Pregenerated sensors for TSPAN14 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000037824Ensembl transcript IDs: ENSMUST00000047652.6, ENSMUST00000224209.2
Found 147 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CAGCACCAGCTGTCTGTGCTTGCCAGGGCCTGGCTGCAGGAGCGTTaGCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGGT | + |
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Preference number: 1 (lower is better) Translates to: QHQLSVLARAWLQER*PPGTAYFGPLAVCG Trigger: ACCACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAGCCAGGCCCTGGCAAGCACAGACAGCTGGTGCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR CCA 90 bp | ACTGAGCATTCCACACAGCACCAGCTGTCTGTGCTTGCCAGGGCCTaGCTGCAGGAGCGTTGCCCTCCAGGGACAGCATACTTTGGGCCA | + |
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Preference number: 1 (lower is better) Translates to: TEHSTQHQLSVLARA*LQERCPPGTAYFGP Trigger: TGGCCCAAAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAGCCAGGCCCTGGCAAGCACAGACAGCTGGTGCTGTGTGGAATGCTCAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR TCA 90 bp | CCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGGTCGTaGGAGGAACCCAGTTTCCAGCTGGCAATCAGGAGCTGGGGCTCC | + |
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Preference number: 1 (lower is better) Translates to: PSRDSILWATSCMWS*EEPSFQLAIRSWGS Trigger: GGAGCCCCAGCTCCTGATTGCCAGCTGGAAACTGGGTTCCTCTCACGACCACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR CCA 90 bp | GAGAGGAACCCAGTTTCCAGCTGGCAATCAGGAGCTGGGGCTCCCTaGAGGGCAGCGGGGAAGGAGAAAGGGTCAGTCAGGATTCAAGTT | + |
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Preference number: 1 (lower is better) Translates to: ERNPVSSWQSGAGAP*RAAGKEKGSVRIQV Trigger: AACTTGAATCCTGACTGACCCTTTCTCCTTCCCCGCTGCCCTCCAGGGAGCCCCAGCTCCTGATTGCCAGCTGGAAACTGGGTTCCTCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR GCA 90 bp | CACGGCATGTGGGTGGGGGAGTCACCACGGAAGTTAGAGATAAGATaGACTGAGCATTCCACACAGCACCAGCTGTCTGTGCTTGCCAGG | + |
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Preference number: 1 (lower is better) Translates to: HGMWVGESPRKLEIR*TEHSTQHQLSVLAR Trigger: CCTGGCAAGCACAGACAGCTGGTGCTGTGTGGAATGCTCAGTGCATCTTATCTCTAACTTCCGTGGTGACTCCCCCACCCACATGCCGTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR CCA 90 bp | GGATTCTGCAAACCCCTGGCATGTTTGCACCACCACGAACCCTGTTaGCACGAGGGTACCACTAGACCACTCATCCCTCCTCCTCCTTCT | + |
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Preference number: 1 (lower is better) Translates to: GFCKPLACLHHHEPC*HEGTTRPLIPPPPS Trigger: AGAAGGAGGAGGAGGGATGAGTGGTCTAGTGGTACCCTCGTGCCAACAGGGTTCGTGGTGGTGCAAACATGCCAGGGGTTTGCAGAATCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR TCA 90 bp | AGGACCGGCTATGGCTGGCTCAGGCATAATTCACTTGGACATGGCTaGGGATTCTGCAAACCCCTGGCATGTTTGCACCACCACGAACCC | + |
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Preference number: 1 (lower is better) Translates to: RTGYGWLRHNSLGHG*GFCKPLACLHHHEP Trigger: GGGTTCGTGGTGGTGCAAACATGCCAGGGGTTTGCAGAATCCTCAGCCATGTCCAAGTGAATTATGCCTGAGCCAGCCATAGCCGGTCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR TCA 90 bp | TGGCACGAGGGTACCACTAGACCACTCATCCCTCCTCCTCCTTCTTaGTCAGATGGAACCAGAAGCCTTGTCCTCAGTGCTGGTCCCATA | + |
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Preference number: 1 (lower is better) Translates to: WHEGTTRPLIPPPPS*SDGTRSLVLSAGPI Trigger: TATGGGACCAGCACTGAGGACAAGGCTTCTGGTTCCATCTGATCAAGAAGGAGGAGGAGGGATGAGTGGTCTAGTGGTACCCTCGTGCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR GCA 90 bp | ATTCACTTGGACATGGCTGAGGATTCTGCAAACCCCTGGCATGTTTaGACCACCACGAACCCTGTTGGCACGAGGGTACCACTAGACCAC | + |
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Preference number: 1 (lower is better) Translates to: IHLDMAEDSANPWHV*TTTNPVGTRVPLDH Trigger: GTGGTCTAGTGGTACCCTCGTGCCAACAGGGTTCGTGGTGGTGCAAACATGCCAGGGGTTTGCAGAATCCTCAGCCATGTCCAAGTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR TCA 90 bp | AGAGGGAGAAGCTGTCACAGCTGGTTCTTAAGACACTCGGGGAACTaGAAAGGACAGCTTGGTCCCAGACACTGGGTAAGGCTGCTGAGA | + |
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Preference number: 1 (lower is better) Translates to: RGRSCHSWFLRHSGN*KGQLGPRHWVRLLR Trigger: TCTCAGCAGCCTTACCCAGTGTCTGGGACCAAGCTGTCCTTTTCAGTTCCCCGAGTGTCTTAAGAACCAGCTGTGACAGCTTCTCCCTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR CCA 90 bp | GGGGTCTGGTTGTGGGTGGCTAATGTCGACTTCTGCTGCTGCTGCTaGACAGTGAAAGGCTTGACCTCTACATGTGGCTCAACTCCATTT | + |
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Preference number: 1 (lower is better) Translates to: GVWLWVANVDFCCCC*TVKGLTSTCGSTPF Trigger: AAATGGAGTTGAGCCACATGTAGAGGTCAAGCCTTTCACTGTCCAGCAGCAGCAGCAGAAGTCGACATTAGCCACCCACAACCAGACCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR CCA 90 bp | CTGAGAGGTCATATCACACTGATGCCGAAGACTGGGGTCTGGTTGTaGGTGGCTAATGTCGACTTCTGCTGCTGCTGCTGGACAGTGAAA | + |
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Preference number: 1 (lower is better) Translates to: LRGHITLMPKTGVWL*VANVDFCCCCWTVK Trigger: TTTCACTGTCCAGCAGCAGCAGCAGAAGTCGACATTAGCCACCCACAACCAGACCCCAGTCTTCGGCATCAGTGTGATATGACCTCTCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR CCA 90 bp | TCAGGCATAATTCACTTGGACATGGCTGAGGATTCTGCAAACCCCTaGCATGTTTGCACCACCACGAACCCTGTTGGCACGAGGGTACCA | + |
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Preference number: 1 (lower is better) Translates to: SGIIHLDMAEDSANP*HVCTTTNPVGTRVP Trigger: TGGTACCCTCGTGCCAACAGGGTTCGTGGTGGTGCAAACATGCCAGGGGTTTGCAGAATCCTCAGCCATGTCCAAGTGAATTATGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR CCA 90 bp | AAGAAACTGAGAGGTCATATCACACTGATGCCGAAGACTGGGGTCTaGTTGTGGGTGGCTAATGTCGACTTCTGCTGCTGCTGCTGGACA | + |
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Preference number: 1 (lower is better) Translates to: KKLRGHITLMPKTGV*LWVANVDFCCCCWT Trigger: TGTCCAGCAGCAGCAGCAGAAGTCGACATTAGCCACCCACAACCAGACCCCAGTCTTCGGCATCAGTGTGATATGACCTCTCAGTTTCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR CCA 90 bp | TTTCAAGAGCAGCCTCAGAACAGTGCTGACAGTGAACACGGCATGTaGGTGGGGGAGTCACCACGGAAGTTAGAGATAAGATGCACTGAG | + |
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Preference number: 1 (lower is better) Translates to: FQEQPQNSADSEHGM*VGESPRKLEIRCTE Trigger: CTCAGTGCATCTTATCTCTAACTTCCGTGGTGACTCCCCCACCCACATGCCGTGTTCACTGTCAGCACTGTTCTGAGGCTGCTCTTGAAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR CCA 90 bp | ATGCTCTTGGGCTCCATAAGGGCCATCAAGCCTTTCCTGCAGCCATaGGAGCCATCTGTCCTCAGAGTTACTACTCCACATAAAAACACA | + |
