Pregenerated sensors for TSNAX (Mus musculus)
Ensembl gene IDs: ENSMUSG00000056820Ensembl transcript IDs: ENSMUST00000075896.7, ENSMUST00000212603.2
Found 103 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCAAGGGCAGGGTCAAGGCTTGGGTTGTCAGCACTGGGAGCACTGTaGCTGCTCCTCTGGGGTCCCAGGACGGCTGGGGTAGACAAGTGC | + |
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Preference number: 1 (lower is better) Translates to: PRAGSRLGLSALGAL*LLLWGPRTAGVDKC Trigger: GCACTTGTCTACCCCAGCCGTCCTGGGACCCCAGAGGAGCAGCCACAGTGCTCCCAGTGCTGACAACCCAAGCCTTGACCCTGCCCTTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR GCA 90 bp | CTGTGGCTGCTCCTCTGGGGTCCCAGGACGGCTGGGGTAGACAAGTaGACCACACCTAACACACGACAAAGGGCCTGGCTGCTCACAACC | + |
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Preference number: 1 (lower is better) Translates to: LWLLLWGPRTAGVDK*TTPNTRQRAWLLTT Trigger: GGTTGTGAGCAGCCAGGCCCTTTGTCGTGTGTTAGGTGTGGTGCACTTGTCTACCCCAGCCGTCCTGGGACCCCAGAGGAGCAGCCACAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR CCA 90 bp | TCTTTGGCAACATCGCTAGCTCACACCAAGGGCAGGGTCAAGGCTTaGGTTGTCAGCACTGGGAGCACTGTGGCTGCTCCTCTGGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: SLATSLAHTKGRVKA*VVSTGSTVAAPLGS Trigger: GGACCCCAGAGGAGCAGCCACAGTGCTCCCAGTGCTGACAACCCAAGCCTTGACCCTGCCCTTGGTGTGAGCTAGCGATGTTGCCAAAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR GCA 90 bp | CCCAGGGCTCCTCCCTGTACCCCAAGCAGCACTGGGGATACCAAGTaGACAGACCAAGTTCTAAACCCTCAGATGCAGTGTGCTGACTTC | + |
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Preference number: 1 (lower is better) Translates to: PRAPPCTPSSTGDTK*TDQVLNPQMQCADF Trigger: GAAGTCAGCACACTGCATCTGAGGGTTTAGAACTTGGTCTGTGCACTTGGTATCCCCAGTGCTGCTTGGGGTACAGGGAGGAGCCCTGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR CCA 90 bp | GTAGACAGACACGCCCAGGGCTCCTCCCTGTACCCCAAGCAGCACTaGGGATACCAAGTGCACAGACCAAGTTCTAAACCCTCAGATGCA | + |
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Preference number: 1 (lower is better) Translates to: VDRHAQGSSLYPKQH*GYQVHRPSSKPSDA Trigger: TGCATCTGAGGGTTTAGAACTTGGTCTGTGCACTTGGTATCCCCAGTGCTGCTTGGGGTACAGGGAGGAGCCCTGGGCGTGTCTGTCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR CCA 90 bp | GTCAGCTCCTTCCTTCCCACATCGGTGAGAAAGGAAAAGACAACGTaGGAAAGTGAACATCCAGATACCCATCAACTCTTCAGGAAAACT | + |
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Preference number: 1 (lower is better) Translates to: VSSFLPTSVRKEKTT*ESEHPDTHQLFRKT Trigger: AGTTTTCCTGAAGAGTTGATGGGTATCTGGATGTTCACTTTCCCACGTTGTCTTTTCCTTTCTCACCGATGTGGGAAGGAAGGAGCTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR TCA 90 bp | CTTCCTTCCCACATCGGTGAGAAAGGAAAAGACAACGTGGGAAAGTaGACATCCAGATACCCATCAACTCTTCAGGAAAACTGCTTCCTA | + |
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Preference number: 1 (lower is better) Translates to: LPSHIGEKGKDNVGK*TSRYPSTLQENCFL Trigger: TAGGAAGCAGTTTTCCTGAAGAGTTGATGGGTATCTGGATGTTCACTTTCCCACGTTGTCTTTTCCTTTCTCACCGATGTGGGAAGGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR-3UTR GCA 90 bp | CTGCTCCTCTGGGGTCCCAGGACGGCTGGGGTAGACAAGTGCACCACACCTAACGACAAAGGGCCTGGCTaGTCACAACCTACACACGAG | + |
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Preference number: 2 (lower is better) Translates to: LLLWGPRTAGVDKCTTPNDKGPG*SQPTHE Trigger: CTCGTGTGTAGGTTGTGAGCAGCCAGGCCCTTTGTC...GTTAGGTGTGGTGCACTTGTCTACCCCAGCCGTCCTGGGACCCCAGAGGAGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR-3UTR TCA 90 bp | GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCAGGCTCAGCTTATGTaGGGGGTGAACACAGGCTCA | + |
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Preference number: 2 (lower is better) Translates to: VDQAGLKLRNPPASASRVQAQLM*GVNTGS Trigger: TGAGCCTGTGTTCACCCCTCACATAAGCTGAGCCTG...CACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGGGCCAAAGCCATGATTaGCTGTGTCTCAGTTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: VDQAGLKLRNPPASASRVGQSHD*LCLSWP Trigger: GGGCCAACTGAGACACAGGCAATCATGGCTTTGGCC...CACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR-3UTR CCA 90 bp | GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGTGGCCCCTGACAAAGTaGAGAACAAGGCAAAAGCCG | + |
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Preference number: 2 (lower is better) Translates to: VDQAGLKLRNPPASASRVWPLTK*RTRQKP Trigger: CGGCTTTTGCCTTGTTCTCCACTTTGTCAGGGGCCA...CACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR-3UTR GCA 90 bp | GTAGACCAGGCTGGCCTCAAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGAGCAAACACTCAACCTaGTTTCTCCCCACTGTCTCT | + |
