Pregenerated sensors for TSPAN4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025511Ensembl transcript IDs: ENSMUST00000026585.14, ENSMUST00000117634.2, ENSMUST00000138092.8, ENSMUST00000146305.8, ENSMUST00000239217.2
Found 106 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCTGGCCTCCAGCTCTTCCCCCTGCATTCAGCAGAACACCAGTCCTaGAGGGGGAGCGGGTTTGGACATCTTCCTTCCCGTGGGCGGGTC | + |
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Preference number: 1 (lower is better) Translates to: SGLQLFPLHSAEHQS*RGSGFGHLPSRGRV Trigger: GACCCGCCCACGGGAAGGAAGATGTCCAAACCCGCTCCCCCTGCAGGACTGGTGTTCTGCTGAATGCAGGGGGAAGAGCTGGAGGCCAGA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR CCA 90 bp | CTGGTGTCTGCTGCCACCCAAGCAGAGTGCCCTCAGGTGCAGGGATaGATGCTGGGTGCTCTGGCCTCCAGCTCTTCCCCCTGCATTCAG | + |
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Preference number: 1 (lower is better) Translates to: LVSAATQAECPQVQG*MLGALASSSSPCIQ Trigger: CTGAATGCAGGGGGAAGAGCTGGAGGCCAGAGCACCCAGCATCCATCCCTGCACCTGAGGGCACTCTGCTTGGGTGGCAGCAGACACCAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR GCA 90 bp | TGTCTGCTGCCACCCAAGCAGAGTGCCCTCAGGTGCAGGGATGGATaGTGGGTGCTCTGGCCTCCAGCTCTTCCCCCTGCATTCAGCAGA | + |
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Preference number: 1 (lower is better) Translates to: CLLPPKQSALRCRDG*WVLWPPALPPAFSR Trigger: TCTGCTGAATGCAGGGGGAAGAGCTGGAGGCCAGAGCACCCAGCATCCATCCCTGCACCTGAGGGCACTCTGCTTGGGTGGCAGCAGACA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR CCA 90 bp | CTGCTGCCACCCAAGCAGAGTGCCCTCAGGTGCAGGGATGGATGCTaGGTGCTCTGGCCTCCAGCTCTTCCCCCTGCATTCAGCAGAACA | + |
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Preference number: 1 (lower is better) Translates to: LLPPKQSALRCRDGC*VLWPPALPPAFSRT Trigger: TGTTCTGCTGAATGCAGGGGGAAGAGCTGGAGGCCAGAGCACCCAGCATCCATCCCTGCACCTGAGGGCACTCTGCTTGGGTGGCAGCAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR GCA 90 bp | TCTATAGTCTGGTGTCTGCTGCCACCCAAGCAGAGTGCCCTCAGGTaGAGGGATGGATGCTGGGTGCTCTGGCCTCCAGCTCTTCCCCCT | + |
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Preference number: 1 (lower is better) Translates to: SIVWCLLPPKQSALR*RDGCWVLWPPALPP Trigger: AGGGGGAAGAGCTGGAGGCCAGAGCACCCAGCATCCATCCCTGCACCTGAGGGCACTCTGCTTGGGTGGCAGCAGACACCAGACTATAGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR CCA 90 bp | CCACGACACTGTCATGGAATGTGGATCATGGGACCTGGCCCTGCCTaGAGCACCAAGATCATCGTGGGCCTTGAGCAGACTGGGCCTGCC | + |
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Preference number: 1 (lower is better) Translates to: PRHCHGMWIMGPGPA*STKIIVGLEQTGPA Trigger: GGCAGGCCCAGTCTGCTCAAGGCCCACGATGATCTTGGTGCTCCAGGCAGGGCCAGGTCCCATGATCCACATTCCATGACAGTGTCGTGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR CCA 90 bp | TTAAGATGCATCTGGAACCACGACACTGTCATGGAATGTGGATCATaGGACCTGGCCCTGCCTGGAGCACCAAGATCATCGTGGGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: LRCIWNHDTVMECGS*DLALPGAPRSSWAL Trigger: CAAGGCCCACGATGATCTTGGTGCTCCAGGCAGGGCCAGGTCCCATGATCCACATTCCATGACAGTGTCGTGGTTCCAGATGCATCTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR CCA 90 bp | CACTTTATTAAGATGCATCTGGAACCACGACACTGTCATGGAATGTaGATCATGGGACCTGGCCCTGCCTGGAGCACCAAGATCATCGTG | + |
|
Preference number: 1 (lower is better) Translates to: HFIKMHLEPRHCHGM*IMGPGPAWSTKIIV Trigger: CACGATGATCTTGGTGCTCCAGGCAGGGCCAGGTCCCATGATCCACATTCCATGACAGTGTCGTGGTTCCAGATGCATCTTAATAAAGTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR GCA 90 bp | GGCCCTGCCTGGAGCACCAAGATCATCGTGGGCCTTGAGCAGACTGGGCCTGCCGCCACCCAAGCAGAGTaGCCTCAGGTGCAGGGATGG | + |
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Preference number: 2 (lower is better) Translates to: GPAWSTKIIVGLEQTGPAATQAE*PQVQGW Trigger: CCATCCCTGCACCTGAGGGCACTCTGCTTGGGTGGC...GGCAGGCCCAGTCTGCTCAAGGCCCACGATGATCTTGGTGCTCCAGGCAGGGCC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR CCA 90 bp | CCTGCCTGGAGCACCAAGATCATCGTGGGCCTTGAGCAGACTGGGCCTGCCCCCAGTGTCAAAGTTCCCTaGGCCCTTAGCCCTGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: PAWSTKIIVGLEQTGPAPSVKVP*ALSPGC Trigger: GCACCCAGGGCTAAGGGCCCAGGGAACTTTGACACT...GGGGGCAGGCCCAGTCTGCTCAAGGCCCACGATGATCTTGGTGCTCCAGGCAGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR TCA 90 bp | GAACCACGACACTGTCATGGAATGTGGATCATGGGACCTGGCCCTGCCTGGAGCGATCATCGTGGGCCTTaGGCAGACTGGGCCTGCCCC | + |
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Preference number: 2 (lower is better) Translates to: EPRHCHGMWIMGPGPAWSDHRGP*ADWACP Trigger: GGGGCAGGCCCAGTCTGCTCAAGGCCCACGATGATC...GCTCCAGGCAGGGCCAGGTCCCATGATCCACATTCCATGACAGTGTCGTGGTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR GCA 90 bp | CAGACTGGGCCTGCCCCCAACCTAGCAACCATGCAAGGCTGGGAACCCCATCCTCAGAGTGCCCTCAGGTaGAGGGATGGATGCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: QTGPAPNLATMQGWEPHPQSALR*RDGCWV Trigger: CACCCAGCATCCATCCCTGCACCTGAGGGCACTCTG...AGGATGGGGTTCCCAGCCTTGCATGGTTGCTAGGTTGGGGGCAGGCCCAGTCTG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR GCA 90 bp | GCCCTGCCTGGAGCACCAAGATCATCGTGGGCCTTGAGCAGACTGGGCCTGCCCTCCAGCTCTTCCCCCTaGATTCAGCAGAACACCAGT | + |
