Pregenerated sensors for TSPAN33 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000001763Ensembl transcript IDs: ENSMUST00000046750.14, ENSMUST00000115250.4
Found 107 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TGCGGTCCCGATCCGACCCCTAGGTTCCCTAGGCTCCCGCTGCTCTaGCCGCTGCACTCCCAGCCTCTCTGGAGGTGGAATTGTGCCAAC | + |
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Preference number: 1 (lower is better) Translates to: CGPDPTPRFPRLPLL*PLHSQPLWRWNCAN Trigger: GTTGGCACAATTCCACCTCCAGAGAGGCTGGGAGTGCAGCGGGCAGAGCAGCGGGAGCCTAGGGAACCTAGGGGTCGGATCGGGACCGCA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR CCA 90 bp | TTCCCTAGGCTCCCGCTGCTCTGCCCGCTGCACTCCCAGCCTCTCTaGAGGTGGAATTGTGCCAACTGGACTCCTGCAGGGCTGCCAGTA | + |
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Preference number: 1 (lower is better) Translates to: FPRLPLLCPLHSQPL*RWNCANWTPAGLPV Trigger: TACTGGCAGCCCTGCAGGAGTCCAGTTGGCACAATTCCACCTCCAGAGAGGCTGGGAGTGCAGCGGGCAGAGCAGCGGGAGCCTAGGGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR GCA 90 bp | CCACTGGGCCCTCATTTGGGGGCTGGAATCCAAATCTGCACTGGGTaGTCTCAGCACCCTCTGCTGCTGGTCCGTGAGATGCTCGTCGCC | + |
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Preference number: 1 (lower is better) Translates to: PLGPHLGAGIQICTG*SQHPLLLVREMLVA Trigger: GGCGACGAGCATCTCACGGACCAGCAGCAGAGGGTGCTGAGAGCACCCAGTGCAGATTTGGATTCCAGCCCCCAAATGAGGGCCCAGTGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR GCA 90 bp | GCACTCCCAGCCTCTCTGGAGGTGGAATTGTGCCAACTGGACTCCTaGAGGGCTGCCAGTATCTGTGCACAGCCAGGACTCCCTGGCAGC | + |
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Preference number: 1 (lower is better) Translates to: ALPASLEVELCQLDS*RAASICAQPGLPGS Trigger: GCTGCCAGGGAGTCCTGGCTGTGCACAGATACTGGCAGCCCTGCAGGAGTCCAGTTGGCACAATTCCACCTCCAGAGAGGCTGGGAGTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR GCA 90 bp | GCTGCTCTGCCCGCTGCACTCCCAGCCTCTCTGGAGGTGGAATTGTaGCAACTGGACTCCTGCAGGGCTGCCAGTATCTGTGCACAGCCA | + |
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Preference number: 1 (lower is better) Translates to: AALPAALPASLEVEL*QLDSCRAASICAQP Trigger: TGGCTGTGCACAGATACTGGCAGCCCTGCAGGAGTCCAGTTGGCACAATTCCACCTCCAGAGAGGCTGGGAGTGCAGCGGGCAGAGCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR GCA 90 bp | TGCTTCTTTCCACTGGGCCCTCATTTGGGGGCTGGAATCCAAATCTaGACTGGGTGCTCTCAGCACCCTCTGCTGCTGGTCCGTGAGATG | + |
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Preference number: 1 (lower is better) Translates to: CFFPLGPHLGAGIQI*TGCSQHPLLLVREM Trigger: CATCTCACGGACCAGCAGCAGAGGGTGCTGAGAGCACCCAGTGCAGATTTGGATTCCAGCCCCCAAATGAGGGCCCAGTGGAAAGAAGCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR GCA 90 bp | GGGGAGATGAGGCACATCTTTCGGAGACCTGAGCCATCTGTGTCCTaGCTTCTGGAGCTTGCTTCTTTCCACTGGGCCCTCATTTGGGGG | + |
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Preference number: 1 (lower is better) Translates to: GEMRHIFRRPEPSVS*LLELASFHWALIWG Trigger: CCCCCAAATGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACACAGATGGCTCAGGTCTCCGAAAGATGTGCCTCATCTCCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR CCA 90 bp | GCCTTCTGGAGCTTGCTTCTTTCCACTGGGCCCTCATTTGGGGGCTaGAATCCAAATCTGCACTGGGTGCTCTCAGCACCCTCTGCTGCT | + |
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Preference number: 1 (lower is better) Translates to: AFWSLLLSTGPSFGG*NPNLHWVLSAPSAA Trigger: AGCAGCAGAGGGTGCTGAGAGCACCCAGTGCAGATTTGGATTCCAGCCCCCAAATGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR CCA 90 bp | GTGTCCTGCCTTCTGGAGCTTGCTTCTTTCCACTGGGCCCTCATTTaGGGGCTGGAATCCAAATCTGCACTGGGTGCTCTCAGCACCCTC | + |
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Preference number: 1 (lower is better) Translates to: VSCLLELASFHWALI*GLESKSALGALSTL Trigger: GAGGGTGCTGAGAGCACCCAGTGCAGATTTGGATTCCAGCCCCCAAATGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR GCA 90 bp | CTGCCAGATTCCCGATTCTTACACTGTAGAAACACTGAGTTCTGGTaGAGGGGATGCGGGTGGGTGGTGGTGCCACTCCTCTGCCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: LPDSRFLHCRNTEFW*RGCGWVVVPLLCQV Trigger: AACTTGGCAGAGGAGTGGCACCACCACCCACCCGCATCCCCTGCACCAGAACTCAGTGTTTCTACAGTGTAAGAATCGGGAATCTGGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR CCA 90 bp | GTGGTGGTGCCACTCCTCTGCCAAGTTAAAGAAAACCCCACTTGCTaGGGCGGGAAGGCCAGACAGAGAGGAATTCAAGGGCATGTATGG | + |
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Preference number: 1 (lower is better) Translates to: VVVPLLCQVKENPTC*GGKARQRGIQGHVW Trigger: CCATACATGCCCTTGAATTCCTCTCTGTCTGGCCTTCCCGCCCCAGCAAGTGGGGTTTTCTTTAACTTGGCAGAGGAGTGGCACCACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR TCA 90 bp | ATGCTGAGGCTAGGATGGGGAGATGAGGCACATCTTTCGGAGACCTaGGCCATCTGTGTCCTGCCTTCTGGAGCTTGCTTCTTTCCACTG | + |
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Preference number: 1 (lower is better) Translates to: MLRLGWGDEAHLSET*AICVLPSGACFFPL Trigger: CAGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACACAGATGGCTCAGGTCTCCGAAAGATGTGCCTCATCTCCCCATCCTAGCCTCAGCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR TCA 90 bp | CCTTGTTTCCATGGAGACGAGGGAGGAGCAGGATATAGCTCACTCTaGCTACCTGGGAGTGCGGCTAGGCAAGCATTTGGTAAACATACC | + |
