Pregenerated sensors for TSPAN11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000030351Ensembl transcript IDs: ENSMUST00000032501.6
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GAGTCCACAGCCCCAGCGATGACTTTGCAGGCCTGGTTCAGGAAGTaGAGATGTGGTCCCTTGGGTGGGCCAGTCAGCAGGGTACATGGG | + |
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Preference number: 1 (lower is better) Translates to: ESTAPAMTLQAWFRK*RCGPLGGPVSRVHG Trigger: CCCATGTACCCTGCTGACTGGCCCACCCAAGGGACCACATCTCCACTTCCTGAACCAGGCCTGCAAAGTCATCGCTGGGGCTGTGGACTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CCA 90 bp | ATAGGGTGGAGCGAGTCCACAGCCCCAGCGATGACTTTGCAGGCCTaGTTCAGGAAGTGGAGATGTGGTCCCTTGGGTGGGCCAGTCAGC | + |
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Preference number: 1 (lower is better) Translates to: IGWSESTAPAMTLQA*FRKWRCGPLGGPVS Trigger: GCTGACTGGCCCACCCAAGGGACCACATCTCCACTTCCTGAACCAGGCCTGCAAAGTCATCGCTGGGGCTGTGGACTCGCTCCACCCTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR TCA 90 bp | CGAGTAGCCCCTGGAGAACGCCAGTGTGTAGGAGGCTGTCTGACCTaGGAGCCTGATGTTCCCTCTGTGCACACAGCTACTTCCTGCCCT | + |
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Preference number: 1 (lower is better) Translates to: RVAPGERQCVGGCLT*EPDVPSVHTATSCP Trigger: AGGGCAGGAAGTAGCTGTGTGCACAGAGGGAACATCAGGCTCTCAGGTCAGACAGCCTCCTACACACTGGCGTTCTCCAGGGGCTACTCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CCA 90 bp | GCACAGGAACCACAACCACAGACATTTGGTGGCCTCTGCATAGGGTaGAGCGAGTCCACAGCCCCAGCGATGACTTTGCAGGCCTGGTTC | + |
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Preference number: 1 (lower is better) Translates to: AQEPQPQTFGGLCIG*SESTAPAMTLQAWF Trigger: GAACCAGGCCTGCAAAGTCATCGCTGGGGCTGTGGACTCGCTCCACCCTATGCAGAGGCCACCAAATGTCTGTGGTTGTGGTTCCTGTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CCA 90 bp | GTGCTGGTTTTCCCAAAGGAGAGCCAGCCTGGGGCCACATGCCAGTaGGAATCACACGCCAAGCCCTATAGGACTCTCAGAGGGACCATC | + |
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Preference number: 1 (lower is better) Translates to: VLVFPKESQPGATCQ*ESHAKPYRTLRGTI Trigger: GATGGTCCCTCTGAGAGTCCTATAGGGCTTGGCGTGTGATTCCCACTGGCATGTGGCCCCAGGCTGGCTCTCCTTTGGGAAAACCAGCAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CCA 90 bp | CCGTCGAGAAGCACGTACACAGCTGGTTGCCAACCACTCTGTGGCTaGCTTCATCCCACCCTCTCTGTGGACCCAGGGGGAATCATCTCA | + |
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Preference number: 1 (lower is better) Translates to: PSRSTYTAGCQPLCG*LHPTLSVDPGGIIS Trigger: TGAGATGATTCCCCCTGGGTCCACAGAGAGGGTGGGATGAAGCCAGCCACAGAGTGGTTGGCAACCAGCTGTGTACGTGCTTCTCGACGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CCA 90 bp | TGCACCGTCGAGAAGCACGTACACAGCTGGTTGCCAACCACTCTGTaGCTGGCTTCATCCCACCCTCTCTGTGGACCCAGGGGGAATCAT | + |
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Preference number: 1 (lower is better) Translates to: CTVEKHVHSWLPTTL*LASSHPLCGPRGNH Trigger: ATGATTCCCCCTGGGTCCACAGAGAGGGTGGGATGAAGCCAGCCACAGAGTGGTTGGCAACCAGCTGTGTACGTGCTTCTCGACGGTGCA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR GCA 90 bp | CTTCATCCCACCCTCTCTGTGGACCCAGGGGGAATCATCTCAGGTTaGTCCATATGTGACTCAGGCCAGGTGGCCTGCATGACTTTGGGC | + |
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Preference number: 1 (lower is better) Translates to: LHPTLSVDPGGIISG*SICDSGQVACMTLG Trigger: GCCCAAAGTCATGCAGGCCACCTGGCCTGAGTCACATATGGAGCAACCTGAGATGATTCCCCCTGGGTCCACAGAGAGGGTGGGATGAAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR GCA 90 bp | AGGTGTGTTGAGCATGCACCGTCGAGAAGCACGTACACAGCTGGTTaGCAACCACTCTGTGGCTGGCTTCATCCCACCCTCTCTGTGGAC | + |
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Preference number: 1 (lower is better) Translates to: RCVEHAPSRSTYTAG*QPLCGWLHPTLSVD Trigger: GTCCACAGAGAGGGTGGGATGAAGCCAGCCACAGAGTGGTTGGCAACCAGCTGTGTACGTGCTTCTCGACGGTGCATGCTCAACACACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR TCA 90 bp | GGCATAAGAGCCACTTGGCAGCCACAAAGCTGGCTGCTTTTCTCCTaGACAACTTCAGCCGCCCTCCCTTCTCTTGCCTCTTTGCCCCTA | + |
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Preference number: 1 (lower is better) Translates to: GIRATWQPQSWLLFS*TTSAALPSLASLPL Trigger: TAGGGGCAAAGAGGCAAGAGAAGGGAGGGCGGCTGAAGTTGTTCAGGAGAAAAGCAGCCAGCTTTGTGGCTGCCAAGTGGCTCTTATGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CCA 90 bp | GCCGGCATCTACTCCAGCACAGTGGACAAGGAAGTGGAGAATGCATaGAAGAGAAACAGTGAGGTCACAAGGGCACCAGGAGATGGGGTG | + |
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Preference number: 1 (lower is better) Translates to: AGIYSSTVDKEVENA*KRNSEVTRAPGDGV Trigger: CACCCCATCTCCTGGTGCCCTTGTGACCTCACTGTTTCTCTTCCATGCATTCTCCACTTCCTTGTCCACTGTGCTGGAGTAGATGCCGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CCA 90 bp | GCGAAGGAAGGGCCGGCATCTACTCCAGCACAGTGGACAAGGAAGTaGAGAATGCATGGAAGAGAAACAGTGAGGTCACAAGGGCACCAG | + |
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Preference number: 1 (lower is better) Translates to: AKEGPASTPAQWTRK*RMHGRETVRSQGHQ Trigger: CTGGTGCCCTTGTGACCTCACTGTTTCTCTTCCATGCATTCTCCACTTCCTTGTCCACTGTGCTGGAGTAGATGCCGGCCCTTCCTTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CCA 90 bp | TTGGGGACACCTCACTACAGACTTGGCTCCAGCCTTCGAAGCTGCTaGAACGAACCTGGCCTACTATGTGCTTCATGTCCTCTCACCCCA | + |
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Preference number: 1 (lower is better) Translates to: LGTPHYRLGSSLRSC*NEPGLLCASCPLTP Trigger: TGGGGTGAGAGGACATGAAGCACATAGTAGGCCAGGTTCGTTCCAGCAGCTTCGAAGGCTGGAGCCAAGTCTGTAGTGAGGTGTCCCCAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR TCA 90 bp | CAGCACAGTGGACAAGGAAGTGGAGAATGCATGGAAGAGAAACAGTaGGGTCACAAGGGCACCAGGAGATGGGGTGCAGGCAGAGTTCCT | + |
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Preference number: 1 (lower is better) Translates to: QHSGQGSGECMEEKQ*GHKGTRRWGAGRVP Trigger: AGGAACTCTGCCTGCACCCCATCTCCTGGTGCCCTTGTGACCTCACTGTTTCTCTTCCATGCATTCTCCACTTCCTTGTCCACTGTGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR TCA 90 bp | CAGGGCCCCGTCCCTGAGTGGGAAATAGGTAGAAATACTCTGGCATaGAACTGTTGGGGACACCTCACTACAGACTTGGCTCCAGCCTTC | + |
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Preference number: 1 (lower is better) Translates to: QGPVPEWEIGRNTLA*NCWGHLTTDLAPAF Trigger: GAAGGCTGGAGCCAAGTCTGTAGTGAGGTGTCCCCAACAGTTTCATGCCAGAGTATTTCTACCTATTTCCCACTCAGGGACGGGGCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR TCA 90 bp | AAGGTAGTCACATTTGGGGCTGTCTGCTCACTCTGTGGCTCTGACTaGGTGGATGCCTCATGCTCTCCTGGACTACCTCTGCATCAAGTC | + |
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Preference number: 1 (lower is better) Translates to: KVVTFGAVCSLCGSD*VDASCSPGLPLHQV Trigger: GACTTGATGCAGAGGTAGTCCAGGAGAGCATGAGGCATCCACTCAGTCAGAGCCACAGAGTGAGCAGACAGCCCCAAATGTGACTACCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CCA 90 bp | TCACTACAGACTTGGCTCCAGCCTTCGAAGCTGCTGGAACGAACCTaGCCTACTATGTGCTTCATGTCCTCTCACCCCATCTTGTCACCA | + |
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Preference number: 1 (lower is better) Translates to: SLQTWLQPSKLLERT*PTMCFMSSHPILSP Trigger: TGGTGACAAGATGGGGTGAGAGGACATGAAGCACATAGTAGGCCAGGTTCGTTCCAGCAGCTTCGAAGGCTGGAGCCAAGTCTGTAGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CCA 90 bp | AAGTTTCACAGGTGTGTAAGCAGTAGGGGAAGGATGACAGAGGCATaGCATCCAGCTGGACATGCTAGAGTGACCAGGAGGCAGCAAAGC | + |
