Pregenerated sensors for TSPAN10 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039691Ensembl transcript IDs: ENSMUST00000044105.9
Found 80 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGTGGGTGAGGCTGGAACCAGAAGACCCCAGCCCTGGCTGCTCCTaGCATGTAGCGGGACACAAGGCAGGTATGTGTGACACAGACTGC | + |
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Preference number: 1 (lower is better) Translates to: RWVRLEPEDPSPGCS*HVAGHKAGMCDTDC Trigger: GCAGTCTGTGTCACACATACCTGCCTTGTGTCCCGCTACATGGCAGGAGCAGCCAGGGCTGGGGTCTTCTGGTTCCAGCCTCACCCACCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| 3UTR GCA 90 bp | CAGGGAAGGTGGGTGAGGCTGGAACCAGAAGACCCCAGCCCTGGCTaGTCCTGCCATGTAGCGGGACACAAGGCAGGTATGTGTGACACA | + |
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Preference number: 1 (lower is better) Translates to: QGRWVRLEPEDPSPG*SCHVAGHKAGMCDT Trigger: TGTGTCACACATACCTGCCTTGTGTCCCGCTACATGGCAGGAGCAGCCAGGGCTGGGGTCTTCTGGTTCCAGCCTCACCCACCTTCCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| 3UTR GCA 90 bp | AAGCACTGTCACCTTCCCTGGAAGGTGAGGAGAAGCTTGGAACTCTaGAGTGCAGTCTTCTCAGATCTGTTCGGTGGGGAGGGTAGTGCT | + |
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Preference number: 1 (lower is better) Translates to: KHCHLPWKVRRSLEL*SAVFSDLFGGEGSA Trigger: AGCACTACCCTCCCCACCGAACAGATCTGAGAAGACTGCACTGCAGAGTTCCAAGCTTCTCCTCACCTTCCAGGGAAGGTGACAGTGCTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| 3UTR CCA 90 bp | ACCAGCAAGCAAGAGGAGGCCCATGAAAAGCCAGTAGTGATGAAATaGGGACCCAGAGCTAGTCAGCGTGAGATAGATCAGGGAAGGTGG | + |
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Preference number: 1 (lower is better) Translates to: TSKQEEAHEKPVVMK*GPRASQREIDQGRW Trigger: CCACCTTCCCTGATCTATCTCACGCTGACTAGCTCTGGGTCCCCATTTCATCACTACTGGCTTTTCATGGGCCTCCTCTTGCTTGCTGGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| 3UTR-3UTR CCA 90 bp | CCTGGCTGCTCCTGCCATGTAGCGGGACACAAGGCAGGTATGTGTGACACAGACCACTGTCACCTTCCCTaGAAGGTGAGGAGAAGCTTG | + |
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Preference number: 2 (lower is better) Translates to: PGCSCHVAGHKAGMCDTDHCHLP*KVRRSL Trigger: CAAGCTTCTCCTCACCTTCCAGGGAAGGTGACAGTG...GTCTGTGTCACACATACCTGCCTTGTGTCCCGCTACATGGCAGGAGCAGCCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| 3UTR-3UTR GCA 90 bp | CCTGGCTGCTCCTGCCATGTAGCGGGACACAAGGCAGGTATGTGTGACACAGACCTTGGAACTCTGCAGTaGAGTCTTCTCAGATCTGTT | + |
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Preference number: 2 (lower is better) Translates to: PGCSCHVAGHKAGMCDTDLGTLQ*SLLRSV Trigger: AACAGATCTGAGAAGACTGCACTGCAGAGTTCCAAG...GTCTGTGTCACACATACCTGCCTTGTGTCCCGCTACATGGCAGGAGCAGCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| 3UTR-3UTR TCA 90 bp | AGTGAAATTGTGAGATTAGAGCAGCACAGAGGCCGTCTAGGTGAGTCATGGGGAACCTTCCCTGGAAGGTaGGGAGAAGCTTGGAACTCT | + |
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Preference number: 2 (lower is better) Translates to: SEIVRLEQHRGRLGESWGTFPGR*GEAWNS Trigger: AGAGTTCCAAGCTTCTCCTCACCTTCCAGGGAAGGT...TCCCCATGACTCACCTAGACGGCCTCTGTGCTGCTCTAATCTCACAATTTCACT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| 3UTR CCA 72 bp | AAGGTGGGTGAGGCTGGAACCAGAAGACCCCAGCCCTaGCTGCTCCTGCCATGTAGCGGGACACAAGGCAGG | + |
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Preference number: 3 (lower is better) Translates to: KVGEAGTRRPQP*LLLPCSGTQGR Trigger: CCTGCCTTGTGTCCCGCTACATGGCAGGAGCAGCCAGGGCTGGGGTCTTCTGGTTCCAGCCTCACCCACCTT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| 3UTR GCA 72 bp | TGGGTGAGGCTGGAACCAGAAGACCCCAGCCCTGGCTaGTCCTGCCATGTAGCGGGACACAAGGCAGGTATG | + |
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Preference number: 3 (lower is better) Translates to: WVRLEPEDPSPG*SCHVAGHKAGM Trigger: CATACCTGCCTTGTGTCCCGCTACATGGCAGGAGCAGCCAGGGCTGGGGTCTTCTGGTTCCAGCCTCACCCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| 3UTR CCA 72 bp | CCCAGAGCTAGTCAGCGTGAGATAGATCAGGGAAGGTaGGTGAGGCTGGAACCAGAAGACCCCAGCCCTGGC | + |