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Preference number: 2 (lower is better) Translates to: ALPGAPRSSWALSRLGLPSSSSP*IQQNTS Trigger: ACTGGTGTTCTGCTGAATGCAGGGGGAAGAGCTGGA...GGGCAGGCCCAGTCTGCTCAAGGCCCACGATGATCTTGGTGCTCCAGGCAGGGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR CCA 90 bp | AATGTGGATCATGGGACCTGGCCCTGCCTGGAGCACCAAGATCATCGTGGGCCTAGTGTCAAAGTTCCCTaGGCCCTTAGCCCTGGGTGC | + |
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Preference number: 2 (lower is better) Translates to: NVDHGTWPCLEHQDHRGPSVKVP*ALSPGC Trigger: GCACCCAGGGCTAAGGGCCCAGGGAACTTTGACACT...AGGCCCACGATGATCTTGGTGCTCCAGGCAGGGCCAGGTCCCATGATCCACATT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR TCA 90 bp | GGCCCTGCCTGGAGCACCAAGATCATCGTGGGCCTTGAGCAGACTGGGCCTGCCGAACCCCATCCTGTGTaGACACTGGAAGGTATATAT | + |
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Preference number: 2 (lower is better) Translates to: GPAWSTKIIVGLEQTGPAEPHPV*TLEGIY Trigger: ATATATACCTTCCAGTGTTCACACAGGATGGGGTTC...GGCAGGCCCAGTCTGCTCAAGGCCCACGATGATCTTGGTGCTCCAGGCAGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAAAAGTGTCAAAGTTCCCTGGGCCCTTAGCCCTGGGTGCCATTTGGCACCACGTGGGCGGGTCCTTTaGCAGAGAAGCAGAGGCTGT | + |
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Preference number: 2 (lower is better) Translates to: IKSVKVPWALSPGCHLAPRGRVL*QRSRGC Trigger: ACAGCCTCTGCTTCTCTGCCAAAGGACCCGCCCACG...TGGTGCCAAATGGCACCCAGGGCTAAGGGCCCAGGGAACTTTGACACTTTTTAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR GCA 90 bp | AGACCCACAGTCTGCTCACACACTTTATTAAGATGCATCTGGAACCACGACACTCAGAGTGCCCTCAGGTaGAGGGATGGATGCTGGGTG | + |
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Preference number: 2 (lower is better) Translates to: RPTVCSHTLLRCIWNHDTQSALR*RDGCWV Trigger: CACCCAGCATCCATCCCTGCACCTGAGGGCACTCTG...AGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGTGAGCAGACTGTGGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR CCA 90 bp | AGACCCACAGTCTGCTCACACACTTTATTAAGATGCATCTGGAACCACGACACTGGACCTGGCCCTGCCTaGAGCACCAAGATCATCGTG | + |
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Preference number: 2 (lower is better) Translates to: RPTVCSHTLLRCIWNHDTGPGPA*STKIIV Trigger: CACGATGATCTTGGTGCTCCAGGCAGGGCCAGGTCC...AGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGTGAGCAGACTGTGGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR GCA 90 bp | ACCCACAGTCTGCTCACACACTTTATTAAGATGCATCTGGAACCACGACACTGTCATGGGACCTGGCCCTaGCTGGAGCACCAAGATCAT | + |
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Preference number: 2 (lower is better) Translates to: THSLLTHFIKMHLEPRHCHGTWP*LEHQDH Trigger: ATGATCTTGGTGCTCCAGGCAGGGCCAGGTCCCATG...ACAGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGTGAGCAGACTGTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATTAAGATGCATCTGGAACCACGACACTGTCATGGAATGTGGATCATGGGACGTGGGCGGGTCCTTTaGCAGAGAAGCAGAGGCTGT | + |
|
Preference number: 2 (lower is better) Translates to: FIKMHLEPRHCHGMWIMGRGRVL*QRSRGC Trigger: ACAGCCTCTGCTTCTCTGCCAAAGGACCCGCCCACG...TCCCATGATCCACATTCCATGACAGTGTCGTGGTTCCAGATGCATCTTAATAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR GCA 90 bp | AGACCCACAGTCTGCTCACACACTTTATTAAGATGCATCTGGAACCACGACACTTCCAGCTCTTCCCCCTaGATTCAGCAGAACACCAGT | + |
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Preference number: 2 (lower is better) Translates to: RPTVCSHTLLRCIWNHDTSSSSP*IQQNTS Trigger: ACTGGTGTTCTGCTGAATGCAGGGGGAAGAGCTGGA...AGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGTGAGCAGACTGTGGGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR CCA 90 bp | TTTATTAAGATGCATCTGGAACCACGACACTGTCATGGAATGTGGATCATGGGAACCAACTCTATAGTCTaGTGTCTGCTGCCACCCAAG | + |
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Preference number: 2 (lower is better) Translates to: FIKMHLEPRHCHGMWIMGTNSIV*CLLPPK Trigger: CTTGGGTGGCAGCAGACACCAGACTATAGAGTTGGT...TCCCATGATCCACATTCCATGACAGTGTCGTGGTTCCAGATGCATCTTAATAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR TCA 90 bp | TTTATTAAGATGCATCTGGAACCACGACACTGTCATGGAATGTGGATCATGGGAGAACCCCATCCTGTGTaGACACTGGAAGGTATATAT | + |
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Preference number: 2 (lower is better) Translates to: FIKMHLEPRHCHGMWIMGEPHPV*TLEGIY Trigger: ATATATACCTTCCAGTGTTCACACAGGATGGGGTTC...TCCCATGATCCACATTCCATGACAGTGTCGTGGTTCCAGATGCATCTTAATAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR CCA 90 bp | AGACCCACAGTCTGCTCACACACTTTATTAAGATGCATCTGGAACCACGACACTATCCTGTGTGAACACTaGAAGGTATATATGGATATA | + |
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Preference number: 2 (lower is better) Translates to: RPTVCSHTLLRCIWNHDTILCEH*KVYMDI Trigger: TATATCCATATATACCTTCCAGTGTTCACACAGGAT...AGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGTGAGCAGACTGTGGGTCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR CCA 72 bp | GCTGCCACCCAAGCAGAGTGCCCTCAGGTGCAGGGATaGATGCTGGGTGCTCTGGCCTCCAGCTCTTCCCCC | + |
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Preference number: 3 (lower is better) Translates to: AATQAECPQVQG*MLGALASSSSP Trigger: GGGGGAAGAGCTGGAGGCCAGAGCACCCAGCATCCATCCCTGCACCTGAGGGCACTCTGCTTGGGTGGCAGC 67% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR GCA 72 bp | TGGATGCTGGGTGCTCTGGCCTCCAGCTCTTCCCCCTaGATTCAGCAGAACACCAGTCCTGCAGGGGGAGCG | + |