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Preference number: 1 (lower is better) Translates to: KFHRCVSSRGRMTEA*HPAGHARVTRRQQS Trigger: GCTTTGCTGCCTCCTGGTCACTCTAGCATGTCCAGCTGGATGCCATGCCTCTGTCATCCTTCCCCTACTGCTTACACACCTGTGAAACTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR TCA 90 bp | ATTTTGGAAGTCAAGCCTGGGAACAGGACCAGAGGCTGGGGATTGTaGCCATCGTGTGACTTTCCTAGGTGTTGTGACCAACCTGCTTCC | + |
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Preference number: 1 (lower is better) Translates to: ILEVKPGNRTRGWGL*PSCDFPRCCDQPAS Trigger: GGAAGCAGGTTGGTCACAACACCTAGGAAAGTCACACGATGGTCACAATCCCCAGCCTCTGGTCCTGTTCCCAGGCTTGACTTCCAAAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CCA 90 bp | CTAAAGAGAGGAGCGAAGGAAGGGCCGGCATCTACTCCAGCACAGTaGACAAGGAAGTGGAGAATGCATGGAAGAGAAACAGTGAGGTCA | + |
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Preference number: 1 (lower is better) Translates to: LKRGAKEGPASTPAQ*TRKWRMHGRETVRS Trigger: TGACCTCACTGTTTCTCTTCCATGCATTCTCCACTTCCTTGTCCACTGTGCTGGAGTAGATGCCGGCCCTTCCTTCGCTCCTCTCTTTAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CCA 90 bp | CTCATGCTCTCCTGGACTACCTCTGCATCAAGTCTGTACCAACAGTaGCTGCTTATCACCTCTGACCTCATCTCCCTGATGAGCCTACCA | + |
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Preference number: 1 (lower is better) Translates to: LMLSWTTSASSLYQQ*LLITSDLISLMSLP Trigger: TGGTAGGCTCATCAGGGAGATGAGGTCAGAGGTGATAAGCAGCCACTGTTGGTACAGACTTGATGCAGAGGTAGTCCAGGAGAGCATGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR TCA 90 bp | CTACTATGTGCTTCATGTCCTCTCACCCCATCTTGTCACCAAGGCTaGTGTATGGTCAAGGTAGTCACATTTGGGGCTGTCTGCTCACTC | + |
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Preference number: 1 (lower is better) Translates to: LLCASCPLTPSCHQG*CMVKVVTFGAVCSL Trigger: GAGTGAGCAGACAGCCCCAAATGTGACTACCTTGACCATACATCAGCCTTGGTGACAAGATGGGGTGAGAGGACATGAAGCACATAGTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR TCA 90 bp | TACCTGGGTGACTCTGAGTGGATACAGTGTGATCCCCACATGGTGTaGCTCCCATCTTTATGGAGAGTGATCTCTAAGACAGTCCCTGTT | + |
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Preference number: 1 (lower is better) Translates to: YLGDSEWIQCDPHMV*LPSLWRVISKTVPV Trigger: AACAGGGACTGTCTTAGAGATCACTCTCCATAAAGATGGGAGTCACACCATGTGGGGATCACACTGTATCCACTCAGAGTCACCCAGGTA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CCA 90 bp | ACTATGAATAGCATAGTGAAGAATATATACATGCCAATGGTGCTATaGGGTGAGGGTGGGGATGCACTGTTGGGGAGGGAAAGGGACGAA | + |
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Preference number: 1 (lower is better) Translates to: TMNSIVKNIYMPMVL*GEGGDALLGRERDE Trigger: TTCGTCCCTTTCCCTCCCCAACAGTGCATCCCCACCCTCACCCCATAGCACCATTGGCATGTATATATTCTTCACTATGCTATTCATAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR CCA 90 bp | GTTCTCACTATCATGGCTCTGAAGGACCCCAGAGTGTGCTCCGGGCCATTCCTACCTCCCTGGCAGCTGTaGCAGCTGGTGCTGGGGAGG | + |
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Preference number: 2 (lower is better) Translates to: VLTIMALKDPRVCSGPFLPPWQL*QLVLGR Trigger: CCTCCCCAGCACCAGCTGCCACAGCTGCCAGGGAGG...TAGGAATGGCCCGGAGCACACTCTGGGGTCCTTCAGAGCCATGATAGTGAGAAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CAA 90 bp | CCGCTCCCTGGGGACTTAGCAGGAATGCCACTTGTTGGCTCTGGGTaGAGCAACCCTGGGAAGGCAGAGTCCTGTTCTGAGGGCTCCTCT | + |
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Preference number: 2 (lower is better) Translates to: PLPGDLAGMPLVGSG*SNPGKAESCSEGSS Trigger: AGAGGAGCCCTCAGAACAGGACTCTGCCTTCCCAGGGTTGCTCAACCCAGAGCCAACAAGTGGCATTCCTGCTAAGTCCCCAGGGAGCGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR GCA 90 bp | GTTCTCACTATCATGGCTCTGAAGGACCCCAGAGTGTGCTCCGGGCCATTCCTAGCTGAGACTGTGGTGTaGCCCCCACCTGGTCGAGGA | + |
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Preference number: 2 (lower is better) Translates to: VLTIMALKDPRVCSGPFLAETVV*PPPGRG Trigger: TCCTCGACCAGGTGGGGGGCACACCACAGTCTCAGC...TAGGAATGGCCCGGAGCACACTCTGGGGTCCTTCAGAGCCATGATAGTGAGAAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR GCA 90 bp | GGGCCCCACCACTTTTCTTCTCCATCCTCCATCTACAAGCTTCGGAACCACAGCGCAAAGGGCTCTGGCTaGCTCTGGCCAGGATCATCC | + |
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Preference number: 2 (lower is better) Translates to: GPHHFSSPSSIYKLRNHSAKGSG*LWPGSS Trigger: GGATGATCCTGGCCAGAGGCAGCCAGAGCCCTTTGC...GCTGTGGTTCCGAAGCTTGTAGATGGAGGATGGAGAAGAAAAGTGGTGGGGCCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR GCA 90 bp | ACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACCTCCCTGGCAGCCACCAGGAGATGGGGTaGAGGCAGAGTTCCTCCTTC | + |
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Preference number: 2 (lower is better) Translates to: TTWPHHVGHSAPEYLPGSHQEMG*RQSSSF Trigger: GAAGGAGGAACTCTGCCTGCACCCCATCTCCTGGTG...GCTGCCAGGGAGGTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR TCA 90 bp | GTTCTCACTATCATGGCTCTGAAGGACCCCAGAGTGTGCTCCGGGCCATTCCTAGGAGGCTGTCTGACCTaGGAGCCTGATGTTCCCTCT | + |
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Preference number: 2 (lower is better) Translates to: VLTIMALKDPRVCSGPFLGGCLT*EPDVPS Trigger: AGAGGGAACATCAGGCTCTCAGGTCAGACAGCCTCC...TAGGAATGGCCCGGAGCACACTCTGGGGTCCTTCAGAGCCATGATAGTGAGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR TCA 90 bp | ACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACCTCCCTGGCAGCCTCACTCTGTGGCTCTaGCTGAGTGGATGCCTCATG | + |
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Preference number: 2 (lower is better) Translates to: TTWPHHVGHSAPEYLPGSLTLWL*LSGCLM Trigger: CATGAGGCATCCACTCAGTCAGAGCCACAGAGTGAG...GCTGCCAGGGAGGTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR GCA 90 bp | GGGAGAACATTACCTGGGCCCCACCACTTTTCTTCTCCATCCTCCATCTACAAGTCCACAGCGTCCCAGTaGCTGGCAAAGGGCTCTGGC | + |
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Preference number: 2 (lower is better) Translates to: GRTLPGPHHFSSPSSIYKSTASQ*LAKGSG Trigger: GCCAGAGCCCTTTGCCAGGCACTGGGACGCTGTGGA...CTTGTAGATGGAGGATGGAGAAGAAAAGTGGTGGGGCCCAGGTAATGTTCTCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR CCA 90 bp | TGCCCAAAGTGCTGGTTTTCCCAAAGGAGAGCCAGCCTGGGGCCACATGCCAGTGCCAGGATCATCCCTTaGCAAGGATTTTGGCAGTGG | + |
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Preference number: 2 (lower is better) Translates to: CPKCWFSQRRASLGPHASARIIP*QGFWQW Trigger: CCACTGCCAAAATCCTTGCCAAGGGATGATCCTGGC...ACTGGCATGTGGCCCCAGGCTGGCTCTCCTTTGGGAAAACCAGCACTTTGGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR CCA 90 bp | TTTGTAGCATGTCTAATAATTCACATTCACGGGCCAGCTAGACCCAGGAGCCCACAGCGTCCCAGTGCCTaGCAAAGGGCTCTGGCTGCC | + |
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Preference number: 2 (lower is better) Translates to: FVACLIIHIHGPARPRSPQRPSA*QRALAA Trigger: GGCAGCCAGAGCCCTTTGCCAGGCACTGGGACGCTG...TGGGCTCCTGGGTCTAGCTGGCCCGTGAATGTGAATTATTAGACATGCTACAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR CCA 90 bp | GTTCTCACTATCATGGCTCTGAAGGACCCCAGAGTGTGCTCCGGGCCATTCCTAGTGGGGATGCACTGTTaGGGAGGGAAAGGGACGAAT | + |
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Preference number: 2 (lower is better) Translates to: VLTIMALKDPRVCSGPFLVGMHC*GGKGTN Trigger: ATTCGTCCCTTTCCCTCCCCAACAGTGCATCCCCAC...TAGGAATGGCCCGGAGCACACTCTGGGGTCCTTCAGAGCCATGATAGTGAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR CCA 90 bp | TTTGTAGCATGTCTAATAATTCACATTCACGGGCCAGCTAGACCCAGGAGCCCAGGCAGCTGTGGCAGCTaGTGCTGGGGAGGAGAGGCA | + |
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Preference number: 2 (lower is better) Translates to: FVACLIIHIHGPARPRSPGSCGS*CWGGEA Trigger: TGCCTCTCCTCCCCAGCACCAGCTGCCACAGCTGCC...TGGGCTCCTGGGTCTAGCTGGCCCGTGAATGTGAATTATTAGACATGCTACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR CCA 90 bp | GTTCTCACTATCATGGCTCTGAAGGACCCCAGAGTGTGCTCCGGGCCATTCCTAAAGGCTGCCACTACTTaGCCACACCACGTAGGACAC | + |