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Preference number: 3 (lower is better) Translates to: PRASQREIDQGR*VRLEPEDPSPG Trigger: GCCAGGGCTGGGGTCTTCTGGTTCCAGCCTCACCCACCTTCCCTGATCTATCTCACGCTGACTAGCTCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| 3UTR GCA 72 bp | GTAGCGGGACACAAGGCAGGTATGTGTGACACAGACTaGCAGGGTGGCCTTTGCAAAAGACAGCCCTGGGCT | + |
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Preference number: 3 (lower is better) Translates to: VAGHKAGMCDTD*QGGLCKRQPWA Trigger: AGCCCAGGGCTGTCTTTTGCAAAGGCCACCCTGGCAGTCTGTGTCACACATACCTGCCTTGTGTCCCGCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| 3UTR TCA 72 bp | AGCCCTGGGCTTAGCTGGGTCCTGAGGAGTCGGGAGTaGAATTGTGAGATTAGAGCAGCACAGAGGCCGTCT | + |
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Preference number: 3 (lower is better) Translates to: SPGLSWVLRSRE*NCEIRAAQRPS Trigger: AGACGGCCTCTGTGCTGCTCTAATCTCACAATTTCACTCCCGACTCCTCAGGACCCAGCTAAGCCCAGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| 3UTR GCA 72 bp | CACCTTCCCTGGAAGGTGAGGAGAAGCTTGGAACTCTaGAGTGCAGTCTTCTCAGATCTGTTCGGTGGGGAG | + |
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Preference number: 3 (lower is better) Translates to: HLPWKVRRSLEL*SAVFSDLFGGE Trigger: CTCCCCACCGAACAGATCTGAGAAGACTGCACTGCAGAGTTCCAAGCTTCTCCTCACCTTCCAGGGAAGGTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| 3UTR CCA 72 bp | CAAGAGGAGGCCCATGAAAAGCCAGTAGTGATGAAATaGGGACCCAGAGCTAGTCAGCGTGAGATAGATCAG | + |
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Preference number: 3 (lower is better) Translates to: QEEAHEKPVVMK*GPRASQREIDQ Trigger: CTGATCTATCTCACGCTGACTAGCTCTGGGTCCCCATTTCATCACTACTGGCTTTTCATGGGCCTCCTCTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| 3UTR TCA 72 bp | AATTGTGAGATTAGAGCAGCACAGAGGCCGTCTAGGTaGGTCATGGGGACTGATATCCCAGTTGTAGCAAAG | + |
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Preference number: 3 (lower is better) Translates to: NCEIRAAQRPSR*VMGTDIPVVAK Trigger: CTTTGCTACAACTGGGATATCAGTCCCCATGACTCACCTAGACGGCCTCTGTGCTGCTCTAATCTCACAATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR TCA 90 bp | GAGAAGCTTGGAACTCTGCAGTGCAGTCTTCTCAGATCTGTTCGGTGGGGAGGGGGCCTGGCCTTCCCCTaGGGCCTGGCGCTTTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: EKLGTLQCSLLRSVRWGGGLAFP*GLALCS Trigger: GGAGCAAAGCGCCAGGCCTCAGGGGAAGGCCAGGCC...CCCTCCCCACCGAACAGATCTGAGAAGACTGCACTGCAGAGTTCCAAGCTTCTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR GCA 90 bp | CCTGGCTGCTCCTGCCATGTAGCGGGACACAAGGCAGGTATGTGTGACACAGACAAGAGGCTGGAAGGCTaGAGGCTTGCACCCCGGGAG | + |
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Preference number: 4 (lower is better) Translates to: PGCSCHVAGHKAGMCDTDKRLEG*RLAPRE Trigger: CTCCCGGGGTGCAAGCCTGCAGCCTTCCAGCCTCTT...GTCTGTGTCACACATACCTGCCTTGTGTCCCGCTACATGGCAGGAGCAGCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR GCA 90 bp | GAGAAGCTTGGAACTCTGCAGTGCAGTCTTCTCAGATCTGTTCGGTGGGGAGGGCCCCGCAGCCATTCTTaGAGCGCAGGCCAGCAGCCC | + |
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Preference number: 4 (lower is better) Translates to: EKLGTLQCSLLRSVRWGGPRSHS*SAGQQP Trigger: GGGCTGCTGGCCTGCGCTGCAAGAATGGCTGCGGGG...CCCTCCCCACCGAACAGATCTGAGAAGACTGCACTGCAGAGTTCCAAGCTTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR CCA 90 bp | GCGGGACACAAGGCAGGTATGTGTGACACAGACTGCCAGGGTGGCCTTTGCAAATCCTCTGCCGCCTCGTaGACAGCCAGGGCCCTTAGC | + |
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Preference number: 4 (lower is better) Translates to: AGHKAGMCDTDCQGGLCKSSAAS*TARALS Trigger: GCTAAGGGCCCTGGCTGTCCACGAGGCGGCAGAGGA...TTTGCAAAGGCCACCCTGGCAGTCTGTGTCACACATACCTGCCTTGTGTCCCGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR TCA 90 bp | GCGGGACACAAGGCAGGTATGTGTGACACAGACTGCCAGGGTGGCCTTTGCAAACCCCAGGACCCCTTCTaGTTCTCCCAGGGTGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: AGHKAGMCDTDCQGGLCKPQDPF*FSQGAG Trigger: TCCAGCACCCTGGGAGAATCAGAAGGGGTCCTGGGG...TTTGCAAAGGCCACCCTGGCAGTCTGTGTCACACATACCTGCCTTGTGTCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR CCA 90 bp | CCTGGCTGCTCCTGCCATGTAGCGGGACACAAGGCAGGTATGTGTGACACAGACAGCCCCAGCTGGACTTaGTCGAGGAGGAAGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: PGCSCHVAGHKAGMCDTDSPSWT*SRRKCR Trigger: CCTGCACTTCCTCCTCGACCAAGTCCAGCTGGGGCT...GTCTGTGTCACACATACCTGCCTTGTGTCCCGCTACATGGCAGGAGCAGCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR CCA 90 bp | AGTGAAATTGTGAGATTAGAGCAGCACAGAGGCCGTCTAGGTGAGTCATGGGGAGGGAGGGAGGAGGCCTaGCCTTCCCCTGAGGCCTGG | + |