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Preference number: 2 (lower is better) Translates to: VDQAGLKLRNPPASASRVSKHST*FLPTVS Trigger: AGAGACAGTGGGGAGAAAGCAGGTTGAGTGTTTGCT...CACTCGGGAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR-3UTR GCA 90 bp | TGGCTGCTCCTCTGGGGTCCCAGGACGGCTGGGGTAGACAAGTGCACCACACCTCACAATAAACTCAGATaGACACTCAGAACAGTCTCA | + |
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Preference number: 2 (lower is better) Translates to: WLLLWGPRTAGVDKCTTPHNKLR*TLRTVS Trigger: TGAGACTGTTCTGAGTGTGCATCTGAGTTTATTGTG...AGGTGTGGTGCACTTGTCTACCCCAGCCGTCCTGGGACCCCAGAGGAGCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR-3UTR CCA 90 bp | CTTGGGTTGTCAGCACTGGGAGCACTGTGGCTGCTCCTCTGGGGTCCCAGGACGGAAACAACCTCCCTGTaGACAAACTTATATACAGCT | + |
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Preference number: 2 (lower is better) Translates to: LGLSALGALWLLLWGPRTETTSL*TNLYTA Trigger: AGCTGTATATAAGTTTGTCCACAGGGAGGTTGTTTC...CGTCCTGGGACCCCAGAGGAGCAGCCACAGTGCTCCCAGTGCTGACAACCCAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR-3UTR TCA 90 bp | GGAGCTGCTTGCATGCAGCAGGGCGCAGCTGGCCACTTCTGTGATTCCACTGTGACATTCGTGTCATCTTaGCTTCTAACAGTTTCTCTG | + |
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Preference number: 2 (lower is better) Translates to: GAACMQQGAAGHFCDSTVTFVSS*LLTVSL Trigger: CAGAGAAACTGTTAGAAGTCAAGATGACACGAATGT...CACAGTGGAATCACAGAAGTGGCCAGCTGCGCCCTGCTGCATGCAAGCAGCTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR-3UTR CCA 90 bp | GCAGGCCACGCTCAAGCCAGGCTCTCACCACAGATGACTCTGACTGACTGGGGAAAGGAAAAGACAACGTaGGAAAGTGAACATCCAGAT | + |
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Preference number: 2 (lower is better) Translates to: AGHAQARLSPQMTLTDWGKEKTT*ESEHPD Trigger: ATCTGGATGTTCACTTTCCCACGTTGTCTTTTCCTT...TCCCCAGTCAGTCAGAGTCATCTGTGGTGAGAGCCTGGCTTGAGCGTGGCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR-3UTR CCA 90 bp | GAACCCACGCCCGACGCTCCCTCCAGTGTTGGCCATCGTCTTATTGCTGAATTACAAACTAGTACAACTTaGAACGTCTACAGAAGCCAC | + |
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Preference number: 2 (lower is better) Translates to: EPTPDAPSSVGHRLIAELQTSTT*NVYRSH Trigger: GTGGCTTCTGTAGACGTTCCAAGTTGTACTAGTTTG...TAATTCAGCAATAAGACGATGGCCAACACTGGAGGGAGCGTCGGGCGTGGGTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR-3UTR GCA 90 bp | CTGACTTCCTCTCTGTCACCAGTGGAGACACTTAGACCTAGCGTCCCTGGGGAGCTCCACCAATCATTATaGTGCTGTATAAATCATACA | + |
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Preference number: 2 (lower is better) Translates to: LTSSLSPVETLRPSVPGELHQSL*CCINHT Trigger: TGTATGATTTATACAGCAGCATAATGATTGGTGGAG...CTCCCCAGGGACGCTAGGTCTAAGTGTCTCCACTGGTGACAGAGAGGAAGTCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR-3UTR TCA 90 bp | CCACACTTTTCCCTCCATAGACAGAATCACCCACTTAAGAGACTTCCTTCCACCACTCCAAGTTCAAAGTaGACTAAAGTAGGTGTGGCA | + |
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Preference number: 2 (lower is better) Translates to: PHFSLHRQNHPLKRLPSTTPSSK*TKVGVA Trigger: TGCCACACCTACTTTAGTTCACTTTGAACTTGGAGT...GGTGGAAGGAAGTCTCTTAAGTGGGTGATTCTGTCTATGGAGGGAAAAGTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR-3UTR TCA 90 bp | CACCACCAGGACAACAAGTCTAACTTACCAGGCATGTACACACTTTATTTTACTCCAGTATCTAAGTTGTaGAAAGTCACAGAACTCGTT | + |
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Preference number: 2 (lower is better) Translates to: HHQDNKSNLPGMYTLYFTPVSKL*KVTELV Trigger: AACGAGTTCTGTGACTTTTCACAACTTAGATACTGG...AGTAAAATAAAGTGTGTACATGCCTGGTAAGTTAGACTTGTTGTCCTGGTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR CCA 72 bp | GGGTCAAGGCTTGGGTTGTCAGCACTGGGAGCACTGTaGCTGCTCCTCTGGGGTCCCAGGACGGCTGGGGTA | + |
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Preference number: 3 (lower is better) Translates to: GSRLGLSALGAL*LLLWGPRTAGV Trigger: TACCCCAGCCGTCCTGGGACCCCAGAGGAGCAGCCACAGTGCTCCCAGTGCTGACAACCCAAGCCTTGACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR CCA 72 bp | CAAGCCAGGCTCTCACCACAGATGACTCTGACTGACTaGGGAGATGAACCCACGCCCGACGCTCCCTCCAGT | + |
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Preference number: 3 (lower is better) Translates to: QARLSPQMTLTD*GDEPTPDAPSS Trigger: ACTGGAGGGAGCGTCGGGCGTGGGTTCATCTCCCCAGTCAGTCAGAGTCATCTGTGGTGAGAGCCTGGCTTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR CCA 72 bp | ACATCGCTAGCTCACACCAAGGGCAGGGTCAAGGCTTaGGTTGTCAGCACTGGGAGCACTGTGGCTGCTCCT | + |