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Preference number: 1 (lower is better) Translates to: PCFHGDEGGAGYSSL*LPGSAARQAFGKHT Trigger: GGTATGTTTACCAAATGCTTGCCTAGCCGCACTCCCAGGTAGTCAGAGTGAGCTATATCCTGCTCCTCCCTCGTCTCCATGGAAACAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR GCA 90 bp | TTTTACAGAGCGGGTGAGGATGAATTTGGCTGCTGTTATACCCCTTaGCCTTGCAGCCTTGTTTCCATGGAGACGAGGGAGGAGCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: FYRAGEDEFGCCYTP*PCSLVSMETREEQD Trigger: ATCCTGCTCCTCCCTCGTCTCCATGGAAACAAGGCTGCAAGGGCAAGGGGTATAACAGCAGCCAAATTCATCCTCACCCGCTCTGTAAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR GCA 90 bp | CCACGGTTCCAAACATTTTACAGAGCGGGTGAGGATGAATTTGGCTaGTGTTATACCCCTTGCCCTTGCAGCCTTGTTTCCATGGAGACG | + |
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Preference number: 1 (lower is better) Translates to: PRFQTFYRAGEDEFG*CYTPCPCSLVSMET Trigger: CGTCTCCATGGAAACAAGGCTGCAAGGGCAAGGGGTATAACAGCAGCCAAATTCATCCTCACCCGCTCTGTAAAATGTTTGGAACCGTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR GCA 90 bp | CTAGTAATCCTACAGCTTTCTGTGCCGCTGCAGTTTCCACACCTCTaGCCAGAGGAAACTAAAAACACAAACTCAAATGTTCAAGGTTAC | + |
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Preference number: 1 (lower is better) Translates to: LVILQLSVPLQFPHL*PEETKNTNSNVQGY Trigger: GTAACCTTGAACATTTGAGTTTGTGTTTTTAGTTTCCTCTGGGCAGAGGTGTGGAAACTGCAGCGGCACAGAAAGCTGTAGGATTACTAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR CAA 90 bp | CCCGCTGCTCTGCCCGCTGCACTCCCAGCCTCTCTGGAGGTGGAATaGTGCCAACTGGACTCCTGCAGGGCTGCCAGTATCTGTGCACAG | + |
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Preference number: 2 (lower is better) Translates to: PAALPAALPASLEVE*CQLDSCRAASICAQ Trigger: CTGTGCACAGATACTGGCAGCCCTGCAGGAGTCCAGTTGGCACAATTCCACCTCCAGAGAGGCTGGGAGTGCAGCGGGCAGAGCAGCGGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR GCA 90 bp | TCCCGCTGCTCTGCCCGCTGCACTCCCAGCCTCTCTGGAGGTGGAATTGTGCCACTGCCTTCTGGAGCTTaGTTCTTTCCACTGGGCCCT | + |
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Preference number: 2 (lower is better) Translates to: SRCSARCTPSLSGGGIVPLPSGA*FFPLGP Trigger: AGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAG...TGGCACAATTCCACCTCCAGAGAGGCTGGGAGTGCAGCGGGCAGAGCAGCGGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR CCA 90 bp | TCCCGCTGCTCTGCCCGCTGCACTCCCAGCCTCTCTGGAGGTGGAATTGTGCCACACTGGGCCCTCATTTaGGGGCTGGAATCCAAATCT | + |
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Preference number: 2 (lower is better) Translates to: SRCSARCTPSLSGGGIVPHWALI*GLESKS Trigger: AGATTTGGATTCCAGCCCCCAAATGAGGGCCCAGTG...TGGCACAATTCCACCTCCAGAGAGGCTGGGAGTGCAGCGGGCAGAGCAGCGGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR TCA 90 bp | CTCTGCCCGCTGCACTCCCAGCCTCTCTGGAGGTGGAATTGTGCCAACTGGACTCATCTTTCGGAGACCTaGGCCATCTGTGTCCTGCCT | + |
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Preference number: 2 (lower is better) Translates to: LCPLHSQPLWRWNCANWTHLSET*AICVLP Trigger: AGGCAGGACACAGATGGCTCAGGTCTCCGAAAGATG...AGTCCAGTTGGCACAATTCCACCTCCAGAGAGGCTGGGAGTGCAGCGGGCAGAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR GCA 90 bp | AACATACCCCCTTCACTCCTATCCCCCATGTGCCCTGCGGTCCCGATCCGACCCGAGCCATCTGTGTCCTaGCTTCTGGAGCTTGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: NIPPSLLSPMCPAVPIRPEPSVS*LLELAS Trigger: AGAAGCAAGCTCCAGAAGGCAGGACACAGATGGCTC...GGGTCGGATCGGGACCGCAGGGCACATGGGGGATAGGAGTGAAGGGGGTATGTT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGCAGGATATAGCTCACTCTGACTACCTGGGAGTGCGGCTAGGCAAGCATGGACTCCTGCAGGGCTaGCAGTATCTGTGCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: EEQDIAHSDYLGVRLGKHGLLQG*QYLCTA Trigger: GGCTGTGCACAGATACTGGCAGCCCTGCAGGAGTCC...ATGCTTGCCTAGCCGCACTCCCAGGTAGTCAGAGTGAGCTATATCCTGCTCCTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR CAA 90 bp | TGTGTCCTGCCTTCTGGAGCTTGCTTCTTTCCACTGGGCCCTCATTaGGGGGCTGGAATCCAAATCTGCACTGGGTGCTCTCAGCACCCT | + |
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Preference number: 2 (lower is better) Translates to: CVLPSGACFFPLGPH*GAGIQICTGCSQHP Trigger: AGGGTGCTGAGAGCACCCAGTGCAGATTTGGATTCCAGCCCCCAAATGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR GCA 90 bp | GCTGCTGTTATACCCCTTGCCCTTGCAGCCTTGTTTCCATGGAGACGAGGGAGGAGCTTTCTGTGCCGCTaGAGTTTCCACACCTCTGCC | + |
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Preference number: 2 (lower is better) Translates to: AAVIPLALAALFPWRRGRSFLCR*SFHTSA Trigger: GGCAGAGGTGTGGAAACTGCAGCGGCACAGAAAGCT...CCTCCCTCGTCTCCATGGAAACAAGGCTGCAAGGGCAAGGGGTATAACAGCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGGATATAGCTCACTCTGACTACCTGGGAGTGCGGCTAGGCAAGCATTTGGGACTCCTGCAGGGCTaGCAGTATCTGTGCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: EQDIAHSDYLGVRLGKHLGLLQG*QYLCTA Trigger: GGCTGTGCACAGATACTGGCAGCCCTGCAGGAGTCC...CAAATGCTTGCCTAGCCGCACTCCCAGGTAGTCAGAGTGAGCTATATCCTGCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR GCA 90 bp | TGGGGCGGGAAGGCCAGACAGAGAGGAATTCAAGGGCATGTATGGCTTAGTCCGTCCTACAGCTTTCTGTaGCGCTGCAGTTTCCACACC | + |