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Preference number: 4 (lower is better) Translates to: SEIVRLEQHRGRLGESWGGREEA*PSPEAW Trigger: CCAGGCCTCAGGGGAAGGCCAGGCCTCCTCCCTCCC...TCCCCATGACTCACCTAGACGGCCTCTGTGCTGCTCTAATCTCACAATTTCACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR GCA 90 bp | ATGGGGACTGATATCCCAGTTGTAGCAAAGAAGCCAGGGCCAGGAGAGGAAGCACTCCAGGACAGCACCTaGAGCCCCAGGACCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: MGTDIPVVAKKPGPGEEALQDST*SPRTPS Trigger: AGAAGGGGTCCTGGGGCTGCAGGTGCTGTCCTGGAG...TGCTTCCTCTCCTGGCCCTGGCTTCTTTGCTACAACTGGGATATCAGTCCCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR CCA 90 bp | AGTCAGCGTGAGATAGATCAGGGAAGGTGGGTGAGGCTGGAACCAGAAGACCCCGATGCAGCAAGAGGCTaGAAGGCTGCAGGCTTGCAC | + |
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Preference number: 4 (lower is better) Translates to: SQREIDQGRWVRLEPEDPDAARG*KAAGLH Trigger: GTGCAAGCCTGCAGCCTTCCAGCCTCTTGCTGCATC...GGGGTCTTCTGGTTCCAGCCTCACCCACCTTCCCTGATCTATCTCACGCTGACT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR TCA 90 bp | AGTGAAATTGTGAGATTAGAGCAGCACAGAGGCCGTCTAGGTGAGTCATGGGGAACAGGCTCACCACGCTaGCCACCAGGCCTCCCAGCA | + |
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Preference number: 4 (lower is better) Translates to: SEIVRLEQHRGRLGESWGTGSPR*PPGLPA Trigger: TGCTGGGAGGCCTGGTGGTCAGCGTGGTGAGCCTGT...TCCCCATGACTCACCTAGACGGCCTCTGTGCTGCTCTAATCTCACAATTTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR TCA 90 bp | GGAGAAGCTTGGAACTCTGCAGTGCAGTCTTCTCAGATCTGTTCGGTGGGGAGGTCCAGAGGGTTACCATaGGAACCCCTGCCAGGGCTT | + |
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Preference number: 4 (lower is better) Translates to: GEAWNSAVQSSQICSVGRSRGLP*EPLPGL Trigger: AAGCCCTGGCAGGGGTTCTCATGGTAACCCTCTGGA...CCTCCCCACCGAACAGATCTGAGAAGACTGCACTGCAGAGTTCCAAGCTTCTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR GCA 90 bp | AGTGAAATTGTGAGATTAGAGCAGCACAGAGGCCGTCTAGGTGAGTCATGGGGAGGAAGGCTGCAGGCTTaGACCCCGGGAGAGCTGCAG | + |
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Preference number: 4 (lower is better) Translates to: SEIVRLEQHRGRLGESWGGRLQA*TPGELQ Trigger: CTGCAGCTCTCCCGGGGTGCAAGCCTGCAGCCTTCC...TCCCCATGACTCACCTAGACGGCCTCTGTGCTGCTCTAATCTCACAATTTCACT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR GCA 90 bp | ATGGGGACTGATATCCCAGTTGTAGCAAAGAAGCCAGGGCCAGGAGAGGAAGCATACCATGAGAACCCCTaGCAGGGCTTCCAGTGCCAG | + |
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Preference number: 4 (lower is better) Translates to: MGTDIPVVAKKPGPGEEAYHENP*QGFQCQ Trigger: CTGGCACTGGAAGCCCTGGCAGGGGTTCTCATGGTA...TGCTTCCTCTCCTGGCCCTGGCTTCTTTGCTACAACTGGGATATCAGTCCCCAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR GCA 90 bp | GAGAAGCTTGGAACTCTGCAGTGCAGTCTTCTCAGATCTGTTCGGTGGGGAGGGGCAGGCCAGCAGCCCTaGAGGAATACTACTTGTCCA | + |
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Preference number: 4 (lower is better) Translates to: EKLGTLQCSLLRSVRWGGAGQQP*RNTTCP Trigger: TGGACAAGTAGTATTCCTGCAGGGCTGCTGGCCTGC...CCCTCCCCACCGAACAGATCTGAGAAGACTGCACTGCAGAGTTCCAAGCTTCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR CCA 90 bp | AGTCAGCGTGAGATAGATCAGGGAAGGTGGGTGAGGCTGGAACCAGAAGACCCCGCTCCGAAACCACATTaGGTGTTCACTACAGCTCCG | + |