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Preference number: 1 (lower is better) Translates to: MLLGSIRAIKPFLQP*EPSVLRVTTPHKNT Trigger: TGTGTTTTTATGTGGAGTAGTAACTCTGAGGACAGATGGCTCCCATGGCTGCAGGAAAGGCTTGATGGCCCTTATGGAGCCCAAGAGCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR TCA 90 bp | GATCAGATGGAACCAGAAGCCTTGTCCTCAGTGCTGGTCCCATACTaGTGCTATACCCACAGAAGATATGAGCTGAGCATCTACCTAAGC | + |
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Preference number: 1 (lower is better) Translates to: DQMEPEALSSVLVPY*CYTHRRYELSIYLS Trigger: GCTTAGGTAGATGCTCAGCTCATATCTTCTGTGGGTATAGCATCAGTATGGGACCAGCACTGAGGACAAGGCTTCTGGTTCCATCTGATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR TCA 90 bp | CTGCTGAGAAAAGAATGCCAGACGGAAGAGGCTATGAAGATATGGTaGAGGAACACTCTTACCCCTATAAATAAACTATTTACACACTAT | + |
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Preference number: 1 (lower is better) Translates to: LLRKECQTEEAMKIW*RNTLTPINKLFTHY Trigger: ATAGTGTGTAAATAGTTTATTTATAGGGGTAAGAGTGTTCCTTCACCATATCTTCATAGCCTCTTCCGTCTGGCATTCTTTTCTCAGCAG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR GCA 90 bp | ATAAAGATATATTCCATAAAAGAGTTTGGCAGGTCAAAGAGAAGCTaGACACTTCCTAAAAACACAAGCATTCTTCTTCCTCTAGTCTAT | + |
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Preference number: 1 (lower is better) Translates to: IKIYSIKEFGRSKRS*TLPKNTSILLPLVY Trigger: ATAGACTAGAGGAAGAAGAATGCTTGTGTTTTTAGGAAGTGTGCAGCTTCTCTTTGACCTGCCAAACTCTTTTATGGAATATATCTTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGCTTGCCAGGGCCTGGCTGCAGGAGCGTTGCCCTCCAGGGACAGCATACTTCTGGCAATCAGGAGCTaGGGCTCCCTGGAGGGCAGC | + |
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Preference number: 2 (lower is better) Translates to: CACQGLAAGALPSRDSILLAIRS*GSLEGS Trigger: GCTGCCCTCCAGGGAGCCCCAGCTCCTGATTGCCAG...AAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAGCCAGGCCCTGGCAAGCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGCACTAGAGAGTAGCCCAGCCCCAGGTGGACAGACGCCAGCATGCCTCGGAGAGGAGGCAGAGGCCTaGAGATGCTCTTGGGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: EALESSPAPGGQTPACLGEEAEA*RCSWAP Trigger: TGGAGCCCAAGAGCATCTGCAGGCCTCTGCCTCCTC...TCCGAGGCATGCTGGCGTCTGTCCACCTGGGGCTGGGCTACTCTCTAGTGCTTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR CAA 90 bp | ACAGCACCAGCTGTCTGTGCTTGCCAGGGCCTGGCTGCAGGAGCGTaGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGG | + |
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Preference number: 2 (lower is better) Translates to: TAPAVCACQGLAAGA*PSRDSILWATSCMW Trigger: CCACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAGCCAGGCCCTGGCAAGCACAGACAGCTGGTGCTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAACCCCTGGCATGTTTGCACCACCACGAACCCTGTTGGCACGAGGGTACCAGAGGAGGCAGAGGCCTaGAGATGCTCTTGGGCTCCA | + |
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Preference number: 2 (lower is better) Translates to: ANPWHVCTTTNPVGTRVPEEAEA*RCSWAP Trigger: TGGAGCCCAAGAGCATCTGCAGGCCTCTGCCTCCTC...TGGTACCCTCGTGCCAACAGGGTTCGTGGTGGTGCAAACATGCCAGGGGTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCACTAGAGAGTAGCCCAGCCCCAGGTGGACAGACGCCAGCATGCCTCGGAGAGGCTGTTCTACCCTaGGAGAGCAGTGTAGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: EALESSPAPGGQTPACLGEAVLP*ESSVGL Trigger: CAAGCCTACACTGCTCTCCCAGGGTAGAACAGCCTC...TCCGAGGCATGCTGGCGTCTGTCCACCTGGGGCTGGGCTACTCTCTAGTGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGAGCAGCCTCAGAACAGTGCTGACAGTGAACACGGCATGTGGGTGGGGGAGCTACCTAAGCCTTACTaGGGAGGCAGAGGCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: QEQPQNSADSEHGMWVGELPKPY*GGRGLQ Trigger: CTGCAGGCCTCTGCCTCCTCAGTAAGGCTTAGGTAG...CTCCCCCACCCACATGCCGTGTTCACTGTCAGCACTGTTCTGAGGCTGCTCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR TCA 90 bp | TGTGCTTGCCAGGGCCTGGCTGCAGGAGCGTTGCCCTCCAGGGACAGCATACTTCCTCCTCCTCCTTCTTaGTCAGATGGAACCAGAAGC | + |
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Preference number: 2 (lower is better) Translates to: CACQGLAAGALPSRDSILPPPPS*SDGTRS Trigger: GCTTCTGGTTCCATCTGATCAAGAAGGAGGAGGAGG...AAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAGCCAGGCCCTGGCAAGCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR GCA 90 bp | TGTGCTTGCCAGGGCCTGGCTGCAGGAGCGTTGCCCTCCAGGGACAGCATACTTGACTTCTGCTGCTGCTaGTGGACAGTGAAAGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: CACQGLAAGALPSRDSILDFCCC*WTVKGL Trigger: CAAGCCTTTCACTGTCCAGCAGCAGCAGCAGAAGTC...AAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAGCCAGGCCCTGGCAAGCACA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR CCA 90 bp | TGTGCTTGCCAGGGCCTGGCTGCAGGAGCGTTGCCCTCCAGGGACAGCATACTTGATTCTGCAAACCCCTaGCATGTTTGCACCACCACG | + |
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Preference number: 2 (lower is better) Translates to: CACQGLAAGALPSRDSILDSANP*HVCTTT Trigger: CGTGGTGGTGCAAACATGCCAGGGGTTTGCAGAATC...AAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAGCCAGGCCCTGGCAAGCACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR CCA 90 bp | GCAAACCCCTGGCATGTTTGCACCACCACGAACCCTGTTGGCACGAGGGTACCACCGAAGACTGGGGTCTaGTTGTGGGTGGCTAATGTC | + |
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Preference number: 2 (lower is better) Translates to: ANPWHVCTTTNPVGTRVPPKTGV*LWVANV Trigger: GACATTAGCCACCCACAACCAGACCCCAGTCTTCGG...TGGTACCCTCGTGCCAACAGGGTTCGTGGTGGTGCAAACATGCCAGGGGTTTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR TCA 90 bp | CTGCAGGAGCGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTTCAAGTGTGGGCAGATaGGAAGGGGCCTTGGTCTTC | + |
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Preference number: 2 (lower is better) Translates to: LQERCPPGTAYFGPLAVCSSVGR*EGALVF Trigger: GAAGACCAAGGCCCCTTCTCATCTGCCCACACTTGA...ACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGCACTAGAGAGTAGCCCAGCCCCAGGTGGACAGACGCCAGCATGCCTCGGAAATGTCGACTTCTGCTaGTGCTGCTGGACAGTGAAA | + |
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Preference number: 2 (lower is better) Translates to: EALESSPAPGGQTPACLGNVDFC*CCWTVK Trigger: TTTCACTGTCCAGCAGCAGCAGCAGAAGTCGACATT...TCCGAGGCATGCTGGCGTCTGTCCACCTGGGGCTGGGCTACTCTCTAGTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR GCA 90 bp | GCAAACCCCTGGCATGTTTGCACCACCACGAACCCTGTTGGCACGAGGGTACCAGCTAATGTCGACTTCTaGTGCTGCTGCTGGACAGTG | + |
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Preference number: 2 (lower is better) Translates to: ANPWHVCTTTNPVGTRVPANVDF*CCCWTV Trigger: CACTGTCCAGCAGCAGCAGCAGAAGTCGACATTAGC...TGGTACCCTCGTGCCAACAGGGTTCGTGGTGGTGCAAACATGCCAGGGGTTTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGCACTAGAGAGTAGCCCAGCCCCAGGTGGACAGACGCCAGCATGCCTCGGACACATTCTCTGTCTCTaGGCAAGCCCTTTTCAGAGA | + |
