Pregenerated sensors for TSPAN2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027858Ensembl transcript IDs: ENSMUST00000029451.12, ENSMUST00000119902.6, ENSMUST00000196611.5, ENSMUST00000197345.2
Found 104 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTCCTGGGTGTGGGGAAACGGGCTTGGTGTTCAAGAGCATGCCAGTaGGGCCTTGAAAGCTGGGCTGTGGGGAGTACTAGTGGCTTGCCT | + |
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Preference number: 1 (lower is better) Translates to: FLGVGKRAWCSRACQ*GLESWAVGSTSGLP Trigger: AGGCAAGCCACTAGTACTCCCCACAGCCCAGCTTTCAAGGCCCCACTGGCATGCTCTTGAACACCAAGCCCGTTTCCCCACACCCAGGAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR GCA 90 bp | TTCTGCAGCCAAGCTCTGGGAAGCACAGGGCATGTTACTTGTACTTaGTGTGTCTTCCCTGTTTCCAGGGGGCAGCGTCTGAACTGTGAA | + |
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Preference number: 1 (lower is better) Translates to: FCSQALGSTGHVTCT*CVFPVSRGQRLNCE Trigger: TTCACAGTTCAGACGCTGCCCCCTGGAAACAGGGAAGACACAGCAAGTACAAGTAACATGCCCTGTGCTTCCCAGAGCTTGGCTGCAGAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR GCA 90 bp | GATTCAGATGAGCTTACGCTGGTTCTACCCTCAAGAGACATAAATTaGTCTTTCCTGGGTGTGGGGAAACGGGCTTGGTGTTCAAGAGCA | + |
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Preference number: 1 (lower is better) Translates to: DSDELTLVLPSRDIN*SFLGVGKRAWCSRA Trigger: TGCTCTTGAACACCAAGCCCGTTTCCCCACACCCAGGAAAGAGCAATTTATGTCTCTTGAGGGTAGAACCAGCGTAAGCTCATCTGAATC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR CCA 90 bp | GTAGCAGTAGCAAGAATATCTGAAAAAGAGAGAGGTGGCGCTCTGTaGGTGAGACATCCCAGGAGTTGTGTGTCCTCAGCAAAACACTTG | + |
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Preference number: 1 (lower is better) Translates to: VAVARISEKERGGAL*VRHPRSCVSSAKHL Trigger: CAAGTGTTTTGCTGAGGACACACAACTCCTGGGATGTCTCACCCACAGAGCGCCACCTCTCTCTTTTTCAGATATTCTTGCTACTGCTAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR CCA 90 bp | CAGGGAATGAAACTCACTTCTGAGGAACGGGAAATAACTCTGAGCTaGAGGAACCTGAGTACACACTTGAGCCTGTTCTCTGTCTTCAGG | + |
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Preference number: 1 (lower is better) Translates to: QGMKLTSEEREITLS*RNLSTHLSLFSVFR Trigger: CCTGAAGACAGAGAACAGGCTCAAGTGTGTACTCAGGTTCCTCCAGCTCAGAGTTATTTCCCGTTCCTCAGAAGTGAGTTTCATTCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR TCA 90 bp | CCCAGGAGTTGTGTGTCCTCAGCAAAACACTTGGTAAAAGTTTCCTaGAGCATGGCACTTTGTTCTAGCACATACCAAAGTCTTAGGTTC | + |
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Preference number: 1 (lower is better) Translates to: PRSCVSSAKHLVKVS*SMALCSSTYQSLRF Trigger: GAACCTAAGACTTTGGTATGTGCTAGAACAAAGTGCCATGCTTCAGGAAACTTTTACCAAGTGTTTTGCTGAGGACACACAACTCCTGGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR TCA 90 bp | TTTTCCTTAAACTTATTCACTCACCCAGGGAATGAAACTCACTTCTaGGGAACGGGAAATAACTCTGAGCTGGAGGAACCTGAGTACACA | + |
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Preference number: 1 (lower is better) Translates to: FSLNLFTHPGNETHF*GTGNNSELEEPEYT Trigger: TGTGTACTCAGGTTCCTCCAGCTCAGAGTTATTTCCCGTTCCTCAGAAGTGAGTTTCATTCCCTGGGTGAGTGAATAAGTTTAAGGAAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR TCA 90 bp | AGAAAGAATATAGTTGTGCTGCAGCTGTATGCACGAAAGTACTTTTaGTCCATTAACTTGCCTTTGTTGTGTGCATACATATTGAAGAAG | + |
|
Preference number: 1 (lower is better) Translates to: RKNIVVLQLYARKYF*SINLPLLCAYILKK Trigger: CTTCTTCAATATGTATGCACACAACAAAGGCAAGTTAATGGATCAAAAGTACTTTCGTGCATACAGCTGCAGCACAACTATATTCTTTCT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR-3UTR TCA 90 bp | CGACCCTGCTGTGGGGTTTCCCACTTGCTGCCAAAAGGCCGAGCAGTGCCTGGGGCTTGTCTGTCTGCGTaGCTTCTCTTTCCAGAGAGA | + |
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Preference number: 2 (lower is better) Translates to: RPCCGVSHLLPKGRAVPGACLSA*LLFPER Trigger: TCTCTCTGGAAAGAGAAGTCACGCAGACAGACAAGC...CCCAGGCACTGCTCGGCCTTTTGGCAGCAAGTGGGAAACCCCACAGCAGGGTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR-3UTR GCA 90 bp | CGACCCTGCTGTGGGGTTTCCCACTTGCTGCCAAAAGGCCGAGCAGTGCCTGGGTATCAGTATGTGCAATaGATATACCAGAAACAGACA | + |
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Preference number: 2 (lower is better) Translates to: RPCCGVSHLLPKGRAVPGYQYVQ*IYQKQT Trigger: TGTCTGTTTCTGGTATATGCATTGCACATACTGATA...CCCAGGCACTGCTCGGCCTTTTGGCAGCAAGTGGGAAACCCCACAGCAGGGTCG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR-3UTR GCA 90 bp | AAATTGCTCTTTCCTGGGTGTGGGGAAACGGGCTTGGTGTTCAAGAGCATGCCAGGAGTACTAGTGGCTTaGCTCTGGGCCATAGAAACC | + |
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Preference number: 2 (lower is better) Translates to: KLLFPGCGETGLVFKSMPGVLVA*LWAIET Trigger: GGTTTCTATGGCCCAGAGGCAAGCCACTAGTACTCC...TGGCATGCTCTTGAACACCAAGCCCGTTTCCCCACACCCAGGAAAGAGCAATTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR-3UTR CCA 90 bp | AAATTGCTCTTTCCTGGGTGTGGGGAAACGGGCTTGGTGTTCAAGAGCATGCCAGAAATAACTCTGAGCTaGAGGAACCTGAGTACACAC | + |
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Preference number: 2 (lower is better) Translates to: KLLFPGCGETGLVFKSMPEITLS*RNLSTH Trigger: GTGTGTACTCAGGTTCCTCCAGCTCAGAGTTATTTC...TGGCATGCTCTTGAACACCAAGCCCGTTTCCCCACACCCAGGAAAGAGCAATTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR-3UTR CCA 90 bp | AAAATCCACACAAAAACCAACTTGATTCAGATGAGCTTACGCTGGTTCTACCCTTTGAAAGCTGGGCTGTaGGGAGTACTAGTGGCTTGC | + |