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Preference number: 2 (lower is better) Translates to: WGGKARQRGIQGHVWLSPSYSFL*RCSFHT Trigger: GGTGTGGAAACTGCAGCGGCACAGAAAGCTGTAGGA...CGGACTAAGCCATACATGCCCTTGAATTCCTCTCTGTCTGGCCTTCCCGCCCCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR CCA 90 bp | TCTTACACTGTAGAAACACTGAGTTCTGGTGCAGGGGATGCGGGTGGGTGGTGGCACTCCCAGCCTCTCTaGAGGTGGAATTGTGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: SYTVETLSSGAGDAGGWWHSQPL*RWNCAN Trigger: GTTGGCACAATTCCACCTCCAGAGAGGCTGGGAGTG...CCACCACCCACCCGCATCCCCTGCACCAGAACTCAGTGTTTCTACAGTGTAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR GCA 90 bp | GAGGAGCAGGATATAGCTCACTCTGACTACCTGGGAGTGCGGCTAGGCAAGCATGCTGGAATCCAAATCTaGACTGGGTGCTCTCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: EEQDIAHSDYLGVRLGKHAGIQI*TGCSQH Trigger: GTGCTGAGAGCACCCAGTGCAGATTTGGATTCCAGC...ATGCTTGCCTAGCCGCACTCCCAGGTAGTCAGAGTGAGCTATATCCTGCTCCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR CCA 90 bp | GATTCCCGATTCTTACACTGTAGAAACACTGAGTTCTGGTGCAGGGGATGCGGGGCAGCCTTGTTTCCATaGAGACGAGGGAGGAGCAGG | + |
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Preference number: 2 (lower is better) Translates to: DSRFLHCRNTEFWCRGCGAALFP*RRGRSR Trigger: CCTGCTCCTCCCTCGTCTCCATGGAAACAAGGCTGC...CCCGCATCCCCTGCACCAGAACTCAGTGTTTCTACAGTGTAAGAATCGGGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR CAA 90 bp | ACATCTTTCGGAGACCTGAGCCATCTGTGTCCTGCCTTCTGGAGCTaGCTTCTTTCCACTGGGCCCTCATTTGGGGGCTGGAATCCAAAT | + |
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Preference number: 2 (lower is better) Translates to: TSFGDLSHLCPAFWS*LLSTGPSFGGWNPN Trigger: ATTTGGATTCCAGCCCCCAAATGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACACAGATGGCTCAGGTCTCCGAAAGATGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR CCA 90 bp | GAGGAGCAGGATATAGCTCACTCTGACTACCTGGGAGTGCGGCTAGGCAAGCATCTGTGTCCTGCCTTCTaGAGCTTGCTTCTTTCCACT | + |
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Preference number: 2 (lower is better) Translates to: EEQDIAHSDYLGVRLGKHLCPAF*SLLLST Trigger: AGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACACAG...ATGCTTGCCTAGCCGCACTCCCAGGTAGTCAGAGTGAGCTATATCCTGCTCCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR GCA 90 bp | GATTCCCGATTCTTACACTGTAGAAACACTGAGTTCTGGTGCAGGGGATGCGGGGAGCCATCTGTGTCCTaGCTTCTGGAGCTTGCTTCT | + |
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Preference number: 2 (lower is better) Translates to: DSRFLHCRNTEFWCRGCGEPSVS*LLELAS Trigger: AGAAGCAAGCTCCAGAAGGCAGGACACAGATGGCTC...CCCGCATCCCCTGCACCAGAACTCAGTGTTTCTACAGTGTAAGAATCGGGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR CCA 90 bp | GAGCAGGATATAGCTCACTCTGACTACCTGGGAGTGCGGCTAGGCAAGCATTTGCTGTGTCCTGCCTTCTaGAGCTTGCTTCTTTCCACT | + |
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Preference number: 2 (lower is better) Translates to: EQDIAHSDYLGVRLGKHLLCPAF*SLLLST Trigger: AGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACACAG...CAAATGCTTGCCTAGCCGCACTCCCAGGTAGTCAGAGTGAGCTATATCCTGCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR CAA 90 bp | AGGGACCACGGTTCCAAACATTTTACAGAGCGGGTGAGGATGAATTaGGCTGCTGTTATACCCCTTGCCCTTGCAGCCTTGTTTCCATGG | + |
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Preference number: 2 (lower is better) Translates to: RDHGSKHFTERVRMN*AAVIPLALAALFPW Trigger: CCATGGAAACAAGGCTGCAAGGGCAAGGGGTATAACAGCAGCCAAATTCATCCTCACCCGCTCTGTAAAATGTTTGGAACCGTGGTCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR CCA 90 bp | GATATAGCTCACTCTGACTACCTGGGAGTGCGGCTAGGCAAGCATTTGGTAAACCAGCCTCTCTGGAGGTaGAATTGTGCCAACTGGACT | + |
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Preference number: 2 (lower is better) Translates to: DIAHSDYLGVRLGKHLVNQPLWR*NCANWT Trigger: AGTCCAGTTGGCACAATTCCACCTCCAGAGAGGCTG...GTTTACCAAATGCTTGCCTAGCCGCACTCCCAGGTAGTCAGAGTGAGCTATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR CCA 90 bp | TCAGCAGCAGCCCTAACAGAGCTGTCTGTTGTGCCTCAGTATGCAGCTAGTAATATGCTGAGGCTAGGATaGGGAGATGAGGCACATCTT | + |
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Preference number: 2 (lower is better) Translates to: SAAALTELSVVPQYAASNMLRLG*GDEAHL Trigger: AAGATGTGCCTCATCTCCCCATCCTAGCCTCAGCAT...ATTACTAGCTGCATACTGAGGCACAACAGACAGCTCTGTTAGGGCTGCTGCTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR GCA 90 bp | TTTCTGCCAGATTCCCGATTCTTACACTGTAGAAACACTGAGTTCTGGTGCAGGTATACCCCTTGCCCTTaGAGCCTTGTTTCCATGGAG | + |
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Preference number: 2 (lower is better) Translates to: FLPDSRFLHCRNTEFWCRYTPCP*SLVSME Trigger: CTCCATGGAAACAAGGCTGCAAGGGCAAGGGGTATA...CCTGCACCAGAACTCAGTGTTTCTACAGTGTAAGAATCGGGAATCTGGCAGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR TCA 90 bp | GATATAGCTCACTCTGACTACCTGGGAGTGCGGCTAGGCAAGCATTTGGTAAACAGGTTACAAACAGCATaGAATAAACCTCGGACAATG | + |