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Preference number: 2 (lower is better) Translates to: EALESSPAPGGQTPACLGHILCL*ASPFQR Trigger: TCTCTGAAAAGGGCTTGCCCAGAGACAGAGAATGTG...TCCGAGGCATGCTGGCGTCTGTCCACCTGGGGCTGGGCTACTCTCTAGTGCTTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR CAA 90 bp | ATGTGCTCCCCAGGACCGGCTATGGCTGGCTCAGGCATAATTCACTaGGACATGGCTGAGGATTCTGCAAACCCCTGGCATGTTTGCACC | + |
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Preference number: 2 (lower is better) Translates to: MCSPGPAMAGSGIIH*DMAEDSANPWHVCT Trigger: GGTGCAAACATGCCAGGGGTTTGCAGAATCCTCAGCCATGTCCAAGTGAATTATGCCTGAGCCAGCCATAGCCGGTCCTGGGGAGCACAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR TCA 90 bp | GCTGGCTCAGGCATAATTCACTTGGACATGGCTGAGGATTCTGCAAACCCCTGGCTACCTAAGCCTTACTaGGGAGGCAGAGGCCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: AGSGIIHLDMAEDSANPWLPKPY*GGRGLQ Trigger: CTGCAGGCCTCTGCCTCCTCAGTAAGGCTTAGGTAG...CCAGGGGTTTGCAGAATCCTCAGCCATGTCCAAGTGAATTATGCCTGAGCCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR GCA 90 bp | CGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGGTCGTGAGAACCCCTGGCATGTTTaGACCACCACGAACCCTGTT | + |
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Preference number: 2 (lower is better) Translates to: RCPPGTAYFGPLAVCGRENPWHV*TTTNPV Trigger: AACAGGGTTCGTGGTGGTGCAAACATGCCAGGGGTT...CTCACGACCACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR CCA 90 bp | CGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGGTCGTGAGTTCTGCTGCTGCTGCTaGACAGTGAAAGGCTTGACC | + |
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Preference number: 2 (lower is better) Translates to: RCPPGTAYFGPLAVCGREFCCCC*TVKGLT Trigger: GGTCAAGCCTTTCACTGTCCAGCAGCAGCAGCAGAA...CTCACGACCACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR CCA 90 bp | CTGCAGGAGCGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGATGAGAAGGGGCCTTaGTCTTCAGCACCAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: LQERCPPGTAYFGPLAVCDEKGP*SSAPAR Trigger: TCTTGCTGGTGCTGAAGACCAAGGCCCCTTCTCATC...ACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR CCA 90 bp | CGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGGTCGTGAGGATGAGAAGGGGCCTTaGTCTTCAGCACCAGCAAGA | + |
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Preference number: 2 (lower is better) Translates to: RCPPGTAYFGPLAVCGREDEKGP*SSAPAR Trigger: TCTTGCTGGTGCTGAAGACCAAGGCCCCTTCTCATC...CTCACGACCACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR GCA 90 bp | CATAAGGGCCATCAAGCCTTTCCTGCAGCCATGGGAGCCATCTGTCCTCAGAGTGACTTCTGCTGCTGCTaGTGGACAGTGAAAGGCTTG | + |
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Preference number: 2 (lower is better) Translates to: HKGHQAFPAAMGAICPQSDFCCC*WTVKGL Trigger: CAAGCCTTTCACTGTCCAGCAGCAGCAGCAGAAGTC...ACTCTGAGGACAGATGGCTCCCATGGCTGCAGGAAAGGCTTGATGGCCCTTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR GCA 90 bp | CTGCAGGAGCGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTAAGCCTTGTCCTCAGTaGTGGTCCCATACTGATGCT | + |
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Preference number: 2 (lower is better) Translates to: LQERCPPGTAYFGPLAVCKPCPQ*WSHTDA Trigger: AGCATCAGTATGGGACCAGCACTGAGGACAAGGCTT...ACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR CCA 90 bp | ATAAGATGCACTGAGCATTCCACACAGCACCAGCTGTCTGTGCTTGCCAGGGCCTTCTGCTGCTGCTGCTaGACAGTGAAAGGCTTGACC | + |
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Preference number: 2 (lower is better) Translates to: IRCTEHSTQHQLSVLARAFCCCC*TVKGLT Trigger: GGTCAAGCCTTTCACTGTCCAGCAGCAGCAGCAGAA...GGCCCTGGCAAGCACAGACAGCTGGTGCTGTGTGGAATGCTCAGTGCATCTTAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR-3UTR CCA 90 bp | CATAAGGGCCATCAAGCCTTTCCTGCAGCCATGGGAGCCATCTGTCCTCAGAGTACTGGGGTCTGGTTGTaGGTGGCTAATGTCGACTTC | + |
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Preference number: 2 (lower is better) Translates to: HKGHQAFPAAMGAICPQSTGVWL*VANVDF Trigger: GAAGTCGACATTAGCCACCCACAACCAGACCCCAGT...ACTCTGAGGACAGATGGCTCCCATGGCTGCAGGAAAGGCTTGATGGCCCTTATG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| 3UTR CAA 90 bp | AAACTGAGAGGTCATATCACACTGATGCCGAAGACTGGGGTCTGGTaGTGGGTGGCTAATGTCGACTTCTGCTGCTGCTGCTGGACAGTG | + |
|
Preference number: 2 (lower is better) Translates to: KLRGHITLMPKTGVW*WVANVDFCCCCWTV Trigger: CACTGTCCAGCAGCAGCAGCAGAAGTCGACATTAGCCACCCACAACCAGACCCCAGTCTTCGGCATCAGTGTGATATGACCTCTCAGTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR TCA 90 bp | CAAGAGCAGCCTCAGAACAGTGCTGACAGTGAACACGGCATGTGGGTGGGGGAGGCTATGAAGATATGGTaGAGGAACACTCTTACCCCT | + |
|
Preference number: 2 (lower is better) Translates to: QEQPQNSADSEHGMWVGEAMKIW*RNTLTP Trigger: AGGGGTAAGAGTGTTCCTTCACCATATCTTCATAGC...CTCCCCCACCCACATGCCGTGTTCACTGTCAGCACTGTTCTGAGGCTGCTCTTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR GCA 90 bp | CGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGGTCGTGAGCTGCTGAGAAAAGAATaGCAGACGGAAGAGGCTATG | + |
|
Preference number: 2 (lower is better) Translates to: RCPPGTAYFGPLAVCGRELLRKE*QTEEAM Trigger: CATAGCCTCTTCCGTCTGGCATTCTTTTCTCAGCAG...CTCACGACCACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CCA 90 bp | CAGATGCTCTTGGGCTCCATAAGGGCCATCAAGCCTTTCCTGCAGCCATGGGAGCACATTCTCTGTCTCTaGGCAAGCCCTTTTCAGAGA | + |
|
Preference number: 2 (lower is better) Translates to: QMLLGSIRAIKPFLQPWEHILCL*ASPFQR Trigger: TCTCTGAAAAGGGCTTGCCCAGAGACAGAGAATGTG...CTCCCATGGCTGCAGGAAAGGCTTGATGGCCCTTATGGAGCCCAAGAGCATCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGCAGGAGCGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTCCTTGTCCTCAGTGCTaGTCCCATACTGATGCTATA | + |
|
Preference number: 2 (lower is better) Translates to: LQERCPPGTAYFGPLAVCPCPQC*SHTDAI Trigger: TATAGCATCAGTATGGGACCAGCACTGAGGACAAGG...ACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CCA 90 bp | ATAAGATGCACTGAGCATTCCACACAGCACCAGCTGTCTGTGCTTGCCAGGGCCAGAAGCTGTCACAGCTaGTTCTTAAGACACTCGGGG | + |
|
Preference number: 2 (lower is better) Translates to: IRCTEHSTQHQLSVLARARSCHS*FLRHSG Trigger: CCCCGAGTGTCTTAAGAACCAGCTGTGACAGCTTCT...GGCCCTGGCAAGCACAGACAGCTGGTGCTGTGTGGAATGCTCAGTGCATCTTAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR GCA 90 bp | TCACCAGTATACACCACACTAGAATGTACACTTCGGCAAGTAACTGAAGGTAGTTTGCCAGGGCCTGGCTaGAGGAGCGTTGCCCTCCAG | + |
|