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Preference number: 3 (lower is better) Translates to: WMLGALASSSSP*IQQNTSPAGGA Trigger: CGCTCCCCCTGCAGGACTGGTGTTCTGCTGAATGCAGGGGGAAGAGCTGGAGGCCAGAGCACCCAGCATCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR TCA 72 bp | TGGCCCTGCCTGGAGCACCAAGATCATCGTGGGCCTTaGGCAGACTGGGCCTGCCCCCAACCTAGCAACCAT | + |
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Preference number: 3 (lower is better) Translates to: WPCLEHQDHRGP*ADWACPQPSNH Trigger: ATGGTTGCTAGGTTGGGGGCAGGCCCAGTCTGCTCAAGGCCCACGATGATCTTGGTGCTCCAGGCAGGGCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR CAA 90 bp | GGGCCCTTAGCCCTGGGTGCCATTTGGCACCAACTCTATAGTCTGGTGTCTGCTCCGTGGGCGGGTCCTTaGGCAGAGAAGCAGAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: GPLALGAIWHQLYSLVSAPWAGP*AEKQRL Trigger: CAGCCTCTGCTTCTCTGCCAAAGGACCCGCCCACGG...AGCAGACACCAGACTATAGAGTTGGTGCCAAATGGCACCCAGGGCTAAGGGCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR GCA 72 bp | CTCTATAGTCTGGTGTCTGCTGCCACCCAAGCAGAGTaGCCTCAGGTGCAGGGATGGATGCTGGGTGCTCTG | + |
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Preference number: 3 (lower is better) Translates to: LYSLVSAATQAE*PQVQGWMLGAL Trigger: CAGAGCACCCAGCATCCATCCCTGCACCTGAGGGCACTCTGCTTGGGTGGCAGCAGACACCAGACTATAGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR CCA 72 bp | ACCACGACACTGTCATGGAATGTGGATCATGGGACCTaGCCCTGCCTGGAGCACCAAGATCATCGTGGGCCT | + |
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Preference number: 3 (lower is better) Translates to: TTTLSWNVDHGT*PCLEHQDHRGP Trigger: AGGCCCACGATGATCTTGGTGCTCCAGGCAGGGCCAGGTCCCATGATCCACATTCCATGACAGTGTCGTGGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR CCA 72 bp | TCAAAGTTCCCTGGGCCCTTAGCCCTGGGTGCCATTTaGCACCAACTCTATAGTCTGGTGTCTGCTGCCACC | + |
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Preference number: 3 (lower is better) Translates to: SKFPGPLALGAI*HQLYSLVSAAT Trigger: GGTGGCAGCAGACACCAGACTATAGAGTTGGTGCCAAATGGCACCCAGGGCTAAGGGCCCAGGGAACTTTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR CCA 72 bp | TGTCATGGAATGTGGATCATGGGACCTGGCCCTGCCTaGAGCACCAAGATCATCGTGGGCCTTGAGCAGACT | + |
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Preference number: 3 (lower is better) Translates to: CHGMWIMGPGPA*STKIIVGLEQT Trigger: AGTCTGCTCAAGGCCCACGATGATCTTGGTGCTCCAGGCAGGGCCAGGTCCCATGATCCACATTCCATGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR-3UTR CAA 90 bp | ACCCACAGTCTGCTCACACACTTTATTAAGATGCATCTGGAACCACGACACTGTCCGTGGGCGGGTCCTTaGGCAGAGAAGCAGAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: THSLLTHFIKMHLEPRHCPWAGP*AEKQRL Trigger: CAGCCTCTGCTTCTCTGCCAAAGGACCCGCCCACGG...ACAGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGTGAGCAGACTGTGGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR CCA 72 bp | CCCACAGTCTGCTCACACACTTTATTAAGATGCATCTaGAACCACGACACTGTCATGGAATGTGGATCATGG | + |
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Preference number: 3 (lower is better) Translates to: PTVCSHTLLRCI*NHDTVMECGSW Trigger: CCATGATCCACATTCCATGACAGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGTGAGCAGACTGTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| 3UTR TCA 72 bp | CTAGCAACCATGCAAGGCTGGGAACCCCATCCTGTGTaGACACTGGAAGGTATATATGGATATAAAAAGTGT | + |
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Preference number: 3 (lower is better) Translates to: LATMQGWEPHPV*TLEGIYGYKKC Trigger: ACACTTTTTATATCCATATATACCTTCCAGTGTTCACACAGGATGGGGTTCCCAGCCTTGCATGGTTGCTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| CDS-3UTR TCA 90 bp | GCCTGGAGCACCAAGATCATCGTGGGCCTTGAGCAGACTGGGCCTGCCCCCAACGGCACTTGTTCTCCTTaGGGGCCCCAATGCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: AWSTKIIVGLEQTGPAPNGTCSP*GPQCSP Trigger: TGGGCTGCATTGGGGCCCTCAAGGAGAACAAGTGCC...GTTGGGGGCAGGCCCAGTCTGCTCAAGGCCCACGATGATCTTGGTGCTCCAGGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| CDS-3UTR TCA 90 bp | GAGCAGACTGGGCCTGCCCCCAACCTAGCAACCATGCAAGGCTGGGAACCCCATGGCACTTGTTCTCCTTaGGGGCCCCAATGCAGCCCA | + |
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Preference number: 4 (lower is better) Translates to: EQTGPAPNLATMQGWEPHGTCSP*GPQCSP Trigger: TGGGCTGCATTGGGGCCCTCAAGGAGAACAAGTGCC...ATGGGGTTCCCAGCCTTGCATGGTTGCTAGGTTGGGGGCAGGCCCAGTCTGCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| CDS-3UTR GCA 90 bp | GCCTGGAGCACCAAGATCATCGTGGGCCTTGAGCAGACTGGGCCTGCCCCCAACCCACGTTGCCCTGTGTaGCATACAGATGCAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: AWSTKIIVGLEQTGPAPNPRCPV*HTDAGP Trigger: AGGGCCTGCATCTGTATGGCACACAGGGCAACGTGG...GTTGGGGGCAGGCCCAGTCTGCTCAAGGCCCACGATGATCTTGGTGCTCCAGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| CDS-3UTR GCA 90 bp | CCTGCCTGGAGCACCAAGATCATCGTGGGCCTTGAGCAGACTGGGCCTGCCCCCTCTGCACCAGTGCCGTaGACAGTCCAAAGATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: PAWSTKIIVGLEQTGPAPSAPVP*TVQRCP Trigger: TGGGCATCTTTGGACTGTGCACGGCACTGGTGCAGA...GGGGGCAGGCCCAGTCTGCTCAAGGCCCACGATGATCTTGGTGCTCCAGGCAGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| CDS-3UTR GCA 90 bp | GTGTCTGCTGCCACCCAAGCAGAGTGCCCTCAGGTGCAGGGATGGATGCTGGGTCCACGTTGCCCTGTGTaGCATACAGATGCAGGCCCT | + |