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Preference number: 2 (lower is better) Translates to: DIAHSDYLGVRLGKHLVNRLQTA*NKPRTM Trigger: CATTGTCCGAGGTTTATTTCATGCTGTTTGTAACCT...GTTTACCAAATGCTTGCCTAGCCGCACTCCCAGGTAGTCAGAGTGAGCTATATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR CCA 90 bp | CCAGAGGAAACTAAAAACACAAACTCAAATGTTCAAGGTTACAAACAGCATGAAATGCTGAGGCTAGGATaGGGAGATGAGGCACATCTT | + |
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Preference number: 2 (lower is better) Translates to: PEETKNTNSNVQGYKQHEMLRLG*GDEAHL Trigger: AAGATGTGCCTCATCTCCCCATCCTAGCCTCAGCAT...TTCATGCTGTTTGTAACCTTGAACATTTGAGTTTGTGTTTTTAGTTTCCTCTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR TCA 90 bp | TCAACAAACTTTTATTGCCATTTCTGCCAGATTCCCGATTCTTACACTGTAGAAAGGTTACAAACAGCATaGAATAAACCTCGGACAATG | + |
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Preference number: 2 (lower is better) Translates to: STNFYCHFCQIPDSYTVERLQTA*NKPRTM Trigger: CATTGTCCGAGGTTTATTTCATGCTGTTTGTAACCT...TTCTACAGTGTAAGAATCGGGAATCTGGCAGAAATGGCAATAAAAGTTTGTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR CCA 72 bp | CTCCCGCTGCTCTGCCCGCTGCACTCCCAGCCTCTCTaGAGGTGGAATTGTGCCAACTGGACTCCTGCAGGG | + |
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Preference number: 3 (lower is better) Translates to: LPLLCPLHSQPL*RWNCANWTPAG Trigger: CCCTGCAGGAGTCCAGTTGGCACAATTCCACCTCCAGAGAGGCTGGGAGTGCAGCGGGCAGAGCAGCGGGAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR CCA 72 bp | CTGCTCTGCCCGCTGCACTCCCAGCCTCTCTGGAGGTaGAATTGTGCCAACTGGACTCCTGCAGGGCTGCCA | + |
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Preference number: 3 (lower is better) Translates to: LLCPLHSQPLWR*NCANWTPAGLP Trigger: TGGCAGCCCTGCAGGAGTCCAGTTGGCACAATTCCACCTCCAGAGAGGCTGGGAGTGCAGCGGGCAGAGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR-3UTR CAA 90 bp | TCCCGCTGCTCTGCCCGCTGCACTCCCAGCCTCTCTGGAGGTGGAATTGTGCCACCTGCCTTCTGGAGCTaGCTTCTTTCCACTGGGCCC | + |
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Preference number: 3 (lower is better) Translates to: SRCSARCTPSLSGGGIVPPAFWS*LLSTGP Trigger: GGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAGG...TGGCACAATTCCACCTCCAGAGAGGCTGGGAGTGCAGCGGGCAGAGCAGCGGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| 3UTR TCA 72 bp | CACTGGGTGCTCTCAGCACCCTCTGCTGCTGGTCCGTaGGATGCTCGTCGCCATGGTAAGGAGGCGCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: HWVLSAPSAAGP*DARRHGKEAQE Trigger: TTCCTGCGCCTCCTTACCATGGCGACGAGCATCTCACGGACCAGCAGCAGAGGGTGCTGAGAGCACCCAGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR GCA 72 bp | GCCTCTCTGGAGGTGGAATTGTGCCAACTGGACTCCTaGAGGGCTGCCAGTATCTGTGCACAGCCAGGACTC | + |
|
Preference number: 3 (lower is better) Translates to: ASLEVELCQLDS*RAASICAQPGL Trigger: GAGTCCTGGCTGTGCACAGATACTGGCAGCCCTGCAGGAGTCCAGTTGGCACAATTCCACCTCCAGAGAGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR CCA 72 bp | CACTCCCAGCCTCTCTGGAGGTGGAATTGTGCCAACTaGACTCCTGCAGGGCTGCCAGTATCTGTGCACAGC | + |
|
Preference number: 3 (lower is better) Translates to: HSQPLWRWNCAN*TPAGLPVSVHS Trigger: GCTGTGCACAGATACTGGCAGCCCTGCAGGAGTCCAGTTGGCACAATTCCACCTCCAGAGAGGCTGGGAGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR-3UTR CAA 90 bp | GCTGCTGTTATACCCCTTGCCCTTGCAGCCTTGTTTCCATGGAGACGAGGGAGGCCACTGGGCCCTCATTaGGGGGCTGGAATCCAAATC | + |
|
Preference number: 3 (lower is better) Translates to: AAVIPLALAALFPWRRGRPLGPH*GAGIQI Trigger: GATTTGGATTCCAGCCCCCAAATGAGGGCCCAGTGG...CCTCCCTCGTCTCCATGGAAACAAGGCTGCAAGGGCAAGGGGTATAACAGCAGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR-3UTR CAA 90 bp | TCTTACACTGTAGAAACACTGAGTTCTGGTGCAGGGGATGCGGGTGGGTGGTGGCCTGCCTTCTGGAGCTaGCTTCTTTCCACTGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: SYTVETLSSGAGDAGGWWPAFWS*LLSTGP Trigger: GGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAGG...CCACCACCCACCCGCATCCCCTGCACCAGAACTCAGTGTTTCTACAGTGTAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR GCA 72 bp | CCTCATTTGGGGGCTGGAATCCAAATCTGCACTGGGTaGTCTCAGCACCCTCTGCTGCTGGTCCGTGAGATG | + |
|
Preference number: 3 (lower is better) Translates to: PHLGAGIQICTG*SQHPLLLVREM Trigger: CATCTCACGGACCAGCAGCAGAGGGTGCTGAGAGCACCCAGTGCAGATTTGGATTCCAGCCCCCAAATGAGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR-3UTR CAA 90 bp | TCTTACACTGTAGAAACACTGAGTTCTGGTGCAGGGGATGCGGGTGGGTGGTGGCCACTGGGCCCTCATTaGGGGGCTGGAATCCAAATC | + |
|
Preference number: 3 (lower is better) Translates to: SYTVETLSSGAGDAGGWWPLGPH*GAGIQI Trigger: GATTTGGATTCCAGCCCCCAAATGAGGGCCCAGTGG...CCACCACCCACCCGCATCCCCTGCACCAGAACTCAGTGTTTCTACAGTGTAAGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR GCA 72 bp | AGGCACATCTTTCGGAGACCTGAGCCATCTGTGTCCTaGCTTCTGGAGCTTGCTTCTTTCCACTGGGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: RHIFRRPEPSVS*LLELASFHWAL Trigger: GAGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACACAGATGGCTCAGGTCTCCGAAAGATGTGCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR TCA 72 bp | CTAGGATGGGGAGATGAGGCACATCTTTCGGAGACCTaGGCCATCTGTGTCCTGCCTTCTGGAGCTTGCTTC | + |
|
