGCCTGCCAGACGCTGTTTTCTCCTTATGAATCCCCATTGTAGTTCTGCATaGCATCCGTGTAAGTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LTALSAMPARRCFLLMNPHCSSA*HPCKSS Trigger: TGAGGACTTACACGGATGCCATGCAGAACTACAATG...GGGATTCATAAGGAGAAAACAGCGTCTGGCAGGCATGGCAGAAAGTGCTGTTAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR TCA 90 bp | GAAGTCTTTCAGAGATTGCGGCAGTTCCTTTTTAAAAACAGGCCTCTTATTCCATGGTGCCGGTTCCAATaGGCACATAGGGAGCATTTG | + |
|
Preference number: 4 (lower is better) Translates to: EVFQRLRQFLFKNRPLIPWCRFQ*AHREHL Trigger: CAAATGCTCCCTATGTGCTCATTGGAACCGGCACCA...TGGAATAAGAGGCCTGTTTTTAAAAAGGAACTGCCGCAATCTCTGAAAGACTTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | AATTACTGGCACAGAAGAAATCATCCTATCAGATTCTGGGCCCTAAGGAATGTCGCAGATCCAGGGGATTaGAGTCAGTTTCGTTCATGC | + |
|
Preference number: 4 (lower is better) Translates to: NYWHRRNHPIRFWALRNVADPGD*SQFRSC Trigger: GCATGAACGAAACTGACTGCAATCCCCTGGATCTGC...GACATTCCTTAGGGCCCAGAATCTGATAGGATGATTTCTTCTGTGCCAGTAATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR CAA 72 bp | CTCAGTGGTAAACTTGAGTCCAGAGACCATCTTCTTTaGGCTAATGGTGCCTTTAAGAAACTGGCTATGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LSGKLESRDHLL*ANGAFKKLAMG Trigger: CCCCATAGCCAGTTTCTTAAAGGCACCATTAGCCAAAAGAAGATGGTCTCTGGACTCAAGTTTACCACTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR CAA 72 bp | ATGTTTTTCAGAGGCCGCACAAAAACTCCTCTCAGTTaGTCCCACCACTTCCATAGAGTATCTTGGCTCCTA | + |
|
Preference number: 4 (lower is better) Translates to: MFFRGRTKTPLS*SHHFHRVSWLL Trigger: TAGGAGCCAAGATACTCTATGGAAGTGGTGGGACAAACTGAGAGGAGTTTTTGTGCGGCCTCTGAAAAACAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| CDS-3UTR CCA 90 bp | GTGTGTGTGTGTGTGTACACATATACCCAAGTGTCAACCATGCTTCCATATTTCCATAGGGAGCATTTGTaGAGTTCTCAGCAATCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCVCVYTYTQVSTMLPYFHREHL*SSQQSG Trigger: CCCTGATTGCTGAGAACTCCACAAATGCTCCCTATG...GAAATATGGAAGCATGGTTGACACTTGGGTATATGTGTACACACACACACACAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| 3UTR CAA 72 bp | CTGTGTGCTCAAGGCTGTTGTGTGTATCCTAAACATTaGTATGAGTCACAGGGTGTGGAATCCTCAGAATTG | + |
|
Preference number: 4 (lower is better) Translates to: LCAQGCCVYPKH*YESQGVESSEL Trigger: CAATTCTGAGGATTCCACACCCTGTGACTCATACAAATGTTTAGGATACACACAACAGCCTTGAGCACACAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| CDS-3UTR GCA 90 bp | AAGAATCTATCCCCTGATCTAAGCAAGGGCCACATAAATAATAACCTACTAAACGCCACAGTCAGATTGTaGAGATCCAGGGGATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KNLSPDLSKGHINNNLLNATVRL*RSRGLQ Trigger: CTGCAATCCCCTGGATCTGCACAATCTGACTGTGGC...GTTTAGTAGGTTATTATTTATGTGGCCCTTGCTTAGATCAGGGGATAGATTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| CDS-3UTR CCA 90 bp | GGCAGGGATAGTATGTACTGTGCTCTAACGTTCTTTGGAAGTCTTTCAGAGATTAGGTTATCACAGGTTTaGTCTCCATTCTCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: GRDSMYCALTFFGSLSEIRLSQV*SPFSSM Trigger: CATCGAGGAGAATGGAGACCAAACCTGTGATAACCT...AATCTCTGAAAGACTTCCAAAGAACGTTAGAGCACAGTACATACTATCCCTGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