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Preference number: 2 (lower is better) Translates to: VLTIMALKDPRVCSGPFLKAATT*PHHVGH Trigger: GTGTCCTACGTGGTGTGGCCAAGTAGTGGCAGCCTT...TAGGAATGGCCCGGAGCACACTCTGGGGTCCTTCAGAGCCATGATAGTGAGAAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR TCA 90 bp | GTCAAGGCTGCCACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACAGCTACTTCCTGCCCTaGGAGTGGAATTCCACCTGT | + |
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Preference number: 2 (lower is better) Translates to: VKAATTWPHHVGHSAPEYSYFLP*EWNSTC Trigger: ACAGGTGGAATTCCACTCTCAGGGCAGGAAGTAGCT...GTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGTGGCAGCCTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR TCA 90 bp | ACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACCTCCCTGGCAGCTGGAGACACCCCATCTaGTGTCATAGACTAAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: TTWPHHVGHSAPEYLPGSWRHPI*CHRLRS Trigger: GGACCTTAGTCTATGACATCAGATGGGGTGTCTCCA...GCTGCCAGGGAGGTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR CCA 90 bp | GTCAAGGCTGCCACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACACCACAGACATTTGGTaGCCTCTGCATAGGGTGGAG | + |
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Preference number: 2 (lower is better) Translates to: VKAATTWPHHVGHSAPEYTTDIW*PLHRVE Trigger: CTCCACCCTATGCAGAGGCCACCAAATGTCTGTGGT...GTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGTGGCAGCCTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR CCA 90 bp | GGGCCCCACCACTTTTCTTCTCCATCCTCCATCTACAAGCTTCGGAACCACAGCAAGGCTGAGCTAACCTaGTCTGCCCAAAGTGCTGGT | + |
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Preference number: 2 (lower is better) Translates to: GPHHFSSPSSIYKLRNHSKAELT*SAQSAG Trigger: ACCAGCACTTTGGGCAGACCAGGTTAGCTCAGCCTT...GCTGTGGTTCCGAAGCTTGTAGATGGAGGATGGAGAAGAAAAGTGGTGGGGCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR CCA 90 bp | GTCAAGGCTGCCACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACTTTGGAAGTCAAGCCTaGGAACAGGACCAGAGGCTG | + |
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Preference number: 2 (lower is better) Translates to: VKAATTWPHHVGHSAPEYFGSQA*EQDQRL Trigger: CAGCCTCTGGTCCTGTTCCCAGGCTTGACTTCCAAA...GTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGTGGCAGCCTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR CCA 90 bp | ACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACCTCCCTGGCAGCGGCCCCGTCCCTGAGTaGGAAATAGGTAGAAATACT | + |
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Preference number: 2 (lower is better) Translates to: TTWPHHVGHSAPEYLPGSGPVPE*EIGRNT Trigger: AGTATTTCTACCTATTTCCCACTCAGGGACGGGGCC...GCTGCCAGGGAGGTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR TCA 90 bp | GTTCTCACTATCATGGCTCTGAAGGACCCCAGAGTGTGCTCCGGGCCATTCCTAGAAGGTGGAGGAAGCTaGGGTTTTTCTCTGAGCCAT | + |
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Preference number: 2 (lower is better) Translates to: VLTIMALKDPRVCSGPFLEGGGS*GFSLSH Trigger: ATGGCTCAGAGAAAAACCTCAGCTTCCTCCACCTTC...TAGGAATGGCCCGGAGCACACTCTGGGGTCCTTCAGAGCCATGATAGTGAGAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR TCA 90 bp | GTCAAGGCTGCCACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACACCAAAGCAGATGCCTaGGGCCACAGTATTCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: VKAATTWPHHVGHSAPEYTKADA*GHSIPL Trigger: CAAAGGAATACTGTGGCCTCAGGCATCTGCTTTGGT...GTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGTGGCAGCCTTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR TCA 90 bp | GTCAAGGCTGCCACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACTCTCTCTCCAACAATTaGCCCAGATCAGCAGGATCT | + |
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Preference number: 2 (lower is better) Translates to: VKAATTWPHHVGHSAPEYSLSNN*PRSAGS Trigger: AGATCCTGCTGATCTGGGTCAATTGTTGGAGAGAGA...GTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGTGGCAGCCTTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR-3UTR GCA 90 bp | GGGCCCCACCACTTTTCTTCTCCATCCTCCATCTACAAGCTTCGGAACCACAGCTTCCTTAGTGCCCTGTaGTGTTGGCTTCAACAGCTA | + |
|
Preference number: 2 (lower is better) Translates to: GPHHFSSPSSIYKLRNHSFLSAL*CWLQQL Trigger: TAGCTGTTGAAGCCAACAGCACAGGGCACTAAGGAA...GCTGTGGTTCCGAAGCTTGTAGATGGAGGATGGAGAAGAAAAGTGGTGGGGCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR GCA 90 bp | GGGCCCCACCACTTTTCTTCTCCATCCTCCATCTACAAGCTTCGGAACCACAGCCAGTTGGACACTTTTTaGTGCTGCTGCTGGTTCATG | + |
|
Preference number: 2 (lower is better) Translates to: GPHHFSSPSSIYKLRNHSQLDTF*CCCWFM Trigger: CATGAACCAGCAGCAGCAGCAAAAAGTGTCCAACTG...GCTGTGGTTCCGAAGCTTGTAGATGGAGGATGGAGAAGAAAAGTGGTGGGGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CCA 90 bp | ACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACCTCCCTGGCAGCGAAGTGGAGAATGCATaGAAGAGAAACAGTGAGGTC | + |
|
Preference number: 2 (lower is better) Translates to: TTWPHHVGHSAPEYLPGSEVENA*KRNSEV Trigger: GACCTCACTGTTTCTCTTCCATGCATTCTCCACTTC...GCTGCCAGGGAGGTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CAA 90 bp | GAACGAACCTGGCCTACTATGTGCTTCATGTCCTCTCACCCCATCTaGTCACCAAGGCTGATGTATGGTCAAGGTAGTCACATTTGGGGC | + |
|
Preference number: 2 (lower is better) Translates to: ERTWPTMCFMSSHPI*SPRLMYGQGSHIWG Trigger: GCCCCAAATGTGACTACCTTGACCATACATCAGCCTTGGTGACAAGATGGGGTGAGAGGACATGAAGCACATAGTAGGCCAGGTTCGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR TCA 90 bp | AGACCGATAACCTCGGAACAGGGCCCCGTCCCTGAGTGGGAAATAGGTAGAAATCACATGAGTTCTCCTTaGATCTCCTGTGTCATTCCG | + |
|
Preference number: 2 (lower is better) Translates to: RPITSEQGPVPEWEIGRNHMSSP*ISCVIP Trigger: CGGAATGACACAGGAGATTCAAGGAGAACTCATGTG...ATTTCTACCTATTTCCCACTCAGGGACGGGGCCCTGTTCCGAGGTTATCGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CCA 90 bp | AAGGTCTTGGCCAGCTATTCTGTGGAGAGATTGAAAAACCAGCCAGGTTTTGGACAGGAAGTGGAGATGTaGTCCCTTGGGTGGGCCAGT | + |
|
Preference number: 2 (lower is better) Translates to: KVLASYSVERLKNQPGFGQEVEM*SLGWAS Trigger: ACTGGCCCACCCAAGGGACCACATCTCCACTTCCTG...TCCAAAACCTGGCTGGTTTTTCAATCTCTCCACAGAATAGCTGGCCAAGACCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR TCA 90 bp | TATTCAAAACCTTGGAAGCTGTCCAGAGAGGCAGATTCTGAGTTCAAAGTGGCTTCTGACCTGAGAGCCTaGTGTTCCCTCTGTGCACAC | + |
|
Preference number: 2 (lower is better) Translates to: YSKPWKLSREADSEFKVASDLRA*CSLCAH Trigger: GTGTGCACAGAGGGAACATCAGGCTCTCAGGTCAGA...AGCCACTTTGAACTCAGAATCTGCCTCTCTGGACAGCTTCCAAGGTTTTGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CCA 90 bp | TATTCAAAACCTTGGAAGCTGTCCAGAGAGGCAGATTCTGAGTTCAAAGTGGCTGCCTGGTTCAGGAAGTaGAGATGTGGTCCCTTGGGT | + |
|
Preference number: 2 (lower is better) Translates to: YSKPWKLSREADSEFKVAAWFRK*RCGPLG Trigger: ACCCAAGGGACCACATCTCCACTTCCTGAACCAGGC...AGCCACTTTGAACTCAGAATCTGCCTCTCTGGACAGCTTCCAAGGTTTTGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CCA 90 bp | TATTCAAAACCTTGGAAGCTGTCCAGAGAGGCAGATTCTGAGTTCAAAGTGGCTACCAAGTTCAGGGCCTaGCATGGGACCCCAGTATGT | + |
|
Preference number: 2 (lower is better) Translates to: YSKPWKLSREADSEFKVATKFRA*HGTPVC Trigger: ACATACTGGGGTCCCATGCCAGGCCCTGAACTTGGT...AGCCACTTTGAACTCAGAATCTGCCTCTCTGGACAGCTTCCAAGGTTTTGAATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CAA 90 bp | TGCCCCACCTTTGATCACTTCTGCCCTATACCTTACAGGAAGGTCTaGGCCAGCTATTCTGTGGAGAGATTGAAAAACCAGCCAGGTTTT | + |