Preference number: 3 (lower is better) Translates to: LGWGDEAHLSET*AICVLPSGACF Trigger: GAAGCAAGCTCCAGAAGGCAGGACACAGATGGCTCAGGTCTCCGAAAGATGTGCCTCATCTCCCCATCCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR TCA 72 bp | CATGGAGACGAGGGAGGAGCAGGATATAGCTCACTCTaGCTACCTGGGAGTGCGGCTAGGCAAGCATTTGGT | + |
|
Preference number: 3 (lower is better) Translates to: HGDEGGAGYSSL*LPGSAARQAFG Trigger: ACCAAATGCTTGCCTAGCCGCACTCCCAGGTAGTCAGAGTGAGCTATATCCTGCTCCTCCCTCGTCTCCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR CCA 72 bp | CTTCTGGAGCTTGCTTCTTTCCACTGGGCCCTCATTTaGGGGCTGGAATCCAAATCTGCACTGGGTGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: LLELASFHWALI*GLESKSALGAL Trigger: GAGAGCACCCAGTGCAGATTTGGATTCCAGCCCCCAAATGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR CCA 72 bp | CCACTCCTCTGCCAAGTTAAAGAAAACCCCACTTGCTaGGGCGGGAAGGCCAGACAGAGAGGAATTCAAGGG | + |
|
Preference number: 3 (lower is better) Translates to: PLLCQVKENPTC*GGKARQRGIQG Trigger: CCCTTGAATTCCTCTCTGTCTGGCCTTCCCGCCCCAGCAAGTGGGGTTTTCTTTAACTTGGCAGAGGAGTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR-3UTR CAA 90 bp | GATTCCCGATTCTTACACTGTAGAAACACTGAGTTCTGGTGCAGGGGATGCGGGCTTGCCCTTGCAGCCTaGTTTCCATGGAGACGAGGG | + |
|
Preference number: 3 (lower is better) Translates to: DSRFLHCRNTEFWCRGCGLALAA*FPWRRG Trigger: CCCTCGTCTCCATGGAAACAAGGCTGCAAGGGCAAG...CCCGCATCCCCTGCACCAGAACTCAGTGTTTCTACAGTGTAAGAATCGGGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR-3UTR CAA 90 bp | GATTCCCGATTCTTACACTGTAGAAACACTGAGTTCTGGTGCAGGGGATGCGGGTCTCTGGAGGTGGAATaGTGCCAACTGGACTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: DSRFLHCRNTEFWCRGCGSLEVE*CQLDSC Trigger: GCAGGAGTCCAGTTGGCACAATTCCACCTCCAGAGA...CCCGCATCCCCTGCACCAGAACTCAGTGTTTCTACAGTGTAAGAATCGGGAATC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR GCA 72 bp | CTACAGCTTTCTGTGCCGCTGCAGTTTCCACACCTCTaGCCAGAGGAAACTAAAAACACAAACTCAAATGTT | + |
|
Preference number: 3 (lower is better) Translates to: LQLSVPLQFPHL*PEETKNTNSNV Trigger: AACATTTGAGTTTGTGTTTTTAGTTTCCTCTGGGCAGAGGTGTGGAAACTGCAGCGGCACAGAAAGCTGTAG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR TCA 72 bp | AAACACAAACTCAAATGTTCAAGGTTACAAACAGCATaGAATAAACCTCGGACAATGCTGAGGCTAGGATGG | + |
|
Preference number: 3 (lower is better) Translates to: KHKLKCSRLQTA*NKPRTMLRLGW Trigger: CCATCCTAGCCTCAGCATTGTCCGAGGTTTATTTCATGCTGTTTGTAACCTTGAACATTTGAGTTTGTGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR CAA 72 bp | CTGCCCGCTGCACTCCCAGCCTCTCTGGAGGTGGAATaGTGCCAACTGGACTCCTGCAGGGCTGCCAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: LPAALPASLEVE*CQLDSCRAASI Trigger: GATACTGGCAGCCCTGCAGGAGTCCAGTTGGCACAATTCCACCTCCAGAGAGGCTGGGAGTGCAGCGGGCAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR CCA 90 bp | AACATACCCCCTTCACTCCTATCCCCCATGTGCCCTGCGGTCCCGATCCGACCCCTGCCTGGTTGGGGGTaGGCAAGCAACAGGAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: NIPPSLLSPMCPAVPIRPLPGWG*ASNRNK Trigger: CTTATTCCTGTTGCTTGCCCACCCCCAACCAGGCAG...GGGTCGGATCGGGACCGCAGGGCACATGGGGGATAGGAGTGAAGGGGGTATGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR CAA 72 bp | GGAGACCTGAGCCATCTGTGTCCTGCCTTCTGGAGCTaGCTTCTTTCCACTGGGCCCTCATTTGGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: GDLSHLCPAFWS*LLSTGPSFGGW Trigger: CCAGCCCCCAAATGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACACAGATGGCTCAGGTCTCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR CCA 90 bp | TCCCGCTGCTCTGCCCGCTGCACTCCCAGCCTCTCTGGAGGTGGAATTGTGCCAAGAGCCTGCATACCTTaGCCACACATCGTGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: SRCSARCTPSLSGGGIVPRACIP*PHIVLI Trigger: GATCAACACGATGTGTGGCCAAGGTATGCAGGCTCT...TGGCACAATTCCACCTCCAGAGAGGCTGGGAGTGCAGCGGGCAGAGCAGCGGGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR TCA 90 bp | TGGGGCGGGAAGGCCAGACAGAGAGGAATTCAAGGGCATGTATGGCTTAGTCCGATTTCACCAGCGGGCTaGCGAAGGAGAACTCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: WGGKARQRGIQGHVWLSPISPAG*RRRTRP Trigger: GGGACGAGTTCTCCTTCGTCAGCCCGCTGGTGAAAT...CGGACTAAGCCATACATGCCCTTGAATTCCTCTCTGTCTGGCCTTCCCGCCCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR TCA 90 bp | TCTTACACTGTAGAAACACTGAGTTCTGGTGCAGGGGATGCGGGTGGGTGGTGGCCCCCGAGCCTTGTCTaGGAAGACGAAGCCCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SYTVETLSSGAGDAGGWWPPSLV*EDEAQD Trigger: ATCCTGGGCTTCGTCTTCTCAGACAAGGCTCGGGGG...CCACCACCCACCCGCATCCCCTGCACCAGAACTCAGTGTTTCTACAGTGTAAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR CCA 90 bp | AGGCACATCTTTCGGAGACCTGAGCCATCTGTGTCCTGCCTTCTGGAGCTTGCTAGGATTCCCACCAGCTaGGGGATGGCCAGGCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: RHIFRRPEPSVSCLLELARIPTS*GMARPS Trigger: ACTAGGCCTGGCCATCCCCCAGCTGGTGGGAATCCT...AGCAAGCTCCAGAAGGCAGGACACAGATGGCTCAGGTCTCCGAAAGATGTGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR CCA 90 bp | TCTTACACTGTAGAAACACTGAGTTCTGGTGCAGGGGATGCGGGTGGGTGGTGGAGGATTCCCACCAGCTaGGGGATGGCCAGGCCTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SYTVETLSSGAGDAGGWWRIPTS*GMARPS Trigger: ACTAGGCCTGGCCATCCCCCAGCTGGTGGGAATCCT...CCACCACCCACCCGCATCCCCTGCACCAGAACTCAGTGTTTCTACAGTGTAAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR TCA 90 bp | AGCCATCTGTGTCCTGCCTTCTGGAGCTTGCTTCTTTCCACTGGGCCCTCATTTGGCCACACATCGTGTTaGTCACTGCCTGGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: SHLCPAFWSLLLSTGPSFGHTSC*SLPGWG Trigger: CCCCCAACCAGGCAGTGATCAACACGATGTGTGGCC...AAATGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACACAGATGGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR GCA 90 bp | GAGGAGCAGGATATAGCTCACTCTGACTACCTGGGAGTGCGGCTAGGCAAGCATATGCCAGCAGCCAGCTaGAGCAGGAACACGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: EEQDIAHSDYLGVRLGKHMPAAS*SRNTMV Trigger: CACCATCGTGTTCCTGCTGCAGCTGGCTGCTGGCAT...ATGCTTGCCTAGCCGCACTCCCAGGTAGTCAGAGTGAGCTATATCCTGCTCCTC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR GCA 90 bp | AGACCTGAGCCATCTGTGTCCTGCCTTCTGGAGCTTGCTTCTTTCCACTGGGCCCATCGTGTTGATCACTaGCTGGTTGGGGGTGGGCAA | + |
|
Preference number: 4 (lower is better) Translates to: RPEPSVSCLLELASFHWAHRVDH*LVGGGQ Trigger: TTGCCCACCCCCAACCAGGCAGTGATCAACACGATG...GGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACACAGATGGCTCAGGTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR GCA 90 bp | CTGAGCCATCTGTGTCCTGCCTTCTGGAGCTTGCTTCTTTCCACTGGGCCCTCACAGAGGGAGAACGTCTaGAGAAGGCAGATGTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: LSHLCPAFWSLLLSTGPSQRENV*RRQMFS Trigger: GGAGAACATCTGCCTTCTGCAGACGTTCTCCCTCTG...TGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACACAGATGGCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR CCA 90 bp | AGGCACATCTTTCGGAGACCTGAGCCATCTGTGTCCTGCCTTCTGGAGCTTGCTCTGCCTGGTTGGGGGTaGGCAAGCAACAGGAATAAG | + |
|
Preference number: 4 (lower is better) Translates to: RHIFRRPEPSVSCLLELALPGWG*ASNRNK Trigger: CTTATTCCTGTTGCTTGCCCACCCCCAACCAGGCAG...AGCAAGCTCCAGAAGGCAGGACACAGATGGCTCAGGTCTCCGAAAGATGTGCCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| 3UTR CAA 72 bp | CCTTCTGGAGCTTGCTTCTTTCCACTGGGCCCTCATTaGGGGGCTGGAATCCAAATCTGCACTGGGTGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: PSGACFFPLGPH*GAGIQICTGCS Trigger: AGAGCACCCAGTGCAGATTTGGATTCCAGCCCCCAAATGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR TCA 90 bp | AATAAACCTCGGACAATGCTGAGGCTAGGATGGGGAGATGAGGCACATCTTTCGATTTCACCAGCGGGCTaGCGAAGGAGAACTCGTCCC | + |
|
Preference number: 4 (lower is better) Translates to: NKPRTMLRLGWGDEAHLSISPAG*RRRTRP Trigger: GGGACGAGTTCTCCTTCGTCAGCCCGCTGGTGAAAT...CGAAAGATGTGCCTCATCTCCCCATCCTAGCCTCAGCATTGTCCGAGGTTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR TCA 90 bp | GAGCAGGATATAGCTCACTCTGACTACCTGGGAGTGCGGCTAGGCAAGCATTTGTCTGGCCAAAGTCGATaGGGTTCTGCAGATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: EQDIAHSDYLGVRLGKHLSGQSR*GSADPG Trigger: ACCTGGATCTGCAGAACCTCATCGACTTTGGCCAGA...CAAATGCTTGCCTAGCCGCACTCCCAGGTAGTCAGAGTGAGCTATATCCTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR TCA 90 bp | TCTGGAGCTTGCTTCTTTCCACTGGGCCCTCATTTGGGGGCTGGAATCCAAATCTCCCTCCACAGCAGCTaGACTTCTTCTGGCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SGACFFPLGPHLGAGIQISLHSS*TSSGQS Trigger: ACTTTGGCCAGAAGAAGTTCAGCTGCTGTGGAGGGA...GATTTGGATTCCAGCCCCCAAATGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR GCA 90 bp | GATATAGCTCACTCTGACTACCTGGGAGTGCGGCTAGGCAAGCATTTGGTAAACATGCCAGCAGCCAGCTaGAGCAGGAACACGATGGTG | + |
|
Preference number: 4 (lower is better) Translates to: DIAHSDYLGVRLGKHLVNMPAAS*SRNTMV Trigger: CACCATCGTGTTCCTGCTGCAGCTGGCTGCTGGCAT...GTTTACCAAATGCTTGCCTAGCCGCACTCCCAGGTAGTCAGAGTGAGCTATATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR TCA 90 bp | CTGAGCCATCTGTGTCCTGCCTTCTGGAGCTTGCTTCTTTCCACTGGGCCCTCACCCAGAAGAGCATGTTaGAGAAGAAGAGCAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: LSHLCPAFWSLLLSTGPSPRRAC*RRRAGI Trigger: AATACCTGCTCTTCTTCTTCAACATGCTCTTCTGGG...TGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACACAGATGGCTCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGCAGCCCTAACAGAGCTGTCTGTTGTGCCTCAGTATGCAGCTAGTAATCGTGCTTCATTAGCCTaGCATAGACACCCACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SAAALTELSVVPQYAASNRASLA*HRHPRP Trigger: TGGCCGTGGGTGTCTATGCCAGGCTAATGAAGCACG...ATTACTAGCTGCATACTGAGGCACAACAGACAGCTCTGTTAGGGCTGCTGCTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR CCA 90 bp | TCAGCAGCAGCCCTAACAGAGCTGTCTGTTGTGCCTCAGTATGCAGCTAGTAATGTGTTGATCACTGCCTaGTTGGGGGTGGGCAAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: SAAALTELSVVPQYAASNVLITA*LGVGKQ Trigger: TTGCTTGCCCACCCCCAACCAGGCAGTGATCAACAC...ATTACTAGCTGCATACTGAGGCACAACAGACAGCTCTGTTAGGGCTGCTGCTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR TCA 90 bp | TCAGCAGCAGCCCTAACAGAGCTGTCTGTTGTGCCTCAGTATGCAGCTAGTAATTCTGGCCAAAGTCGATaGGGTTCTGCAGATCCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: SAAALTELSVVPQYAASNSGQSR*GSADPG Trigger: ACCTGGATCTGCAGAACCTCATCGACTTTGGCCAGA...ATTACTAGCTGCATACTGAGGCACAACAGACAGCTCTGTTAGGGCTGCTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR TCA 90 bp | AATAAACCTCGGACAATGCTGAGGCTAGGATGGGGAGATGAGGCACATCTTTCGTCCCTCCACAGCAGCTaGACTTCTTCTGGCCAAAGT | + |
|