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Preference number: 3 (lower is better) Translates to: TSLAHTKGRVKA*VVSTGSTVAAP Trigger: AGGAGCAGCCACAGTGCTCCCAGTGCTGACAACCCAAGCCTTGACCCTGCCCTTGGTGTGAGCTAGCGATGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR-3UTR CAA 90 bp | GAACCCACGCCCGACGCTCCCTCCAGTGTTGGCCATCGTCTTATTGCTGAATTAGGGCAGGGTCAAGGCTaGGGTTGTCAGCACTGGGAG | + |
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Preference number: 3 (lower is better) Translates to: EPTPDAPSSVGHRLIAELGQGQG*GCQHWE Trigger: CTCCCAGTGCTGACAACCCAAGCCTTGACCCTGCCC...TAATTCAGCAATAAGACGATGGCCAACACTGGAGGGAGCGTCGGGCGTGGGTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR GCA 72 bp | GTGAGGGGTGAGCACAGGCTCAGCTTATGTGAGGGGTaGATCTGGGTCGTAATCTCCAACGTCCTGAGACAG | + |
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Preference number: 3 (lower is better) Translates to: VRGEHRLSLCEG*IWVVISNVLRQ Trigger: CTGTCTCAGGACGTTGGAGATTACGACCCAGATGCACCCCTCACATAAGCTGAGCCTGTGCTCACCCCTCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR TCA 72 bp | GCCAAAGCCATGATTGCCTGTGTCTCAGTTGGCCCCTaGCAAAGTGGAGAACAAGGCAAAAGCCGGGCAGAC | + |
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Preference number: 3 (lower is better) Translates to: AKAMIACVSVGP*QSGEQGKSRAD Trigger: GTCTGCCCGGCTTTTGCCTTGTTCTCCACTTTGTCAGGGGCCAACTGAGACACAGGCAATCATGGCTTTGGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR CCA 72 bp | CCCTGGCTGACTTGGAATTCACTTTGTAGACCAGGCTaGCCTCAAACTCAGAAATCCGCCTGCCTCTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: PWLTWNSLCRPG*PQTQKSACLCL Trigger: GAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAATTCCAAGTCAGCCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR GCA 72 bp | AGTGCACCACACCTAACACACGACAAAGGGCCTGGCTaGTCACAACCTACACACGAGTGTGGAGTCAGTTAC | + |
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Preference number: 3 (lower is better) Translates to: SAPHLTHDKGPG*SQPTHECGVSY Trigger: GTAACTGACTCCACACTCGTGTGTAGGTTGTGAGCAGCCAGGCCCTTTGTCGTGTGTTAGGTGTGGTGCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR GCA 72 bp | CCTCCCTGTACCCCAAGCAGCACTGGGGATACCAAGTaGACAGACCAAGTTCTAAACCCTCAGATGCAGTGT | + |
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Preference number: 3 (lower is better) Translates to: PPCTPSSTGDTK*TDQVLNPQMQC Trigger: ACACTGCATCTGAGGGTTTAGAACTTGGTCTGTGCACTTGGTATCCCCAGTGCTGCTTGGGGTACAGGGAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR CCA 72 bp | GGTGAGCACAGGCTCAGCTTATGTGAGGGGTGCATCTaGGTCGTAATCTCCAACGTCCTGAGACAGCAAACA | + |
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Preference number: 3 (lower is better) Translates to: GEHRLSLCEGCI*VVISNVLRQQT Trigger: TGTTTGCTGTCTCAGGACGTTGGAGATTACGACCCAGATGCACCCCTCACATAAGCTGAGCCTGTGCTCACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR CCA 72 bp | CATGATTGCCTGTGTCTCAGTTGGCCCCTGACAAAGTaGAGAACAAGGCAAAAGCCGGGCAGACATAGACAC | + |
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Preference number: 3 (lower is better) Translates to: HDCLCLSWPLTK*RTRQKPGRHRH Trigger: GTGTCTATGTCTGCCCGGCTTTTGCCTTGTTCTCCACTTTGTCAGGGGCCAACTGAGACACAGGCAATCATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGCTCAGGAGTCCATCTTACTACAGGAAGGCGAAGCCTCATCACCACCAGGACACAATTCTTTTTCTTaGGCAACATCGCTAGCTCAC | + |
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Preference number: 3 (lower is better) Translates to: TAQESILLQEGEASSPPGHNSFS*ATSLAH Trigger: GTGAGCTAGCGATGTTGCCAAAGAAAAAGAATTGTG...TCCTGGTGGTGATGAGGCTTCGCCTTCCTGTAGTAAGATGGACTCCTGAGCTGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR GCA 72 bp | ACTTGGAACGTCTACAGAAGCCACAATAAACTCAGATaGACACTCAGAACAGTCTCACCAACTGGTCGCCCA | + |
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Preference number: 3 (lower is better) Translates to: TWNVYRSHNKLR*TLRTVSPTGRP Trigger: TGGGCGACCAGTTGGTGAGACTGTTCTGAGTGTGCATCTGAGTTTATTGTGGCTTCTGTAGACGTTCCAAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR CCA 72 bp | TTCCTTCCCACATCGGTGAGAAAGGAAAAGACAACGTaGGAAAGTGAACATCCAGATACCCATCAACTCTTC | + |
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Preference number: 3 (lower is better) Translates to: FLPTSVRKEKTT*ESEHPDTHQLF Trigger: GAAGAGTTGATGGGTATCTGGATGTTCACTTTCCCACGTTGTCTTTTCCTTTCTCACCGATGTGGGAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR TCA 72 bp | CTTCCTTCCACCCAAAATGTCACTCCAAGTTCAAAGTaGACTAAAGTAGGTGTGGCAGAAAGTGCAATCGGA | + |