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Preference number: 2 (lower is better) Translates to: KIHTKTNLIQMSLRWFYPLKAGL*GVLVAC Trigger: GCAAGCCACTAGTACTCCCCACAGCCCAGCTTTCAA...AGGGTAGAACCAGCGTAAGCTCATCTGAATCAAGTTGGTTTTTGTGTGGATTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR-3UTR TCA 90 bp | AAAATCCACACAAAAACCAACTTGATTCAGATGAGCTTACGCTGGTTCTACCCTTGTAAACTCAAGTCATaGGGTATTCCAGAGGTACAG | + |
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Preference number: 2 (lower is better) Translates to: KIHTKTNLIQMSLRWFYPCKLKS*GIPEVQ Trigger: CTGTACCTCTGGAATACCTCATGACTTGAGTTTACA...AGGGTAGAACCAGCGTAAGCTCATCTGAATCAAGTTGGTTTTTGTGTGGATTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR-3UTR CCA 90 bp | TTTCCCCACTTAAAATCAATCACTCAGGCTCCCAAAGAACCTGAGCATCTATTCGACACAGTCAATCTATaGCCCTTCAATTCTTCTATC | + |
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Preference number: 2 (lower is better) Translates to: FPHLKSITQAPKEPEHLFDTVNL*PFNSSI Trigger: GATAGAAGAATTGAAGGGCCATAGATTGACTGTGTC...GAATAGATGCTCAGGTTCTTTGGGAGCCTGAGTGATTGATTTTAAGTGGGGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR-3UTR GCA 90 bp | CACCACAAAACACACAAAAAGGTTCCTGTTGTATTAACTCCACATTTCTGCAGCACAGATATCAGTATGTaGAATGCATATACCAGAAAC | + |
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Preference number: 2 (lower is better) Translates to: HHKTHKKVPVVLTPHFCSTDISM*NAYTRN Trigger: GTTTCTGGTATATGCATTGCACATACTGATATCTGT...GCTGCAGAAATGTGGAGTTAATACAACAGGAACCTTTTTGTGTGTTTTGTGGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR-3UTR GCA 90 bp | GAAACAGACATTCACTCAAGGGGCAAATCAGTAATGAGTCAGACTTACATACATACGACAACTCTAGATTaGAATTTTCCTGATGAAGTA | + |
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Preference number: 2 (lower is better) Translates to: ETDIHSRGKSVMSQTYIHTTTLD*NFPDEV Trigger: TACTTCATCAGGAAAATTGCAATCTAGAGTTGTCGT...ATGTATGTAAGTCTGACTCATTACTGATTTGCCCCTTGAGTGAATGTCTGTTTC 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
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| 3UTR CCA 72 bp | TGGTGTTCAAGAGCATGCCAGTGGGGCCTTGAAAGCTaGGCTGTGGGGAGTACTAGTGGCTTGCCTCTGGGC | + |
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Preference number: 3 (lower is better) Translates to: WCSRACQWGLES*AVGSTSGLPLG Trigger: GCCCAGAGGCAAGCCACTAGTACTCCCCACAGCCCAGCTTTCAAGGCCCCACTGGCATGCTCTTGAACACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR CCA 72 bp | CAAGAGCATGCCAGTGGGGCCTTGAAAGCTGGGCTGTaGGGAGTACTAGTGGCTTGCCTCTGGGCCATAGAA | + |
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Preference number: 3 (lower is better) Translates to: QEHASGALKAGL*GVLVACLWAIE Trigger: TTCTATGGCCCAGAGGCAAGCCACTAGTACTCCCCACAGCCCAGCTTTCAAGGCCCCACTGGCATGCTCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR GCA 72 bp | GCCTTGAAAGCTGGGCTGTGGGGAGTACTAGTGGCTTaGCTCTGGGCCATAGAAACCACCTTCACCTATGAC | + |
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Preference number: 3 (lower is better) Translates to: ALKAGLWGVLVA*LWAIETTFTYD Trigger: GTCATAGGTGAAGGTGGTTTCTATGGCCCAGAGGCAAGCCACTAGTACTCCCCACAGCCCAGCTTTCAAGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR GCA 72 bp | AACTCAAGTCATGAGGTATTCCAGAGGTACAGACAGTaGCAGCCAGAGTCCCCCACTGTCACGCTGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: NSSHEVFQRYRQ*QPESPTVTLHS Trigger: ACTGTGCAGCGTGACAGTGGGGGACTCTGGCTGGCACTGTCTGTACCTCTGGAATACCTCATGACTTGAGTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR CCA 72 bp | AAAGCTGGGCTGTGGGGAGTACTAGTGGCTTGCCTCTaGGCCATAGAAACCACCTTCACCTATGACAAGAGA | + |
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Preference number: 3 (lower is better) Translates to: KAGLWGVLVACL*AIETTFTYDKR Trigger: TCTCTTGTCATAGGTGAAGGTGGTTTCTATGGCCCAGAGGCAAGCCACTAGTACTCCCCACAGCCCAGCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR TCA 72 bp | CTTGCTGTGTCTTCCCTGTTTCCAGGGGGCAGCGTCTaGACTGTGAATCCCTTGCTTGTTATAAGGACACCA | + |
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Preference number: 3 (lower is better) Translates to: LAVSSLFPGGSV*TVNPLLVIRTP Trigger: TGGTGTCCTTATAACAAGCAAGGGATTCACAGTTCAGACGCTGCCCCCTGGAAACAGGGAAGACACAGCAAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR CCA 72 bp | GCAAGAATATCTGAAAAAGAGAGAGGTGGCGCTCTGTaGGTGAGACATCCCAGGAGTTGTGTGTCCTCAGCA | + |
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Preference number: 3 (lower is better) Translates to: ARISEKERGGAL*VRHPRSCVSSA Trigger: TGCTGAGGACACACAACTCCTGGGATGTCTCACCCACAGAGCGCCACCTCTCTCTTTTTCAGATATTCTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR TCA 72 bp | GAATATCTGAAAAAGAGAGAGGTGGCGCTCTGTGGGTaGGACATCCCAGGAGTTGTGTGTCCTCAGCAAAAC | + |
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Preference number: 3 (lower is better) Translates to: EYLKKREVALCG*DIPGVVCPQQN Trigger: GTTTTGCTGAGGACACACAACTCCTGGGATGTCTCACCCACAGAGCGCCACCTCTCTCTTTTTCAGATATTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR GCA 72 bp | AAGCACTCACTTTTCTGGGGCACATGCTTGTCTGTCTaGGTGACTTCTCTTTCCAGAGAGAGGCTTTCTGTT | + |