Preference number: 4 (lower is better) Translates to: NKPRTMLRLGWGDEAHLSSLHSS*TSSGQS Trigger: ACTTTGGCCAGAAGAAGTTCAGCTGCTGTGGAGGGA...CGAAAGATGTGCCTCATCTCCCCATCCTAGCCTCAGCATTGTCCGAGGTTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR TCA 90 bp | AGGCACATCTTTCGGAGACCTGAGCCATCTGTGTCCTGCCTTCTGGAGCTTGCTTGCTGTGTATCCAGTTaGCCAACTTGTCAATACAGC | + |
|
Preference number: 4 (lower is better) Translates to: RHIFRRPEPSVSCLLELACCVSS*PTCQYS Trigger: GCTGTATTGACAAGTTGGTCAACTGGATACACAGCA...AGCAAGCTCCAGAAGGCAGGACACAGATGGCTCAGGTCTCCGAAAGATGTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR TCA 90 bp | TCTGGAGCTTGCTTCTTTCCACTGGGCCCTCATTTGGGGGCTGGAATCCAAATCCCCAGAAGAGCATGTTaGAGAAGAAGAGCAGGTATT | + |
|
Preference number: 4 (lower is better) Translates to: SGACFFPLGPHLGAGIQIPRRAC*RRRAGI Trigger: AATACCTGCTCTTCTTCTTCAACATGCTCTTCTGGG...GATTTGGATTCCAGCCCCCAAATGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR CCA 90 bp | TTTCTGCCAGATTCCCGATTCTTACACTGTAGAAACACTGAGTTCTGGTGCAGGCGTGCTTCATTAGCCTaGCATAGACACCCACGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: FLPDSRFLHCRNTEFWCRRASLA*HRHPRP Trigger: TGGCCGTGGGTGTCTATGCCAGGCTAATGAAGCACG...CCTGCACCAGAACTCAGTGTTTCTACAGTGTAAGAATCGGGAATCTGGCAGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR CCA 90 bp | AATAAACCTCGGACAATGCTGAGGCTAGGATGGGGAGATGAGGCACATCTTTCGAGAGCCTGCATACCTTaGCCACACATCGTGTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: NKPRTMLRLGWGDEAHLSRACIP*PHIVLI Trigger: GATCAACACGATGTGTGGCCAAGGTATGCAGGCTCT...CGAAAGATGTGCCTCATCTCCCCATCCTAGCCTCAGCATTGTCCGAGGTTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR TCA 90 bp | AATAAACCTCGGACAATGCTGAGGCTAGGATGGGGAGATGAGGCACATCTTTCGTGCTGTGTATCCAGTTaGCCAACTTGTCAATACAGC | + |
|
Preference number: 4 (lower is better) Translates to: NKPRTMLRLGWGDEAHLSCCVSS*PTCQYS Trigger: GCTGTATTGACAAGTTGGTCAACTGGATACACAGCA...CGAAAGATGTGCCTCATCTCCCCATCCTAGCCTCAGCATTGTCCGAGGTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
||
| CDS-3UTR TCA 90 bp | CCAGAGGAAACTAAAAACACAAACTCAAATGTTCAAGGTTACAAACAGCATGAAGGCCACACATCGTGTTaGTCACTGCCTGGTTGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PEETKNTNSNVQGYKQHEGHTSC*SLPGWG Trigger: CCCCCAACCAGGCAGTGATCAACACGATGTGTGGCC...TTCATGCTGTTTGTAACCTTGAACATTTGAGTTTGTGTTTTTAGTTTCCTCTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS-3UTR GCA 90 bp | TCAACAAACTTTTATTGCCATTTCTGCCAGATTCCCGATTCTTACACTGTAGAACAGAGGGAGAACGTCTaGAGAAGGCAGATGTTCTCC | + |
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Preference number: 4 (lower is better) Translates to: STNFYCHFCQIPDSYTVEQRENV*RRQMFS Trigger: GGAGAACATCTGCCTTCTGCAGACGTTCTCCCTCTG...TTCTACAGTGTAAGAATCGGGAATCTGGCAGAAATGGCAATAAAAGTTTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS-3UTR CAA 90 bp | CTCTGCCCGCTGCACTCCCAGCCTCTCTGGAGGTGGAATTGTGCCAACTGGACTCGCTCCCGGCTAGGGTaGTCCTCCGAGCAGTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: LCPLHSQPLWRWNCANWTRSRLG*SSEQLK Trigger: CTTCAACTGCTCGGAGGACAACCCTAGCCGGGAGCG...AGTCCAGTTGGCACAATTCCACCTCCAGAGAGGCTGGGAGTGCAGCGGGCAGAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS-3UTR CAA 90 bp | AACATACCCCCTTCACTCCTATCCCCCATGTGCCCTGCGGTCCCGATCCGACCCACTTTCCCCCGAGCCTaGTCTGAGAAGACGAAGCCC | + |
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Preference number: 5 (lower is better) Translates to: NIPPSLLSPMCPAVPIRPTFPRA*SEKTKP Trigger: GGGCTTCGTCTTCTCAGACAAGGCTCGGGGGAAAGT...GGGTCGGATCGGGACCGCAGGGCACATGGGGGATAGGAGTGAAGGGGGTATGTT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS GCA 90 bp | CGAGCCTTGTCTGAGAAGACGAAGCCCAGGATGCCAGCAGCCAGCTaGAGCAGGAACACGATGGTGAGGCAGAGGGAGAACGTCTGCAGA | + |
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Preference number: 5 (lower is better) Translates to: RALSEKTKPRMPAAS*SRNTMVRQRENVCR Trigger: TCTGCAGACGTTCTCCCTCTGCCTCACCATCGTGTTCCTGCTGCAGCTGGCTGCTGGCATCCTGGGCTTCGTCTTCTCAGACAAGGCTCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS CCA 90 bp | GATTCACGAGGACCTGGGATAGCAGGATTCCCACCAGCTGGGGGATaGCCAGGCCTAGTGCCACACCACCAAGCAGGAACAGGTTGCTGT | + |
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Preference number: 5 (lower is better) Translates to: DSRGPGIAGFPPAGG*PGLVPHHQAGTGCC Trigger: ACAGCAACCTGTTCCTGCTTGGTGGTGTGGCACTAGGCCTGGCCATCCCCCAGCTGGTGGGAATCCTGCTATCCCAGGTCCTCGTGAATC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS-3UTR CAA 90 bp | GACCTGAGCCATCTGTGTCCTGCCTTCTGGAGCTTGCTTCTTTCCACTGGGCCCTGGCCACACATCGTGTaGATCACTGCCTGGTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: DLSHLCPAFWSLLLSTGPWPHIV*ITAWLG Trigger: CCCCAACCAGGCAGTGATCAACACGATGTGTGGCCA...GGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACACAGATGGCTCAGGTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS-3UTR CAA 90 bp | CTGAGCCATCTGTGTCCTGCCTTCTGGAGCTTGCTTCTTTCCACTGGGCCCTCATGGCCACACATCGTGTaGATCACTGCCTGGTTGGGG | + |
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Preference number: 5 (lower is better) Translates to: LSHLCPAFWSLLLSTGPSWPHIV*ITAWLG Trigger: CCCCAACCAGGCAGTGATCAACACGATGTGTGGCCA...TGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACACAGATGGCTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS-3UTR CAA 90 bp | AACATACCCCCTTCACTCCTATCCCCCATGTGCCCTGCGGTCCCGATCCGACCCTTGCTGTGTATCCAGTaGACCAACTTGTCAATACAG | + |