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Preference number: 4 (lower is better) Translates to: SQREIDQGRWVRLEPEDPAPKPH*VFTTAP Trigger: CGGAGCTGTAGTGAACACCCAATGTGGTTTCGGAGC...GGGGTCTTCTGGTTCCAGCCTCACCCACCTTCCCTGATCTATCTCACGCTGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR GCA 90 bp | ATGGGGACTGATATCCCAGTTGTAGCAAAGAAGCCAGGGCCAGGAGAGGAAGCATGCCAGGGCTTCCAGTaGCAGACAAAAGAGGACAGC | + |
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Preference number: 4 (lower is better) Translates to: MGTDIPVVAKKPGPGEEACQGFQ*QTKEDS Trigger: GCTGTCCTCTTTTGTCTGGCACTGGAAGCCCTGGCA...TGCTTCCTCTCCTGGCCCTGGCTTCTTTGCTACAACTGGGATATCAGTCCCCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR GCA 90 bp | CCTGGCTGCTCCTGCCATGTAGCGGGACACAAGGCAGGTATGTGTGACACAGACTACTTCAGGCTATCTTaGAGTGGCTTCCAGAGGGTT | + |
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Preference number: 4 (lower is better) Translates to: PGCSCHVAGHKAGMCDTDYFRLS*SGFQRV Trigger: AACCCTCTGGAAGCCACTGCAAGATAGCCTGAAGTA...GTCTGTGTCACACATACCTGCCTTGTGTCCCGCTACATGGCAGGAGCAGCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR CCA 90 bp | CCTGGCTGCTCCTGCCATGTAGCGGGACACAAGGCAGGTATGTGTGACACAGACATTCTCCCAGGGTGCTaGACATGGAATATTTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: PGCSCHVAGHKAGMCDTDILPGC*TWNICG Trigger: ACCGCAAATATTCCATGTCCAGCACCCTGGGAGAAT...GTCTGTGTCACACATACCTGCCTTGTGTCCCGCTACATGGCAGGAGCAGCCAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR CCA 90 bp | AGTGAAATTGTGAGATTAGAGCAGCACAGAGGCCGTCTAGGTGAGTCATGGGGACACAGTTGCTCCCTGTaGAAAGGGGGAGGGAGGAGG | + |
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Preference number: 4 (lower is better) Translates to: SEIVRLEQHRGRLGESWGHSCSL*KGGGRR Trigger: CCTCCTCCCTCCCCCTTTCCACAGGGAGCAACTGTG...TCCCCATGACTCACCTAGACGGCCTCTGTGCTGCTCTAATCTCACAATTTCACT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR GCA 90 bp | CCTGGCTGCTCCTGCCATGTAGCGGGACACAAGGCAGGTATGTGTGACACAGACTGGACATGGAATATTTaGGGTAGGTGGACTGTTCCT | + |
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Preference number: 4 (lower is better) Translates to: PGCSCHVAGHKAGMCDTDWTWNI*GRWTVP Trigger: AGGAACAGTCCACCTACCGCAAATATTCCATGTCCA...GTCTGTGTCACACATACCTGCCTTGTGTCCCGCTACATGGCAGGAGCAGCCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR GCA 90 bp | ATGGGGACTGATATCCCAGTTGTAGCAAAGAAGCCAGGGCCAGGAGAGGAAGCAGCCCCACAGTACCAGTaGAACAGGCAGCTATTCTCA | + |
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Preference number: 4 (lower is better) Translates to: MGTDIPVVAKKPGPGEEAAPQYQ*NRQLFS Trigger: TGAGAATAGCTGCCTGTTGCACTGGTACTGTGGGGC...TGCTTCCTCTCCTGGCCCTGGCTTCTTTGCTACAACTGGGATATCAGTCCCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR GCA 90 bp | GAGAAGCTTGGAACTCTGCAGTGCAGTCTTCTCAGATCTGTTCGGTGGGGAGGGCTGATTCTCCCAGGGTaGTGGACATGGAATATTTGC | + |
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Preference number: 4 (lower is better) Translates to: EKLGTLQCSLLRSVRWGGLILPG*WTWNIC Trigger: GCAAATATTCCATGTCCAGCACCCTGGGAGAATCAG...CCCTCCCCACCGAACAGATCTGAGAAGACTGCACTGCAGAGTTCCAAGCTTCTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR CCA 90 bp | AGTGAAATTGTGAGATTAGAGCAGCACAGAGGCCGTCTAGGTGAGTCATGGGGACAGGCTATCTTGCAGTaGCTTCCAGAGGGTTACCAT | + |
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Preference number: 4 (lower is better) Translates to: SEIVRLEQHRGRLGESWGQAILQ*LPEGYH Trigger: ATGGTAACCCTCTGGAAGCCACTGCAAGATAGCCTG...TCCCCATGACTCACCTAGACGGCCTCTGTGCTGCTCTAATCTCACAATTTCACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR GCA 90 bp | AGTGAAATTGTGAGATTAGAGCAGCACAGAGGCCGTCTAGGTGAGTCATGGGGAGAGACAGCAAGGGGCTaGATTCTTCTTCCTTCATCA | + |
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Preference number: 4 (lower is better) Translates to: SEIVRLEQHRGRLGESWGETARG*ILLPSS Trigger: TGATGAAGGAAGAAGAATGCAGCCCCTTGCTGTCTC...TCCCCATGACTCACCTAGACGGCCTCTGTGCTGCTCTAATCTCACAATTTCACT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR CAA 90 bp | GGAGAAGCTTGGAACTCTGCAGTGCAGTCTTCTCAGATCTGTTCGGTGGGGAGGCCCCCGCAGCCATTCTaGCAGCGCAGGCCAGCAGCC | + |