||
| 3UTR CAA 72 bp | GGCCGAAGGTACCATGGCTATAATGTTCAGATTATATaGCTGACTGAGAACCTAAATTCCTCTAGGTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: GRRYHGYNVQII*LTENLNSSRCA Trigger: TGCACACCTAGAGGAATTTAGGTTCTCAGTCAGCAATATAATCTGAACATTATAGCCATGGTACCTTCGGCC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
||
| CDS-3UTR CCA 90 bp | GAAGTCTTTCAGAGATTGCGGCAGTTCCTTTTTAAAAACAGGCCTCTTATTCCAAGGTTATCACAGGTTTaGTCTCCATTCTCCTCGATG | + |
|
Preference number: 4 (lower is better) Translates to: EVFQRLRQFLFKNRPLIPRLSQV*SPFSSM Trigger: CATCGAGGAGAATGGAGACCAAACCTGTGATAACCT...TGGAATAAGAGGCCTGTTTTTAAAAAGGAACTGCCGCAATCTCTGAAAGACTTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| 3UTR CAA 72 bp | CAGATTTTTCAACATAGTATGATACTCTGGTTATACTaGGCGGGCAGAATAGTGGTTCTTTCCTTGAGACAA | + |
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Preference number: 4 (lower is better) Translates to: QIFQHSMILWLY*AGRIVVLSLRQ Trigger: TTGTCTCAAGGAAAGAACCACTATTCTGCCCGCCAAGTATAACCAGAGTATCATACTATGTTGAAAAATCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| CDS GCA 90 bp | TCAGGCTGCGCTGCACATGGTCCACAGCCCGGCTCCTCTCATCATTaGCATTGTAGTTCTGCATGGCATCCGTGTAAGTCCTCAGGAAGG | + |
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Preference number: 5 (lower is better) Translates to: SGCAAHGPQPGSSHH*HCSSAWHPCKSSGR Trigger: CCTTCCTGAGGACTTACACGGATGCCATGCAGAACTACAATGGCAATGATGAGAGGAGCCGGGCTGTGGACCATGTGCAGCGCAGCCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| CDS-3UTR CAA 90 bp | CAGGGCCTTAGGGTGGGCTTCACTATGACTAGCTGCAGGGGGCCTGGCTACACTCAGGTTATCACAGGTTaGGTCTCCATTCTCCTCGAT | + |
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Preference number: 5 (lower is better) Translates to: QGLRVGFTMTSCRGPGYTQVITG*VSILLD Trigger: ATCGAGGAGAATGGAGACCAAACCTGTGATAACCTG...AGTGTAGCCAGGCCCCCTGCAGCTAGTCATAGTGAAGCCCACCCTAAGGCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| CDS-3UTR CAA 90 bp | CAGGGCCTTAGGGTGGGCTTCACTATGACTAGCTGCAGGGGGCCTGGCTACACTGCACATAGGGAGCATTaGTGGAGTTCTCAGCAATCA | + |
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Preference number: 5 (lower is better) Translates to: QGLRVGFTMTSCRGPGYTAHREH*WSSQQS Trigger: TGATTGCTGAGAACTCCACAAATGCTCCCTATGTGC...AGTGTAGCCAGGCCCCCTGCAGCTAGTCATAGTGAAGCCCACCCTAAGGCCCTG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| CDS-3UTR CAA 90 bp | GGTGAAACAGGTCTGGTGGCTCAGGGAGTGGGAACGCCTCAAATTGAGTTTAGCGCGGCCACAGTCAGATaGTGCAGATCCAGGGGATTG | + |
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Preference number: 5 (lower is better) Translates to: GETGLVAQGVGTPQIEFSAATVR*CRSRGL Trigger: CAATCCCCTGGATCTGCACAATCTGACTGTGGCCGC...GCTAAACTCAATTTGAGGCGTTCCCACTCCCTGAGCCACCAGACCTGTTTCACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000115526.2 |