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Preference number: 3 (lower is better) Translates to: LPSTQNVTPSSK*TKVGVAESAIG Trigger: TCCGATTGCACTTTCTGCCACACCTACTTTAGTTCACTTTGAACTTGGAGTGACATTTTGGGTGGAAGGAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR GCA 72 bp | GCTTCCGGAAGGCAGAGCCTCCACCAATCATTATGCTaGTGTATAAATCATACAAAACAACGGAAACATGAT | + |
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Preference number: 3 (lower is better) Translates to: ASGRQSLHQSLC*CINHTKQRKHD Trigger: ATCATGTTTCCGTTGTTTTGTATGATTTATACAGCAGCATAATGATTGGTGGAGGCTCTGCCTTCCGGAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR-3UTR CAA 90 bp | CACCACCAGGACAACAAGTCTAACTTACCAGGCATGTACACACTTTATTTTACTTTGGCCATCGTCTTATaGCTGAATTACTCACAATTC | + |
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Preference number: 3 (lower is better) Translates to: HHQDNKSNLPGMYTLYFTLAIVL*LNYSQF Trigger: GAATTGTGAGTAATTCAGCAATAAGACGATGGCCAA...AGTAAAATAAAGTGTGTACATGCCTGGTAAGTTAGACTTGTTGTCCTGGTGGTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| 3UTR TCA 72 bp | GCAAATCTAACATTTTATTTCACATTCGTGTCATCTTaGCTTCTAACAGTTTCTCTGTCTGCCTATCCTGAC | + |
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Preference number: 3 (lower is better) Translates to: ANLTFYFTFVSS*LLTVSLSAYPD Trigger: GTCAGGATAGGCAGACAGAGAAACTGTTAGAAGTCAAGATGACACGAATGTGAAATAAAATGTTAGATTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR CCA 72 bp | ATATACAGCTGTTTACAACTTCAAACTAGTACAACTTaGAACGTCTACAGAAGCCACAATAAACTCAGATGC | + |
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Preference number: 3 (lower is better) Translates to: IYSCLQLQTSTT*NVYRSHNKLRC Trigger: GCATCTGAGTTTATTGTGGCTTCTGTAGACGTTCCAAGTTGTACTAGTTTGAAGTTGTAAACAGCTGTATAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| CDS-3UTR CCA 90 bp | GCTTGCATGCAGCAGGGCGCAGCTGGCCACTTCTGTGATTCCACTGTGACCAGGACGGCTCGATGGAACTaGTGCATGTCTTCCCCCGAC | + |
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Preference number: 4 (lower is better) Translates to: ACMQQGAAGHFCDSTVTRTARWN*CMSSPD Trigger: GTCGGGGGAAGACATGCACCAGTTCCATCGAGCCGT...CCTGGTCACAGTGGAATCACAGAAGTGGCCAGCTGCGCCCTGCTGCATGCAAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| 3UTR CAA 72 bp | AACATCGCTAGCTCACACCAAGGGCAGGGTCAAGGCTaGGGTTGTCAGCACTGGGAGCACTGTGGCTGCTCC | + |
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Preference number: 4 (lower is better) Translates to: NIASSHQGQGQG*GCQHWEHCGCS Trigger: GGAGCAGCCACAGTGCTCCCAGTGCTGACAACCCAAGCCTTGACCCTGCCCTTGGTGTGAGCTAGCGATGTT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| CDS-3UTR TCA 90 bp | CCAAGGGCAGGGTCAAGGCTTGGGTTGTCAGCACTGGGAGCACTGTGGCTGCTCCATGCTTCCTCTTCCTaGACCCTCCTGGTCCTTCTT | + |
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Preference number: 4 (lower is better) Translates to: PRAGSRLGLSALGALWLLHASSS*TLLVLL Trigger: AAGAAGGACCAGGAGGGTTCAGGAAGAGGAAGCATG...GAGCAGCCACAGTGCTCCCAGTGCTGACAACCCAAGCCTTGACCCTGCCCTTGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| CDS-3UTR TCA 90 bp | CTTGGGTTGTCAGCACTGGGAGCACTGTGGCTGCTCCTCTGGGGTCCCAGGACGGCAGGATCTTCTGTCTaGCACCATCCAGCTTACTTT | + |
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Preference number: 4 (lower is better) Translates to: LGLSALGALWLLLWGPRTAGSSV*HHPAYF Trigger: AAAGTAAGCTGGATGGTGTCAGACAGAAGATCCTGC...CGTCCTGGGACCCCAGAGGAGCAGCCACAGTGCTCCCAGTGCTGACAACCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| CDS-3UTR TCA 90 bp | TGGCTGCTCCTCTGGGGTCCCAGGACGGCTGGGGTAGACAAGTGCACCACACCTCATGTCTGTTTTAACTaGAAACACATCTGCCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: WLLLWGPRTAGVDKCTTPHVCFN*KHICQH Trigger: ATGCTGGCAGATGTGTTTTCAGTTAAAACAGACATG...AGGTGTGGTGCACTTGTCTACCCCAGCCGTCCTGGGACCCCAGAGGAGCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| CDS-3UTR GCA 90 bp | GTGAGGGGTGAGCACAGGCTCAGCTTATGTGAGGGGTGCATCTGGGTCGTAATCTGTGGGAAGGTGTCATaGTTCCTCTTCCTGAACCCT | + |
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Preference number: 4 (lower is better) Translates to: VRGEHRLSLCEGCIWVVICGKVS*FLFLNP Trigger: AGGGTTCAGGAAGAGGAAGCATGACACCTTCCCACA...GATTACGACCCAGATGCACCCCTCACATAAGCTGAGCCTGTGCTCACCCCTCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| CDS-3UTR GCA 90 bp | TGGCTGCTCCTCTGGGGTCCCAGGACGGCTGGGGTAGACAAGTGCACCACACCTTTTCCCACTGTCTTCTaGTGTAAATGTCAACTGCTT | + |