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Preference number: 3 (lower is better) Translates to: KHSLFWGTCLSV*VTSLSRERLSV Trigger: AACAGAAAGCCTCTCTCTGGAAAGAGAAGTCACGCAGACAGACAAGCATGTGCCCCAGAAAAGTGAGTGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR-3UTR CAA 90 bp | CACCACAAAACACACAAAAAGGTTCCTGTTGTATTAACTCCACATTTCTGCAGCGGGAGTACTAGTGGCTaGCCTCTGGGCCATAGAAAC | + |
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Preference number: 3 (lower is better) Translates to: HHKTHKKVPVVLTPHFCSGSTSG*PLGHRN Trigger: GTTTCTATGGCCCAGAGGCAAGCCACTAGTACTCCC...GCTGCAGAAATGTGGAGTTAATACAACAGGAACCTTTTTGTGTGTTTTGTGGTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR CCA 72 bp | AAACTCACTTCTGAGGAACGGGAAATAACTCTGAGCTaGAGGAACCTGAGTACACACTTGAGCCTGTTCTCT | + |
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Preference number: 3 (lower is better) Translates to: KLTSEEREITLS*RNLSTHLSLFS Trigger: AGAGAACAGGCTCAAGTGTGTACTCAGGTTCCTCCAGCTCAGAGTTATTTCCCGTTCCTCAGAAGTGAGTTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR TCA 72 bp | AACTTATTCACTCACCCAGGGAATGAAACTCACTTCTaGGGAACGGGAAATAACTCTGAGCTGGAGGAACCT | + |
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Preference number: 3 (lower is better) Translates to: NLFTHPGNETHF*GTGNNSELEEP Trigger: AGGTTCCTCCAGCTCAGAGTTATTTCCCGTTCCTCAGAAGTGAGTTTCATTCCCTGGGTGAGTGAATAAGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR GCA 72 bp | CACAAAAAGGTTCCTGTTGTATTAACTCCACATTTCTaGAGCCAAGCTCTGGGAAGCACAGGGCATGTTACT | + |
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Preference number: 3 (lower is better) Translates to: HKKVPVVLTPHF*SQALGSTGHVT Trigger: AGTAACATGCCCTGTGCTTCCCAGAGCTTGGCTGCAGAAATGTGGAGTTAATACAACAGGAACCTTTTTGTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR TCA 72 bp | TTTTTCTCCAAAGCTAGTAGCAGTAGCAAGAATATCTaGAAAAGAGAGAGGTGGCGCTCTGTGGGTGAGACA | + |
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Preference number: 3 (lower is better) Translates to: FFSKASSSSKNI*KRERWRSVGET Trigger: TGTCTCACCCACAGAGCGCCACCTCTCTCTTTTTCAGATATTCTTGCTACTGCTACTAGCTTTGGAGAAAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR-3UTR CAA 90 bp | CCAAAGCTAGTAGCAGTAGCAAGAATATCTGAAAAAGAGAGAGGTGGCGCTCTGTCCATTAACTTGCCTTaGTTGTGTGCATACATATTG | + |
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Preference number: 3 (lower is better) Translates to: PKLVAVARISEKERGGALSINLP*LCAYIL Trigger: CAATATGTATGCACACAACAAAGGCAAGTTAATGGA...CAGAGCGCCACCTCTCTCTTTTTCAGATATTCTTGCTACTGCTACTAGCTTTGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR TCA 72 bp | TGTGTGTCCTCAGCAAAACACTTGGTAAAAGTTTCCTaGAGCATGGCACTTTGTTCTAGCACATACCAAAGT | + |
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Preference number: 3 (lower is better) Translates to: CVSSAKHLVKVS*SMALCSSTYQS Trigger: ACTTTGGTATGTGCTAGAACAAAGTGCCATGCTTCAGGAAACTTTTACCAAGTGTTTTGCTGAGGACACACA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR TCA 72 bp | ATAGTTGTGCTGCAGCTGTATGCACGAAAGTACTTTTaGTCCATTAACTTGCCTTTGTTGTGTGCATACATA | + |
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Preference number: 3 (lower is better) Translates to: IVVLQLYARKYF*SINLPLLCAYI Trigger: TATGTATGCACACAACAAAGGCAAGTTAATGGATCAAAAGTACTTTCGTGCATACAGCTGCAGCACAACTAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR TCA 72 bp | TATAATCCTAAGACTCCTTTATACGCTGTTCCATTATaGCAAATACATCAATTTCGACCCTGCTGTGGGGTT | + |
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Preference number: 3 (lower is better) Translates to: YNPKTPLYAVPL*QIHQFRPCCGV Trigger: AACCCCACAGCAGGGTCGAAATTGATGTATTTGTCATAATGGAACAGCGTATAAAGGAGTCTTAGGATTATA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR CAA 72 bp | AACGGGCTTGGTGTTCAAGAGCATGCCAGTGGGGCCTaGAAAGCTGGGCTGTGGGGAGTACTAGTGGCTTGC | + |
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Preference number: 4 (lower is better) Translates to: NGLGVQEHASGA*KAGLWGVLVAC Trigger: GCAAGCCACTAGTACTCCCCACAGCCCAGCTTTCAAGGCCCCACTGGCATGCTCTTGAACACCAAGCCCGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR CAA 72 bp | CTGCAGCCAAGCTCTGGGAAGCACAGGGCATGTTACTaGTACTTGCTGTGTCTTCCCTGTTTCCAGGGGGCA | + |
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Preference number: 4 (lower is better) Translates to: LQPSSGKHRACY*YLLCLPCFQGA Trigger: TGCCCCCTGGAAACAGGGAAGACACAGCAAGTACAAGTAACATGCCCTGTGCTTCCCAGAGCTTGGCTGCAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| 3UTR CAA 72 bp | GAGAGGTGGCGCTCTGTGGGTGAGACATCCCAGGAGTaGTGTGTCCTCAGCAAAACACTTGGTAAAAGTTTC | + |
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Preference number: 4 (lower is better) Translates to: ERWRSVGETSQE*CVLSKTLGKSF Trigger: GAAACTTTTACCAAGTGTTTTGCTGAGGACACACAACTCCTGGGATGTCTCACCCACAGAGCGCCACCTCTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| CDS-3UTR CCA 90 bp | TTGCATACAAGAACTAGGGTTTCCCAGGAAACAGATATCAGTATGTGCAATGCAACTGTGACTCACGCATaGCTCCACAGCACCCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: LHTRTRVSQETDISMCNATVTHA*LHSTRR Trigger: TCTTCGGGTGCTGTGGAGCCATGCGTGAGTCACAGT...TGCATTGCACATACTGATATCTGTTTCCTGGGAAACCCTAGTTCTTGTATGCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