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Preference number: 4 (lower is better) Translates to: VSAATQAECPQVQGWMLGPRCPV*HTDAGP Trigger: AGGGCCTGCATCTGTATGGCACACAGGGCAACGTGG...ACCCAGCATCCATCCCTGCACCTGAGGGCACTCTGCTTGGGTGGCAGCAGACAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| CDS-3UTR GCA 90 bp | GGGTGCTCTGGCCTCCAGCTCTTCCCCCTGCATTCAGCAGAACACCAGTCCTGCGTGAGGCCCAGAATCTaGACCAGTGCCGTGCACAGT | + |
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Preference number: 4 (lower is better) Translates to: GCSGLQLFPLHSAEHQSCVRPRI*TSAVHS Trigger: ACTGTGCACGGCACTGGTGCAGATTCTGGGCCTCAC...GCAGGACTGGTGTTCTGCTGAATGCAGGGGGAAGAGCTGGAGGCCAGAGCACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| CDS-3UTR GCA 90 bp | GGAATGTGGATCATGGGACCTGGCCCTGCCTGGAGCACCAAGATCATCGTGGGCTGGCAGCCAACCAGATaGCAACACCCAGGACACCAC | + |
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Preference number: 4 (lower is better) Translates to: GMWIMGPGPAWSTKIIVGWQPTR*QHPGHH Trigger: GTGGTGTCCTGGGTGTTGGCATCTGGTTGGCTGCCA...GCCCACGATGATCTTGGTGCTCCAGGCAGGGCCAGGTCCCATGATCCACATTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| CDS-3UTR GCA 90 bp | CAGACTGGGCCTGCCCCCAACCTAGCAACCATGCAAGGCTGGGAACCCCATCCTTCTGCACCAGTGCCGTaGACAGTCCAAAGATGCCCA | + |
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Preference number: 4 (lower is better) Translates to: QTGPAPNLATMQGWEPHPSAPVP*TVQRCP Trigger: TGGGCATCTTTGGACTGTGCACGGCACTGGTGCAGA...AGGATGGGGTTCCCAGCCTTGCATGGTTGCTAGGTTGGGGGCAGGCCCAGTCTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| CDS-3UTR TCA 90 bp | CCTGCCTGGAGCACCAAGATCATCGTGGGCCTTGAGCAGACTGGGCCTGCCCCCGCAGCACAAAGAAAGTaGGCAGTAGGCACTTGTTCT | + |
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Preference number: 4 (lower is better) Translates to: PAWSTKIIVGLEQTGPAPAAQRK*AVGTCS Trigger: AGAACAAGTGCCTACTGCTCACTTTCTTTGTGCTGC...GGGGGCAGGCCCAGTCTGCTCAAGGCCCACGATGATCTTGGTGCTCCAGGCAGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| CDS-3UTR CCA 90 bp | GACATCTTCCTTCCCGTGGGCGGGTCCTTTGGCAGAGAAGCAGAGGCTGTGAGAGCTAGCAGGTTCTCCTaGAGCCAGGCCTTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: DIFLPVGGSFGREAEAVRASRFS*SQAFTV Trigger: GACAGTGAAGGCCTGGCTCCAGGAGAACCTGCTAGC...TCTCACAGCCTCTGCTTCTCTGCCAAAGGACCCGCCCACGGGAAGGAAGATGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CCA 90 bp | CTTGAGCAGACTGGGCCTGCCCCCAACCTAGCAACCATGCAAGGCTGGGAACCCTCCGCCTTTACCACCTaGCAGTACATGGTCATAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LEQTGPAPNLATMQGWEPSAFTT*QYMVIA Trigger: CGCTATGACCATGTACTGCCAGGTGGTAAAGGCGGA...GGGTTCCCAGCCTTGCATGGTTGCTAGGTTGGGGGCAGGCCCAGTCTGCTCAAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR GCA 90 bp | GAGCAGACTGGGCCTGCCCCCAACCTAGCAACCATGCAAGGCTGGGAACCCCATCAGAATCTGCACCAGTaGCGTGCACAGTCCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EQTGPAPNLATMQGWEPHQNLHQ*RAQSKD Trigger: ATCTTTGGACTGTGCACGGCACTGGTGCAGATTCTG...ATGGGGTTCCCAGCCTTGCATGGTTGCTAGGTTGGGGGCAGGCCCAGTCTGCTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CCA 90 bp | GGGTGCTCTGGCCTCCAGCTCTTCCCCCTGCATTCAGCAGAACACCAGTCCTGCAGAGCACAGCAATGGTaGCTTCCAGCAGGAACACTA | + |
|
Preference number: 4 (lower is better) Translates to: GCSGLQLFPLHSAEHQSCRAQQW*LPAGTL Trigger: TAGTGTTCCTGCTGGAAGCCACCATTGCTGTGCTCT...GCAGGACTGGTGTTCTGCTGAATGCAGGGGGAAGAGCTGGAGGCCAGAGCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CCA 90 bp | CAGACTGGGCCTGCCCCCAACCTAGCAACCATGCAAGGCTGGGAACCCCATCCTAGAAGAGCACAGCAATaGTGGCTTCCAGCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: QTGPAPNLATMQGWEPHPRRAQQ*WLPAGT Trigger: TGTTCCTGCTGGAAGCCACCATTGCTGTGCTCTTCT...AGGATGGGGTTCCCAGCCTTGCATGGTTGCTAGGTTGGGGGCAGGCCCAGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CCA 90 bp | CACTGTCATGGAATGTGGATCATGGGACCTGGCCCTGCCTGGAGCACCAAGATCGCTAGCAGGTTCTCCTaGAGCCAGGCCTTCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: HCHGMWIMGPGPAWSTKIASRFS*SQAFTV Trigger: GACAGTGAAGGCCTGGCTCCAGGAGAACCTGCTAGC...GATCTTGGTGCTCCAGGCAGGGCCAGGTCCCATGATCCACATTCCATGACAGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR GCA 90 bp | GAACCACGACACTGTCATGGAATGTGGATCATGGGACCTGGCCCTGCCTGGAGCCAGAATCTGCACCAGTaGCGTGCACAGTCCAAAGAT | + |
|
Preference number: 4 (lower is better) Translates to: EPRHCHGMWIMGPGPAWSQNLHQ*RAQSKD Trigger: ATCTTTGGACTGTGCACGGCACTGGTGCAGATTCTG...GCTCCAGGCAGGGCCAGGTCCCATGATCCACATTCCATGACAGTGTCGTGGTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR GCA 90 bp | ATAAAAAGTGTCAAAGTTCCCTGGGCCCTTAGCCCTGGGTGCCATTTGGCACCATGGCAGCCAACCAGATaGCAACACCCAGGACACCAC | + |
|
Preference number: 4 (lower is better) Translates to: IKSVKVPWALSPGCHLAPWQPTR*QHPGHH Trigger: GTGGTGTCCTGGGTGTTGGCATCTGGTTGGCTGCCA...TGGTGCCAAATGGCACCCAGGGCTAAGGGCCCAGGGAACTTTGACACTTTTTAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CCA 90 bp | TGGAACCACGACACTGTCATGGAATGTGGATCATGGGACCTGGCCCTGCCTGGAAGAGCACAGCAATGGTaGCTTCCAGCAGGAACACTA | + |
|
Preference number: 4 (lower is better) Translates to: WNHDTVMECGSWDLALPGRAQQW*LPAGTL Trigger: TAGTGTTCCTGCTGGAAGCCACCATTGCTGTGCTCT...TCCAGGCAGGGCCAGGTCCCATGATCCACATTCCATGACAGTGTCGTGGTTCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CCA 90 bp | CCTGGGCCCTTAGCCCTGGGTGCCATTTGGCACCAACTCTATAGTCTGGTGTCTAGAAGAGCACAGCAATaGTGGCTTCCAGCAGGAACA | + |
|