|
Preference number: 2 (lower is better) Translates to: CPTFDHFCPIPYRKV*ASYSVERLKNQPGF Trigger: AAAACCTGGCTGGTTTTTCAATCTCTCCACAGAATAGCTGGCCAAGACCTTCCTGTAAGGTATAGGGCAGAAGTGATCAAAGGTGGGGCA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR TCA 90 bp | TCCCATAACTGGAGCTTCACTGTAAGTGGCAGGTTAAGGCAACTTCTGTCTTTGGGTGGGCTGTGTTTTTaGGGTGGCCACTTTGAGTTT | + |
|
Preference number: 2 (lower is better) Translates to: SHNWSFTVSGRLRQLLSLGGLCF*GGHFEF Trigger: AAACTCAAAGTGGCCACCTCAAAAACACAGCCCACC...CAAAGACAGAAGTTGCCTTAACCTGCCACTTACAGTGAAGCTCCAGTTATGGGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR GCA 90 bp | TTTGTAGCATGTCTAATAATTCACATTCACGGGCCAGCTAGACCCAGGAGCCCAGACACTTTTTGCTGCTaGTGCTGGTTCATGTCGGAA | + |
|
Preference number: 2 (lower is better) Translates to: FVACLIIHIHGPARPRSPDTFCC*CWFMSE Trigger: TTCCGACATGAACCAGCAGCAGCAGCAAAAAGTGTC...TGGGCTCCTGGGTCTAGCTGGCCCGTGAATGTGAATTATTAGACATGCTACAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR GCA 90 bp | TATTCAAAACCTTGGAAGCTGTCCAGAGAGGCAGATTCTGAGTTCAAAGTGGCTACATTTGGGGCTGTCTaGTCACTCTGTGGCTCTGAC | + |
|
Preference number: 2 (lower is better) Translates to: YSKPWKLSREADSEFKVATFGAV*SLCGSD Trigger: GTCAGAGCCACAGAGTGAGCAGACAGCCCCAAATGT...AGCCACTTTGAACTCAGAATCTGCCTCTCTGGACAGCTTCCAAGGTTTTGAATA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CCA 90 bp | TCCCATAACTGGAGCTTCACTGTAAGTGGCAGGTTAAGGCAACTTCTGTCTTTGACAACCACAGACATTTaGTGGCCTCTGCATAGGGTG | + |
|
Preference number: 2 (lower is better) Translates to: SHNWSFTVSGRLRQLLSLTTTDI*WPLHRV Trigger: CACCCTATGCAGAGGCCACCAAATGTCTGTGGTTGT...CAAAGACAGAAGTTGCCTTAACCTGCCACTTACAGTGAAGCTCCAGTTATGGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CCA 90 bp | GTCAAGGCTGCCACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACTTTGAGTTTAGGGAATaGTGGCTCACTTATATGCTT | + |
|
Preference number: 2 (lower is better) Translates to: VKAATTWPHHVGHSAPEYFEFRE*WLTYML Trigger: AAGCATATAAGTGAGCCACCATTCCCTAAACTCAAA...GTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGTGGCAGCCTTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR TCA 90 bp | TATTCAAAACCTTGGAAGCTGTCCAGAGAGGCAGATTCTGAGTTCAAAGTGGCTTCCAGACTCAGACACTaGGATGGATCAGAGGGAGAT | + |
|
Preference number: 2 (lower is better) Translates to: YSKPWKLSREADSEFKVASRLRH*DGSEGD Trigger: ATCTCCCTCTGATCCATCTCAGTGTCTGAGTCTGGA...AGCCACTTTGAACTCAGAATCTGCCTCTCTGGACAGCTTCCAAGGTTTTGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR TCA 90 bp | TATTCAAAACCTTGGAAGCTGTCCAGAGAGGCAGATTCTGAGTTCAAAGTGGCTTCCTGTGTCATTCCGTaGCTAAAGAGAGGAGCGAAG | + |
|
Preference number: 2 (lower is better) Translates to: YSKPWKLSREADSEFKVASCVIP*LKRGAK Trigger: CTTCGCTCCTCTCTTTAGTCACGGAATGACACAGGA...AGCCACTTTGAACTCAGAATCTGCCTCTCTGGACAGCTTCCAAGGTTTTGAATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR TCA 90 bp | GGGAGAACATTACCTGGGCCCCACCACTTTTCTTCTCCATCCTCCATCTACAAGGTGTCTTTTAACACATaGGTTCTCCTTGAATCTCCT | + |
|
Preference number: 2 (lower is better) Translates to: GRTLPGPHHFSSPSSIYKVSFNT*VLLESP Trigger: AGGAGATTCAAGGAGAACTCATGTGTTAAAAGACAC...CTTGTAGATGGAGGATGGAGAAGAAAAGTGGTGGGGCCCAGGTAATGTTCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR TCA 90 bp | TATTCAAAACCTTGGAAGCTGTCCAGAGAGGCAGATTCTGAGTTCAAAGTGGCTGATTTTGGCAGTGGCTaGGTACTTAGGAATGGAGGA | + |
|
Preference number: 2 (lower is better) Translates to: YSKPWKLSREADSEFKVADFGSG*VLRNGG Trigger: TCCTCCATTCCTAAGTACTCAGCCACTGCCAAAATC...AGCCACTTTGAACTCAGAATCTGCCTCTCTGGACAGCTTCCAAGGTTTTGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR TCA 90 bp | TCCCATAACTGGAGCTTCACTGTAAGTGGCAGGTTAAGGCAACTTCTGTCTTTGATTCTGTGGAGAGATTaGAAAACCAGCCAGGTTTTG | + |
|
Preference number: 2 (lower is better) Translates to: SHNWSFTVSGRLRQLLSLILWRD*KTSQVL Trigger: CAAAACCTGGCTGGTTTTTCAATCTCTCCACAGAAT...CAAAGACAGAAGTTGCCTTAACCTGCCACTTACAGTGAAGCTCCAGTTATGGGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CCA 90 bp | TATTCAAAACCTTGGAAGCTGTCCAGAGAGGCAGATTCTGAGTTCAAAGTGGCTTTAAGCCTGACATTTTaGAAGTCAAGCCTGGGAACA | + |
|
Preference number: 2 (lower is better) Translates to: YSKPWKLSREADSEFKVALSLTF*KSSLGT Trigger: TGTTCCCAGGCTTGACTTCCAAAATGTCAGGCTTAA...AGCCACTTTGAACTCAGAATCTGCCTCTCTGGACAGCTTCCAAGGTTTTGAATA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CCA 90 bp | TATTCAAAACCTTGGAAGCTGTCCAGAGAGGCAGATTCTGAGTTCAAAGTGGCTGAGTTTAGGGAATGGTaGCTCACTTATATGCTTAGA | + |
|
Preference number: 2 (lower is better) Translates to: YSKPWKLSREADSEFKVAEFREW*LTYMLR Trigger: TCTAAGCATATAAGTGAGCCACCATTCCCTAAACTC...AGCCACTTTGAACTCAGAATCTGCCTCTCTGGACAGCTTCCAAGGTTTTGAATA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | GCCCCAGCGATGACTTTGCAGGCCTGGTTCAGGAAGTaGAGATGTGGTCCCTTGGGTGGGCCAGTCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: APAMTLQAWFRK*RCGPLGGPVSR Trigger: CCTGCTGACTGGCCCACCCAAGGGACCACATCTCCACTTCCTGAACCAGGCCTGCAAAGTCATCGCTGGGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | GTAGTCCACAGCGTCCCAGTGCCTGGCAAAGGGCTCTaGCTGCCTCTGGCCAGGATCATCCCTTGGCAAGGA | + |
|
Preference number: 3 (lower is better) Translates to: VVHSVPVPGKGL*LPLARIIPWQG Trigger: TCCTTGCCAAGGGATGATCCTGGCCAGAGGCAGCCAGAGCCCTTTGCCAGGCACTGGGACGCTGTGGACTAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR TCA 72 bp | CTGAAGGACCCCAGAGTGTGCTCCGGGCCATTCCTATaGGCCCTGGCCTTCTTAGCTGCTCCAGAGGACCTG | + |
|
Preference number: 3 (lower is better) Translates to: LKDPRVCSGPFL*ALAFLAAPEDL Trigger: CAGGTCCTCTGGAGCAGCTAAGAAGGCCAGGGCTCATAGGAATGGCCCGGAGCACACTCTGGGGTCCTTCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | AGCGAGTCCACAGCCCCAGCGATGACTTTGCAGGCCTaGTTCAGGAAGTGGAGATGTGGTCCCTTGGGTGGG | + |
|
Preference number: 3 (lower is better) Translates to: SESTAPAMTLQA*FRKWRCGPLGG Trigger: CCCACCCAAGGGACCACATCTCCACTTCCTGAACCAGGCCTGCAAAGTCATCGCTGGGGCTGTGGACTCGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | GCCCAAAGTGCTGGTTTTCCCAAAGGAGAGCCAGCCTaGGGCCACATGCCAGTGGGAATCACACGCCAAGCC | + |
|
Preference number: 3 (lower is better) Translates to: AQSAGFPKGEPA*GHMPVGITRQA Trigger: GGCTTGGCGTGTGATTCCCACTGGCATGTGGCCCCAGGCTGGCTCTCCTTTGGGAAAACCAGCACTTTGGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | AGCACGTACACAGCTGGTTGCCAACCACTCTGTGGCTaGCTTCATCCCACCCTCTCTGTGGACCCAGGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: STYTAGCQPLCG*LHPTLSVDPGG Trigger: TCCCCCTGGGTCCACAGAGAGGGTGGGATGAAGCCAGCCACAGAGTGGTTGGCAACCAGCTGTGTACGTGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR GCA 72 bp | TCCACAGCGTCCCAGTGCCTGGCAAAGGGCTCTGGCTaGCTCTGGCCAGGATCATCCCTTGGCAAGGATTTT | + |
|
Preference number: 3 (lower is better) Translates to: STASQCLAKGSG*LWPGSSLGKDF Trigger: AAAATCCTTGCCAAGGGATGATCCTGGCCAGAGGCAGCCAGAGCCCTTTGCCAGGCACTGGGACGCTGTGGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | ACCGCTCCCTGGGGACTTAGCAGGAATGCCACTTGTTaGCTCTGGGTTGAGCAACCCTGGGAAGGCAGAGTC | + |
|
Preference number: 3 (lower is better) Translates to: TAPWGLSRNATC*LWVEQPWEGRV Trigger: GACTCTGCCTTCCCAGGGTTGCTCAACCCAGAGCCAACAAGTGGCATTCCTGCTAAGTCCCCAGGGAGCGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CAA 90 bp | ACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACCTCCCTGGCAGCGGTGGGGATGCACTGTaGGGGAGGGAAAGGGACGAA | + |
|
Preference number: 3 (lower is better) Translates to: TTWPHHVGHSAPEYLPGSGGDAL*GRERDE Trigger: TTCGTCCCTTTCCCTCCCCAACAGTGCATCCCCACC...GCTGCCAGGGAGGTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | GATGACTTTGCAGGCCTGGTTCAGGAAGTGGAGATGTaGTCCCTTGGGTGGGCCAGTCAGCAGGGTACATGG | + |