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| CDS-3UTR CCA 90 bp | TTCCCAGGAAACAGATATCAGTATGTGCAATGCATATACCAGAAACAGACATTCGCTCCTTTGGACACGTaGGCTGGACTTGCTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: FPGNRYQYVQCIYQKQTFAPLDT*AGLAQS Trigger: GCTCTGAGCAAGTCCAGCCCACGTGTCCAAAGGAGC...GAATGTCTGTTTCTGGTATATGCATTGCACATACTGATATCTGTTTCCTGGGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
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| CDS-3UTR CCA 90 bp | CGAGCCGAGAGAGCTCTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTGCAATTCTTGTGGCCTaGGAGCTCCTTTGGACACGT | + |
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Preference number: 4 (lower is better) Translates to: RAERALVIISTTTLDCNFAILVA*ELLWTR Trigger: ACGTGTCCAAAGGAGCTCCCAGGCCACAAGAATTGC...AAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAGAGCTCTCTCGGCTCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
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| CDS-3UTR TCA 90 bp | CCAGGAAACAGATATCAGTATGTGCAATGCATATACCAGAAACAGACATTCACTGCCAGAACAGCAGGTTaGAGCCGAGCAGCAGATACT | + |
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Preference number: 4 (lower is better) Translates to: PGNRYQYVQCIYQKQTFTARTAG*SRAADT Trigger: AGTATCTGCTGCTCGGCTTCAACCTGCTGTTCTGGC...AGTGAATGTCTGTTTCTGGTATATGCATTGCACATACTGATATCTGTTTCCTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
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| CDS-3UTR CCA 90 bp | AACAGATATCAGTATGTGCAATGCATATACCAGAAACAGACATTCACTCAAGGGACTGTGACTCACGCATaGCTCCACAGCACCCGAAGA | + |
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Preference number: 4 (lower is better) Translates to: NRYQYVQCIYQKQTFTQGTVTHA*LHSTRR Trigger: TCTTCGGGTGCTGTGGAGCCATGCGTGAGTCACAGT...CCCTTGAGTGAATGTCTGTTTCTGGTATATGCATTGCACATACTGATATCTGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
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| CDS-3UTR CCA 90 bp | AGAGCTCTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTCCTGATGAAGCTCCTTTGGACACGTaGGCTGGACTTGCTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: RALVIISTTTLDCNFPDEAPLDT*AGLAQS Trigger: GCTCTGAGCAAGTCCAGCCCACGTGTCCAAAGGAGC...TTCATCAGGAAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAGAGCTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
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| CDS-3UTR CCA 90 bp | GCTCTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTCCTGATGAAGTAGCTCCTTTGGACACGTaGGCTGGACTTGCTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: ALVIISTTTLDCNFPDEVAPLDT*AGLAQS Trigger: GCTCTGAGCAAGTCCAGCCCACGTGTCCAAAGGAGC...TACTTCATCAGGAAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAGAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
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| CDS-3UTR CCA 90 bp | ACATTAAGAACATTAGTGACAGATCAGCTGTGGATTACAAACAGAAAATGGCAAGCTCCTTTGGACACGTaGGCTGGACTTGCTCAGAGC | + |
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Preference number: 4 (lower is better) Translates to: TLRTLVTDQLWITNRKWQAPLDT*AGLAQS Trigger: GCTCTGAGCAAGTCCAGCCCACGTGTCCAAAGGAGC...TTGCCATTTTCTGTTTGTAATCCACAGCTGATCTGTCACTAATGTTCTTAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197345.2 |
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| CDS-3UTR CCA 90 bp | AACAGATATCAGTATGTGCAATGCATATACCAGAAACAGACATTCACTCAAGGGGCAATTCTTGTGGCCTaGGAGCTCCTTTGGACACGT | + |
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Preference number: 4 (lower is better) Translates to: NRYQYVQCIYQKQTFTQGAILVA*ELLWTR Trigger: ACGTGTCCAAAGGAGCTCCCAGGCCACAAGAATTGC...CCCTTGAGTGAATGTCTGTTTCTGGTATATGCATTGCACATACTGATATCTGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
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| 3UTR CAA 72 bp | GAAATAACTCTGAGCTGGAGGAACCTGAGTACACACTaGAGCCTGTTCTCTGTCTTCAGGAAGACAGATAAA | + |
|
Preference number: 4 (lower is better) Translates to: EITLSWRNLSTH*SLFSVFRKTDK Trigger: TTTATCTGTCTTCCTGAAGACAGAGAACAGGCTCAAGTGTGTACTCAGGTTCCTCCAGCTCAGAGTTATTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
||
| CDS-3UTR TCA 90 bp | GCCGAGAGAGCTCTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTCCTTCTTTTCCACAGCACTaGAATGCTGAGTGGAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AERALVIISTTTLDCNFPSFPQH*NAEWKV Trigger: TACCTTCCACTCAGCATTTCAGTGCTGTGGAAAAGA...AGGAAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAGAGCTCTCTCGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
||
| CDS-3UTR TCA 90 bp | CGAGCCGAGAGAGCTCTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTTCTTTTCCACAGCACTaGAATGCTGAGTGGAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RAERALVIISTTTLDCNFSFPQH*NAEWKV Trigger: TACCTTCCACTCAGCATTTCAGTGCTGTGGAAAAGA...AAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAGAGCTCTCTCGGCTCG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
||
| CDS-3UTR TCA 90 bp | GCCGAGAGAGCTCTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTCCTAGCAAAGCACCATGCTaGATATCATGCCAAAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: AERALVIISTTTLDCNFPSKAPC*ISCQRS Trigger: CGATCTTTGGCATGATATTCAGCATGGTGCTTTGCT...AGGAAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAGAGCTCTCTCGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
||