Preference number: 4 (lower is better) Translates to: PGPLALGAIWHQLYSLVSRRAQQ*WLPAGT Trigger: TGTTCCTGCTGGAAGCCACCATTGCTGTGCTCTTCT...AGACACCAGACTATAGAGTTGGTGCCAAATGGCACCCAGGGCTAAGGGCCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR TCA 90 bp | CACTGTCATGGAATGTGGATCATGGGACCTGGCCCTGCCTGGAGCACCAAGATCGCAGCACAAAGAAAGTaGGCAGTAGGCACTTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HCHGMWIMGPGPAWSTKIAAQRK*AVGTCS Trigger: AGAACAAGTGCCTACTGCTCACTTTCTTTGTGCTGC...GATCTTGGTGCTCCAGGCAGGGCCAGGTCCCATGATCCACATTCCATGACAGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR TCA 90 bp | ATTAAGATGCATCTGGAACCACGACACTGTCATGGAATGTGGATCATGGGACCTTGCTCCAGGCATTGGTaGGGCCCACGTTGCCCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: IKMHLEPRHCHGMWIMGPCSRHW*GPRCPV Trigger: CACAGGGCAACGTGGGCCTCACCAATGCCTGGAGCA...AGGTCCCATGATCCACATTCCATGACAGTGTCGTGGTTCCAGATGCATCTTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CCA 90 bp | GATATAAAAAGTGTCAAAGTTCCCTGGGCCCTTAGCCCTGGGTGCCATTTGGCATCCGCCTTTACCACCTaGCAGTACATGGTCATAGCG | + |
|
Preference number: 4 (lower is better) Translates to: DIKSVKVPWALSPGCHLASAFTT*QYMVIA Trigger: CGCTATGACCATGTACTGCCAGGTGGTAAAGGCGGA...TGCCAAATGGCACCCAGGGCTAAGGGCCCAGGGAACTTTGACACTTTTTATATC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR GCA 90 bp | ACACACTTTATTAAGATGCATCTGGAACCACGACACTGTCATGGAATGTGGATCGTGAGGCCCAGAATCTaGACCAGTGCCGTGCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: THFIKMHLEPRHCHGMWIVRPRI*TSAVHS Trigger: ACTGTGCACGGCACTGGTGCAGATTCTGGGCCTCAC...GATCCACATTCCATGACAGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CCA 90 bp | GATATAAAAAGTGTCAAAGTTCCCTGGGCCCTTAGCCCTGGGTGCCATTTGGCACATCGGAAATCAGTCTaGATGATGCTCCAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: DIKSVKVPWALSPGCHLAHRKSV*MMLQAL Trigger: CAATGCCTGGAGCATCATCCAGACTGATTTCCGATG...TGCCAAATGGCACCCAGGGCTAAGGGCCCAGGGAACTTTGACACTTTTTATATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR GCA 90 bp | ACCCACAGTCTGCTCACACACTTTATTAAGATGCATCTGGAACCACGACACTGTTGCACAGTCCAAAGATaGCCACAGCTAGCAGGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: THSLLTHFIKMHLEPRHCCTVQR*PQLAGS Trigger: AGAACCTGCTAGCTGTGGGCATCTTTGGACTGTGCA...ACAGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGTGAGCAGACTGTGGGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CCA 90 bp | AGACCCACAGTCTGCTCACACACTTTATTAAGATGCATCTGGAACCACGACACTCATCGGAAATCAGTCTaGATGATGCTCCAGGCATTG | + |
|
Preference number: 4 (lower is better) Translates to: RPTVCSHTLLRCIWNHDTHRKSV*MMLQAL Trigger: CAATGCCTGGAGCATCATCCAGACTGATTTCCGATG...AGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGTGAGCAGACTGTGGGTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CCA 90 bp | ACACACTTTATTAAGATGCATCTGGAACCACGACACTGTCATGGAATGTGGATCATGAGGATGATAAGGTaGCAAAGTTTCCCTGTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: THFIKMHLEPRHCHGMWIMRMIR*QSFPVW Trigger: CCACACAGGGAAACTTTGCCACCTTATCATCCTCAT...GATCCACATTCCATGACAGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS GCA 90 bp | TGCTGCAGCGCCGAAAGGGGCCGCCGCGCGCAAAGCCTGGCTCCTTaGTCTCCGGAGAAGGGCTGCGCCGGTACGTGGATTCGTCCGTGC | + |
|
Preference number: 5 (lower is better) Translates to: CCSAERGRRAQSLAP*SPEKGCAGTWIRPC Trigger: GCACGGACGAATCCACGTACCGGCGCAGCCCTTCTCCGGAGAGCAAGGAGCCAGGCTTTGCGCGCGGCGGCCCCTTTCGGCGCTGCAGCA 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
||
| CDS CCA 90 bp | ATACAGGCTGCTGCAGCGCCGAAAGGGGCCGCCGCGCGCAAAGCCTaGCTCCTTGCTCTCCGGAGAAGGGCTGCGCCGGTACGTGGATTC | + |
|
Preference number: 5 (lower is better) Translates to: IQAAAAPKGAAARKA*LLALRRRAAPVRGF Trigger: GAATCCACGTACCGGCGCAGCCCTTCTCCGGAGAGCAAGGAGCCAGGCTTTGCGCGCGGCGGCCCCTTTCGGCGCTGCAGCAGCCTGTAT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
||
| CDS GCA 90 bp | GACCACATACTTGTTGCCCTTGGGCGTTGTATAGCGCGCCTGGGCTaGCTTGGGGCCCGGGTTCGAGTGCAGGCCGAAGAAGCCGCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: DHILVALGRCIARLG*LGARVRVQAEEAAA Trigger: GGCGGCGGCTTCTTCGGCCTGCACTCGAACCCGGGCCCCAAGGCAGCCCAGGCGCGCTATACAACGCCCAAGGGCAACAAGTATGTGGTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
||
| CDS CCA 90 bp | CATACTTGTTGCCCTTGGGCGTTGTATAGCGCGCCTGGGCTGCCTTaGGGCCCGGGTTCGAGTGCAGGCCGAAGAAGCCGCCGCCAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HTCCPWALYSAPGLP*GPGSSAGRRSRRQH Trigger: ATGCTGGCGGCGGCTTCTTCGGCCTGCACTCGAACCCGGGCCCCAAGGCAGCCCAGGCGCGCTATACAACGCCCAAGGGCAACAAGTATG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
||
| CDS-3UTR CAA 90 bp | GCCTGGAGCACCAAGATCATCGTGGGCCTTGAGCAGACTGGGCCTGCCCCCAACGCGAACATGAGGTACTaGACGCCCTGGAGGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: AWSTKIIVGLEQTGPAPNANMRY*TPWRQP Trigger: CGGCTGCCTCCAGGGCGTCAAGTACCTCATGTTCGC...GTTGGGGGCAGGCCCAGTCTGCTCAAGGCCCACGATGATCTTGGTGCTCCAGGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| CDS-3UTR CAA 90 bp | GGAATGTGGATCATGGGACCTGGCCCTGCCTGGAGCACCAAGATCATCGTGGGCGTGACGATGAGCAGGTaGGCAGCCGACAAGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: GMWIMGPGPAWSTKIIVGVTMSR*AADKDG Trigger: TCCATCCTTGTCGGCTGCCAACCTGCTCATCGTCAC...GCCCACGATGATCTTGGTGCTCCAGGCAGGGCCAGGTCCCATGATCCACATTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| CDS TCA 90 bp | GGCAGCCGCGCGCCATGCTGCAGCGCTTCAGCTCTAGAAGGAAGATaGAGGAGAGGTCTAGGTAGAAGACCACATACTTGTTGCCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: GSRAPCCSASALEGR*RRGLGRRPHTCCPW Trigger: CCAAGGGCAACAAGTATGTGGTCTTCTACCTAGACCTCTCCTTCATCTTCCTTCTAGAGCTGAAGCGCTGCAGCATGGCGCGCGGCTGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