|
Preference number: 3 (lower is better) Translates to: DDFAGLVQEVEM*SLGWASQQGTW Trigger: CCATGTACCCTGCTGACTGGCCCACCCAAGGGACCACATCTCCACTTCCTGAACCAGGCCTGCAAAGTCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | TTCCCAAAGGAGAGCCAGCCTGGGGCCACATGCCAGTaGGAATCACACGCCAAGCCCTATAGGACTCTCAGA | + |
|
Preference number: 3 (lower is better) Translates to: FPKESQPGATCQ*ESHAKPYRTLR Trigger: TCTGAGAGTCCTATAGGGCTTGGCGTGTGATTCCCACTGGCATGTGGCCCCAGGCTGGCTCTCCTTTGGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | GAGTGGAATTCCACCTGTGCTGGTGACTGCAACCAGTaGCCCTTAGTCCACCCATGTGTGGGTGGGAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: EWNSTCAGDCNQ*PLVHPCVGGSS Trigger: TGAGCTCCCACCCACACATGGGTGGACTAAGGGCCACTGGTTGCAGTCACCAGCACAGGTGGAATTCCACTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CAA 90 bp | AATGCATGGAAGAGAAACAGTGAGGTCACAAGGGCACCAGGAGATGGGGTGCAGGCCCCAGCGATGACTTaGCAGGCCTGGTTCAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: NAWKRNSEVTRAPGDGVQAPAMT*QAWFRK Trigger: CTTCCTGAACCAGGCCTGCAAAGTCATCGCTGGGGC...CTGCACCCCATCTCCTGGTGCCCTTGTGACCTCACTGTTTCTCTTCCATGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CAA 90 bp | ACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACCTCCCTGGCAGCGGCCAGGATCATCCCTaGGCAAGGATTTTGGCAGTG | + |
|
Preference number: 3 (lower is better) Translates to: TTWPHHVGHSAPEYLPGSGQDHP*ARILAV Trigger: CACTGCCAAAATCCTTGCCAAGGGATGATCCTGGCC...GCTGCCAGGGAGGTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR TCA 72 bp | GCCACTTGGCAGCCACAAAGCTGGCTGCTTTTCTCCTaGACAACTTCAGCCGCCCTCCCTTCTCTTGCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: ATWQPQSWLLFS*TTSAALPSLAS Trigger: AGAGGCAAGAGAAGGGAGGGCGGCTGAAGTTGTTCAGGAGAAAAGCAGCCAGCTTTGTGGCTGCCAAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR GCA 72 bp | CGTCGCATCCTCTCCTCAGCAGCTGAGACTGTGGTGTaGCCCCCACCTGGTCGAGGAGATAGTTTTACATTC | + |
|
Preference number: 3 (lower is better) Translates to: RRILSSAAETVV*PPPGRGDSFTF Trigger: GAATGTAAAACTATCTCCTCGACCAGGTGGGGGGCACACCACAGTCTCAGCTGCTGAGGAGAGGATGCGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | TTGGGGCTGTCTGCTCACTCTGTGGCTCTGACTGAGTaGATGCCTCATGCTCTCCTGGACTACCTCTGCATC | + |
|
Preference number: 3 (lower is better) Translates to: LGLSAHSVALTE*MPHALLDYLCI Trigger: GATGCAGAGGTAGTCCAGGAGAGCATGAGGCATCCACTCAGTCAGAGCCACAGAGTGAGCAGACAGCCCCAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | CCATCCAACCTGGGAGGTGTCAAGGCTGCCACTACTTaGCCACACCACGTAGGACACTCTGCTCCTGAATAC | + |
|
Preference number: 3 (lower is better) Translates to: PSNLGGVKAATT*PHHVGHSAPEY Trigger: GTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGTGGCAGCCTTGACACCTCCCAGGTTGGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CAA 90 bp | GGACATGCTAGAGTGACCAGGAGGCAGCAAAGCCACCCCAAGGCATATAGAAAAAGCGGGGCAGGTGTGTaGAGCATGCACCGTCGAGAA | + |
|
Preference number: 3 (lower is better) Translates to: GHARVTRRQQSHPKAYRKSGAGV*SMHRRE Trigger: TTCTCGACGGTGCATGCTCAACACACCTGCCCCGCT...TTTTCTATATGCCTTGGGGTGGCTTTGCTGCCTCCTGGTCACTCTAGCATGTCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR TCA 72 bp | GGACAAGGAAGTGGAGAATGCATGGAAGAGAAACAGTaGGGTCACAAGGGCACCAGGAGATGGGGTGCAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GQGSGECMEEKQ*GHKGTRRWGAG Trigger: GCCTGCACCCCATCTCCTGGTGCCCTTGTGACCTCACTGTTTCTCTTCCATGCATTCTCCACTTCCTTGTCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR GCA 72 bp | TTTCTCCTGAACAACTTCAGCCGCCCTCCCTTCTCTTaGCTCTTTGCCCCTAGCCTAGTAGAGCCAACAGGC | + |
|
Preference number: 3 (lower is better) Translates to: FLLNNFSRPPFS*LFAPSLVEPTG Trigger: GCCTGTTGGCTCTACTAGGCTAGGGGCAAAGAGGCAAGAGAAGGGAGGGCGGCTGAAGTTGTTCAGGAGAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | CTGCAACCAGTGGCCCTTAGTCCACCCATGTGTGGGTaGGAGCTCATCTCTCTCCAACAATTGACCCAGATC | + |
|
Preference number: 3 (lower is better) Translates to: LQPVALSPPMCG*ELISLQQLTQI Trigger: GATCTGGGTCAATTGTTGGAGAGAGATGAGCTCCCACCCACACATGGGTGGACTAAGGGCCACTGGTTGCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | AGGTGTGTAAGCAGTAGGGGAAGGATGACAGAGGCATaGCATCCAGCTGGACATGCTAGAGTGACCAGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: RCVSSRGRMTEA*HPAGHARVTRR Trigger: CCTCCTGGTCACTCTAGCATGTCCAGCTGGATGCCATGCCTCTGTCATCCTTCCCCTACTGCTTACACACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR TCA 72 bp | GGAGAGGCACCCAGACAAGATTTCTTTAGGTCCACCTaGCTGGGGCCATGGCAACAGCAATCACCACTGATG | + |
|
Preference number: 3 (lower is better) Translates to: GEAPRQDFFRST*LGPWQQQSPLM Trigger: CATCAGTGGTGATTGCTGTTGCCATGGCCCCAGTCAGGTGGACCTAAAGAAATCTTGTCTGGGTGCCTCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR GCA 72 bp | CCTTCGAAGCTGCTGGAACGAACCTGGCCTACTATGTaGTTCATGTCCTCTCACCCCATCTTGTCACCAAGG | + |
|
Preference number: 3 (lower is better) Translates to: PSKLLERTWPTM*FMSSHPILSPR Trigger: CCTTGGTGACAAGATGGGGTGAGAGGACATGAAGCACATAGTAGGCCAGGTTCGTTCCAGCAGCTTCGAAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | GGAGCGAAGGAAGGGCCGGCATCTACTCCAGCACAGTaGACAAGGAAGTGGAGAATGCATGGAAGAGAAACA | + |
|
Preference number: 3 (lower is better) Translates to: GAKEGPASTPAQ*TRKWRMHGRET Trigger: TGTTTCTCTTCCATGCATTCTCCACTTCCTTGTCCACTGTGCTGGAGTAGATGCCGGCCCTTCCTTCGCTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | CCTCACTACAGACTTGGCTCCAGCCTTCGAAGCTGCTaGAACGAACCTGGCCTACTATGTGCTTCATGTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PHYRLGSSLRSC*NEPGLLCASCP Trigger: AGGACATGAAGCACATAGTAGGCCAGGTTCGTTCCAGCAGCTTCGAAGGCTGGAGCCAAGTCTGTAGTGAGG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CAA 90 bp | AAGGTCTTGGCCAGCTATTCTGTGGAGAGATTGAAAAACCAGCCAGGTTTTGGATGGAGATGTGGTCCCTaGGGTGGGCCAGTCAGCAGG | + |
|
Preference number: 3 (lower is better) Translates to: KVLASYSVERLKNQPGFGWRCGP*GGPVSR Trigger: CCTGCTGACTGGCCCACCCAAGGGACCACATCTCCA...TCCAAAACCTGGCTGGTTTTTCAATCTCTCCACAGAATAGCTGGCCAAGACCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR TCA 72 bp | CCACCTGACTGGGGCCATGGCAACAGCAATCACCACTaGTGTCCAGCTTGTCCAAGCCTTAGTTTCTTCATC | + |
|
Preference number: 3 (lower is better) Translates to: PPDWGHGNSNHH*CPACPSLSFFI Trigger: GATGAAGAAACTAAGGCTTGGACAAGCTGGACATCAGTGGTGATTGCTGTTGCCATGGCCCCAGTCAGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR TCA 72 bp | TCTCTAAGACAGTCCCTGTTCTCACTATCATGGCTCTaGAGGACCCCAGAGTGTGCTCCGGGCCATTCCTAT | + |
|
Preference number: 3 (lower is better) Translates to: SLRQSLFSLSWL*RTPECAPGHSY Trigger: ATAGGAATGGCCCGGAGCACACTCTGGGGTCCTTCAGAGCCATGATAGTGAGAACAGGGACTGTCTTAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR GCA 72 bp | TCTACAAGCTTCGGAACCACAGCCAGTCTGAGTATCTaGGTGAATCCTGGGAAGGTGGAGGAAGCTGAGGTT | + |
|
Preference number: 3 (lower is better) Translates to: STSFGTTASLSI*VNPGKVEEAEV Trigger: AACCTCAGCTTCCTCCACCTTCCCAGGATTCACGCAGATACTCAGACTGGCTGTGGTTCCGAAGCTTGTAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR GCA 72 bp | ACACCTCACTACAGACTTGGCTCCAGCCTTCGAAGCTaGTGGAACGAACCTGGCCTACTATGTGCTTCATGT | + |
|
Preference number: 3 (lower is better) Translates to: TPHYRLGSSLRS*WNEPGLLCASC Trigger: ACATGAAGCACATAGTAGGCCAGGTTCGTTCCAGCAGCTTCGAAGGCTGGAGCCAAGTCTGTAGTGAGGTGT 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CAA 90 bp | TTTGTAGCATGTCTAATAATTCACATTCACGGGCCAGCTAGACCCAGGAGCCCACTTGTTGGCTCTGGGTaGAGCAACCCTGGGAAGGCA | + |
|