Preference number: 2 (lower is better) Translates to: SPVYTTLECTLRQVTEGSLPGPG*RSVALQ Trigger: CTGGAGGGCAACGCTCCTGCAGCCAGGCCCTGGCAA...ACTACCTTCAGTTACTTGCCGAAGTGTACATTCTAGTGTGGTGTATACTGGTGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTCAGTCAGGATTCAAGTTCTGGTGGCCATTTCAGTAGCACCGAGACCAGAATGCCATGTCAAGTGTaGGCAGATGAGAAGGGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: RVSQDSSSGGHFSSTETRMPCQV*ADEKGP Trigger: AGGCCCCTTCTCATCTGCCCACACTTGACATGGCAT...TCTGGTCTCGGTGCTACTGAAATGGCCACCAGAACTTGAATCCTGACTGACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGCAGGAGCGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTTCCTTCTTGATCAGATaGAACCAGAAGCCTTGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: LQERCPPGTAYFGPLAVCSFLIR*NQKPCP Trigger: AGGACAAGGCTTCTGGTTCCATCTGATCAAGAAGGA...ACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTCAGTCAGGATTCAAGTTCTGGTGGCCATTTCAGTAGCACCGAGACCAGAGATTCTGCAAACCCCTaGCATGTTTGCACCACCACG | + |
|
Preference number: 2 (lower is better) Translates to: RVSQDSSSGGHFSSTETRDSANP*HVCTTT Trigger: CGTGGTGGTGCAAACATGCCAGGGGTTTGCAGAATC...TCTGGTCTCGGTGCTACTGAAATGGCCACCAGAACTTGAATCCTGACTGACCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGTAAGGCTGCTGAGAAAAGAATGCCAGACGGAAGAGGCTATGAAGATATGGAGGCTGTTCTACCCTaGGAGAGCAGTGTAGGCTTG | + |
|
Preference number: 2 (lower is better) Translates to: LGKAAEKRMPDGRGYEDMEAVLP*ESSVGL Trigger: CAAGCCTACACTGCTCTCCCAGGGTAGAACAGCCTC...CATATCTTCATAGCCTCTTCCGTCTGGCATTCTTTTCTCAGCAGCCTTACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGTAAGGCTGCTGAGAAAAGAATGCCAGACGGAAGAGGCTATGAAGATATGAACCCCTGGCATGTTTaGACCACCACGAACCCTGTT | + |
|
Preference number: 2 (lower is better) Translates to: LGKAAEKRMPDGRGYEDMNPWHV*TTTNPV Trigger: AACAGGGTTCGTGGTGGTGCAAACATGCCAGGGGTT...CATATCTTCATAGCCTCTTCCGTCTGGCATTCTTTTCTCAGCAGCCTTACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CCA 90 bp | CTGGGTAAGGCTGCTGAGAAAAGAATGCCAGACGGAAGAGGCTATGAAGATATGACTGGGGTCTGGTTGTaGGTGGCTAATGTCGACTTC | + |
|
Preference number: 2 (lower is better) Translates to: LGKAAEKRMPDGRGYEDMTGVWL*VANVDF Trigger: GAAGTCGACATTAGCCACCCACAACCAGACCCCAGT...CATATCTTCATAGCCTCTTCCGTCTGGCATTCTTTTCTCAGCAGCCTTACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGTTTGGCAGGTCAAAGAGAAGCTGCACACTTCCTAAAAACACAAGCATTCTTCCAAGCAGGGGCGCATaGAGGGGATGTGAACCAGAG | + |
|
Preference number: 2 (lower is better) Translates to: EFGRSKRSCTLPKNTSILPSRGA*RGCEPE Trigger: CTCTGGTTCACATCCCCTCCATGCGCCCCTGCTTGG...AAGAATGCTTGTGTTTTTAGGAAGTGTGCAGCTTCTCTTTGACCTGCCAAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CCA 90 bp | AGGGTCAGTCAGGATTCAAGTTCTGGTGGCCATTTCAGTAGCACCGAGACCAGATCCTTCTTGATCAGATaGAACCAGAAGCCTTGTCCT | + |
|
Preference number: 2 (lower is better) Translates to: RVSQDSSSGGHFSSTETRSFLIR*NQKPCP Trigger: AGGACAAGGCTTCTGGTTCCATCTGATCAAGAAGGA...TCTGGTCTCGGTGCTACTGAAATGGCCACCAGAACTTGAATCCTGACTGACCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGTTTGGCAGGTCAAAGAGAAGCTGCACACTTCCTAAAAACACAAGCATTCTTAGACACTCGGGGAACTaGAAAGGACAGCTTGGTCCC | + |
|
Preference number: 2 (lower is better) Translates to: EFGRSKRSCTLPKNTSILRHSGN*KGQLGP Trigger: GGGACCAAGCTGTCCTTTTCAGTTCCCCGAGTGTCT...AAGAATGCTTGTGTTTTTAGGAAGTGTGCAGCTTCTCTTTGACCTGCCAAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR GCA 90 bp | CTGGGTAAGGCTGCTGAGAAAAGAATGCCAGACGGAAGAGGCTATGAAGATATGAATGTCGACTTCTGCTaGTGCTGCTGGACAGTGAAA | + |
|
Preference number: 2 (lower is better) Translates to: LGKAAEKRMPDGRGYEDMNVDFC*CCWTVK Trigger: TTTCACTGTCCAGCAGCAGCAGCAGAAGTCGACATT...CATATCTTCATAGCCTCTTCCGTCTGGCATTCTTTTCTCAGCAGCCTTACCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGTTTGGCAGGTCAAAGAGAAGCTGCACACTTCCTAAAAACACAAGCATTCTTAAGCCTTGTCCTCAGTaGTGGTCCCATACTGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: EFGRSKRSCTLPKNTSILKPCPQ*WSHTDA Trigger: AGCATCAGTATGGGACCAGCACTGAGGACAAGGCTT...AAGAATGCTTGTGTTTTTAGGAAGTGTGCAGCTTCTCTTTGACCTGCCAAACTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR TCA 90 bp | GAGTTTGGCAGGTCAAAGAGAAGCTGCACACTTCCTAAAAACACAAGCATTCTTAGAGATAAGATGCACTaGGCATTCCACACAGCACCA | + |
|
Preference number: 2 (lower is better) Translates to: EFGRSKRSCTLPKNTSILRDKMH*AFHTAP Trigger: TGGTGCTGTGTGGAATGCTCAGTGCATCTTATCTCT...AAGAATGCTTGTGTTTTTAGGAAGTGTGCAGCTTCTCTTTGACCTGCCAAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR GCA 90 bp | TCACCAGTATACACCACACTAGAATGTACACTTCGGCAAGTAACTGAAGGTAGTCTGCTGAGAAAAGAATaGCAGACGGAAGAGGCTATG | + |
|
Preference number: 2 (lower is better) Translates to: SPVYTTLECTLRQVTEGSLLRKE*QTEEAM Trigger: CATAGCCTCTTCCGTCTGGCATTCTTTTCTCAGCAG...ACTACCTTCAGTTACTTGCCGAAGTGTACATTCTAGTGTGGTGTATACTGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGATATATTCCATAAAAGAGTTTGGCAGGTCAAAGAGAAGCTGCACACTTCCATGCCATGTCAAGTGTaGGCAGATGAGAAGGGGCCT | + |
|
Preference number: 2 (lower is better) Translates to: KDIFHKRVWQVKEKLHTSMPCQV*ADEKGP Trigger: AGGCCCCTTCTCATCTGCCCACACTTGACATGGCAT...GGAAGTGTGCAGCTTCTCTTTGACCTGCCAAACTCTTTTATGGAATATATCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CCA 90 bp | AAAGATATATTCCATAAAAGAGTTTGGCAGGTCAAAGAGAAGCTGCACACTTCCCCTTGTCCTCAGTGCTaGTCCCATACTGATGCTATA | + |
|
Preference number: 2 (lower is better) Translates to: KDIFHKRVWQVKEKLHTSPCPQC*SHTDAI Trigger: TATAGCATCAGTATGGGACCAGCACTGAGGACAAGG...GGAAGTGTGCAGCTTCTCTTTGACCTGCCAAACTCTTTTATGGAATATATCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR TCA 90 bp | AAAGATATATTCCATAAAAGAGTTTGGCAGGTCAAAGAGAAGCTGCACACTTCCACATCATCATCATCATaGACACACCCCCACCAGTAT | + |
|
Preference number: 2 (lower is better) Translates to: KDIFHKRVWQVKEKLHTSTSSSS*THPHQY Trigger: ATACTGGTGGGGGTGTGTTCATGATGATGATGATGT...GGAAGTGTGCAGCTTCTCTTTGACCTGCCAAACTCTTTTATGGAATATATCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR CCA 72 bp | TCCACACAGCACCAGCTGTCTGTGCTTGCCAGGGCCTaGCTGCAGGAGCGTTGCCCTCCAGGGACAGCATAC | + |
|
Preference number: 3 (lower is better) Translates to: STQHQLSVLARA*LQERCPPGTAY Trigger: GTATGCTGTCCCTGGAGGGCAACGCTCCTGCAGCCAGGCCCTGGCAAGCACAGACAGCTGGTGCTGTGTGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR GCA 72 bp | CACAGCACCAGCTGTCTGTGCTTGCCAGGGCCTGGCTaGAGGAGCGTTGCCCTCCAGGGACAGCATACTTTG | + |
|
Preference number: 3 (lower is better) Translates to: HSTSCLCLPGPG*RSVALQGQHTL Trigger: CAAAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAGCCAGGCCCTGGCAAGCACAGACAGCTGGTGCTGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR GCA 72 bp | GATGCACTGAGCATTCCACACAGCACCAGCTGTCTGTaGTTGCCAGGGCCTGGCTGCAGGAGCGTTGCCCTC | + |
|
Preference number: 3 (lower is better) Translates to: DALSIPHSTSCL*LPGPGCRSVAL Trigger: GAGGGCAACGCTCCTGCAGCCAGGCCCTGGCAAGCACAGACAGCTGGTGCTGTGTGGAATGCTCAGTGCATC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR CCA 72 bp | GCTGTATGTGGTCGTGAGAGGAACCCAGTTTCCAGCTaGCAATCAGGAGCTGGGGCTCCCTGGAGGGCAGCG | + |
|