| CDS-3UTR TCA 90 bp | CGAGCCGAGAGAGCTCTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTAGCAAAGCACCATGCTaGATATCATGCCAAAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: RAERALVIISTTTLDCNFSKAPC*ISCQRS Trigger: CGATCTTTGGCATGATATTCAGCATGGTGCTTTGCT...AAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAGAGCTCTCTCGGCTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
||
| CDS-3UTR CCA 90 bp | CTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTCCTGATGAAGTATCAACTGTGACTCACGCATaGCTCCACAGCACCCGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVIISTTTLDCNFPDEVSTVTHA*LHSTRR Trigger: TCTTCGGGTGCTGTGGAGCCATGCGTGAGTCACAGT...TGATACTTCATCAGGAAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
||
| CDS-3UTR CCA 90 bp | CCAGGAAACAGATATCAGTATGTGCAATGCATATACCAGAAACAGACATTCACTTTTGGACACGTGGGCTaGACTTGCTCAGAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGNRYQYVQCIYQKQTFTFGHVG*TCSELS Trigger: AGAAAGCTCTGAGCAAGTCCAGCCCACGTGTCCAAA...AGTGAATGTCTGTTTCTGGTATATGCATTGCACATACTGATATCTGTTTCCTGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
||
| CDS-3UTR CCA 90 bp | AGAGCTCTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTCCTGATGAAGCAATTCTTGTGGCCTaGGAGCTCCTTTGGACACGT | + |
|
Preference number: 4 (lower is better) Translates to: RALVIISTTTLDCNFPDEAILVA*ELLWTR Trigger: ACGTGTCCAAAGGAGCTCCCAGGCCACAAGAATTGC...TTCATCAGGAAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAGAGCTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
||
| CDS-3UTR TCA 90 bp | TGCATACAAGAACTAGGGTTTCCCAGGAAACAGATATCAGTATGTGCAATGCATAGCAAAGCACCATGCTaGATATCATGCCAAAGATCG | + |
|
Preference number: 4 (lower is better) Translates to: CIQELGFPRKQISVCAMHSKAPC*ISCQRS Trigger: CGATCTTTGGCATGATATTCAGCATGGTGCTTTGCT...ATGCATTGCACATACTGATATCTGTTTCCTGGGAAACCCTAGTTCTTGTATGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
||
| CDS-3UTR CCA 90 bp | ACATTAAGAACATTAGTGACAGATCAGCTGTGGATTACAAACAGAAAATGGCAAGCAATTCTTGTGGCCTaGGAGCTCCTTTGGACACGT | + |
|
Preference number: 4 (lower is better) Translates to: TLRTLVTDQLWITNRKWQAILVA*ELLWTR Trigger: ACGTGTCCAAAGGAGCTCCCAGGCCACAAGAATTGC...TTGCCATTTTCTGTTTGTAATCCACAGCTGATCTGTCACTAATGTTCTTAATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197345.2 |
||
| 3UTR CAA 72 bp | GAAACGCAACTATATGTAATTAGAACCCTAGGGGTGTaGCTTTTGAACCCACTGCACAACAACAGCATGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ETQLYVIRTLGV*LLNPLHNNSMK Trigger: TTTCATGCTGTTGTTGTGCAGTGGGTTCAAAAGCAACACCCCTAGGGTTCTAATTACATATAGTTGCGTTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
||
| CDS-3UTR TCA 90 bp | CCAGGAAACAGATATCAGTATGTGCAATGCATATACCAGAAACAGACATTCACTTCTTTTCCACAGCACTaGAATGCTGAGTGGAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: PGNRYQYVQCIYQKQTFTSFPQH*NAEWKV Trigger: TACCTTCCACTCAGCATTTCAGTGCTGTGGAAAAGA...AGTGAATGTCTGTTTCTGGTATATGCATTGCACATACTGATATCTGTTTCCTGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
||
| CDS-3UTR CCA 90 bp | CTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTCCTGATGAAGTATCATTTGGACACGTGGGCTaGACTTGCTCAGAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: LVIISTTTLDCNFPDEVSFGHVG*TCSELS Trigger: AGAAAGCTCTGAGCAAGTCCAGCCCACGTGTCCAAA...TGATACTTCATCAGGAAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
||
| CDS-3UTR CCA 90 bp | ACATTAAGAACATTAGTGACAGATCAGCTGTGGATTACAAACAGAAAATGGCAATTTGGACACGTGGGCTaGACTTGCTCAGAGCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: TLRTLVTDQLWITNRKWQFGHVG*TCSELS Trigger: AGAAAGCTCTGAGCAAGTCCAGCCCACGTGTCCAAA...TTGCCATTTTCTGTTTGTAATCCACAGCTGATCTGTCACTAATGTTCTTAATGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197345.2 |
||
| CDS-3UTR GCA 90 bp | AAACGAGCCGAGAGAGCTCTTGTGATAATTAGCACGACAACTCTAGATTGCAATATCCTTGCCTATAAATaGAAATACTCCAGTGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KRAERALVIISTTTLDCNILAYK*KYSSGY Trigger: GTAACCACTGGAGTATTTGCATTTATAGGCAAGGAT...ATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAGAGCTCTCTCGGCTCGTTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
||
| CDS-3UTR CCA 90 bp | GCCGAGAGAGCTCTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTCCTATGCAAATACTCCAGTaGTTACTTCAGCAGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: AERALVIISTTTLDCNFPMQILQ*LLQQQI Trigger: TATTTGCTGCTGAAGTAACCACTGGAGTATTTGCAT...AGGAAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAGAGCTCTCTCGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
||
| CDS-3UTR TCA 90 bp | ACATTAAGAACATTAGTGACAGATCAGCTGTGGATTACAAACAGAAAATGGCAATCTTTTCCACAGCACTaGAATGCTGAGTGGAAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: TLRTLVTDQLWITNRKWQSFPQH*NAEWKV Trigger: TACCTTCCACTCAGCATTTCAGTGCTGTGGAAAAGA...TTGCCATTTTCTGTTTGTAATCCACAGCTGATCTGTCACTAATGTTCTTAATGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000197345.2 |
||
| CDS-3UTR GCA 90 bp | CACAAAACACACAAAAAGGTTCCTGTTGTATTAACTCCACATTTCTGCAGCCAAACAATTCCAATGAGCTaGAGTTTAGCACTGATTACG | + |
|
Preference number: 4 (lower is better) Translates to: HKTHKKVPVVLTPHFCSQTIPMS*SLALIT Trigger: CGTAATCAGTGCTAAACTGCAGCTCATTGGAATTGT...TTGGCTGCAGAAATGTGGAGTTAATACAACAGGAACCTTTTTGTGTGTTTTGTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
||