Preference number: 3 (lower is better) Translates to: FVACLIIHIHGPARPRSPLVGSG*SNPGKA Trigger: TGCCTTCCCAGGGTTGCTCAACCCAGAGCCAACAAG...TGGGCTCCTGGGTCTAGCTGGCCCGTGAATGTGAATTATTAGACATGCTACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CAA 90 bp | TTAAGCCTGACATTTTGGAAGTCAAGCCTGGGAACAGGACCAGAGGCTGGGGATCCCTTGGCAAGGATTTaGGCAGTGGCTGAGTACTTA | + |
|
Preference number: 3 (lower is better) Translates to: LSLTFWKSSLGTGPEAGDPLARI*AVAEYL Trigger: TAAGTACTCAGCCACTGCCAAAATCCTTGCCAAGGG...ATCCCCAGCCTCTGGTCCTGTTCCCAGGCTTGACTTCCAAAATGTCAGGCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CAA 90 bp | GGGCCCCACCACTTTTCTTCTCCATCCTCCATCTACAAGCTTCGGAACCACAGCTTTAAGCCTGACATTTaGGAAGTCAAGCCTGGGAAC | + |
|
Preference number: 3 (lower is better) Translates to: GPHHFSSPSSIYKLRNHSFKPDI*EVKPGN Trigger: GTTCCCAGGCTTGACTTCCAAAATGTCAGGCTTAAA...GCTGTGGTTCCGAAGCTTGTAGATGGAGGATGGAGAAGAAAAGTGGTGGGGCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR TCA 72 bp | GCTTCATGTCCTCTCACCCCATCTTGTCACCAAGGCTaGTGTATGGTCAAGGTAGTCACATTTGGGGCTGTC | + |
|
Preference number: 3 (lower is better) Translates to: ASCPLTPSCHQG*CMVKVVTFGAV Trigger: GACAGCCCCAAATGTGACTACCTTGACCATACATCAGCCTTGGTGACAAGATGGGGTGAGAGGACATGAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR GCA 72 bp | CTACCAAAGCAGATGCCTGAGGCCACAGTATTCCTTTaGACACTATCACCTCCCTCAGTGCCTTTTTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: LPKQMPEATVFL*TLSPPSVPFWG Trigger: TCCCCAAAAAGGCACTGAGGGAGGTGATAGTGTGCAAAGGAATACTGTGGCCTCAGGCATCTGCTTTGGTAG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR GCA 72 bp | ACTGAGTGGATGCCTCATGCTCTCCTGGACTACCTCTaGATCAAGTCTGTACCAACAGTGGCTGCTTATCAC | + |
|
Preference number: 3 (lower is better) Translates to: TEWMPHALLDYL*IKSVPTVAAYH Trigger: GTGATAAGCAGCCACTGTTGGTACAGACTTGATGCAGAGGTAGTCCAGGAGAGCATGAGGCATCCACTCAGT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | TCCTGGACTACCTCTGCATCAAGTCTGTACCAACAGTaGCTGCTTATCACCTCTGACCTCATCTCCCTGATG | + |
|
Preference number: 3 (lower is better) Translates to: SWTTSASSLYQQ*LLITSDLISLM Trigger: CATCAGGGAGATGAGGTCAGAGGTGATAAGCAGCCACTGTTGGTACAGACTTGATGCAGAGGTAGTCCAGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | GAAATGAGACAGGTGTCTGCTTTAACAGAAAGCTGTTaGGATCGGCCATGCAGGATGCTCCCATCCAACCTG | + |
|
Preference number: 3 (lower is better) Translates to: EMRQVSALTESC*DRPCRMLPSNL Trigger: CAGGTTGGATGGGAGCATCCTGCATGGCCGATCCCAACAGCTTTCTGTTAAAGCAGACACCTGTCTCATTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | GCATGCACCCATCAGGAGAGAGGCACATCCCATAACTaGAGCTTCACTGTAAGTGGCAGGTTAAGGCAACTT | + |
|
Preference number: 3 (lower is better) Translates to: ACTHQERGTSHN*SFTVSGRLRQL Trigger: AAGTTGCCTTAACCTGCCACTTACAGTGAAGCTCCAGTTATGGGATGTGCCTCTCTCCTGATGGGTGCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CAA 90 bp | AGACCGATAACCTCGGAACAGGGCCCCGTCCCTGAGTGGGAAATAGGTAGAAATACACATGAGTTCTCCTaGAATCTCCTGTGTCATTCC | + |
|
Preference number: 3 (lower is better) Translates to: RPITSEQGPVPEWEIGRNTHEFS*NLLCHS Trigger: GGAATGACACAGGAGATTCAAGGAGAACTCATGTGT...ATTTCTACCTATTTCCCACTCAGGGACGGGGCCCTGTTCCGAGGTTATCGGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CAA 90 bp | TCCCATAACTGGAGCTTCACTGTAAGTGGCAGGTTAAGGCAACTTCTGTCTTTGCACCTCACTACAGACTaGGCTCCAGCCTTCGAAGCT | + |
|
Preference number: 3 (lower is better) Translates to: SHNWSFTVSGRLRQLLSLHLTTD*APAFEA Trigger: AGCTTCGAAGGCTGGAGCCAAGTCTGTAGTGAGGTG...CAAAGACAGAAGTTGCCTTAACCTGCCACTTACAGTGAAGCTCCAGTTATGGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR TCA 72 bp | TTCAAAACCTTGGAAGCTGTCCAGAGAGGCAGATTCTaGGTTCAAAGTGGCTCATCACACTGGCCTGCTGTG | + |
|
Preference number: 3 (lower is better) Translates to: FKTLEAVQRGRF*VQSGSSHWPAV Trigger: CACAGCAGGCCAGTGTGATGAGCCACTTTGAACTCAGAATCTGCCTCTCTGGACAGCTTCCAAGGTTTTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | CCCAAGCAGGGAAGACTGAAGCTAGGAGTGGAGCCCTaGTGTGCAAAGCTGCCTACAGTAATAATAATCACA | + |
|
Preference number: 3 (lower is better) Translates to: PKQGRLKLGVEP*CAKLPTVIIIT Trigger: TGTGATTATTATTACTGTAGGCAGCTTTGCACACCAGGGCTCCACTCCTAGCTTCAGTCTTCCCTGCTTGGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | AGCATAGTGAAGAATATATACATGCCAATGGTGCTATaGGGTGAGGGTGGGGATGCACTGTTGGGGAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: SIVKNIYMPMVL*GEGGDALLGRE Trigger: TTCCCTCCCCAACAGTGCATCCCCACCCTCACCCCATAGCACCATTGGCATGTATATATTCTTCACTATGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | TCCACTCAGAAACAACAAATAATCAGAATAGGAGCTTaGGAGCTGGGCAAGAAGGTAGAGGAGAGCCTGGCC | + |
|
Preference number: 3 (lower is better) Translates to: STQKQQIIRIGA*ELGKKVEESLA Trigger: GGCCAGGCTCTCCTCTACCTTCTTGCCCAGCTCCCAAGCTCCTATTCTGATTATTTGTTGTTTCTGAGTGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CAA 90 bp | GGACATGCTAGAGTGACCAGGAGGCAGCAAAGCCACCCCAAGGCATATAGAAAACATTTATTCAAAACCTaGGAAGCTGTCCAGAGAGGC | + |
|
Preference number: 3 (lower is better) Translates to: GHARVTRRQQSHPKAYRKHLFKT*EAVQRG Trigger: GCCTCTCTGGACAGCTTCCAAGGTTTTGAATAAATG...TTTTCTATATGCCTTGGGGTGGCTTTGCTGCCTCCTGGTCACTCTAGCATGTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR TCA 72 bp | GTCCCTGAGTGGGAAATAGGTAGAAATACTCTGGCATaGAACTGTTGGGGACACCTCACTACAGACTTGGCT | + |
|
Preference number: 3 (lower is better) Translates to: VPEWEIGRNTLA*NCWGHLTTDLA Trigger: AGCCAAGTCTGTAGTGAGGTGTCCCCAACAGTTTCATGCCAGAGTATTTCTACCTATTTCCCACTCAGGGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR GCA 72 bp | ACAGCTACCTTAAGATGCCCCACCTTTGATCACTTCTaGCCTATACCTTACAGGAAGGTCTTGGCCAGCTAT | + |
|
Preference number: 3 (lower is better) Translates to: TATLRCPTFDHF*PIPYRKVLASY Trigger: ATAGCTGGCCAAGACCTTCCTGTAAGGTATAGGGCAGAAGTGATCAAAGGTGGGGCATCTTAAGGTAGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR TCA 72 bp | ATCCCCACATGGTGTGACTCCCATCTTTATGGAGAGTaGTCTCTAAGACAGTCCCTGTTCTCACTATCATGG | + |
|
Preference number: 3 (lower is better) Translates to: IPTWCDSHLYGE*SLRQSLFSLSW Trigger: CCATGATAGTGAGAACAGGGACTGTCTTAGAGATCACTCTCCATAAAGATGGGAGTCACACCATGTGGGGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR TCA 72 bp | GACTCTGAGTGGATACAGTGTGATCCCCACATGGTGTaGCTCCCATCTTTATGGAGAGTGATCTCTAAGACA | + |
|
Preference number: 3 (lower is better) Translates to: DSEWIQCDPHMV*LPSLWRVISKT Trigger: TGTCTTAGAGATCACTCTCCATAAAGATGGGAGTCACACCATGTGGGGATCACACTGTATCCACTCAGAGTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR TCA 72 bp | GGCAAGGGGGCAATTTCAAAGCTGGCAGGTTCTCACTaGTCCATTTATTCAAAACCTTGGAAGCTGTCCAGA | + |
|
Preference number: 3 (lower is better) Translates to: GKGAISKLAGSH*SIYSKPWKLSR Trigger: TCTGGACAGCTTCCAAGGTTTTGAATAAATGGATCAGTGAGAACCTGCCAGCTTTGAAATTGCCCCCTTGCC 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR GCA 72 bp | AGCCAGGTAGACAACCAGTTGGACACTTTTTGCTGCTaGTGCTGGTTCATGTCGGAACTGAGGTTTGTTATT | + |
|
Preference number: 3 (lower is better) Translates to: SQVDNQLDTFCC*CWFMSELRFVI Trigger: AATAACAAACCTCAGTTCCGACATGAACCAGCAGCAGCAGCAAAAAGTGTCCAACTGGTTGTCTACCTGGCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR-3UTR CAA 90 bp | TATTCAAAACCTTGGAAGCTGTCCAGAGAGGCAGATTCTGAGTTCAAAGTGGCTAAAACCAGCCAGGTTTaGGAAAAGGCTGAGCTAACC | + |
|
Preference number: 3 (lower is better) Translates to: YSKPWKLSREADSEFKVAKTSQV*EKAELT Trigger: GGTTAGCTCAGCCTTTTCCAAAACCTGGCTGGTTTT...AGCCACTTTGAACTCAGAATCTGCCTCTCTGGACAGCTTCCAAGGTTTTGAATA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CCA 72 bp | GTAGACAACCAGTTGGACACTTTTTGCTGCTGCTGCTaGTTCATGTCGGAACTGAGGTTTGTTATTGTAGAG | + |
|