Preference number: 3 (lower is better) Translates to: AVCGRERNPVSS*QSGAGAPWRAA Trigger: CGCTGCCCTCCAGGGAGCCCCAGCTCCTGATTGCCAGCTGGAAACTGGGTTCCTCTCACGACCACATACAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CAA 90 bp | CAAGAGCAGCCTCAGAACAGTGCTGACAGTGAACACGGCATGTGGGTGGGGGAGGGCCTGCAGATGCTCTaGGGCTCCATAAGGGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: QEQPQNSADSEHGMWVGEGLQML*GSIRAI Trigger: GATGGCCCTTATGGAGCCCAAGAGCATCTGCAGGCC...CTCCCCCACCCACATGCCGTGTTCACTGTCAGCACTGTTCTGAGGCTGCTCTTG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGCACTAGAGAGTAGCCCAGCCCCAGGTGGACAGACGCCAGCATGCCTCGGAAAACCCCTGGCATGTTaGCACCACCACGAACCCTGT | + |
|
Preference number: 3 (lower is better) Translates to: EALESSPAPGGQTPACLGKPLAC*HHHEPC Trigger: ACAGGGTTCGTGGTGGTGCAAACATGCCAGGGGTTT...TCCGAGGCATGCTGGCGTCTGTCCACCTGGGGCTGGGCTACTCTCTAGTGCTTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGGTCGTGAGATGGAACCAGAAGCCTaGTCCTCAGTGCTGGTCCCA | + |
|
Preference number: 3 (lower is better) Translates to: RCPPGTAYFGPLAVCGREMEPEA*SSVLVP Trigger: TGGGACCAGCACTGAGGACAAGGCTTCTGGTTCCAT...CTCACGACCACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CAA 90 bp | CGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGGTCGTGAGCCCTCCTCCTCCTTCTaGATCAGATGGAACCAGAAG | + |
|
Preference number: 3 (lower is better) Translates to: RCPPGTAYFGPLAVCGREPSSSF*IRWNQK Trigger: CTTCTGGTTCCATCTGATCAAGAAGGAGGAGGAGGG...CTCACGACCACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR GCA 72 bp | GGGGTCTGGTTGTGGGTGGCTAATGTCGACTTCTGCTaGTGCTGCTGGACAGTGAAAGGCTTGACCTCTACA | + |
|
Preference number: 3 (lower is better) Translates to: GVWLWVANVDFC*CCWTVKGLTST Trigger: TGTAGAGGTCAAGCCTTTCACTGTCCAGCAGCAGCAGCAGAAGTCGACATTAGCCACCCACAACCAGACCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR CCA 72 bp | CATATCACACTGATGCCGAAGACTGGGGTCTGGTTGTaGGTGGCTAATGTCGACTTCTGCTGCTGCTGCTGG | + |
|
Preference number: 3 (lower is better) Translates to: HITLMPKTGVWL*VANVDFCCCCW Trigger: CCAGCAGCAGCAGCAGAAGTCGACATTAGCCACCCACAACCAGACCCCAGTCTTCGGCATCAGTGTGATATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR TCA 72 bp | GACAGCATACTTTGGGCCACTAGCTGTATGTGGTCGTaGGAGGAACCCAGTTTCCAGCTGGCAATCAGGAGC | + |
|
Preference number: 3 (lower is better) Translates to: DSILWATSCMWS*EEPSFQLAIRS Trigger: GCTCCTGATTGCCAGCTGGAAACTGGGTTCCTCTCACGACCACATACAGCTAGTGGCCCAAAGTATGCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR GCA 72 bp | TGGGTGGGGGAGTCACCACGGAAGTTAGAGATAAGATaGACTGAGCATTCCACACAGCACCAGCTGTCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: WVGESPRKLEIR*TEHSTQHQLSV Trigger: CACAGACAGCTGGTGCTGTGTGGAATGCTCAGTGCATCTTATCTCTAACTTCCGTGGTGACTCCCCCACCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR CCA 72 bp | AGAGGTCATATCACACTGATGCCGAAGACTGGGGTCTaGTTGTGGGTGGCTAATGTCGACTTCTGCTGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: RGHITLMPKTGV*LWVANVDFCCC Trigger: GCAGCAGCAGAAGTCGACATTAGCCACCCACAACCAGACCCCAGTCTTCGGCATCAGTGTGATATGACCTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR CCA 72 bp | ATTCACTTGGACATGGCTGAGGATTCTGCAAACCCCTaGCATGTTTGCACCACCACGAACCCTGTTGGCACG | + |
|
Preference number: 3 (lower is better) Translates to: IHLDMAEDSANP*HVCTTTNPVGT Trigger: CGTGCCAACAGGGTTCGTGGTGGTGCAAACATGCCAGGGGTTTGCAGAATCCTCAGCCATGTCCAAGTGAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR TCA 72 bp | AGCTGTCACAGCTGGTTCTTAAGACACTCGGGGAACTaGAAAGGACAGCTTGGTCCCAGACACTGGGTAAGG | + |
|
Preference number: 3 (lower is better) Translates to: SCHSWFLRHSGN*KGQLGPRHWVR Trigger: CCTTACCCAGTGTCTGGGACCAAGCTGTCCTTTTCAGTTCCCCGAGTGTCTTAAGAACCAGCTGTGACAGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR CCA 72 bp | TTGTGGGTGGCTAATGTCGACTTCTGCTGCTGCTGCTaGACAGTGAAAGGCTTGACCTCTACATGTGGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: LWVANVDFCCCC*TVKGLTSTCGS Trigger: TGAGCCACATGTAGAGGTCAAGCCTTTCACTGTCCAGCAGCAGCAGCAGAAGTCGACATTAGCCACCCACAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CAA 90 bp | ATAAGATGCACTGAGCATTCCACACAGCACCAGCTGTCTGTGCTTGCCAGGGCCTCAGGCATAATTCACTaGGACATGGCTGAGGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: IRCTEHSTQHQLSVLARASGIIH*DMAEDS Trigger: AGAATCCTCAGCCATGTCCAAGTGAATTATGCCTGA...GGCCCTGGCAAGCACAGACAGCTGGTGCTGTGTGGAATGCTCAGTGCATCTTAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTTGGCAGGTCAAAGAGAAGCTGCACACTTCCTAAAAACACAAGCATTCTTGGCCTGCAGATGCTCTaGGGCTCCATAAGGGCCATC | + |
|
Preference number: 3 (lower is better) Translates to: EFGRSKRSCTLPKNTSILGLQML*GSIRAI Trigger: GATGGCCCTTATGGAGCCCAAGAGCATCTGCAGGCC...AAGAATGCTTGTGTTTTTAGGAAGTGTGCAGCTTCTCTTTGACCTGCCAAACTC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR TCA 72 bp | GAACCAGAAGCCTTGTCCTCAGTGCTGGTCCCATACTaGTGCTATACCCACAGAAGATATGAGCTGAGCATC | + |
|
Preference number: 3 (lower is better) Translates to: EPEALSSVLVPY*CYTHRRYELSI Trigger: GATGCTCAGCTCATATCTTCTGTGGGTATAGCATCAGTATGGGACCAGCACTGAGGACAAGGCTTCTGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGTTTGGCAGGTCAAAGAGAAGCTGCACACTTCCTAAAAACACAAGCATTCTTAAGACTGGGGTCTGGTaGTGGGTGGCTAATGTCGAC | + |
|
Preference number: 3 (lower is better) Translates to: EFGRSKRSCTLPKNTSILKTGVW*WVANVD Trigger: GTCGACATTAGCCACCCACAACCAGACCCCAGTCTT...AAGAATGCTTGTGTTTTTAGGAAGTGTGCAGCTTCTCTTTGACCTGCCAAACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACCAGTATACACCACACTAGAATGTACACTTCGGCAAGTAACTGAAGGTAGTAAGACTGGGGTCTGGTaGTGGGTGGCTAATGTCGAC | + |
|
Preference number: 3 (lower is better) Translates to: SPVYTTLECTLRQVTEGSKTGVW*WVANVD Trigger: GTCGACATTAGCCACCCACAACCAGACCCCAGTCTT...ACTACCTTCAGTTACTTGCCGAAGTGTACATTCTAGTGTGGTGTATACTGGTGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR CCA 72 bp | TTGATCAGATGGAACCAGAAGCCTTGTCCTCAGTGCTaGTCCCATACTGATGCTATACCCACAGAAGATATG | + |
|
Preference number: 3 (lower is better) Translates to: LIRWNQKPCPQC*SHTDAIPTEDM Trigger: CATATCTTCTGTGGGTATAGCATCAGTATGGGACCAGCACTGAGGACAAGGCTTCTGGTTCCATCTGATCAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR-3UTR CAA 90 bp | TCACCAGTATACACCACACTAGAATGTACACTTCGGCAAGTAACTGAAGGTAGTTCAGGCATAATTCACTaGGACATGGCTGAGGATTCT | + |
|
Preference number: 3 (lower is better) Translates to: SPVYTTLECTLRQVTEGSSGIIH*DMAEDS Trigger: AGAATCCTCAGCCATGTCCAAGTGAATTATGCCTGA...ACTACCTTCAGTTACTTGCCGAAGTGTACATTCTAGTGTGGTGTATACTGGTGA 43% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR GCA 72 bp | TATTCCATAAAAGAGTTTGGCAGGTCAAAGAGAAGCTaGACACTTCCTAAAAACACAAGCATTCTTCTTCCT | + |
|
Preference number: 3 (lower is better) Translates to: YSIKEFGRSKRS*TLPKNTSILLP Trigger: AGGAAGAAGAATGCTTGTGTTTTTAGGAAGTGTGCAGCTTCTCTTTGACCTGCCAAACTCTTTTATGGAATA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR TCA 72 bp | AAAGAATGCCAGACGGAAGAGGCTATGAAGATATGGTaGAGGAACACTCTTACCCCTATAAATAAACTATTT | + |
|
Preference number: 3 (lower is better) Translates to: KECQTEEAMKIW*RNTLTPINKLF Trigger: AAATAGTTTATTTATAGGGGTAAGAGTGTTCCTTCACCATATCTTCATAGCCTCTTCCGTCTGGCATTCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | CAAGAGCAGCCTCAGAACAGTGCTGACAGTGAACACGGCATGTGGGTGGGGGAGACCGGGTCACCTTGGTaGGGTCGGACAGCACACCCT | + |