| CDS-3UTR GCA 90 bp | CCAGGAAACAGATATCAGTATGTGCAATGCATATACCAGAAACAGACATTCACTACAATTCCAATGAGCTaGAGTTTAGCACTGATTACG | + |
|
Preference number: 4 (lower is better) Translates to: PGNRYQYVQCIYQKQTFTTIPMS*SLALIT Trigger: CGTAATCAGTGCTAAACTGCAGCTCATTGGAATTGT...AGTGAATGTCTGTTTCTGGTATATGCATTGCACATACTGATATCTGTTTCCTGG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
||
| CDS-3UTR CCA 90 bp | AGGGTTTCCCAGGAAACAGATATCAGTATGTGCAATGCATATACCAGAAACAGAATGCAAATACTCCAGTaGTTACTTCAGCAGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: RVSQETDISMCNAYTRNRMQILQ*LLQQQI Trigger: TATTTGCTGCTGAAGTAACCACTGGAGTATTTGCAT...TCTGTTTCTGGTATATGCATTGCACATACTGATATCTGTTTCCTGGGAAACCCT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
||
| CDS-3UTR GCA 90 bp | GAGAGAGCTCTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTCCTGATATCCTTGCCTATAAATaGAAATACTCCAGTGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ERALVIISTTTLDCNFPDILAYK*KYSSGY Trigger: GTAACCACTGGAGTATTTGCATTTATAGGCAAGGAT...ATCAGGAAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAGAGCTCTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
||
| CDS-3UTR CCA 90 bp | GAGAGAGCTCTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTCCTGATATGATAAATCCTTCATaGTACCTCCAAATCGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: ERALVIISTTTLDCNFPDMINPS*YLQIET Trigger: GGTTTCGATTTGGAGGTACCATGAAGGATTTATCAT...ATCAGGAAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAGAGCTCTCTC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
||
| CDS-3UTR CCA 90 bp | CACAAAACACACAAAAAGGTTCCTGTTGTATTAACTCCACATTTCTGCAGCCAAATGCAAATACTCCAGTaGTTACTTCAGCAGCAAATA | + |
|
Preference number: 4 (lower is better) Translates to: HKTHKKVPVVLTPHFCSQMQILQ*LLQQQI Trigger: TATTTGCTGCTGAAGTAACCACTGGAGTATTTGCAT...TTGGCTGCAGAAATGTGGAGTTAATACAACAGGAACCTTTTTGTGTGTTTTGTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
||
| CDS-3UTR GCA 90 bp | GAAACAGATATCAGTATGTGCAATGCATATACCAGAAACAGACATTCACTCAAGATCCTTGCCTATAAATaGAAATACTCCAGTGGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: ETDISMCNAYTRNRHSLKILAYK*KYSSGY Trigger: GTAACCACTGGAGTATTTGCATTTATAGGCAAGGAT...CTTGAGTGAATGTCTGTTTCTGGTATATGCATTGCACATACTGATATCTGTTTC 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
||
| CDS-3UTR CCA 90 bp | AAACAGATATCAGTATGTGCAATGCATATACCAGAAACAGACATTCACTCAAGGATGATAAATCCTTCATaGTACCTCCAAATCGAAACC | + |
|
Preference number: 4 (lower is better) Translates to: KQISVCAMHIPETDIHSRMINPS*YLQIET Trigger: GGTTTCGATTTGGAGGTACCATGAAGGATTTATCAT...CCTTGAGTGAATGTCTGTTTCTGGTATATGCATTGCACATACTGATATCTGTTT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
||
| CDS-3UTR CAA 90 bp | CATGCCAGTGGGGCCTTGAAAGCTGGGCTGTGGGGAGTACTAGTGGCTTGCCTCCGCGTGAGTTCCGTATaGCACAGCAAAGCACCATGC | + |
|
Preference number: 5 (lower is better) Translates to: HASGALKAGLWGVLVACLRVSSV*HSKAPC Trigger: GCATGGTGCTTTGCTGTGCAATACGGAACTCACGCG...GAGGCAAGCCACTAGTACTCCCCACAGCCCAGCTTTCAAGGCCCCACTGGCATG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
||
| CDS CCA 90 bp | AATCGAAACCATAGTCCAAATGCAATAACGGCTGATCCGGCTAGCTaGCGCCACCCGCCGGGCGATGCCGCCGAAGATGATGGCTTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: NRNHSPNAITADPAS*RHPPGDAAEDDGFF Trigger: AAAGAAGCCATCATCTTCGGCGGCATCGCCCGGCGGGTGGCGCCAGCTAGCCGGATCAGCCGTTATTGCATTTGGACTATGGTTTCGATT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119902.6 |
||
| CDS-3UTR CAA 90 bp | AAATTGCTCTTTCCTGGGTGTGGGGAAACGGGCTTGGTGTTCAAGAGCATGCCAGGCCTGGGAGCTCCTTaGGACACGTGGGCTGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: KLLFPGCGETGLVFKSMPGLGAP*DTWAGL Trigger: AAGTCCAGCCCACGTGTCCAAAGGAGCTCCCAGGCC...TGGCATGCTCTTGAACACCAAGCCCGTTTCCCCACACCCAGGAAAGAGCAATTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
||
| CDS-3UTR CAA 90 bp | TGCATACAAGAACTAGGGTTTCCCAGGAAACAGATATCAGTATGTGCAATGCATCCGAGCAGCAGATACTaGATGCACCGCAGGCCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: CIQELGFPRKQISVCAMHPSSRY*MHRRPP Trigger: CGGGGGCCTGCGGTGCATCAAGTATCTGCTGCTCGG...ATGCATTGCACATACTGATATCTGTTTCCTGGGAAACCCTAGTTCTTGTATGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
||
| CDS CCA 90 bp | TTTTGTCGATGCAATTCTTGTGGCCTGGGAGCTCCTTTGGACACGTaGGCTGGACTTGCTCAGAGCTTTCTTTTCCACAGCACTGAAATG | + |
|
Preference number: 5 (lower is better) Translates to: FCRCNSCGLGAPLDT*AGLAQSFLFHSTEM Trigger: CATTTCAGTGCTGTGGAAAAGAAAGCTCTGAGCAAGTCCAGCCCACGTGTCCAAAGGAGCTCCCAGGCCACAAGAATTGCATCGACAAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 ENSMUST00000197345.2 |
||
| CDS CCA 90 bp | GGTTTCAATTTTGTCGATGCAATTCTTGTGGCCTGGGAGCTCCTTTaGACACGTGGGCTGGACTTGCTCAGAGCTTTCTTTTCCACAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GFNFVDAILVAWELL*TRGLDLLRAFFSTA Trigger: TGCTGTGGAAAAGAAAGCTCTGAGCAAGTCCAGCCCACGTGTCCAAAGGAGCTCCCAGGCCACAAGAATTGCATCGACAAAATTGAAACC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 ENSMUST00000197345.2 |
||
| CDS-3UTR CAA 90 bp | TTGCATACAAGAACTAGGGTTTCCCAGGAAACAGATATCAGTATGTGCAATGCAGGCCTGGGAGCTCCTTaGGACACGTGGGCTGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: LHTRTRVSQETDISMCNAGLGAP*DTWAGL Trigger: AAGTCCAGCCCACGTGTCCAAAGGAGCTCCCAGGCC...TGCATTGCACATACTGATATCTGTTTCCTGGGAAACCCTAGTTCTTGTATGCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
||