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Preference number: 4 (lower is better) Translates to: WLLLWGPRTAGVDKCTTPFPTVF*CKCQLL Trigger: AAGCAGTTGACATTTACAGCAGAAGACAGTGGGAAA...AGGTGTGGTGCACTTGTCTACCCCAGCCGTCCTGGGACCCCAGAGGAGCAGCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| CDS-3UTR GCA 90 bp | ACCAAGTGCACAGACCAAGTTCTAAACCCTCAGATGCAGTGTGCTGACTTCCTCGCTCGATGGAACTGGTaGATGTCTTCCCCCGACAGC | + |
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Preference number: 4 (lower is better) Translates to: TKCTDQVLNPQMQCADFLARWNW*MSSPDS Trigger: GCTGTCGGGGGAAGACATGCACCAGTTCCATCGAGC...GAGGAAGTCAGCACACTGCATCTGAGGGTTTAGAACTTGGTCTGTGCACTTGGT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
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| CDS-3UTR TCA 90 bp | CCCGACGCTCCCTCCAGTGTTGGCCATCGTCTTATTGCTGAATTACTCACAATTCCTGCTGAAATGATTTaGAGGCCAGCATCACCGGCG | + |
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Preference number: 4 (lower is better) Translates to: PDAPSSVGHRLIAELLTIPAEMI*RPASPA Trigger: CGCCGGTGATGCTGGCCTTCAAATCATTTCAGCAGG...AATTGTGAGTAATTCAGCAATAAGACGATGGCCAACACTGGAGGGAGCGTCGGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| CDS-3UTR TCA 90 bp | ACAGACCAAGTTCTAAACCCTCAGATGCAGTGTGCTGACTTCCTCTCTGTCACCCCTGCTGAAATGATTTaGAGGCCAGCATCACCGGCG | + |
|
Preference number: 4 (lower is better) Translates to: TDQVLNPQMQCADFLSVTPAEMI*RPASPA Trigger: CGCCGGTGATGCTGGCCTTCAAATCATTTCAGCAGG...GGTGACAGAGAGGAAGTCAGCACACTGCATCTGAGGGTTTAGAACTTGGTCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
||
| CDS-3UTR TCA 90 bp | ACAGCTCAGGAGTCCATCTTACTACAGGAAGGCGAAGCCTCATCACCACCAGGACAGCTCCTGCTGAAATaGTTTGAAGGCCAGCATCAC | + |
|
Preference number: 4 (lower is better) Translates to: TAQESILLQEGEASSPPGQLLLK*FEGQHH Trigger: GTGATGCTGGCCTTCAAATCATTTCAGCAGGAGCTG...TCCTGGTGGTGATGAGGCTTCGCCTTCCTGTAGTAAGATGGACTCCTGAGCTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR TCA 90 bp | ACCTGCTTTCTCCCCACTGTCTCTCTCCATGAACTCGAGGGGAGCTGCTTGCATGCAGGATCTTCTGTCTaGCACCATCCAGCTTACTTT | + |
|
Preference number: 4 (lower is better) Translates to: TCFLPTVSLHELEGSCLHAGSSV*HHPAYF Trigger: AAAGTAAGCTGGATGGTGTCAGACAGAAGATCCTGC...ATGCAAGCAGCTCCCCTCGAGTTCATGGAGAGAGACAGTGGGGAGAAAGCAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
||
| CDS-3UTR TCA 90 bp | CTGCTCCTCTGGGGTCCCAGGACGGCTGGGGTAGACAAGTGCACCACACCTAACTTCCATACTGATCAATaGACGAGTTTTGATGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: LLLWGPRTAGVDKCTTPNFHTDQ*TSFDEV Trigger: CACTTCATCAAAACTCGTTCATTGATCAGTATGGAA...GTTAGGTGTGGTGCACTTGTCTACCCCAGCCGTCCTGGGACCCCAGAGGAGCAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR TCA 90 bp | AGTCAGTTACTCAGCGTCACCAGTGATGACCAGTGTCAGCTCCTTCCTTCCCACGCCCAGTGTTGCCAATaGACGAGAACCCATCGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: SQLLSVTSDDQCQLLPSHAQCCQ*TRTHRK Trigger: TTTACGATGGGTTCTCGTTCATTGGCAACACTGGGC...GTGGGAAGGAAGGAGCTGACACTGGTCATCACTGGTGACGCTGAGTAACTGACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR GCA 90 bp | CCACACTTTTCCCTCCATAGACAGAATCACCCACTTAAGAGACTTCCTTCCACCGCTCGATGGAACTGGTaGATGTCTTCCCCCGACAGC | + |
|
Preference number: 4 (lower is better) Translates to: PHFSLHRQNHPLKRLPSTARWNW*MSSPDS Trigger: GCTGTCGGGGGAAGACATGCACCAGTTCCATCGAGC...GGTGGAAGGAAGTCTCTTAAGTGGGTGATTCTGTCTATGGAGGGAAAAGTGTGG 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR TCA 90 bp | GCTTGCATGCAGCAGGGCGCAGCTGGCCACTTCTGTGATTCCACTGTGACCAGGTTCCATACTGATCAATaGACGAGTTTTGATGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: ACMQQGAAGHFCDSTVTRFHTDQ*TSFDEV Trigger: CACTTCATCAAAACTCGTTCATTGATCAGTATGGAA...CCTGGTCACAGTGGAATCACAGAAGTGGCCAGCTGCGCCCTGCTGCATGCAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
||
| CDS-3UTR GCA 90 bp | GCTCAGGAGTCCATCTTACTACAGGAAGGCGAAGCCTCATCACCACCAGGACAAACATCTGCCAGCATGTaGTTAGGAATCTCAGAACCC | + |
|
Preference number: 4 (lower is better) Translates to: AQESILLQEGEASSPPGQTSASM*LGISEP Trigger: GGGTTCTGAGATTCCTAAGCACATGCTGGCAGATGT...TTGTCCTGGTGGTGATGAGGCTTCGCCTTCCTGTAGTAAGATGGACTCCTGAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR CCA 90 bp | TCCTCCCTGTACCCCAAGCAGCACTGGGGATACCAAGTGCACAGACCAAGTTCTTCTCCTTTGGTTATGTaGGAAGGTGTCATGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: SSLYPKQHWGYQVHRPSSSPLVM*EGVMLP Trigger: AGGAAGCATGACACCTTCCCACATAACCAAAGGAGA...AGAACTTGGTCTGTGCACTTGGTATCCCCAGTGCTGCTTGGGGTACAGGGAGGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
||