Preference number: 3 (lower is better) Translates to: VDNQLDTFCCCC*FMSELRFVIVE Trigger: CTCTACAATAACAAACCTCAGTTCCGACATGAACCAGCAGCAGCAGCAAAAAGTGTCCAACTGGTTGTCTAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| CDS-3UTR TCA 90 bp | GCTGCCTCTGGCCAGGATCATCCCTTGGCAAGGATTTTGGCAGTGGCTGAGTACGGTCCACCGAGGCTGTaGTCTCTGCGGCCCTGGGCT | + |
|
Preference number: 4 (lower is better) Translates to: AASGQDHPLARILAVAEYGPPRL*SLRPWA Trigger: AGCCCAGGGCCGCAGAGATCACAGCCTCGGTGGACC...GTACTCAGCCACTGCCAAAATCCTTGCCAAGGGATGATCCTGGCCAGAGGCAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| CDS-3UTR TCA 90 bp | GTTCTCACTATCATGGCTCTGAAGGACCCCAGAGTGTGCTCCGGGCCATTCCTAGAGGGGTGGGCTCGCTaGCCACAGCGGGCCACCACT | + |
|
Preference number: 4 (lower is better) Translates to: VLTIMALKDPRVCSGPFLEGWAR*PQRATT Trigger: AGTGGTGGCCCGCTGTGGTCAGCGAGCCCACCCCTC...TAGGAATGGCCCGGAGCACACTCTGGGGTCCTTCAGAGCCATGATAGTGAGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| CDS-3UTR TCA 90 bp | GCTGCCTCTGGCCAGGATCATCCCTTGGCAAGGATTTTGGCAGTGGCTGAGTACTACCCACCGCTCCCATaGGCAGCAGGTGGTCAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: AASGQDHPLARILAVAEYYPPLP*AAGGQP Trigger: TGGCTGACCACCTGCTGCTCATGGGAGCGGTGGGTA...GTACTCAGCCACTGCCAAAATCCTTGCCAAGGGATGATCCTGGCCAGAGGCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| CDS-3UTR GCA 90 bp | AGCCCCAGCGATGACTTTGCAGGCCTGGTTCAGGAAGTGGAGATGTGGTCCCTTCGAGGCTGTGATCTCTaGGGCCCTGGGCTGTCCGTA | + |
|
Preference number: 4 (lower is better) Translates to: SPSDDFAGLVQEVEMWSLRGCDL*GPGLSV Trigger: TACGGACAGCCCAGGGCCGCAGAGATCACAGCCTCG...AAGGGACCACATCTCCACTTCCTGAACCAGGCCTGCAAAGTCATCGCTGGGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CAA 72 bp | TTGCAGGCCTGGTTCAGGAAGTGGAGATGTGGTCCCTaGGGTGGGCCAGTCAGCAGGGTACATGGGTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LQAWFRKWRCGP*GGPVSRVHGCP Trigger: AGGACACCCATGTACCCTGCTGACTGGCCCACCCAAGGGACCACATCTCCACTTCCTGAACCAGGCCTGCAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| CDS-3UTR GCA 90 bp | ACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACCTCCCTGGCAGCGAGAGGCAGCTCTTCTaGTCCCGGATGATGGCCCCA | + |
|
Preference number: 4 (lower is better) Translates to: TTWPHHVGHSAPEYLPGSERQLF*SRMMAP Trigger: TGGGGCCATCATCCGGGAGCAGAAGAGCTGCCTCTC...GCTGCCAGGGAGGTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| CDS-3UTR GCA 90 bp | TGGTTTTCCCAAAGGAGAGCCAGCCTGGGGCCACATGCCAGTGGGAATCACACGATGTGCCAGGACCCCTaGCACCAGCTCCACAAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: WFSQRRASLGPHASGNHTMCQDP*HQLHKE Trigger: TTCCTTGTGGAGCTGGTGGCAGGGGTCCTGGCACAT...CGTGTGATTCCCACTGGCATGTGGCCCCAGGCTGGCTCTCCTTTGGGAAAACCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| CDS-3UTR GCA 90 bp | TGGTTTTCCCAAAGGAGAGCCAGCCTGGGGCCACATGCCAGTGGGAATCACACGATGTACGCGCTGTGCTaGCAGTCGGCTGAGCTGTTA | + |
|
Preference number: 4 (lower is better) Translates to: WFSQRRASLGPHASGNHTMYALC*QSAELL Trigger: TAACAGCTCAGCCGACTGGCAGCACAGCGCGTACAT...CGTGTGATTCCCACTGGCATGTGGCCCCAGGCTGGCTCTCCTTTGGGAAAACCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| CDS-3UTR TCA 90 bp | AATGCATGGAAGAGAAACAGTGAGGTCACAAGGGCACCAGGAGATGGGGTGCAGGTGCTGCCAGTCGGCTaGGCTGTTACTGCCACAGCA | + |
|
Preference number: 4 (lower is better) Translates to: NAWKRNSEVTRAPGDGVQVLPVG*AVTATA Trigger: TGCTGTGGCAGTAACAGCTCAGCCGACTGGCAGCAC...CTGCACCCCATCTCCTGGTGCCCTTGTGACCTCACTGTTTCTCTTCCATGCATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| CDS-3UTR GCA 90 bp | ACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACCTCCCTGGCAGCAGGGTGCTGTTCAGGTaGCACTTCAGCTCGTCACTC | + |
|
Preference number: 4 (lower is better) Translates to: TTWPHHVGHSAPEYLPGSRVLFR*HFSSSL Trigger: GAGTGACGAGCTGAAGTGGCACCTGAACAGCACCCT...GCTGCCAGGGAGGTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CAA 72 bp | GGGGACTTAGCAGGAATGCCACTTGTTGGCTCTGGGTaGAGCAACCCTGGGAAGGCAGAGTCCTGTTCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: GDLAGMPLVGSG*SNPGKAESCSE Trigger: CTCAGAACAGGACTCTGCCTTCCCAGGGTTGCTCAACCCAGAGCCAACAAGTGGCATTCCTGCTAAGTCCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| CDS-3UTR TCA 90 bp | TTAAGCCTGACATTTTGGAAGTCAAGCCTGGGAACAGGACCAGAGGCTGGGGATTCTTCTGCTCCCGGATaGTGGCCCCAAAGCCCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSLTFWKSSLGTGPEAGDSSAPG*WPQSPG Trigger: TCCTGGGCTTTGGGGCCATCATCCGGGAGCAGAAGA...ATCCCCAGCCTCTGGTCCTGTTCCCAGGCTTGACTTCCAAAATGTCAGGCTTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| CDS-3UTR CCA 90 bp | TGGTTTTCCCAAAGGAGAGCCAGCCTGGGGCCACATGCCAGTGGGAATCACACGGCAGGCAGAAATATGTaGAGAGGCAGCTCTTCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: WFSQRRASLGPHASGNHTAGRNM*RGSSSA Trigger: AGCAGAAGAGCTGCCTCTCCACATATTTCTGCCTGC...CGTGTGATTCCCACTGGCATGTGGCCCCAGGCTGGCTCTCCTTTGGGAAAACCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CAA 72 bp | CCCATGTGTGGGTGGGAGCTCATCTCTCTCCAACAATaGACCCAGATCAGCAGGATCTGGGGTCACCACAGT | + |
|
Preference number: 4 (lower is better) Translates to: PMCGWELISLQQ*TQISRIWGHHS Trigger: ACTGTGGTGACCCCAGATCCTGCTGATCTGGGTCAATTGTTGGAGAGAGATGAGCTCCCACCCACACATGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| CDS-3UTR GCA 90 bp | GGACATGCTAGAGTGACCAGGAGGCAGCAAAGCCACCCCAAGGCATATAGAAAACATTTGAAGTCCTGCTaGAGCCGGTCCACCGAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: GHARVTRRQQSHPKAYRKHLKSC*SRSTEA Trigger: AGCCTCGGTGGACCGGCTGCAGCAGGACTTCAAATG...TTTTCTATATGCCTTGGGGTGGCTTTGCTGCCTCCTGGTCACTCTAGCATGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| CDS-3UTR GCA 90 bp | GGGAGAACATTACCTGGGCCCCACCACTTTTCTTCTCCATCCTCCATCTACAAGAAGATGTACGCGCTGTaGTGCCAGTCGGCTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GRTLPGPHHFSSPSSIYKKMYAL*CQSAEL Trigger: CAGCTCAGCCGACTGGCAGCACAGCGCGTACATCTT...CTTGTAGATGGAGGATGGAGAAGAAAAGTGGTGGGGCCCAGGTAATGTTCTCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| CDS-3UTR CCA 90 bp | GTCAAGGCTGCCACTACTTGGCCACACCACGTAGGACACTCTGCTCCTGAATACCGAACTGTTCCAGCTTaGCCATACAGCCTCCCTCTA | + |
|
Preference number: 4 (lower is better) Translates to: VKAATTWPHHVGHSAPEYRTVPA*PYSLPL Trigger: TAGAGGGAGGCTGTATGGCCAAGCTGGAACAGTTCG...GTATTCAGGAGCAGAGTGTCCTACGTGGTGTGGCCAAGTAGTGGCAGCCTTGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| CDS-3UTR TCA 90 bp | TTAAGCCTGACATTTTGGAAGTCAAGCCTGGGAACAGGACCAGAGGCTGGGGATTACTGCCACAGCATTTaGAGTCCTGCTGCAGCCGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSLTFWKSSLGTGPEAGDYCHSI*SPAAAG Trigger: ACCGGCTGCAGCAGGACTTCAAATGCTGTGGCAGTA...ATCCCCAGCCTCTGGTCCTGTTCCCAGGCTTGACTTCCAAAATGTCAGGCTTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
||
| 3UTR CAA 72 bp | GCTGCCTCTGGCCAGGATCATCCCTTGGCAAGGATTTaGGCAGTGGCTGAGTACTTAGGAATGGAGGAGTTA | + |
|
Preference number: 4 (lower is better) Translates to: AASGQDHPLARI*AVAEYLGMEEL Trigger: TAACTCCTCCATTCCTAAGTACTCAGCCACTGCCAAAATCCTTGCCAAGGGATGATCCTGGCCAGAGGCAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS-3UTR CCA 90 bp | TTTGTAGCATGTCTAATAATTCACATTCACGGGCCAGCTAGACCCAGGAGCCCAAGCAGGTACTTCAGGTaGGCCAGCAGCCAGTCATCC | + |
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Preference number: 4 (lower is better) Translates to: FVACLIIHIHGPARPRSPSRYFR*ASSQSS Trigger: GGATGACTGGCTGCTGGCCCACCTGAAGTACCTGCT...TGGGCTCCTGGGTCTAGCTGGCCCGTGAATGTGAATTATTAGACATGCTACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS-3UTR TCA 90 bp | GGACATGCTAGAGTGACCAGGAGGCAGCAAAGCCACCCCAAGGCATATAGAAAAGGAAGCCAGTTGTCATaGCAAGACCACCAACGAAAA | + |