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Preference number: 5 (lower is better) Translates to: GEAWNSAVQSSQICSVGRPPQPF*QRRPAA Trigger: GGCTGCTGGCCTGCGCTGCAAGAATGGCTGCGGGGG...CCTCCCCACCGAACAGATCTGAGAAGACTGCACTGCAGAGTTCCAAGCTTCTCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR CAA 90 bp | GCGGGACACAAGGCAGGTATGTGTGACACAGACTGCCAGGGTGGCCTTTGCAAATGGAAGGCTGCAGGCTaGCACCCCGGGAGAGCTGCA | + |
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Preference number: 5 (lower is better) Translates to: AGHKAGMCDTDCQGGLCKWKAAG*HPGRAA Trigger: TGCAGCTCTCCCGGGGTGCAAGCCTGCAGCCTTCCA...TTTGCAAAGGCCACCCTGGCAGTCTGTGTCACACATACCTGCCTTGTGTCCCGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS GCA 90 bp | CCAGTATTCCCCCGCAGCCATTCTTGCAGCGCAGGCCAGCAGCCCTaGAGGAATACTACTTGTCCAGCCACATTCTGGTCCAGGCCCAGT | + |
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Preference number: 5 (lower is better) Translates to: PVFPRSHSCSAGQQP*RNTTCPATFWSRPS Trigger: ACTGGGCCTGGACCAGAATGTGGCTGGACAAGTAGTATTCCTGCAGGGCTGCTGGCCTGCGCTGCAAGAATGGCTGCGGGGGAATACTGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR CAA 90 bp | GCGGGACACAAGGCAGGTATGTGTGACACAGACTGCCAGGGTGGCCTTTGCAAACAGCCCCAGCTGGACTaGGTCGAGGAGGAAGTGCAG | + |
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Preference number: 5 (lower is better) Translates to: AGHKAGMCDTDCQGGLCKQPQLD*VEEEVQ Trigger: CTGCACTTCCTCCTCGACCAAGTCCAGCTGGGGCTG...TTTGCAAAGGCCACCCTGGCAGTCTGTGTCACACATACCTGCCTTGTGTCCCGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS GCA 90 bp | CCAGGACCCCTTCTGATTCTCCCAGGGTGCTGGACATGGAATATTTaGGGTAGGTGGACTGTTCCTGGTGAGTGGGTGCTCTCGGCCAGC | + |
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Preference number: 5 (lower is better) Translates to: PGPLLILPGCWTWNI*GRWTVPGEWVLSAS Trigger: GCTGGCCGAGAGCACCCACTCACCAGGAACAGTCCACCTACCGCAAATATTCCATGTCCAGCACCCTGGGAGAATCAGAAGGGGTCCTGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS GCA 90 bp | ACAGCACAGTCACCTATGGCACCAGTATTCCCCCGCAGCCATTCTTaGAGCGCAGGCCAGCAGCCCTGCAGGAATACTACTTGTCCAGCC | + |
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Preference number: 5 (lower is better) Translates to: TAQSPMAPVFPRSHS*SAGQQPCRNTTCPA Trigger: GGCTGGACAAGTAGTATTCCTGCAGGGCTGCTGGCCTGCGCTGCAAGAATGGCTGCGGGGGAATACTGGTGCCATAGGTGACTGTGCTGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CCA 90 bp | CCTGCAGCCCCAGGACCCCTTCTGATTCTCCCAGGGTGCTGGACATaGAATATTTGCGGTAGGTGGACTGTTCCTGGTGAGTGGGTGCTC | + |
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Preference number: 5 (lower is better) Translates to: PAAPGPLLILPGCWT*NICGRWTVPGEWVL Trigger: GAGCACCCACTCACCAGGAACAGTCCACCTACCGCAAATATTCCATGTCCAGCACCCTGGGAGAATCAGAAGGGGTCCTGGGGCTGCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CCA 90 bp | GCCAGGGCCCTTAGCAGGCAGGCAGCCAACAGGAGTTCAGTCCCTTaGATCATGACAACGGCCACAGCACAGTCACCTATGGCACCAGTA | + |
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Preference number: 5 (lower is better) Translates to: ARALSRQAANRSSVP*IMTTATAQSPMAPV Trigger: TACTGGTGCCATAGGTGACTGTGCTGTGGCCGTTGTCATGATCCAAGGGACTGAACTCCTGTTGGCTGCCTGCCTGCTAAGGGCCCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR CAA 90 bp | AGTCAGCGTGAGATAGATCAGGGAAGGTGGGTGAGGCTGGAACCAGAAGACCCCTACTGCCCCACAGCATaGCAGCCCCAGCTGGACTTG | + |
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Preference number: 5 (lower is better) Translates to: SQREIDQGRWVRLEPEDPYCPTA*QPQLDL Trigger: CAAGTCCAGCTGGGGCTGCAATGCTGTGGGGCAGTA...GGGGTCTTCTGGTTCCAGCCTCACCCACCTTCCCTGATCTATCTCACGCTGACT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS GCA 90 bp | AGGACAGCACCTGCAGCCCCAGGACCCCTTCTGATTCTCCCAGGGTaGTGGACATGGAATATTTGCGGTAGGTGGACTGTTCCTGGTGAG | + |
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Preference number: 5 (lower is better) Translates to: RTAPAAPGPLLILPG*WTWNICGRWTVPGE Trigger: CTCACCAGGAACAGTCCACCTACCGCAAATATTCCATGTCCAGCACCCTGGGAGAATCAGAAGGGGTCCTGGGGCTGCAGGTGCTGTCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CCA 90 bp | ACAGCACCTGCAGCCCCAGGACCCCTTCTGATTCTCCCAGGGTGCTaGACATGGAATATTTGCGGTAGGTGGACTGTTCCTGGTGAGTGG | + |