| CDS-3UTR CCA 90 bp | AGGAACGTAGGCACGCAGGAAGCTTCTCCACACTTTTCCCTCCATAGACAGAATTCTCCTTTGGTTATGTaGGAAGGTGTCATGCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RNVGTQEASPHFSLHRQNSPLVM*EGVMLP Trigger: AGGAAGCATGACACCTTCCCACATAACCAAAGGAGA...ATTCTGTCTATGGAGGGAAAAGTGTGGAGAAGCTTCCTGCGTGCCTACGTTCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR CCA 90 bp | GGAAGGCAGAGCCTCCACCAATCATTATGCTGCTGTATAAATCATACAAAACAACCGGCGAAGACAAACTaGCATCCTTCCCCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GRQSLHQSLCCCINHTKQPAKTN*HPSPLS Trigger: GGAGAGAGGGGAAGGATGCCAGTTTGTCTTCGCCGG...TTGTTTTGTATGATTTATACAGCAGCATAATGATTGGTGGAGGCTCTGCCTTCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
||
| CDS-3UTR CCA 90 bp | CACCACCAGGACAACAAGTCTAACTTACCAGGCATGTACACACTTTATTTTACTACGGCTCGATGGAACTaGTGCATGTCTTCCCCCGAC | + |
|
Preference number: 4 (lower is better) Translates to: HHQDNKSNLPGMYTLYFTTARWN*CMSSPD Trigger: GTCGGGGGAAGACATGCACCAGTTCCATCGAGCCGT...AGTAAAATAAAGTGTGTACATGCCTGGTAAGTTAGACTTGTTGTCCTGGTGGTG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR CCA 90 bp | AATTACTCACAATTCTTTTTCTTTGGCAACATCGCTAGCTCACACCAAGGGCAGCATATTTGTCGTGCCTaGCGTCCAGCTCCTGCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: NYSQFFFFGNIASSHQGQHICRA*RPAPAE Trigger: TTCAGCAGGAGCTGGACGCCAGGCACGACAAATATG...CTGCCCTTGGTGTGAGCTAGCGATGTTGCCAAAGAAAAAGAATTGTGAGTAATT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR TCA 90 bp | GGAAGGCAGAGCCTCCACCAATCATTATGCTGCTGTATAAATCATACAAAACAACATGCTTCCTCTTCCTaGACCCTCCTGGTCCTTCTT | + |
|
Preference number: 4 (lower is better) Translates to: GRQSLHQSLCCCINHTKQHASSS*TLLVLL Trigger: AAGAAGGACCAGGAGGGTTCAGGAAGAGGAAGCATG...TTGTTTTGTATGATTTATACAGCAGCATAATGATTGGTGGAGGCTCTGCCTTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
||
| CDS-3UTR CCA 90 bp | AATTACTCACAATTCTTTTTCTTTGGCAACATCGCTAGCTCACACCAAGGGCAGACCTGGCGTAAAAACTaGCTCACTTCAAAGGGGGTG | + |
|
Preference number: 4 (lower is better) Translates to: NYSQFFFFGNIASSHQGQTWRKN*LTSKGV Trigger: CACCCCCTTTGAAGTGAGCCAGTTTTTACGCCAGGT...CTGCCCTTGGTGTGAGCTAGCGATGTTGCCAAAGAAAAAGAATTGTGAGTAATT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 15 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR CCA 90 bp | ACAACAAGTCTAACTTACCAGGCATGTACACACTTTATTTTACTTTTGGTGAGACCGGCGAAGACAAACTaGCATCCTTCCCCTCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TTSLTYQACTHFILLLVRPAKTN*HPSPLS Trigger: GGAGAGAGGGGAAGGATGCCAGTTTGTCTTCGCCGG...TCTCACCAAAAGTAAAATAAAGTGTGTACATGCCTGGTAAGTTAGACTTGTTGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR GCA 90 bp | ACAACAAGTCTAACTTACCAGGCATGTACACACTTTATTTTACTTTTGGTGAGACCGCGGGAGGAGTCTTaGTCTCTTTCCCACTGTCTT | + |
|
Preference number: 4 (lower is better) Translates to: TTSLTYQACTHFILLLVRPREES*SLSHCL Trigger: AAGACAGTGGGAAAGAGAGCAAGACTCCTCCCGCGG...TCTCACCAAAAGTAAAATAAAGTGTGTACATGCCTGGTAAGTTAGACTTGTTGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR GCA 90 bp | ACAACAAGTCTAACTTACCAGGCATGTACACACTTTATTTTACTTTTGGTGAGATGTGGGAAGGTGTCATaGTTCCTCTTCCTGAACCCT | + |
|
Preference number: 4 (lower is better) Translates to: TTSLTYQACTHFILLLVRCGKVS*FLFLNP Trigger: AGGGTTCAGGAAGAGGAAGCATGACACCTTCCCACA...TCTCACCAAAAGTAAAATAAAGTGTGTACATGCCTGGTAAGTTAGACTTGTTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS CCA 90 bp | GCCTCCACGTATTCCTGCAGTCCTGTGGTGACGGCTCGATGGAACTaGTGCATGTCTTCCCCCGACAGCTCTTGGGCTACCTGCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: ASTYSCSPVVTARWN*CMSSPDSSWATCRI Trigger: GATCCTGCAGGTAGCCCAAGAGCTGTCGGGGGAAGACATGCACCAGTTCCATCGAGCCGTCACCACAGGACTGCAGGAATACGTGGAGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
||
| CDS CCA 90 bp | GAGACAGCCTCCACGTATTCCTGCAGTCCTGTGGTGACGGCTCGATaGAACTGGTGCATGTCTTCCCCCGACAGCTCTTGGGCTACCTGC | + |
|
Preference number: 5 (lower is better) Translates to: ETASTYSCSPVVTAR*NWCMSSPDSSWATC Trigger: GCAGGTAGCCCAAGAGCTGTCGGGGGAAGACATGCACCAGTTCCATCGAGCCGTCACCACAGGACTGCAGGAATACGTGGAGGCTGTCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
||
| CDS GCA 90 bp | TCCACGTATTCCTGCAGTCCTGTGGTGACGGCTCGATGGAACTGGTaGATGTCTTCCCCCGACAGCTCTTGGGCTACCTGCAGGATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: STYSCSPVVTARWNW*MSSPDSSWATCRIF Trigger: GAAGATCCTGCAGGTAGCCCAAGAGCTGTCGGGGGAAGACATGCACCAGTTCCATCGAGCCGTCACCACAGGACTGCAGGAATACGTGGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
||
| CDS CCA 90 bp | GTGACGGCTCGATGGAACTGGTGCATGTCTTCCCCCGACAGCTCTTaGGCTACCTGCAGGATCTTCTGTCTGACACCATCCAGCTTACTT | + |
|