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| CDS-3UTR CAA 90 bp | GAGCAGACTGGGCCTGCCCCCAACCTAGCAACCATGCAAGGCTGGGAACCCCATGCCCTTCTTCAGGTCTaGTTGGGCATAACTGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: EQTGPAPNLATMQGWEPHALLQV*LGITVN Trigger: ATTGACAGTTATGCCCAACAAGACCTGAAGAAGGGC...ATGGGGTTCCCAGCCTTGCATGGTTGCTAGGTTGGGGGCAGGCCCAGTCTGCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CAA 90 bp | GGACCTGGCCCTGCCTGGAGCACCAAGATCATCGTGGGCCTTGAGCAGACTGGGCTTCTTCAGGTCTTGTaGGGCATAACTGTCAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: GPGPAWSTKIIVGLEQTGLLQVL*GITVNL Trigger: AAGATTGACAGTTATGCCCAACAAGACCTGAAGAAG...CCCAGTCTGCTCAAGGCCCACGATGATCTTGGTGCTCCAGGCAGGGCCAGGTCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| CDS-3UTR CAA 90 bp | ACCCACAGTCTGCTCACACACTTTATTAAGATGCATCTGGAACCACGACACTGTGCGAACATGAGGTACTaGACGCCCTGGAGGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: THSLLTHFIKMHLEPRHCANMRY*TPWRQP Trigger: CGGCTGCCTCCAGGGCGTCAAGTACCTCATGTTCGC...ACAGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGTGAGCAGACTGTGGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CAA 90 bp | GGGCCCTTAGCCCTGGGTGCCATTTGGCACCAACTCTATAGTCTGGTGTCTGCTGCCCTTCTTCAGGTCTaGTTGGGCATAACTGTCAAT | + |
|
Preference number: 5 (lower is better) Translates to: GPLALGAIWHQLYSLVSAALLQV*LGITVN Trigger: ATTGACAGTTATGCCCAACAAGACCTGAAGAAGGGC...AGCAGACACCAGACTATAGAGTTGGTGCCAAATGGCACCCAGGGCTAAGGGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| CDS TCA 90 bp | GCGACTTCCACCAGGTACCAGGTTCATGTAACCCACAGCTATCACTaGACTCCAGACAGCAGGAGTCAGGCACACGAGTGGCATTGTATA | + |
|
Preference number: 5 (lower is better) Translates to: ATSTRYQVHVTHSYH*TPDSRSQAHEWHCI Trigger: TATACAATGCCACTCGTGTGCCTGACTCCTGCTGTCTGGAGTTCAGTGATAGCTGTGGGTTACATGAACCTGGTACCTGGTGGAAGTCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 ENSMUST00000239217.2 |
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| CDS-3UTR CAA 90 bp | GAACCACGACACTGTCATGGAATGTGGATCATGGGACCTGGCCCTGCCTGGAGCCTTCTTCAGGTCTTGTaGGGCATAACTGTCAATCTT | + |
|
Preference number: 5 (lower is better) Translates to: EPRHCHGMWIMGPGPAWSLLQVL*GITVNL Trigger: AAGATTGACAGTTATGCCCAACAAGACCTGAAGAAG...GCTCCAGGCAGGGCCAGGTCCCATGATCCACATTCCATGACAGTGTCGTGGTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
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| CDS-3UTR CAA 90 bp | ACCCACAGTCTGCTCACACACTTTATTAAGATGCATCTGGAACCACGACACTGTATGATGCTCCAGGCATaGGTGAGGCCCACGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: THSLLTHFIKMHLEPRHCMMLQA*VRPTLP Trigger: GGGCAACGTGGGCCTCACCAATGCCTGGAGCATCAT...ACAGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGTGAGCAGACTGTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CAA 90 bp | AGACCCACAGTCTGCTCACACACTTTATTAAGATGCATCTGGAACCACGACACTATGATGCTCCAGGCATaGGTGAGGCCCACGTTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: RPTVCSHTLLRCIWNHDTMMLQA*VRPTLP Trigger: GGGCAACGTGGGCCTCACCAATGCCTGGAGCATCAT...AGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGTGAGCAGACTGTGGGTCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CAA 90 bp | AGACCCACAGTCTGCTCACACACTTTATTAAGATGCATCTGGAACCACGACACTGTGACGATGAGCAGGTaGGCAGCCGACAAGGATGGA | + |
|
Preference number: 5 (lower is better) Translates to: RPTVCSHTLLRCIWNHDTVTMSR*AADKDG Trigger: TCCATCCTTGTCGGCTGCCAACCTGCTCATCGTCAC...AGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGTGAGCAGACTGTGGGTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CAA 90 bp | ATTAAGATGCATCTGGAACCACGACACTGTCATGGAATGTGGATCATGGGACCTGTGAGCAGTAGGCACTaGTTCTCCTTGAGGGCCCCA | + |
|
Preference number: 5 (lower is better) Translates to: IKMHLEPRHCHGMWIMGPVSSRH*FSLRAP Trigger: TGGGGCCCTCAAGGAGAACAAGTGCCTACTGCTCAC...AGGTCCCATGATCCACATTCCATGACAGTGTCGTGGTTCCAGATGCATCTTAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CAA 90 bp | ACCCACAGTCTGCTCACACACTTTATTAAGATGCATCTGGAACCACGACACTGTTTGGTGAGGCCCACGTaGCCCTGTGTGCCATACAGA | + |
|
Preference number: 5 (lower is better) Translates to: THSLLTHFIKMHLEPRHCLVRPT*PCVPYR Trigger: TCTGTATGGCACACAGGGCAACGTGGGCCTCACCAA...ACAGTGTCGTGGTTCCAGATGCATCTTAATAAAGTGTGTGAGCAGACTGTGGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CAA 90 bp | AGATGCATCTGGAACCACGACACTGTCATGGAATGTGGATCATGGGACCTGGCCGGCACACGAGTGGCATaGTATACCTCAAACCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: RCIWNHDTVMECGSWDLAGTRVA*YTSNQS Trigger: TGATTGGTTTGAGGTATACAATGCCACTCGTGTGCC...GGCCAGGTCCCATGATCCACATTCCATGACAGTGTCGTGGTTCCAGATGCATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS-3UTR CAA 90 bp | TTTATTAAGATGCATCTGGAACCACGACACTGTCATGGAATGTGGATCATGGGATTGGTGAGGCCCACGTaGCCCTGTGTGCCATACAGA | + |
|
Preference number: 5 (lower is better) Translates to: FIKMHLEPRHCHGMWIMGLVRPT*PCVPYR Trigger: TCTGTATGGCACACAGGGCAACGTGGGCCTCACCAA...TCCCATGATCCACATTCCATGACAGTGTCGTGGTTCCAGATGCATCTTAATAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS CCA 90 bp | CATAACTGTCAATCTTGTCACTGTAGGCAAAGAAGAGCACAGCAATaGTGGCTTCCAGCAGGAACACTAGCAGCAGCAGCACAAAGAAAG | + |