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Preference number: 5 (lower is better) Translates to: TAPAAPGPLLILPGC*TWNICGRWTVPGEW Trigger: CCACTCACCAGGAACAGTCCACCTACCGCAAATATTCCATGTCCAGCACCCTGGGAGAATCAGAAGGGGTCCTGGGGCTGCAGGTGCTGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CCA 90 bp | GTTCACTACAGCTCCGTCTTCCTGGGGGTTGATGCAGCAAGAGGCTaGAAGGCTGCAGGCTTGCACCCCGGGAGAGCTGCAGTTAAAGTA | + |
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Preference number: 5 (lower is better) Translates to: VHYSSVFLGVDAARG*KAAGLHPGRAAVKV Trigger: TACTTTAACTGCAGCTCTCCCGGGGTGCAAGCCTGCAGCCTTCCAGCCTCTTGCTGCATCAACCCCCAGGAAGACGGAGCTGTAGTGAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CCA 90 bp | GCAGGCCAGCAGCCCTGCAGGAATACTACTTGTCCAGCCACATTCTaGTCCAGGCCCAGTGCTCCGAAACCACATTGGGTGTTCACTACA | + |
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Preference number: 5 (lower is better) Translates to: AGQQPCRNTTCPATF*SRPSAPKPHWVFTT Trigger: TGTAGTGAACACCCAATGTGGTTTCGGAGCACTGGGCCTGGACCAGAATGTGGCTGGACAAGTAGTATTCCTGCAGGGCTGCTGGCCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS GCA 90 bp | GCTGCAGTTAAAGTACAGGTTCTGTTGCCAGTCCTGGTAGGATACTaGCCCACAGCATTGCAGCCCCAGCTGGACTTGGTCGAGGAGGAA | + |
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Preference number: 5 (lower is better) Translates to: AAVKVQVLLPVLVGY*PTALQPQLDLVEEE Trigger: TTCCTCCTCGACCAAGTCCAGCTGGGGCTGCAATGCTGTGGGGCAGTATCCTACCAGGACTGGCAACAGAACCTGTACTTTAACTGCAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR CAA 90 bp | CCTGGCTGCTCCTGCCATGTAGCGGGACACAAGGCAGGTATGTGTGACACAGACAGATATTTGACACAGTaGCTCCCTGTGGAAAGGGGG | + |
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Preference number: 5 (lower is better) Translates to: PGCSCHVAGHKAGMCDTDRYLTQ*LPVERG Trigger: CCCCCTTTCCACAGGGAGCAACTGTGTCAAATATCT...GTCTGTGTCACACATACCTGCCTTGTGTCCCGCTACATGGCAGGAGCAGCCAGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CCA 90 bp | GCATTGCAGCCCCAGCTGGACTTGGTCGAGGAGGAAGTGCAGGTCTaGGTCATCCCAGTAGTGAATGATGGCTGCATGAAGTGTATACTT | + |
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Preference number: 5 (lower is better) Translates to: ALQPQLDLVEEEVQV*VIPVVNDGCMKCIL Trigger: AAGTATACACTTCATGCAGCCATCATTCACTACTGGGATGACCCAGACCTGCACTTCCTCCTCGACCAAGTCCAGCTGGGGCTGCAATGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS-3UTR CAA 90 bp | GCGGGACACAAGGCAGGTATGTGTGACACAGACTGCCAGGGTGGCCTTTGCAAAAAAGTACAGGTTCTGTaGCCAGTCCTGGTAGGATAC | + |
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Preference number: 5 (lower is better) Translates to: AGHKAGMCDTDCQGGLCKKVQVL*PVLVGY Trigger: GTATCCTACCAGGACTGGCAACAGAACCTGTACTTT...TTTGCAAAGGCCACCCTGGCAGTCTGTGTCACACATACCTGCCTTGTGTCCCGC 53% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS TCA 90 bp | CTTGGTCGAGGAGGAAGTGCAGGTCTGGGTCATCCCAGTAGTGAATaGTGGCTGCATGAAGTGTATACTTCAGGCTATCTTGCAGTGGCT | + |
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Preference number: 5 (lower is better) Translates to: LGRGGSAGLGHPSSE*WLHEVYTSGYLAVA Trigger: AGCCACTGCAAGATAGCCTGAAGTATACACTTCATGCAGCCATCATTCACTACTGGGATGACCCAGACCTGCACTTCCTCCTCGACCAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS GCA 90 bp | GAGGAGGAAGTGCAGGTCTGGGTCATCCCAGTAGTGAATGATGGCTaGATGAAGTGTATACTTCAGGCTATCTTGCAGTGGCTTCCAGAG | + |
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Preference number: 5 (lower is better) Translates to: EEEVQVWVIPVVNDG*MKCILQAILQWLPE Trigger: CTCTGGAAGCCACTGCAAGATAGCCTGAAGTATACACTTCATGCAGCCATCATTCACTACTGGGATGACCCAGACCTGCACTTCCTCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CCA 72 bp | CACAAGGGGCCTGCTTCTATGTCCTCTGCCGCCTCGTaGACAGCCAGGGCCCTTAGCAGGCAGGCAGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: HKGPASMSSAAS*TARALSRQAAN Trigger: GTTGGCTGCCTGCCTGCTAAGGGCCCTGGCTGTCCACGAGGCGGCAGAGGACATAGAAGCAGGCCCCTTGTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS GCA 72 bp | CCCCGCAGCCATTCTTGCAGCGCAGGCCAGCAGCCCTaGAGGAATACTACTTGTCCAGCCACATTCTGGTCC | + |