Preference number: 5 (lower is better) Translates to: VTARWNWCMSSPDSS*ATCRIFCLTPSSLL Trigger: AAGTAAGCTGGATGGTGTCAGACAGAAGATCCTGCAGGTAGCCCAAGAGCTGTCGGGGGAAGACATGCACCAGTTCCATCGAGCCGTCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
||
| CDS-3UTR CAA 90 bp | GTGAGGGGTGAGCACAGGCTCAGCTTATGTGAGGGGTGCATCTGGGTCGTAATCCTTCCCCTCTCTCCTTaGGTTATGTGGGAAGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: VRGEHRLSLCEGCIWVVILPLSP*VMWEGV Trigger: GACACCTTCCCACATAACCAAAGGAGAGAGGGGAAG...GATTACGACCCAGATGCACCCCTCACATAAGCTGAGCCTGTGCTCACCCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
||
| CDS-3UTR CAA 90 bp | CAGGAGTCCATCTTACTACAGGAAGGCGAAGCCTCATCACCACCAGGACAACAATCCGCGGGAGGAGTCTaGCTCTCTTTCCCACTGTCT | + |
|
Preference number: 5 (lower is better) Translates to: QESILLQEGEASSPPGQQSAGGV*LSFPLS Trigger: AGACAGTGGGAAAGAGAGCAAGACTCCTCCCGCGGA...TTGTTGTCCTGGTGGTGATGAGGCTTCGCCTTCCTGTAGTAAGATGGACTCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR CAA 90 bp | GCAGGCCACGCTCAAGCCAGGCTCTCACCACAGATGACTCTGACTGACTGGGGAAGTTTTGATGAAGTGTaGAAAAGAGACAGCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: AGHAQARLSPQMTLTDWGSFDEV*KRDSLH Trigger: GTGGAGGCTGTCTCTTTTCAACACTTCATCAAAACT...TCCCCAGTCAGTCAGAGTCATCTGTGGTGAGAGCCTGGCTTGAGCGTGGCCTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS TCA 90 bp | GAGTCTCTCATATTTGTCGTGCCTGGCGTCCAGCTCCTGCTGAAATaGTTTGAAGGCCAGCATCACCGGCGAAGACAAACTGGCATCCTT | + |
|
Preference number: 5 (lower is better) Translates to: ESLIFVVPGVQLLLK*FEGQHHRRRQTGIL Trigger: AAGGATGCCAGTTTGTCTTCGCCGGTGATGCTGGCCTTCAAATCATTTCAGCAGGAGCTGGACGCCAGGCACGACAAATATGAGAGACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
||
| CDS TCA 90 bp | TTCACGAGTCTCTCATATTTGTCGTGCCTGGCGTCCAGCTCCTGCTaGAATGATTTGAAGGCCAGCATCACCGGCGAAGACAAACTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: FTSLSYLSCLASSSC*NDLKASITGEDKLA Trigger: TGCCAGTTTGTCTTCGCCGGTGATGCTGGCCTTCAAATCATTTCAGCAGGAGCTGGACGCCAGGCACGACAAATATGAGAGACTCGTGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
||
| CDS-3UTR CAA 90 bp | CCAAGGGCAGGGTCAAGGCTTGGGTTGTCAGCACTGGGAGCACTGTGGCTGCTCGTAAATGTCAACTGCTaGTTAATCTCTTCCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: PRAGSRLGLSALGALWLLVNVNC*LISSIL Trigger: CAGTATGGAAGAGATTAACAAGCAGTTGACATTTAC...GAGCAGCCACAGTGCTCCCAGTGCTGACAACCCAAGCCTTGACCCTGCCCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR CAA 90 bp | GCGCGGGAGTGTAAGAAACAACCTCCCTGTGGACAAACTTATATACAGCTGTTTTTCCCCCGACAGCTCTaGGGCTACCTGCAGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: ARECKKQPPCGQTYIQLFFPRQL*GYLQDL Trigger: AAGATCCTGCAGGTAGCCCAAGAGCTGTCGGGGGAA...AAACAGCTGTATATAAGTTTGTCCACAGGGAGGTTGTTTCTTACACTCCCGCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR CAA 90 bp | AGGAACGTAGGCACGCAGGAAGCTTCTCCACACTTTTCCCTCCATAGACAGAATCAAGCGTTCTCCACTTaGGCCAGGCTCTGTTTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RNVGTQEASPHFSLHRQNQAFST*ARLCFK Trigger: CTTGAAACAGAGCCTGGCCAAAGTGGAGAACGCTTG...ATTCTGTCTATGGAGGGAAAAGTGTGGAGAAGCTTCCTGCGTGCCTACGTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR CAA 90 bp | ACCTGCTTTCTCCCCACTGTCTCTCTCCATGAACTCGAGGGGAGCTGCTTGCATAGTTTTGATGAAGTGTaGAAAAGAGACAGCCTCCAC | + |
|
Preference number: 5 (lower is better) Translates to: TCFLPTVSLHELEGSCLHSFDEV*KRDSLH Trigger: GTGGAGGCTGTCTCTTTTCAACACTTCATCAAAACT...ATGCAAGCAGCTCCCCTCGAGTTCATGGAGAGAGACAGTGGGGAGAAAGCAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
||
| CDS-3UTR CAA 90 bp | GGAAGGCAGAGCCTCCACCAATCATTATGCTGCTGTATAAATCATACAAAACAATTCCCCCGACAGCTCTaGGGCTACCTGCAGGATCTT | + |
|
Preference number: 5 (lower is better) Translates to: GRQSLHQSLCCCINHTKQFPRQL*GYLQDL Trigger: AAGATCCTGCAGGTAGCCCAAGAGCTGTCGGGGGAA...TTGTTTTGTATGATTTATACAGCAGCATAATGATTGGTGGAGGCTCTGCCTTCC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
||
| CDS-3UTR CAA 90 bp | CACCACCAGGACAACAAGTCTAACTTACCAGGCATGTACACACTTTATTTTACTAACCAGCTGCTTCTCTaGTCCTTCCGCGGGAGGAGT | + |
|
Preference number: 5 (lower is better) Translates to: HHQDNKSNLPGMYTLYFTNQLLL*SFRGRS Trigger: ACTCCTCCCGCGGAAGGACAAGAGAAGCAGCTGGTT...AGTAAAATAAAGTGTGTACATGCCTGGTAAGTTAGACTTGTTGTCCTGGTGGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR CAA 90 bp | ACTCTTCAGGAAAACTGCTTCCTACGAATTCAAAACGACCTAAACTTGACCAGAACGAGTCTCTCATATTaGTCGTGCCTGGCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TLQENCFLRIQNDLNLTRTSLSY*SCLASS Trigger: GCTGGACGCCAGGCACGACAAATATGAGAGACTCGT...TCTGGTCAAGTTTAGGTCGTTTTGAATTCGTAGGAAGCAGTTTTCCTGAAGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS-3UTR CAA 90 bp | GGAAGGCAGAGCCTCCACCAATCATTATGCTGCTGTATAAATCATACAAAACAAACGAGTCTCTCATATTaGTCGTGCCTGGCGTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: GRQSLHQSLCCCINHTKQTSLSY*SCLASS Trigger: GCTGGACGCCAGGCACGACAAATATGAGAGACTCGT...TTGTTTTGTATGATTTATACAGCAGCATAATGATTGGTGGAGGCTCTGCCTTCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