|
Preference number: 4 (lower is better) Translates to: QEQPQNSADSEHGMWVGETGSPW*GRTAHP Trigger: AGGGTGTGCTGTCCGACCTCACCAAGGTGACCCGGT...CTCCCCCACCCACATGCCGTGTTCACTGTCAGCACTGTTCTGAGGCTGCTCTTG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | CGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGGTCGTGAGCACTGCCTCGATGTCTaGGATCAGGGTCCTCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RCPPGTAYFGPLAVCGREHCLDV*DQGPRQ Trigger: CTGGCGAGGACCCTGATCTCAGACATCGAGGCAGTG...CTCACGACCACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR GCA 90 bp | CAAGAGCAGCCTCAGAACAGTGCTGACAGTGAACACGGCATGTGGGTGGGGGAGACCCTTTTCGCTCCATaGCCACAGCCCGACTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: QEQPQNSADSEHGMWVGETLFAP*PQPDSK Trigger: CTTGGAGTCGGGCTGTGGGCATGGAGCGAAAAGGGT...CTCCCCCACCCACATGCCGTGTTCACTGTCAGCACTGTTCTGAGGCTGCTCTTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | CAAGAGCAGCCTCAGAACAGTGCTGACAGTGAACACGGCATGTGGGTGGGGGAGACTTGTACCAGCAGCTaGCCTCGGCGTTCGAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: QEQPQNSADSEHGMWVGETCTSS*PRRSSI Trigger: GATACTCGAACGCCGAGGTCAGCTGCTGGTACAAGT...CTCCCCCACCCACATGCCGTGTTCACTGTCAGCACTGTTCTGAGGCTGCTCTTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | CTGCAGGAGCGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTCTGCGAATCCCAGTGTaGACATCACCACGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: LQERCPPGTAYFGPLAVCLRIPV*TSPRPP Trigger: TGGTGGGCGTGGTGATGTTCACACTGGGATTCGCAG...ACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | TGTGCTTGCCAGGGCCTGGCTGCAGGAGCGTTGCCCTCCAGGGACAGCATACTTTCTGAAGGGAGTCAATaGGGTTCTGCAGGTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: CACQGLAAGALPSRDSILSEGSQ*GSAGRC Trigger: ACATCGACCTGCAGAACCTCATTGACTCCCTTCAGA...AAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAGCCAGGCCCTGGCAAGCACA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR GCA 90 bp | CGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGGTCGTGAGGGCCCCGACACAGCCTaGGAATCCCAGTGTGAACAT | + |
|
Preference number: 4 (lower is better) Translates to: RCPPGTAYFGPLAVCGREGPDTA*ESQCEH Trigger: ATGTTCACACTGGGATTCGCAGGCTGTGTCGGGGCC...CTCACGACCACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR GCA 90 bp | GAAGCACTAGAGAGTAGCCCAGCCCCAGGTGGACAGACGCCAGCATGCCTCGGATCCTCGCCAGGAAGATaGCAAAAATCTGCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EALESSPAPGGQTPACLGSSPGR*QKSAAV Trigger: CACTGCTGCAGATTTTTGGCATCTTCCTGGCGAGGA...TCCGAGGCATGCTGGCGTCTGTCCACCTGGGGCTGGGCTACTCTCTAGTGCTTC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGCAAGCCCTTTTCAGAGATGCCATGTCAAGTGTGGGCAGATGAGAAGGGGACGGGGTCGATTCCATaGAACCGGGTCACCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGKPFSEMPCQVWADEKGTGSIP*NRVTLV Trigger: CACCAAGGTGACCCGGTTGCATGGAATCGACCCCGT...CCCCTTCTCATCTGCCCACACTTGACATGGCATCTCTGAAAAGGGCTTGCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR GCA 90 bp | TGTGCTTGCCAGGGCCTGGCTGCAGGAGCGTTGCCCTCCAGGGACAGCATACTTGTTCACGACTTTTTGTaGAGGATCTGGCACACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: CACQGLAAGALPSRDSILVHDFL*RIWHTA Trigger: TGCTGTGTGCCAGATCCTGCACAAAAAGTCGTGAAC...AAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAGCCAGGCCCTGGCAAGCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | CGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGGTCGTGAGGTTCCAGGAAGAAGATaGGCACAATGGCCCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: RCPPGTAYFGPLAVCGREVPGRR*AQWPHR Trigger: TCTGTGGGGCCATTGTGCTCATCTTCTTCCTGGAAC...CTCACGACCACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR GCA 90 bp | CTTCTGCTGCTGCTGCTGGACAGTGAAAGGCTTGACCTCTACATGTGGCTCAACACGGGGTCGATTCCATaGAACCGGGTCACCTTGGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLDSERLDLYMWLNTGSIP*NRVTLV Trigger: CACCAAGGTGACCCGGTTGCATGGAATCGACCCCGT...GTTGAGCCACATGTAGAGGTCAAGCCTTTCACTGTCCAGCAGCAGCAGCAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR CAA 72 bp | GGTCATATCACACTGATGCCGAAGACTGGGGTCTGGTaGTGGGTGGCTAATGTCGACTTCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: GHITLMPKTGVW*WVANVDFCCCC Trigger: GCAGCAGCAGCAGAAGTCGACATTAGCCACCCACAACCAGACCCCAGTCTTCGGCATCAGTGTGATATGACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR CAA 72 bp | CCAGGACCGGCTATGGCTGGCTCAGGCATAATTCACTaGGACATGGCTGAGGATTCTGCAAACCCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: PGPAMAGSGIIH*DMAEDSANPWH Trigger: ATGCCAGGGGTTTGCAGAATCCTCAGCCATGTCCAAGTGAATTATGCCTGAGCCAGCCATAGCCGGTCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | GCTGGCTCAGGCATAATTCACTTGGACATGGCTGAGGATTCTGCAAACCCCTGGACTTGTACCAGCAGCTaGCCTCGGCGTTCGAGTATC | + |
|
Preference number: 4 (lower is better) Translates to: AGSGIIHLDMAEDSANPWTCTSS*PRRSSI Trigger: GATACTCGAACGCCGAGGTCAGCTGCTGGTACAAGT...CCAGGGGTTTGCAGAATCCTCAGCCATGTCCAAGTGAATTATGCCTGAGCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTCAGTCAGGATTCAAGTTCTGGTGGCCATTTCAGTAGCACCGAGACCAGACTGCGAATCCCAGTGTaGACATCACCACGCCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: RVSQDSSSGGHFSSTETRLRIPV*TSPRPP Trigger: TGGTGGGCGTGGTGATGTTCACACTGGGATTCGCAG...TCTGGTCTCGGTGCTACTGAAATGGCCACCAGAACTTGAATCCTGACTGACCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGCAAGCCCTTTTCAGAGATGCCATGTCAAGTGTGGGCAGATGAGAAGGGGGTTCCAGGAAGAAGATaGGCACAATGGCCCCACAGA | + |
|
Preference number: 4 (lower is better) Translates to: LGKPFSEMPCQVWADEKGVPGRR*AQWPHR Trigger: TCTGTGGGGCCATTGTGCTCATCTTCTTCCTGGAAC...CCCCTTCTCATCTGCCCACACTTGACATGGCATCTCTGAAAAGGGCTTGCCCAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | CGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGGTCGTGAGGCAGTGAGATGGCAATaGAGACACCAGCCACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: RCPPGTAYFGPLAVCGREAVRWQ*RHQPQC Trigger: ACATTGTGGCTGGTGTCTTCATTGCCATCTCACTGC...CTCACGACCACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR GCA 90 bp | AGGGTCAGTCAGGATTCAAGTTCTGGTGGCCATTTCAGTAGCACCGAGACCAGAACCCTTTTCGCTCCATaGCCACAGCCCGACTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: RVSQDSSSGGHFSSTETRTLFAP*PQPDSK Trigger: CTTGGAGTCGGGCTGTGGGCATGGAGCGAAAAGGGT...TCTGGTCTCGGTGCTACTGAAATGGCCACCAGAACTTGAATCCTGACTGACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR GCA 90 bp | CTGCAGGAGCGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGAGTCAATGAGGTTCTaGAGGTCGATGTCATCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LQERCPPGTAYFGPLAVCESMRF*RSMSSR Trigger: TCGGGATGACATCGACCTGCAGAACCTCATTGACTC...ACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACGCTCCTGCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR GCA 90 bp | CAGATGCTCTTGGGCTCCATAAGGGCCATCAAGCCTTTCCTGCAGCCATGGGAGGAGTCAATGAGGTTCTaGAGGTCGATGTCATCCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QMLLGSIRAIKPFLQPWEESMRF*RSMSSR Trigger: TCGGGATGACATCGACCTGCAGAACCTCATTGACTC...CTCCCATGGCTGCAGGAAAGGCTTGATGGCCCTTATGGAGCCCAAGAGCATCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGCAAGCCCTTTTCAGAGATGCCATGTCAAGTGTGGGCAGATGAGAAGGGGTCAGAAGTGATGGCCTaGCTTCACTGCCTCGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGKPFSEMPCQVWADEKGSEVMA*LHCLDV Trigger: GACATCGAGGCAGTGAAGGCAGGCCATCACTTCTGA...CCCCTTCTCATCTGCCCACACTTGACATGGCATCTCTGAAAAGGGCTTGCCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | GCAAACCCCTGGCATGTTTGCACCACCACGAACCCTGTTGGCACGAGGGTACCAAGACGATATTGTAGCTaGAGAGCAGGTACTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: ANPWHVCTTTNPVGTRVPRRYCS*RAGTCT Trigger: GGTACAAGTACCTGCTCTTCAGCTACAATATCGTCT...TGGTACCCTCGTGCCAACAGGGTTCGTGGTGGTGCAAACATGCCAGGGGTTTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGCAAGCCCTTTTCAGAGATGCCATGTCAAGTGTGGGCAGATGAGAAGGGGTCCTCGCCAGGAAGATaGCAAAAATCTGCAGCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LGKPFSEMPCQVWADEKGSSPGR*QKSAAV Trigger: CACTGCTGCAGATTTTTGGCATCTTCCTGGCGAGGA...CCCCTTCTCATCTGCCCACACTTGACATGGCATCTCTGAAAAGGGCTTGCCCAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| 3UTR CAA 72 bp | GTCGACTTCTGCTGCTGCTGCTGGACAGTGAAAGGCTaGACCTCTACATGTGGCTCAACTCCATTTGCTGCA | + |
|
Preference number: 4 (lower is better) Translates to: VDFCCCCWTVKG*TSTCGSTPFAA Trigger: TGCAGCAAATGGAGTTGAGCCACATGTAGAGGTCAAGCCTTTCACTGTCCAGCAGCAGCAGCAGAAGTCGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | CGTTGCCCTCCAGGGACAGCATACTTTGGGCCACTAGCTGTATGTGGTCGTGAGAGACGATATTGTAGCTaGAGAGCAGGTACTTGTACC | + |
|
Preference number: 4 (lower is better) Translates to: RCPPGTAYFGPLAVCGRERRYCS*RAGTCT Trigger: GGTACAAGTACCTGCTCTTCAGCTACAATATCGTCT...CTCACGACCACATACAGCTAGTGGCCCAAAGTATGCTGTCCCTGGAGGGCAACG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | CAGATGCTCTTGGGCTCCATAAGGGCCATCAAGCCTTTCCTGCAGCCATGGGAGCATCCCGATAGGACTTaGTGTTGCTCTCGAAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: QMLLGSIRAIKPFLQPWEHPDRT*CCSRRI Trigger: AATTCTTCGAGAGCAACATCAAGTCCTATCGGGATG...CTCCCATGGCTGCAGGAAAGGCTTGATGGCCCTTATGGAGCCCAAGAGCATCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGCAAGCCCTTTTCAGAGATGCCATGTCAAGTGTGGGCAGATGAGAAGGGGGTTCACGACTTTTTGTaGAGGATCTGGCACACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: LGKPFSEMPCQVWADEKGVHDFL*RIWHTA Trigger: TGCTGTGTGCCAGATCCTGCACAAAAAGTCGTGAAC...CCCCTTCTCATCTGCCCACACTTGACATGGCATCTCTGAAAAGGGCTTGCCCAG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTCAGTCAGGATTCAAGTTCTGGTGGCCATTTCAGTAGCACCGAGACCAGACCCCACAGAAAAACTTaGGCAGGCAGATGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RVSQDSSSGGHFSSTETRPHRKT*AGRCSL Trigger: GAGAGAACATCTGCCTGCTCAAGTTTTTCTGTGGGG...TCTGGTCTCGGTGCTACTGAAATGGCCACCAGAACTTGAATCCTGACTGACCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTCAGTCAGGATTCAAGTTCTGGTGGCCATTTCAGTAGCACCGAGACCAGATCTGAAGGGAGTCAATaGGGTTCTGCAGGTCGATGT | + |
|
Preference number: 4 (lower is better) Translates to: RVSQDSSSGGHFSSTETRSEGSQ*GSAGRC Trigger: ACATCGACCTGCAGAACCTCATTGACTCCCTTCAGA...TCTGGTCTCGGTGCTACTGAAATGGCCACCAGAACTTGAATCCTGACTGACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | AGGGTCAGTCAGGATTCAAGTTCTGGTGGCCATTTCAGTAGCACCGAGACCAGAGCAGTGAGATGGCAATaGAGACACCAGCCACAATGT | + |
|
Preference number: 4 (lower is better) Translates to: RVSQDSSSGGHFSSTETRAVRWQ*RHQPQC Trigger: ACATTGTGGCTGGTGTCTTCATTGCCATCTCACTGC...TCTGGTCTCGGTGCTACTGAAATGGCCACCAGAACTTGAATCCTGACTGACCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR CCA 90 bp | GCTGGCTCAGGCATAATTCACTTGGACATGGCTGAGGATTCTGCAAACCCCTGGCAGCCTTCCAGAGCCTaGATGCATCCTTTTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: AGSGIIHLDMAEDSANPWQPSRA*MHPFVK Trigger: CTTTACAAAAGGATGCATCCAGGCTCTGGAAGGCTG...CCAGGGGTTTGCAGAATCCTCAGCCATGTCCAAGTGAATTATGCCTGAGCCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | TCACCAGTATACACCACACTAGAATGTACACTTCGGCAAGTAACTGAAGGTAGTCACTGCCTCGATGTCTaGGATCAGGGTCCTCGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SPVYTTLECTLRQVTEGSHCLDV*DQGPRQ Trigger: CTGGCGAGGACCCTGATCTCAGACATCGAGGCAGTG...ACTACCTTCAGTTACTTGCCGAAGTGTACATTCTAGTGTGGTGTATACTGGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR GCA 90 bp | CTGGGTAAGGCTGCTGAGAAAAGAATGCCAGACGGAAGAGGCTATGAAGATATGTCAGAAGTGATGGCCTaGCTTCACTGCCTCGATGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGKAAEKRMPDGRGYEDMSEVMA*LHCLDV Trigger: GACATCGAGGCAGTGAAGGCAGGCCATCACTTCTGA...CATATCTTCATAGCCTCTTCCGTCTGGCATTCTTTTCTCAGCAGCCTTACCCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR CCA 90 bp | CTTCTGCTGCTGCTGCTGGACAGTGAAAGGCTTGACCTCTACATGTGGCTCAACTCTCTCACCCAGTCTTaGAATAAAAAGGCCAACACG | + |
|
Preference number: 4 (lower is better) Translates to: LLLLLLDSERLDLYMWLNSLTQS*NKKANT Trigger: CGTGTTGGCCTTTTTATTCCAAGACTGGGTGAGAGA...GTTGAGCCACATGTAGAGGTCAAGCCTTTCACTGTCCAGCAGCAGCAGCAGAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR CCA 90 bp | TCACCAGTATACACCACACTAGAATGTACACTTCGGCAAGTAACTGAAGGTAGTCAATGTAGATGTTCCTaGGCAGCCAGCCTTCCAGAG | + |
|
Preference number: 4 (lower is better) Translates to: SPVYTTLECTLRQVTEGSQCRCS*AASLPE Trigger: CTCTGGAAGGCTGGCTGCCCAGGAACATCTACATTG...ACTACCTTCAGTTACTTGCCGAAGTGTACATTCTAGTGTGGTGTATACTGGTGA 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | TCACCAGTATACACCACACTAGAATGTACACTTCGGCAAGTAACTGAAGGTAGTCCCCACAGAAAAACTTaGGCAGGCAGATGTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPVYTTLECTLRQVTEGSPHRKT*AGRCSL Trigger: GAGAGAACATCTGCCTGCTCAAGTTTTTCTGTGGGG...ACTACCTTCAGTTACTTGCCGAAGTGTACATTCTAGTGTGGTGTATACTGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR CCA 90 bp | TCACCAGTATACACCACACTAGAATGTACACTTCGGCAAGTAACTGAAGGTAGTCAGCCTTCCAGAGCCTaGATGCATCCTTTTGTAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SPVYTTLECTLRQVTEGSQPSRA*MHPFVK Trigger: CTTTACAAAAGGATGCATCCAGGCTCTGGAAGGCTG...ACTACCTTCAGTTACTTGCCGAAGTGTACATTCTAGTGTGGTGTATACTGGTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR TCA 90 bp | GAGTTTGGCAGGTCAAAGAGAAGCTGCACACTTCCTAAAAACACAAGCATTCTTCATCCCGATAGGACTTaGTGTTGCTCTCGAAGAATT | + |
|
Preference number: 4 (lower is better) Translates to: EFGRSKRSCTLPKNTSILHPDRT*CCSRRI Trigger: AATTCTTCGAGAGCAACATCAAGTCCTATCGGGATG...AAGAATGCTTGTGTTTTTAGGAAGTGTGCAGCTTCTCTTTGACCTGCCAAACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR CCA 90 bp | AAAGATATATTCCATAAAAGAGTTTGGCAGGTCAAAGAGAAGCTGCACACTTCCTCTCTCACCCAGTCTTaGAATAAAAAGGCCAACACG | + |
|