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Preference number: 6 (lower is better) Translates to: PRSHSCSAGQQP*RNTTCPATFWS Trigger: GGACCAGAATGTGGCTGGACAAGTAGTATTCCTGCAGGGCTGCTGGCCTGCGCTGCAAGAATGGCTGCGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CAA 72 bp | GGATACTGCCCCACAGCATTGCAGCCCCAGCTGGACTaGGTCGAGGAGGAAGTGCAGGTCTGGGTCATCCCA | + |
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Preference number: 6 (lower is better) Translates to: GYCPTALQPQLD*VEEEVQVWVIP Trigger: TGGGATGACCCAGACCTGCACTTCCTCCTCGACCAAGTCCAGCTGGGGCTGCAATGCTGTGGGGCAGTATCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CAA 72 bp | TTGCAGCGCAGGCCAGCAGCCCTGCAGGAATACTACTaGTCCAGCCACATTCTGGTCCAGGCCCAGTGCTCC | + |
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Preference number: 6 (lower is better) Translates to: LQRRPAALQEYY*SSHILVQAQCS Trigger: GGAGCACTGGGCCTGGACCAGAATGTGGCTGGACAAGTAGTATTCCTGCAGGGCTGCTGGCCTGCGCTGCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CCA 72 bp | CTCCCAGGGTGCTGGACATGGAATATTTGCGGTAGGTaGACTGTTCCTGGTGAGTGGGTGCTCTCGGCCAGC | + |
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Preference number: 6 (lower is better) Translates to: LPGCWTWNICGR*TVPGEWVLSAS Trigger: GCTGGCCGAGAGCACCCACTCACCAGGAACAGTCCACCTACCGCAAATATTCCATGTCCAGCACCCTGGGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CAA 72 bp | CTGTTGCCAGTCCTGGTAGGATACTGCCCCACAGCATaGCAGCCCCAGCTGGACTTGGTCGAGGAGGAAGTG | + |
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Preference number: 6 (lower is better) Translates to: LLPVLVGYCPTA*QPQLDLVEEEV Trigger: CACTTCCTCCTCGACCAAGTCCAGCTGGGGCTGCAATGCTGTGGGGCAGTATCCTACCAGGACTGGCAACAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CAA 90 bp | GTACAGGTTCTGTTGCCAGTCCTGGTAGGATACTGCCCCACAGCATaGCAGCCCCAGCTGGACTTGGTCGAGGAGGAAGTGCAGGTCTGG | + |
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Preference number: 6 (lower is better) Translates to: VQVLLPVLVGYCPTA*QPQLDLVEEEVQVW Trigger: CCAGACCTGCACTTCCTCCTCGACCAAGTCCAGCTGGGGCTGCAATGCTGTGGGGCAGTATCCTACCAGGACTGGCAACAGAACCTGTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CAA 90 bp | CAGCCATTCTTGCAGCGCAGGCCAGCAGCCCTGCAGGAATACTACTaGTCCAGCCACATTCTGGTCCAGGCCCAGTGCTCCGAAACCACA | + |
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Preference number: 6 (lower is better) Translates to: QPFLQRRPAALQEYY*SSHILVQAQCSETT Trigger: TGTGGTTTCGGAGCACTGGGCCTGGACCAGAATGTGGCTGGACAAGTAGTATTCCTGCAGGGCTGCTGGCCTGCGCTGCAAGAATGGCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CAA 90 bp | CACAGCACAGTCACCTATGGCACCAGTATTCCCCCGCAGCCATTCTaGCAGCGCAGGCCAGCAGCCCTGCAGGAATACTACTTGTCCAGC | + |
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Preference number: 6 (lower is better) Translates to: HSTVTYGTSIPPQPF*QRRPAALQEYYLSS Trigger: GCTGGACAAGTAGTATTCCTGCAGGGCTGCTGGCCTGCGCTGCAAGAATGGCTGCGGGGGAATACTGGTGCCATAGGTGACTGTGCTGTG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CAA 90 bp | GTCCTGGTAGGATACTGCCCCACAGCATTGCAGCCCCAGCTGGACTaGGTCGAGGAGGAAGTGCAGGTCTGGGTCATCCCAGTAGTGAAT | + |
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Preference number: 6 (lower is better) Translates to: VLVGYCPTALQPQLD*VEEEVQVWVIPVVN Trigger: ATTCACTACTGGGATGACCCAGACCTGCACTTCCTCCTCGACCAAGTCCAGCTGGGGCTGCAATGCTGTGGGGCAGTATCCTACCAGGAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS GCA 72 bp | TCACCTATGGCACCAGTATTCCCCCGCAGCCATTCTTaGAGCGCAGGCCAGCAGCCCTGCAGGAATACTACT | + |
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Preference number: 6 (lower is better) Translates to: SPMAPVFPRSHS*SAGQQPCRNTT Trigger: AGTAGTATTCCTGCAGGGCTGCTGGCCTGCGCTGCAAGAATGGCTGCGGGGGAATACTGGTGCCATAGGTGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS GCA 72 bp | CCTGCAGCCCCAGGACCCCTTCTGATTCTCCCAGGGTaGTGGACATGGAATATTTGCGGTAGGTGGACTGTT | + |