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Preference number: 5 (lower is better) Translates to: NIPPSLLSPMCPAVPIRPLLCIQ*TNLSIQ Trigger: CTGTATTGACAAGTTGGTCAACTGGATACACAGCAA...GGGTCGGATCGGGACCGCAGGGCACATGGGGGATAGGAGTGAAGGGGGTATGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS-3UTR CAA 90 bp | GATTCCCGATTCTTACACTGTAGAAACACTGAGTTCTGGTGCAGGGGATGCGGGCAGAGCCTGCATACCTaGGCCACACATCGTGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: DSRFLHCRNTEFWCRGCGQSLHT*ATHRVD Trigger: ATCAACACGATGTGTGGCCAAGGTATGCAGGCTCTG...CCCGCATCCCCTGCACCAGAACTCAGTGTTTCTACAGTGTAAGAATCGGGAATC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS-3UTR CAA 90 bp | TCCAAATCTGCACTGGGTGCTCTCAGCACCCTCTGCTGCTGGTCCGTGAGATGCGATCTGATCTTTTATTaGATTCACGAGGACCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: SKSALGALSTLCCWSVRCDLIFY*IHEDLG Trigger: TCCCAGGTCCTCGTGAATCAAATAAAAGATCAGATC...GCATCTCACGGACCAGCAGCAGAGGGTGCTGAGAGCACCCAGTGCAGATTTGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS-3UTR CAA 90 bp | TCAGCAGCAGCCCTAACAGAGCTGTCTGTTGTGCCTCAGTATGCAGCTAGTAATCAGAGCCTGCATACCTaGGCCACACATCGTGTTGAT | + |
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Preference number: 5 (lower is better) Translates to: SAAALTELSVVPQYAASNQSLHT*ATHRVD Trigger: ATCAACACGATGTGTGGCCAAGGTATGCAGGCTCTG...ATTACTAGCTGCATACTGAGGCACAACAGACAGCTCTGTTAGGGCTGCTGCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS-3UTR CAA 90 bp | AGGCACATCTTTCGGAGACCTGAGCCATCTGTGTCCTGCCTTCTGGAGCTTGCTATCCAGTTGACCAACTaGTCAATACAGCCATTGGTG | + |
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Preference number: 5 (lower is better) Translates to: RHIFRRPEPSVSCLLELAIQLTN*SIQPLV Trigger: CACCAATGGCTGTATTGACAAGTTGGTCAACTGGAT...AGCAAGCTCCAGAAGGCAGGACACAGATGGCTCAGGTCTCCGAAAGATGTGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS-3UTR CAA 90 bp | AGCCATCTGTGTCCTGCCTTCTGGAGCTTGCTTCTTTCCACTGGGCCCTCATTTATCCAGTTGACCAACTaGTCAATACAGCCATTGGTG | + |
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Preference number: 5 (lower is better) Translates to: SHLCPAFWSLLLSTGPSFIQLTN*SIQPLV Trigger: CACCAATGGCTGTATTGACAAGTTGGTCAACTGGAT...AAATGAGGGCCCAGTGGAAAGAAGCAAGCTCCAGAAGGCAGGACACAGATGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS-3UTR CAA 90 bp | GAGGAGCAGGATATAGCTCACTCTGACTACCTGGGAGTGCGGCTAGGCAAGCATTTGCTGTGTATCCAGTaGACCAACTTGTCAATACAG | + |
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Preference number: 5 (lower is better) Translates to: EEQDIAHSDYLGVRLGKHLLCIQ*TNLSIQ Trigger: CTGTATTGACAAGTTGGTCAACTGGATACACAGCAA...ATGCTTGCCTAGCCGCACTCCCAGGTAGTCAGAGTGAGCTATATCCTGCTCCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS-3UTR CAA 90 bp | TGCTTCTTTCCACTGGGCCCTCATTTGGGGGCTGGAATCCAAATCTGCACTGGGGATCTGATCTTTTATTaGATTCACGAGGACCTGGGA | + |
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Preference number: 5 (lower is better) Translates to: CFFPLGPHLGAGIQICTGDLIFY*IHEDLG Trigger: TCCCAGGTCCTCGTGAATCAAATAAAAGATCAGATC...CCCAGTGCAGATTTGGATTCCAGCCCCCAAATGAGGGCCCAGTGGAAAGAAGCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS TCA 90 bp | AGTACCACGGGTCAGCTCGGTGCTGTTGGTTGTAGAGCTGTAGCTTaGTCTGATCTTTTATTTGATTCACGAGGACCTGGGATAGCAGGA | + |
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Preference number: 5 (lower is better) Translates to: STTGQLGAVGCRAVA*SDLLFDSRGPGIAG Trigger: TCCTGCTATCCCAGGTCCTCGTGAATCAAATAAAAGATCAGATCAAGCTACAGCTCTACAACCAACAGCACCGAGCTGACCCGTGGTACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS-3UTR CAA 90 bp | TCAACAAACTTTTATTGCCATTTCTGCCAGATTCCCGATTCTTACACTGTAGAACGCTCCCGGCTAGGGTaGTCCTCCGAGCAGTTGAAG | + |
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Preference number: 5 (lower is better) Translates to: STNFYCHFCQIPDSYTVERSRLG*SSEQLK Trigger: CTTCAACTGCTCGGAGGACAACCCTAGCCGGGAGCG...TTCTACAGTGTAAGAATCGGGAATCTGGCAGAAATGGCAATAAAAGTTTGTTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS CAA 90 bp | GTAGATGACCTTACTAGCTTCCAAGTAGTCCAGAGCCTGCATACCTaGGCCACACATCGTGTTGATCACTGCCTGGTTGGGGGTGGGCAA | + |
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Preference number: 6 (lower is better) Translates to: VDDLTSFQVVQSLHT*ATHRVDHCLVGGGQ Trigger: TTGCCCACCCCCAACCAGGCAGTGATCAACACGATGTGTGGCCAAGGTATGCAGGCTCTGGACTACTTGGAAGCTAGTAAGGTCATCTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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| CDS CAA 72 bp | CTTACTAGCTTCCAAGTAGTCCAGAGCCTGCATACCTaGGCCACACATCGTGTTGATCACTGCCTGGTTGGG | + |
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Preference number: 6 (lower is better) Translates to: LTSFQVVQSLHT*ATHRVDHCLVG Trigger: CCCAACCAGGCAGTGATCAACACGATGTGTGGCCAAGGTATGCAGGCTCTGGACTACTTGGAAGCTAGTAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000046750.14 ENSMUST00000115250.4 |
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