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| CDS-3UTR CAA 90 bp | GCCAGTGAAGATGTGATAACCAGTCACCTACAGTTGGACCAAGTACATGTGAGGGCGGCCACAGTCAGATaGTGCAGATCCAGGGGATTG | + |
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Preference number: 5 (lower is better) Translates to: ASEDVITSHLQLDQVHVRAATVR*CRSRGL Trigger: CAATCCCCTGGATCTGCACAATCTGACTGTGGCCGC...CCTCACATGTACTTGGTCCAACTGTAGGTGACTGGTTATCACATCTTCACTGGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| CDS TCA 90 bp | AGCATCCAAAGAGGCCAAAAACCACGATGGTGGTGCCGGTTCCAATaGGCACATAGGGAGCATTTGTGGAGTTCTCAGCAATCAGGGAGA | + |
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Preference number: 5 (lower is better) Translates to: SIQRGQKPRWWCRFQ*AHREHLWSSQQSGR Trigger: TCTCCCTGATTGCTGAGAACTCCACAAATGCTCCCTATGTGCTCATTGGAACCGGCACCACCATCGTGGTTTTTGGCCTCTTTGGATGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| CDS-3UTR CAA 90 bp | TCCCACTGTGTCTCCTCTCCCGTGCTTGACAGCCTGAAGAAGGTAGGAAAGAATGCACATAGGGAGCATTaGTGGAGTTCTCAGCAATCA | + |
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Preference number: 5 (lower is better) Translates to: SHCVSSPVLDSLKKVGKNAHREH*WSSQQS Trigger: TGATTGCTGAGAACTCCACAAATGCTCCCTATGTGC...ATTCTTTCCTACCTTCTTCAGGCTGTCAAGCACGGGAGAGGAGACACAGTGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| CDS-3UTR CAA 90 bp | GAAAAGATAATTACCATCGGCATATCTACGGAAAGGTGTGTGGCATTCTTGGACCAGGTTATCACAGGTTaGGTCTCCATTCTCCTCGAT | + |
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Preference number: 5 (lower is better) Translates to: EKIITIGISTERCVAFLDQVITG*VSILLD Trigger: ATCGAGGAGAATGGAGACCAAACCTGTGATAACCTG...GTCCAAGAATGCCACACACCTTTCCGTAGATATGCCGATGGTAATTATCTTTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| CDS-3UTR CAA 90 bp | GAAGTCTTTCAGAGATTGCGGCAGTTCCTTTTTAAAAACAGGCCTCTTATTCCATGCAGATCCAGGGGATaGCAGTCAGTTTCGTTCATG | + |
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Preference number: 5 (lower is better) Translates to: EVFQRLRQFLFKNRPLIPCRSRG*QSVSFM Trigger: CATGAACGAAACTGACTGCAATCCCCTGGATCTGCA...TGGAATAAGAGGCCTGTTTTTAAAAAGGAACTGCCGCAATCTCTGAAAGACTTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| CDS TCA 72 bp | AGAGGCCAAAAACCACGATGGTGGTGCCGGTTCCAATaGGCACATAGGGAGCATTTGTGGAGTTCTCAGCAA | + |
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Preference number: 6 (lower is better) Translates to: RGQKPRWWCRFQ*AHREHLWSSQQ Trigger: TTGCTGAGAACTCCACAAATGCTCCCTATGTGCTCATTGGAACCGGCACCACCATCGTGGTTTTTGGCCTCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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| CDS CCA 72 bp | CAGGGACAGGAACATGGCATACAGTTTCAGCATCCATaGACTACCACGGCATGTAGCAAAGCATCCAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: QGQEHGIQFQHP*TTTACSKASKE Trigger: CTCTTTGGATGCTTTGCTACATGCCGTGGTAGTCCATGGATGCTGAAACTGTATGCCATGTTCCTGTCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000076354.13 ENSMUST00000115526.2 |
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