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Preference number: 6 (lower is better) Translates to: PAAPGPLLILPG*WTWNICGRWTV Trigger: AACAGTCCACCTACCGCAAATATTCCATGTCCAGCACCCTGGGAGAATCAGAAGGGGTCCTGGGGCTGCAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CCA 72 bp | GCAGCCCCAGGACCCCTTCTGATTCTCCCAGGGTGCTaGACATGGAATATTTGCGGTAGGTGGACTGTTCCT | + |
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Preference number: 6 (lower is better) Translates to: AAPGPLLILPGC*TWNICGRWTVP Trigger: AGGAACAGTCCACCTACCGCAAATATTCCATGTCCAGCACCCTGGGAGAATCAGAAGGGGTCCTGGGGCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CCA 72 bp | CCCCAGCTGGACTTGGTCGAGGAGGAAGTGCAGGTCTaGGTCATCCCAGTAGTGAATGATGGCTGCATGAAG | + |
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Preference number: 6 (lower is better) Translates to: PQLDLVEEEVQV*VIPVVNDGCMK Trigger: CTTCATGCAGCCATCATTCACTACTGGGATGACCCAGACCTGCACTTCCTCCTCGACCAAGTCCAGCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS TCA 72 bp | TCAGGCTATCTTGCAGTGGCTTCCAGAGGGTTACCATaGGAACCCCTGCCAGGGCTTCCAGTGCCAGACAAA | + |
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Preference number: 6 (lower is better) Translates to: SGYLAVASRGLP*EPLPGLPVPDK Trigger: TTTGTCTGGCACTGGAAGCCCTGGCAGGGGTTCTCATGGTAACCCTCTGGAAGCCACTGCAAGATAGCCTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS GCA 72 bp | AAAGTACAGGTTCTGTTGCCAGTCCTGGTAGGATACTaGCCCACAGCATTGCAGCCCCAGCTGGACTTGGTC | + |
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Preference number: 6 (lower is better) Translates to: KVQVLLPVLVGY*PTALQPQLDLV Trigger: GACCAAGTCCAGCTGGGGCTGCAATGCTGTGGGGCAGTATCCTACCAGGACTGGCAACAGAACCTGTACTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CCA 72 bp | TGGAATATTTGCGGTAGGTGGACTGTTCCTGGTGAGTaGGTGCTCTCGGCCAGCAGTGTCCTGAGACAGCAA | + |
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Preference number: 6 (lower is better) Translates to: WNICGRWTVPGE*VLSASSVLRQQ Trigger: TTGCTGTCTCAGGACACTGCTGGCCGAGAGCACCCACTCACCAGGAACAGTCCACCTACCGCAAATATTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS GCA 72 bp | CTTCTGATTCTCCCAGGGTGCTGGACATGGAATATTTaGGGTAGGTGGACTGTTCCTGGTGAGTGGGTGCTC | + |
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Preference number: 6 (lower is better) Translates to: LLILPGCWTWNI*GRWTVPGEWVL Trigger: GAGCACCCACTCACCAGGAACAGTCCACCTACCGCAAATATTCCATGTCCAGCACCCTGGGAGAATCAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS GCA 72 bp | TACTACTTGTCCAGCCACATTCTGGTCCAGGCCCAGTaGTCCGAAACCACATTGGGTGTTCACTACAGCTCC | + |
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Preference number: 6 (lower is better) Translates to: YYLSSHILVQAQ*SETTLGVHYSS Trigger: GGAGCTGTAGTGAACACCCAATGTGGTTTCGGAGCACTGGGCCTGGACCAGAATGTGGCTGGACAAGTAGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS CAA 72 bp | AGGAAGTTAGAGAGGAAAATCAGATATTTGACACAGTaGCTCCCTGTGGAAAGGGGGAGGGAGGAGGCCTGG | + |
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Preference number: 6 (lower is better) Translates to: RKLERKIRYLTQ*LPVERGREEAW Trigger: CCAGGCCTCCTCCCTCCCCCTTTCCACAGGGAGCAACTGTGTCAAATATCTGATTTTCCTCTCTAACTTCCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS GCA 72 bp | GTGCAGGTCTGGGTCATCCCAGTAGTGAATGATGGCTaGATGAAGTGTATACTTCAGGCTATCTTGCAGTGG | + |
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Preference number: 6 (lower is better) Translates to: VQVWVIPVVNDG*MKCILQAILQW Trigger: CCACTGCAAGATAGCCTGAAGTATACACTTCATGCAGCCATCATTCACTACTGGGATGACCCAGACCTGCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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| CDS TCA 72 bp | GGAGGAAGTGCAGGTCTGGGTCATCCCAGTAGTGAATaGTGGCTGCATGAAGTGTATACTTCAGGCTATCTT | + |
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Preference number: 6 (lower is better) Translates to: GGSAGLGHPSSE*WLHEVYTSGYL Trigger: AAGATAGCCTGAAGTATACACTTCATGCAGCCATCATTCACTACTGGGATGACCCAGACCTGCACTTCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000044105.9 |
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