|
Preference number: 5 (lower is better) Translates to: HNCQSCHCRQRRAQQ*WLPAGTLAAAAQRK Trigger: CTTTCTTTGTGCTGCTGCTGCTAGTGTTCCTGCTGGAAGCCACCATTGCTGTGCTCTTCTTTGCCTACAGTGACAAGATTGACAGTTATG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 ENSMUST00000138092.8 ENSMUST00000146305.8 ENSMUST00000239217.2 |
||
| CDS-3UTR CAA 90 bp | ATTAAGATGCATCTGGAACCACGACACTGTCATGGAATGTGGATCATGGGACCTGGCACACGAGTGGCATaGTATACCTCAAACCAATCA | + |
|
Preference number: 5 (lower is better) Translates to: IKMHLEPRHCHGMWIMGPGTRVA*YTSNQS Trigger: TGATTGGTTTGAGGTATACAATGCCACTCGTGTGCC...AGGTCCCATGATCCACATTCCATGACAGTGTCGTGGTTCCAGATGCATCTTAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 |
||
| CDS GCA 72 bp | CCGCGTCCCCGGCGCCCGCGCGCCCATACAGGCTGCTaGAGCGCCGAAAGGGGCCGCCGCGCGCAAAGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: PRPRRPRAHTGC*SAERGRRAQSL Trigger: CAGGCTTTGCGCGCGGCGGCCCCTTTCGGCGCTGCAGCAGCCTGTATGGGCGCGCGGGCGCCGGGGACGCGG 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
||
| CDS CCA 72 bp | GCTGCAGCGCCGAAAGGGGCCGCCGCGCGCAAAGCCTaGCTCCTTGCTCTCCGGAGAAGGGCTGCGCCGGTA | + |
|
Preference number: 6 (lower is better) Translates to: AAAPKGAAARKA*LLALRRRAAPV Trigger: TACCGGCGCAGCCCTTCTCCGGAGAGCAAGGAGCCAGGCTTTGCGCGCGGCGGCCCCTTTCGGCGCTGCAGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
||
| CDS CAA 72 bp | CGCCGAAAGGGGCCGCCGCGCGCAAAGCCTGGCTCCTaGCTCTCCGGAGAAGGGCTGCGCCGGTACGTGGAT | + |
|
Preference number: 6 (lower is better) Translates to: RRKGPPRAKPGS*LSGEGLRRYVD Trigger: ATCCACGTACCGGCGCAGCCCTTCTCCGGAGAGCAAGGAGCCAGGCTTTGCGCGCGGCGGCCCCTTTCGGCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
||
| CDS CAA 90 bp | CTGCTGCAGCGCCGAAAGGGGCCGCCGCGCGCAAAGCCTGGCTCCTaGCTCTCCGGAGAAGGGCTGCGCCGGTACGTGGATTCGTCCGTG | + |
|
Preference number: 6 (lower is better) Translates to: LLQRRKGPPRAKPGS*LSGEGLRRYVDSSV Trigger: CACGGACGAATCCACGTACCGGCGCAGCCCTTCTCCGGAGAGCAAGGAGCCAGGCTTTGCGCGCGGCGGCCCCTTTCGGCGCTGCAGCAG 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
||
| CDS GCA 72 bp | GCCGAAAGGGGCCGCCGCGCGCAAAGCCTGGCTCCTTaGTCTCCGGAGAAGGGCTGCGCCGGTACGTGGATT | + |
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Preference number: 6 (lower is better) Translates to: AERGRRAQSLAP*SPEKGCAGTWI Trigger: AATCCACGTACCGGCGCAGCCCTTCTCCGGAGAGCAAGGAGCCAGGCTTTGCGCGCGGCGGCCCCTTTCGGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
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| CDS CCA 72 bp | TGCCCTTGGGCGTTGTATAGCGCGCCTGGGCTGCCTTaGGGCCCGGGTTCGAGTGCAGGCCGAAGAAGCCGC | + |
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Preference number: 6 (lower is better) Translates to: CPWALYSAPGLP*GPGSSAGRRSR Trigger: GCGGCTTCTTCGGCCTGCACTCGAACCCGGGCCCCAAGGCAGCCCAGGCGCGCTATACAACGCCCAAGGGCA 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
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| CDS GCA 72 bp | GCGCAAAGCCTGGCTCCTTGCTCTCCGGAGAAGGGCTaGGCCGGTACGTGGATTCGTCCGTGCTGGAGCGGC | + |
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Preference number: 6 (lower is better) Translates to: AQSLAPCSPEKG*AGTWIRPCWSG Trigger: GCCGCTCCAGCACGGACGAATCCACGTACCGGCGCAGCCCTTCTCCGGAGAGCAAGGAGCCAGGCTTTGCGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
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| CDS GCA 72 bp | CTTGTTGCCCTTGGGCGTTGTATAGCGCGCCTGGGCTaGCTTGGGGCCCGGGTTCGAGTGCAGGCCGAAGAA | + |
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Preference number: 6 (lower is better) Translates to: LVALGRCIARLG*LGARVRVQAEE Trigger: TTCTTCGGCCTGCACTCGAACCCGGGCCCCAAGGCAGCCCAGGCGCGCTATACAACGCCCAAGGGCAACAAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
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| CDS CAA 72 bp | CTAGGTAGAAGACCACATACTTGTTGCCCTTGGGCGTaGTATAGCGCGCCTGGGCTGCCTTGGGGCCCGGGT | + |
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Preference number: 6 (lower is better) Translates to: LGRRPHTCCPWA*YSAPGLPWGPG Trigger: ACCCGGGCCCCAAGGCAGCCCAGGCGCGCTATACAACGCCCAAGGGCAACAAGTATGTGGTCTTCTACCTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
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| CDS CAA 90 bp | AGGAGAGGTCTAGGTAGAAGACCACATACTTGTTGCCCTTGGGCGTaGTATAGCGCGCCTGGGCTGCCTTGGGGCCCGGGTTCGAGTGCA | + |
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Preference number: 6 (lower is better) Translates to: RRGLGRRPHTCCPWA*YSAPGLPWGPGSSA Trigger: TGCACTCGAACCCGGGCCCCAAGGCAGCCCAGGCGCGCTATACAACGCCCAAGGGCAACAAGTATGTGGTCTTCTACCTAGACCTCTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
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| CDS CCA 72 bp | AGAGGTCTAGGTAGAAGACCACATACTTGTTGCCCTTaGGCGTTGTATAGCGCGCCTGGGCTGCCTTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: RGLGRRPHTCCP*ALYSAPGLPWG Trigger: GCCCCAAGGCAGCCCAGGCGCGCTATACAACGCCCAAGGGCAACAAGTATGTGGTCTTCTACCTAGACCTCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
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| CDS CAA 72 bp | GTCTGGATGATGCTCCAGGCATTGGTGAGGCCCACGTaGCCCTGTGTGCCATACAGATGCAGGCCCTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VWMMLQALVRPT*PCVPYRCRPFF Trigger: GAAGAAGGGCCTGCATCTGTATGGCACACAGGGCAACGTGGGCCTCACCAATGCCTGGAGCATCATCCAGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 ENSMUST00000138092.8 ENSMUST00000146305.8 ENSMUST00000239217.2 |