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Preference number: 4 (lower is better) Translates to: GHARVTRRQQSHPKAYRKGSQLS*QDHQRK Trigger: TTTTCGTTGGTGGTCTTGTCATGACAACTGGCTTCC...TTTTCTATATGCCTTGGGGTGGCTTTGCTGCCTCCTGGTCACTCTAGCATGTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CAA 72 bp | AGAACTGAGCCAGGTAGACAACCAGTTGGACACTTTTaGCTGCTGCTGCTGGTTCATGTCGGAACTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: RTEPGRQPVGHF*LLLLVHVGTEV Trigger: AACCTCAGTTCCGACATGAACCAGCAGCAGCAGCAAAAAGTGTCCAACTGGTTGTCTACCTGGCTCAGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS-3UTR TCA 90 bp | TTTGTAGCATGTCTAATAATTCACATTCACGGGCCAGCTAGACCCAGGAGCCCAACCATCCCACAGATCTaGAGACAGGCTACCCCAATA | + |
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Preference number: 4 (lower is better) Translates to: FVACLIIHIHGPARPRSPTIPQI*RQATPI Trigger: TATTGGGGTAGCCTGTCTTCAGATCTGTGGGATGGT...TGGGCTCCTGGGTCTAGCTGGCCCGTGAATGTGAATTATTAGACATGCTACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CAA 72 bp | CTGGGATTTTGGGGAGTGAGTGTCTTCTTCTTAGTGTaGGTCCTTCAGGTGAATAATATAAGCCAGTCCAGG | + |
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Preference number: 4 (lower is better) Translates to: LGFWGVSVFFLV*VLQVNNISQSR Trigger: CCTGGACTGGCTTATATTATTCACCTGAAGGACCAACACTAAGAAGAAGACACTCACTCCCCAAAATCCCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CAA 72 bp | TTTGATCACTTCTGCCCTATACCTTACAGGAAGGTCTaGGCCAGCTATTCTGTGGAGAGATTGAAAAACCAG | + |
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Preference number: 4 (lower is better) Translates to: FDHFCPIPYRKV*ASYSVERLKNQ Trigger: CTGGTTTTTCAATCTCTCCACAGAATAGCTGGCCAAGACCTTCCTGTAAGGTATAGGGCAGAAGTGATCAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| 3UTR CAA 72 bp | ATTTTCTTTCCGTGTCTTTTAACACATGAGTTCTCCTaGAATCTCCTGTGTCATTCCGTGACTAAAGAGAGG | + |
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Preference number: 4 (lower is better) Translates to: IFFPCLLTHEFS*NLLCHSVTKER Trigger: CCTCTCTTTAGTCACGGAATGACACAGGAGATTCAAGGAGAACTCATGTGTTAAAAGACACGGAAAGAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS GCA 90 bp | GCATTTGAAGTCCTGCTGCAGCCGGTCCACCGAGGCTGTGATCTCTaGGGCCCTGGGCTGTCCGTAGTGCTCAGTCAGGGTGCTGTTCAG | + |
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Preference number: 5 (lower is better) Translates to: AFEVLLQPVHRGCDL*GPGLSVVLSQGAVQ Trigger: CTGAACAGCACCCTGACTGAGCACTACGGACAGCCCAGGGCCGCAGAGATCACAGCCTCGGTGGACCGGCTGCAGCAGGACTTCAAATGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS GCA 90 bp | TGCCAGTCGGCTGAGCTGTTACTGCCACAGCATTTGAAGTCCTGCTaGAGCCGGTCCACCGAGGCTGTGATCTCTGCGGCCCTGGGCTGT | + |
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Preference number: 5 (lower is better) Translates to: CQSAELLLPQHLKSC*SRSTEAVISAALGC Trigger: ACAGCCCAGGGCCGCAGAGATCACAGCCTCGGTGGACCGGCTGCAGCAGGACTTCAAATGCTGTGGCAGTAACAGCTCAGCCGACTGGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS TCA 90 bp | CAGGGCTTCCTGAGACAAGATGTACGCGCTGTGCTGCCAGTCGGCTaGGCTGTTACTGCCACAGCATTTGAAGTCCTGCTGCAGCCGGTC | + |
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Preference number: 5 (lower is better) Translates to: QGFLRQDVRAVLPVG*AVTATAFEVLLQPV Trigger: GACCGGCTGCAGCAGGACTTCAAATGCTGTGGCAGTAACAGCTCAGCCGACTGGCAGCACAGCGCGTACATCTTGTCTCAGGAAGCCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS GCA 90 bp | CAGCTCGTCACTCAGCCTCTGGTAGTACACATGTGCCAGGACCCCTaGCACCAGCTCCACAAGGAAGATGACCAGCAGCAGGCAGAAATA | + |
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Preference number: 5 (lower is better) Translates to: QLVTQPLVVHMCQDP*HQLHKEDDQQQAEI Trigger: TATTTCTGCCTGCTGCTGGTCATCTTCCTTGTGGAGCTGGTGGCAGGGGTCCTGGCACATGTGTACTACCAGAGGCTGAGTGACGAGCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS GCA 90 bp | AAGATGACCAGCAGCAGGCAGAAATATGTGGAGAGGCAGCTCTTCTaGTCCCGGATGATGGCCCCAAAGCCCAGGAAGCCAGTTGTCATG | + |
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Preference number: 5 (lower is better) Translates to: KMTSSRQKYVERQLF*SRMMAPKPRKPVVM Trigger: CATGACAACTGGCTTCCTGGGCTTTGGGGCCATCATCCGGGAGCAGAAGAGCTGCCTCTCCACATATTTCTGCCTGCTGCTGGTCATCTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS-3UTR CAA 90 bp | TTTGTAGCATGTCTAATAATTCACATTCACGGGCCAGCTAGACCCAGGAGCCCAACGAACTGTTCCAGCTaGGCCATACAGCCTCCCTCT | + |
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Preference number: 5 (lower is better) Translates to: FVACLIIHIHGPARPRSPTNCSS*AIQPPS Trigger: AGAGGGAGGCTGTATGGCCAAGCTGGAACAGTTCGT...TGGGCTCCTGGGTCTAGCTGGCCCGTGAATGTGAATTATTAGACATGCTACAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS GCA 72 bp | GTCCTGCTGCAGCCGGTCCACCGAGGCTGTGATCTCTaGGGCCCTGGGCTGTCCGTAGTGCTCAGTCAGGGT | + |
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Preference number: 6 (lower is better) Translates to: VLLQPVHRGCDL*GPGLSVVLSQG Trigger: ACCCTGACTGAGCACTACGGACAGCCCAGGGCCGCAGAGATCACAGCCTCGGTGGACCGGCTGCAGCAGGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS GCA 72 bp | GCTGAGCTGTTACTGCCACAGCATTTGAAGTCCTGCTaGAGCCGGTCCACCGAGGCTGTGATCTCTGCGGCC | + |
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Preference number: 6 (lower is better) Translates to: AELLLPQHLKSC*SRSTEAVISAA Trigger: GGCCGCAGAGATCACAGCCTCGGTGGACCGGCTGCAGCAGGACTTCAAATGCTGTGGCAGTAACAGCTCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS CAA 72 bp | TGCTGCCAGTCGGCTGAGCTGTTACTGCCACAGCATTaGAAGTCCTGCTGCAGCCGGTCCACCGAGGCTGTG | + |
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Preference number: 6 (lower is better) Translates to: CCQSAELLLPQH*KSCCSRSTEAV Trigger: CACAGCCTCGGTGGACCGGCTGCAGCAGGACTTCAAATGCTGTGGCAGTAACAGCTCAGCCGACTGGCAGCA 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS GCA 72 bp | TCGGCTGAGCTGTTACTGCCACAGCATTTGAAGTCCTaGTGCAGCCGGTCCACCGAGGCTGTGATCTCTGCG | + |
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Preference number: 6 (lower is better) Translates to: SAELLLPQHLKS*CSRSTEAVISA Trigger: CGCAGAGATCACAGCCTCGGTGGACCGGCTGCAGCAGGACTTCAAATGCTGTGGCAGTAACAGCTCAGCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS CCA 72 bp | GCTACCCCAATACCCACCGCTCCCATGAGCAGCAGGTaGTCAGCCACGAACTGTTCCAGCTTGGCCATACAG | + |
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Preference number: 6 (lower is better) Translates to: ATPIPTAPMSSR*SATNCSSLAIQ Trigger: CTGTATGGCCAAGCTGGAACAGTTCGTGGCTGACCACCTGCTGCTCATGGGAGCGGTGGGTATTGGGGTAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS GCA 72 bp | ACTCAGCCTCTGGTAGTACACATGTGCCAGGACCCCTaGCACCAGCTCCACAAGGAAGATGACCAGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: TQPLVVHMCQDP*HQLHKEDDQQQ Trigger: CTGCTGCTGGTCATCTTCCTTGTGGAGCTGGTGGCAGGGGTCCTGGCACATGTGTACTACCAGAGGCTGAGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS TCA 72 bp | CTGAGACAAGATGTACGCGCTGTGCTGCCAGTCGGCTaGGCTGTTACTGCCACAGCATTTGAAGTCCTGCTG | + |
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Preference number: 6 (lower is better) Translates to: LRQDVRAVLPVG*AVTATAFEVLL Trigger: CAGCAGGACTTCAAATGCTGTGGCAGTAACAGCTCAGCCGACTGGCAGCACAGCGCGTACATCTTGTCTCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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| CDS GCA 72 bp | CTCCACCAGTGTCCAGATACCCACGGCCATGACGGCTaGCCCACCTACCCAGAAGAAGAAGTTGAAGATGAA | + |
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Preference number: 6 (lower is better) Translates to: LHQCPDTHGHDG*PTYPEEEVEDE Trigger: TTCATCTTCAACTTCTTCTTCTGGGTAGGTGGGGCAGCCGTCATGGCCGTGGGTATCTGGACACTGGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000032501.6 |
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