Preference number: 4 (lower is better) Translates to: KDIFHKRVWQVKEKLHTSSLTQS*NKKANT Trigger: CGTGTTGGCCTTTTTATTCCAAGACTGGGTGAGAGA...GGAAGTGTGCAGCTTCTCTTTGACCTGCCAAACTCTTTTATGGAATATATCTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS GCA 90 bp | ATCACCACGCCCACCATCAAGACCAGCACGACGGGGTCGATTCCATaGAACCGGGTCACCTTGGTGAGGTCGGACAGCACACCCTTTTCG | + |
|
Preference number: 5 (lower is better) Translates to: ITTPTIKTSTTGSIP*NRVTLVRSDSTPFS Trigger: CGAAAAGGGTGTGCTGTCCGACCTCACCAAGGTGACCCGGTTGCATGGAATCGACCCCGTCGTGCTGGTCTTGATGGTGGGCGTGGTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
||
| CDS-3UTR CAA 90 bp | GCAAACCCCTGGCATGTTTGCACCACCACGAACCCTGTTGGCACGAGGGTACCATGCAACCGGGTCACCTaGGTGAGGTCGGACAGCACA | + |
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Preference number: 5 (lower is better) Translates to: ANPWHVCTTTNPVGTRVPCNRVT*VRSDST Trigger: TGTGCTGTCCGACCTCACCAAGGTGACCCGGTTGCA...TGGTACCCTCGTGCCAACAGGGTTCGTGGTGGTGCAAACATGCCAGGGGTTTGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| CDS-3UTR CAA 90 bp | CAGATGCTCTTGGGCTCCATAAGGGCCATCAAGCCTTTCCTGCAGCCATGGGAGTGCAACCGGGTCACCTaGGTGAGGTCGGACAGCACA | + |
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Preference number: 5 (lower is better) Translates to: QMLLGSIRAIKPFLQPWECNRVT*VRSDST Trigger: TGTGCTGTCCGACCTCACCAAGGTGACCCGGTTGCA...CTCCCATGGCTGCAGGAAAGGCTTGATGGCCCTTATGGAGCCCAAGAGCATCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| CDS-3UTR CAA 90 bp | CTGGGCAAGCCCTTTTCAGAGATGCCATGTCAAGTGTGGGCAGATGAGAAGGGGCTGAAGAGCAGGTACTaGTACCAGCAGCTGACCTCG | + |
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Preference number: 5 (lower is better) Translates to: LGKPFSEMPCQVWADEKGLKSRY*YQQLTS Trigger: CGAGGTCAGCTGCTGGTACAAGTACCTGCTCTTCAG...CCCCTTCTCATCTGCCCACACTTGACATGGCATCTCTGAAAAGGGCTTGCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| CDS CCA 90 bp | ATGTTGCTCTCGAAGAATTCCCGGAACCGGTCTCTCACCCAGTCTTaGAATAAAAAGGCCAACACGGCCACGGCCAGTTCCAGGAAGAAG | + |
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Preference number: 5 (lower is better) Translates to: MLLSKNSRNRSLTQS*NKKANTATASSRKK Trigger: CTTCTTCCTGGAACTGGCCGTGGCCGTGTTGGCCTTTTTATTCCAAGACTGGGTGAGAGACCGGTTCCGGGAATTCTTCGAGAGCAACAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| CDS-3UTR CAA 90 bp | CTGGGTAAGGCTGCTGAGAAAAGAATGCCAGACGGAAGAGGCTATGAAGATATGCTGAAGAGCAGGTACTaGTACCAGCAGCTGACCTCG | + |
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Preference number: 5 (lower is better) Translates to: LGKAAEKRMPDGRGYEDMLKSRY*YQQLTS Trigger: CGAGGTCAGCTGCTGGTACAAGTACCTGCTCTTCAG...CATATCTTCATAGCCTCTTCCGTCTGGCATTCTTTTCTCAGCAGCCTTACCCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| CDS-3UTR CAA 90 bp | CTGGGTAAGGCTGCTGAGAAAAGAATGCCAGACGGAAGAGGCTATGAAGATATGTGTGTTCACGACTTTTaGTGCAGGATCTGGCACACA | + |
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Preference number: 5 (lower is better) Translates to: LGKAAEKRMPDGRGYEDMCVHDF*CRIWHT Trigger: TGTGTGCCAGATCCTGCACAAAAAGTCGTGAACACA...CATATCTTCATAGCCTCTTCCGTCTGGCATTCTTTTCTCAGCAGCCTTACCCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| CDS-3UTR CAA 90 bp | TCACCAGTATACACCACACTAGAATGTACACTTCGGCAAGTAACTGAAGGTAGTGCCCCACAGAAAAACTaGAGCAGGCAGATGTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SPVYTTLECTLRQVTEGSAPQKN*SRQMFS Trigger: AGAGAACATCTGCCTGCTCAAGTTTTTCTGTGGGGC...ACTACCTTCAGTTACTTGCCGAAGTGTACATTCTAGTGTGGTGTATACTGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| CDS-3UTR CAA 90 bp | GAGTTTGGCAGGTCAAAGAGAAGCTGCACACTTCCTAAAAACACAAGCATTCTTTGTGTTCACGACTTTTaGTGCAGGATCTGGCACACA | + |
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Preference number: 5 (lower is better) Translates to: EFGRSKRSCTLPKNTSILCVHDF*CRIWHT Trigger: TGTGTGCCAGATCCTGCACAAAAAGTCGTGAACACA...AAGAATGCTTGTGTTTTTAGGAAGTGTGCAGCTTCTCTTTGACCTGCCAAACTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| CDS TCA 72 bp | CGACGGGGTCGATTCCATGCAACCGGGTCACCTTGGTaGGGTCGGACAGCACACCCTTTTCGCTCCATGCCC | + |
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Preference number: 6 (lower is better) Translates to: RRGRFHATGSPW*GRTAHPFRSMP Trigger: GGGCATGGAGCGAAAAGGGTGTGCTGTCCGACCTCACCAAGGTGACCCGGTTGCATGGAATCGACCCCGTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| CDS TCA 72 bp | CTCGGAGGGCCCCGACACAGCCTGCGAATCCCAGTGTaGACATCACCACGCCCACCATCAAGACCAGCACGA | + |
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Preference number: 6 (lower is better) Translates to: LGGPRHSLRIPV*TSPRPPSRPAR Trigger: TCGTGCTGGTCTTGATGGTGGGCGTGGTGATGTTCACACTGGGATTCGCAGGCTGTGTCGGGGCCCTCCGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| CDS GCA 72 bp | CCCACCATCAAGACCAGCACGACGGGGTCGATTCCATaGAACCGGGTCACCTTGGTGAGGTCGGACAGCACA | + |
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Preference number: 6 (lower is better) Translates to: PTIKTSTTGSIP*NRVTLVRSDST Trigger: TGTGCTGTCCGACCTCACCAAGGTGACCCGGTTGCATGGAATCGACCCCGTCGTGCTGGTCTTGATGGTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| CDS CAA 90 bp | ATCAAGACCAGCACGACGGGGTCGATTCCATGCAACCGGGTCACCTaGGTGAGGTCGGACAGCACACCCTTTTCGCTCCATGCCCACAGC | + |
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Preference number: 6 (lower is better) Translates to: IKTSTTGSIPCNRVT*VRSDSTPFSLHAHS Trigger: GCTGTGGGCATGGAGCGAAAAGGGTGTGCTGTCCGACCTCACCAAGGTGACCCGGTTGCATGGAATCGACCCCGTCGTGCTGGTCTTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| CDS CAA 72 bp | AGCACGACGGGGTCGATTCCATGCAACCGGGTCACCTaGGTGAGGTCGGACAGCACACCCTTTTCGCTCCAT | + |
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Preference number: 6 (lower is better) Translates to: STTGSIPCNRVT*VRSDSTPFSLH Trigger: ATGGAGCGAAAAGGGTGTGCTGTCCGACCTCACCAAGGTGACCCGGTTGCATGGAATCGACCCCGTCGTGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| CDS GCA 72 bp | GAGATCAGGGTCCTCGCCAGGAAGATGCCAAAAATCTaGAGCAGTGAGATGGCAATGAAGACACCAGCCACA | + |
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Preference number: 6 (lower is better) Translates to: EIRVLARKMPKI*SSEMAMKTPAT Trigger: TGTGGCTGGTGTCTTCATTGCCATCTCACTGCTGCAGATTTTTGGCATCTTCCTGGCGAGGACCCTGATCTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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| CDS TCA 72 bp | GGAAGATGCCAAAAATCTGCAGCAGTGAGATGGCAATaGAGACACCAGCCACAATGTAGATGTTCCTGGGCA | + |
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Preference number: 6 (lower is better) Translates to: GRCQKSAAVRWQ*RHQPQCRCSWA Trigger: TGCCCAGGAACATCTACATTGTGGCTGGTGTCTTCATTGCCATCTCACTGCTGCAGATTTTTGGCATCTTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000047652.6 ENSMUST00000224209.2 |
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