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| CDS CAA 90 bp | GAAACTCCACAGCATCGGAAATCAGTCTGGATGATGCTCCAGGCATaGGTGAGGCCCACGTTGCCCTGTGTGCCATACAGATGCAGGCCC | + |
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Preference number: 6 (lower is better) Translates to: ETPQHRKSVWMMLQA*VRPTLPCVPYRCRP Trigger: GGGCCTGCATCTGTATGGCACACAGGGCAACGTGGGCCTCACCAATGCCTGGAGCATCATCCAGACTGATTTCCGATGCTGTGGAGTTTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 ENSMUST00000138092.8 ENSMUST00000146305.8 ENSMUST00000239217.2 |
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| CDS CAA 90 bp | CGGAAATCAGTCTGGATGATGCTCCAGGCATTGGTGAGGCCCACGTaGCCCTGTGTGCCATACAGATGCAGGCCCTTCTTCAGGTCTTGT | + |
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Preference number: 6 (lower is better) Translates to: RKSVWMMLQALVRPT*PCVPYRCRPFFRSC Trigger: ACAAGACCTGAAGAAGGGCCTGCATCTGTATGGCACACAGGGCAACGTGGGCCTCACCAATGCCTGGAGCATCATCCAGACTGATTTCCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 ENSMUST00000138092.8 ENSMUST00000146305.8 ENSMUST00000239217.2 |
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| CDS CAA 72 bp | CAGCATCGGAAATCAGTCTGGATGATGCTCCAGGCATaGGTGAGGCCCACGTTGCCCTGTGTGCCATACAGA | + |
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Preference number: 6 (lower is better) Translates to: QHRKSVWMMLQA*VRPTLPCVPYR Trigger: TCTGTATGGCACACAGGGCAACGTGGGCCTCACCAATGCCTGGAGCATCATCCAGACTGATTTCCGATGCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 ENSMUST00000138092.8 ENSMUST00000146305.8 ENSMUST00000239217.2 |
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| CDS TCA 72 bp | ACCAGGTACCAGGTTCATGTAACCCACAGCTATCACTaGACTCCAGACAGCAGGAGTCAGGCACACGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: TRYQVHVTHSYH*TPDSRSQAHEW Trigger: CCACTCGTGTGCCTGACTCCTGCTGTCTGGAGTTCAGTGATAGCTGTGGGTTACATGAACCTGGTACCTGGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 ENSMUST00000239217.2 |
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| CDS CAA 72 bp | ATGGCCATGACGAAGGTCCCGGTGACGATGAGCAGGTaGGCAGCCGACAAGGATGGAAATGAGGATGATAAG | + |
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Preference number: 6 (lower is better) Translates to: MAMTKVPVTMSR*AADKDGNEDDK Trigger: CTTATCATCCTCATTTCCATCCTTGTCGGCTGCCAACCTGCTCATCGTCACCGGGACCTTCGTCATGGCCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 ENSMUST00000138092.8 ENSMUST00000146305.8 ENSMUST00000239217.2 |
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| CDS TCA 72 bp | GCGCCATGCTGCAGCGCTTCAGCTCTAGAAGGAAGATaGAGGAGAGGTCTAGGTAGAAGACCACATACTTGT | + |
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Preference number: 6 (lower is better) Translates to: APCCSASALEGR*RRGLGRRPHTC Trigger: ACAAGTATGTGGTCTTCTACCTAGACCTCTCCTTCATCTTCCTTCTAGAGCTGAAGCGCTGCAGCATGGCGC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000239217.2 |
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| CDS CAA 90 bp | GTTGCCCTGTGTGCCATACAGATGCAGGCCCTTCTTCAGGTCTTGTaGGGCATAACTGTCAATCTTGTCACTGTAGGCAAAGAAGAGCAC | + |
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Preference number: 6 (lower is better) Translates to: VALCAIQMQALLQVL*GITVNLVTVGKEEH Trigger: GTGCTCTTCTTTGCCTACAGTGACAAGATTGACAGTTATGCCCAACAAGACCTGAAGAAGGGCCTGCATCTGTATGGCACACAGGGCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 ENSMUST00000138092.8 ENSMUST00000146305.8 ENSMUST00000239217.2 |
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| CDS CAA 90 bp | CACGTTGCCCTGTGTGCCATACAGATGCAGGCCCTTCTTCAGGTCTaGTTGGGCATAACTGTCAATCTTGTCACTGTAGGCAAAGAAGAG | + |
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Preference number: 6 (lower is better) Translates to: HVALCAIQMQALLQV*LGITVNLVTVGKEE Trigger: CTCTTCTTTGCCTACAGTGACAAGATTGACAGTTATGCCCAACAAGACCTGAAGAAGGGCCTGCATCTGTATGGCACACAGGGCAACGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 ENSMUST00000138092.8 ENSMUST00000146305.8 ENSMUST00000239217.2 |
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| CDS CAA 72 bp | CTGTGTGCCATACAGATGCAGGCCCTTCTTCAGGTCTaGTTGGGCATAACTGTCAATCTTGTCACTGTAGGC | + |
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Preference number: 6 (lower is better) Translates to: LCAIQMQALLQV*LGITVNLVTVG Trigger: GCCTACAGTGACAAGATTGACAGTTATGCCCAACAAGACCTGAAGAAGGGCCTGCATCTGTATGGCACACAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 ENSMUST00000138092.8 ENSMUST00000146305.8 ENSMUST00000239217.2 |
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| CDS CAA 72 bp | TGTGCCATACAGATGCAGGCCCTTCTTCAGGTCTTGTaGGGCATAACTGTCAATCTTGTCACTGTAGGCAAA | + |
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Preference number: 6 (lower is better) Translates to: CAIQMQALLQVL*GITVNLVTVGK Trigger: TTTGCCTACAGTGACAAGATTGACAGTTATGCCCAACAAGACCTGAAGAAGGGCCTGCATCTGTATGGCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000026585.14 ENSMUST00000117634.2 ENSMUST00000138092.8 ENSMUST00000146305.8 ENSMUST00000239217.2 |
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