| CDS TCA 90 bp | GGGCTGGACTTGCTCAGAGCTTTCTTTTCCACAGCACTGAAATGCTaGGTGGAAGGTAATGAGAGTTCCATTTCCTCTTGCCCTGTCTTT | + |
|
Preference number: 5 (lower is better) Translates to: GLDLLRAFFSTALKC*VEGNESSISSCPVF Trigger: AAAGACAGGGCAAGAGGAAATGGAACTCTCATTACCTTCCACTCAGCATTTCAGTGCTGTGGAAAAGAAAGCTCTGAGCAAGTCCAGCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 ENSMUST00000197345.2 |
||
| CDS-3UTR CAA 90 bp | TGCATACAAGAACTAGGGTTTCCCAGGAAACAGATATCAGTATGTGCAATGCATAGCCAGAACAGCAGGTaGAAGCCGAGCAGCAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: CIQELGFPRKQISVCAMHSQNSR*KPSSRY Trigger: GTATCTGCTGCTCGGCTTCAACCTGCTGTTCTGGCT...ATGCATTGCACATACTGATATCTGTTTCCTGGGAAACCCTAGTTCTTGTATGCA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029451.12 |
||
| CDS-3UTR CAA 90 bp | CTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTCCTGATGAAGTATCAGGCCTGGGAGCTCCTTaGGACACGTGGGCTGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: LVIISTTTLDCNFPDEVSGLGAP*DTWAGL Trigger: AAGTCCAGCCCACGTGTCCAAAGGAGCTCCCAGGCC...TGATACTTCATCAGGAAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
||
| CDS-3UTR CAA 90 bp | ACATTAAGAACATTAGTGACAGATCAGCTGTGGATTACAAACAGAAAATGGCAAGGCCTGGGAGCTCCTTaGGACACGTGGGCTGGACTT | + |
|
Preference number: 5 (lower is better) Translates to: TLRTLVTDQLWITNRKWQGLGAP*DTWAGL Trigger: AAGTCCAGCCCACGTGTCCAAAGGAGCTCCCAGGCC...TTGCCATTTTCTGTTTGTAATCCACAGCTGATCTGTCACTAATGTTCTTAATGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197345.2 |
||
| CDS-3UTR CAA 90 bp | TCTTGCATACAAGAACTAGGGTTTCCCAGGAAACAGATATCAGTATGTGCAATGCGCGTGAGTTCCGTATaGCACAGCAAAGCACCATGC | + |
|
Preference number: 5 (lower is better) Translates to: SCIQELGFPRKQISVCAMRVSSV*HSKAPC Trigger: GCATGGTGCTTTGCTGTGCAATACGGAACTCACGCG...CATTGCACATACTGATATCTGTTTCCTGGGAAACCCTAGTTCTTGTATGCAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
||
| CDS-3UTR CAA 90 bp | GCTCTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTCCTGATGAAGTACGCGTGAGTTCCGTATaGCACAGCAAAGCACCATGC | + |
|
Preference number: 5 (lower is better) Translates to: ALVIISTTTLDCNFPDEVRVSSV*HSKAPC Trigger: GCATGGTGCTTTGCTGTGCAATACGGAACTCACGCG...TACTTCATCAGGAAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
||
| CDS GCA 90 bp | AGTTCCGTGAGACCCGCAATCCCAATACCAACAATTCCAATGAGCTaGAGTTTAGCACTGATTACGGTTTCAATTTTGTCGATGCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: SSVRPAIPIPTIPMS*SLALITVSILSMQF Trigger: GAATTGCATCGACAAAATTGAAACCGTAATCAGTGCTAAACTGCAGCTCATTGGAATTGTTGGTATTGGGATTGCGGGTCTCACGGAACT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197345.2 |
||
| CDS GCA 90 bp | AAGATCGTGAGACCCGCAATCCCAATACCAACAATTCCAATGAGCTaGAGTTTAGCACTGATTACGGTTTCAATTTTGTCGATGCAATTC | + |
|
Preference number: 5 (lower is better) Translates to: KIVRPAIPIPTIPMS*SLALITVSILSMQF Trigger: GAATTGCATCGACAAAATTGAAACCGTAATCAGTGCTAAACTGCAGCTCATTGGAATTGTTGGTATTGGGATTGCGGGTCTCACGATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
||
| CDS-3UTR CAA 90 bp | TTGCATACAAGAACTAGGGTTTCCCAGGAAACAGATATCAGTATGTGCAATGCAAAATACTCTGGGGACTaGTCCTCTGATGATAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: LHTRTRVSQETDISMCNAKYSGD*SSDDKS Trigger: GGATTTATCATCAGAGGACAAGTCCCCAGAGTATTT...TGCATTGCACATACTGATATCTGTTTCCTGGGAAACCCTAGTTCTTGTATGCAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
||
| CDS-3UTR CAA 90 bp | GCCGAGAGAGCTCTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTCCTATTACGGTTTCAATTTaGTCGATGCAATTCTTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: AERALVIISTTTLDCNFPITVSI*SMQFLW Trigger: CCACAAGAATTGCATCGACAAAATTGAAACCGTAAT...AGGAAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAGAGCTCTCTCGGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 |
||
| CDS-3UTR CAA 90 bp | GCTCTTGTGATAATTAGCACGACAACTCTAGATTGCAATTTTCCTGATGAAGTAAAATACTCTGGGGACTaGTCCTCTGATGATAAATCC | + |
|
Preference number: 5 (lower is better) Translates to: ALVIISTTTLDCNFPDEVKYSGD*SSDDKS Trigger: GGATTTATCATCAGAGGACAAGTCCCCAGAGTATTT...TACTTCATCAGGAAAATTGCAATCTAGAGTTGTCGTGCTAATTATCACAAGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
||
| CDS-3UTR CAA 90 bp | TCTTGCATACAAGAACTAGGGTTTCCCAGGAAACAGATATCAGTATGTGCAATGATTACGGTTTCAATTTaGTCGATGCAATTCTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: SCIQELGFPRKQISVCAMITVSI*SMQFLW Trigger: CCACAAGAATTGCATCGACAAAATTGAAACCGTAAT...CATTGCACATACTGATATCTGTTTCCTGGGAAACCCTAGTTCTTGTATGCAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
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| CDS-3UTR CAA 90 bp | GTTTCCCAGGAAACAGATATCAGTATGTGCAATGCATATACCAGAAACAGACATCGTATAGCTACATCCTaGCCTATAAATGCAAATACT | + |
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Preference number: 5 (lower is better) Translates to: VSQETDISMCNAYTRNRHRIATS*PINANT Trigger: AGTATTTGCATTTATAGGCAAGGATGTAGCTATACG...ATGTCTGTTTCTGGTATATGCATTGCACATACTGATATCTGTTTCCTGGGAAAC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
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| CDS-3UTR CAA 90 bp | ATAGGTTATTCTTGCATACAAGAACTAGGGTTTCCCAGGAAACAGATATCAGTAATTACGGTTTCAATTTaGTCGATGCAATTCTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: IGYSCIQELGFPRKQISVITVSI*SMQFLW Trigger: CCACAAGAATTGCATCGACAAAATTGAAACCGTAAT...TACTGATATCTGTTTCCTGGGAAACCCTAGTTCTTGTATGCAAGAATAACCTAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
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| CDS-3UTR CAA 90 bp | ACATTAAGAACATTAGTGACAGATCAGCTGTGGATTACAAACAGAAAATGGCAAATTACGGTTTCAATTTaGTCGATGCAATTCTTGTGG | + |
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Preference number: 5 (lower is better) Translates to: TLRTLVTDQLWITNRKWQITVSI*SMQFLW Trigger: CCACAAGAATTGCATCGACAAAATTGAAACCGTAAT...TTGCCATTTTCTGTTTGTAATCCACAGCTGATCTGTCACTAATGTTCTTAATGT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000197345.2 |
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| CDS CCA 72 bp | CATAGTCCAAATGCAATAACGGCTGATCCGGCTAGCTaGCGCCACCCGCCGGGCGATGCCGCCGAAGATGAT | + |
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Preference number: 6 (lower is better) Translates to: HSPNAITADPAS*RHPPGDAAEDD Trigger: ATCATCTTCGGCGGCATCGCCCGGCGGGTGGCGCCAGCTAGCCGGATCAGCCGTTATTGCATTTGGACTATG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000119902.6 |
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| CDS CAA 90 bp | CGGTTTCAATTTTGTCGATGCAATTCTTGTGGCCTGGGAGCTCCTTaGGACACGTGGGCTGGACTTGCTCAGAGCTTTCTTTTCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: RFQFCRCNSCGLGAP*DTWAGLAQSFLFHS Trigger: GCTGTGGAAAAGAAAGCTCTGAGCAAGTCCAGCCCACGTGTCCAAAGGAGCTCCCAGGCCACAAGAATTGCATCGACAAAATTGAAACCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 ENSMUST00000197345.2 |
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| CDS CCA 72 bp | TTTGTCGATGCAATTCTTGTGGCCTGGGAGCTCCTTTaGACACGTGGGCTGGACTTGCTCAGAGCTTTCTTT | + |
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Preference number: 6 (lower is better) Translates to: FVDAILVAWELL*TRGLDLLRAFF Trigger: AAAGAAAGCTCTGAGCAAGTCCAGCCCACGTGTCCAAAGGAGCTCCCAGGCCACAAGAATTGCATCGACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 ENSMUST00000197345.2 |
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| CDS CCA 72 bp | TACGGTTTCAATTTTGTCGATGCAATTCTTGTGGCCTaGGAGCTCCTTTGGACACGTGGGCTGGACTTGCTC | + |
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Preference number: 6 (lower is better) Translates to: YGFNFVDAILVA*ELLWTRGLDLL Trigger: GAGCAAGTCCAGCCCACGTGTCCAAAGGAGCTCCCAGGCCACAAGAATTGCATCGACAAAATTGAAACCGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 ENSMUST00000197345.2 |
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| CDS CAA 72 bp | GCACTGATTACGGTTTCAATTTTGTCGATGCAATTCTaGTGGCCTGGGAGCTCCTTTGGACACGTGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: ALITVSILSMQF*WPGSSFGHVGW Trigger: CCAGCCCACGTGTCCAAAGGAGCTCCCAGGCCACAAGAATTGCATCGACAAAATTGAAACCGTAATCAGTGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 ENSMUST00000197345.2 |
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| CDS CCA 72 bp | CTGATTACGGTTTCAATTTTGTCGATGCAATTCTTGTaGCCTGGGAGCTCCTTTGGACACGTGGGCTGGACT | + |
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Preference number: 6 (lower is better) Translates to: LITVSILSMQFL*PGSSFGHVGWT Trigger: AGTCCAGCCCACGTGTCCAAAGGAGCTCCCAGGCCACAAGAATTGCATCGACAAAATTGAAACCGTAATCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 ENSMUST00000197345.2 |
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| CDS CAA 90 bp | TGCAGTTTAGCACTGATTACGGTTTCAATTTTGTCGATGCAATTCTaGTGGCCTGGGAGCTCCTTTGGACACGTGGGCTGGACTTGCTCA | + |
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Preference number: 6 (lower is better) Translates to: CSLALITVSILSMQF*WPGSSFGHVGWTCS Trigger: TGAGCAAGTCCAGCCCACGTGTCCAAAGGAGCTCCCAGGCCACAAGAATTGCATCGACAAAATTGAAACCGTAATCAGTGCTAAACTGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 ENSMUST00000197345.2 |
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| CDS CAA 90 bp | ACAATTCCAATGAGCTGCAGTTTAGCACTGATTACGGTTTCAATTTaGTCGATGCAATTCTTGTGGCCTGGGAGCTCCTTTGGACACGTG | + |
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Preference number: 6 (lower is better) Translates to: TIPMSCSLALITVSI*SMQFLWPGSSFGHV Trigger: CACGTGTCCAAAGGAGCTCCCAGGCCACAAGAATTGCATCGACAAAATTGAAACCGTAATCAGTGCTAAACTGCAGCTCATTGGAATTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 ENSMUST00000197345.2 |
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| CDS CAA 72 bp | ATGAGCTGCAGTTTAGCACTGATTACGGTTTCAATTTaGTCGATGCAATTCTTGTGGCCTGGGAGCTCCTTT | + |
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Preference number: 6 (lower is better) Translates to: MSCSLALITVSI*SMQFLWPGSSF Trigger: AAAGGAGCTCCCAGGCCACAAGAATTGCATCGACAAAATTGAAACCGTAATCAGTGCTAAACTGCAGCTCAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 ENSMUST00000196611.5 ENSMUST00000197345.2 |
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| CDS CCA 72 bp | ACTCTGGGGACTTGTCCTCTGATGATAAATCCTTCATaGTACCTCCAAATCGAAACCATAGTCCAAATGCAA | + |
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Preference number: 6 (lower is better) Translates to: TLGTCPLMINPS*YLQIETIVQMQ Trigger: TTGCATTTGGACTATGGTTTCGATTTGGAGGTACCATGAAGGATTTATCATCAGAGGACAAGTCCCCAGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029451.12 ENSMUST00000119902.6 |
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