||
| CDS-3UTR CAA 90 bp | CACCACCAGGACAACAAGTCTAACTTACCAGGCATGTACACACTTTATTTTACTCTTCCCCTCTCTCCTTaGGTTATGTGGGAAGGTGTC | + |
|
Preference number: 5 (lower is better) Translates to: HHQDNKSNLPGMYTLYFTLPLSP*VMWEGV Trigger: GACACCTTCCCACATAACCAAAGGAGAGAGGGGAAG...AGTAAAATAAAGTGTGTACATGCCTGGTAAGTTAGACTTGTTGTCCTGGTGGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS TCA 90 bp | TTAATCTCTTCCATACTGATCAATGAACGAGTTTTGATGAAGTGTTaGAAAGAGACAGCCTCCACGTATTCCTGCAGTCCTGTGGTGACG | + |
|
Preference number: 5 (lower is better) Translates to: LISSILINERVLMKC*KETASTYSCSPVVT Trigger: CGTCACCACAGGACTGCAGGAATACGTGGAGGCTGTCTCTTTTCAACACTTCATCAAAACTCGTTCATTGATCAGTATGGAAGAGATTAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
||
| CDS TCA 90 bp | TGCTGTAAATGTCAACTGCTTGTTAATCTCTTCCATACTGATCAATaGACGAGTTTTGATGAAGTGTTGAAAAGAGACAGCCTCCACGTA | + |
|
Preference number: 5 (lower is better) Translates to: CCKCQLLVNLFHTDQ*TSFDEVLKRDSLHV Trigger: TACGTGGAGGCTGTCTCTTTTCAACACTTCATCAAAACTCGTTCATTGATCAGTATGGAAGAGATTAACAAGCAGTTGACATTTACAGCA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
||
| CDS-3UTR CAA 90 bp | GCAAGCACTGCTTCATTAAAAACCTTTCTAAGTCAAACTCTTCCATCAAGTCCTGTAAATGTCAACTGCTaGTTAATCTCTTCCATACTG | + |
|
Preference number: 5 (lower is better) Translates to: ASTASLKTFLSQTLPSSPVNVNC*LISSIL Trigger: CAGTATGGAAGAGATTAACAAGCAGTTGACATTTAC...AGGACTTGATGGAAGAGTTTGACTTAGAAAGGTTTTTAATGAAGCAGTGCTTGC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000212603.2 |
||
| CDS-3UTR CAA 90 bp | ACAACAAGTCTAACTTACCAGGCATGTACACACTTTATTTTACTTTTGGTGAGATATGGAGAAGAAAAATaGTCCTCTTACTCTCCACAG | + |
|
Preference number: 5 (lower is better) Translates to: TTSLTYQACTHFILLLVRYGEEK*SSYSPQ Trigger: CTGTGGAGAGTAAGAGGACAATTTTTCTTCTCCATA...TCTCACCAAAAGTAAAATAAAGTGTGTACATGCCTGGTAAGTTAGACTTGTTGT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
||
| CDS GCA 72 bp | TCCTGCAGTCCTGTGGTGACGGCTCGATGGAACTGGTaGATGTCTTCCCCCGACAGCTCTTGGGCTACCTGC | + |
|
Preference number: 6 (lower is better) Translates to: SCSPVVTARWNW*MSSPDSSWATC Trigger: GCAGGTAGCCCAAGAGCTGTCGGGGGAAGACATGCACCAGTTCCATCGAGCCGTCACCACAGGACTGCAGGA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
||
| CDS TCA 72 bp | AAGAGACAGCCTCCACGTATTCCTGCAGTCCTGTGGTaGCGGCTCGATGGAACTGGTGCATGTCTTCCCCCG | + |
|
Preference number: 6 (lower is better) Translates to: KRQPPRIPAVLW*RLDGTGACLPP Trigger: CGGGGGAAGACATGCACCAGTTCCATCGAGCCGTCACCACAGGACTGCAGGAATACGTGGAGGCTGTCTCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
||
| CDS CCA 72 bp | TATTCCTGCAGTCCTGTGGTGACGGCTCGATGGAACTaGTGCATGTCTTCCCCCGACAGCTCTTGGGCTACC | + |
|
Preference number: 6 (lower is better) Translates to: YSCSPVVTARWN*CMSSPDSSWAT Trigger: GGTAGCCCAAGAGCTGTCGGGGGAAGACATGCACCAGTTCCATCGAGCCGTCACCACAGGACTGCAGGAATA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
||
| CDS CAA 90 bp | GGTGACGGCTCGATGGAACTGGTGCATGTCTTCCCCCGACAGCTCTaGGGCTACCTGCAGGATCTTCTGTCTGACACCATCCAGCTTACT | + |
|
Preference number: 6 (lower is better) Translates to: GDGSMELVHVFPRQL*GYLQDLLSDTIQLT Trigger: AGTAAGCTGGATGGTGTCAGACAGAAGATCCTGCAGGTAGCCCAAGAGCTGTCGGGGGAAGACATGCACCAGTTCCATCGAGCCGTCACC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
||
| CDS CCA 72 bp | CGATGGAACTGGTGCATGTCTTCCCCCGACAGCTCTTaGGCTACCTGCAGGATCTTCTGTCTGACACCATCC | + |
|
Preference number: 6 (lower is better) Translates to: RWNWCMSSPDSS*ATCRIFCLTPS Trigger: GGATGGTGTCAGACAGAAGATCCTGCAGGTAGCCCAAGAGCTGTCGGGGGAAGACATGCACCAGTTCCATCG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
||
| CDS CAA 72 bp | TCGATGGAACTGGTGCATGTCTTCCCCCGACAGCTCTaGGGCTACCTGCAGGATCTTCTGTCTGACACCATC | + |
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Preference number: 6 (lower is better) Translates to: SMELVHVFPRQL*GYLQDLLSDTI Trigger: GATGGTGTCAGACAGAAGATCCTGCAGGTAGCCCAAGAGCTGTCGGGGGAAGACATGCACCAGTTCCATCGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
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| CDS CAA 90 bp | CAGCATCACCGGCGAAGACAAACTGGCATCCTTCCCCTCTCTCCTTaGGTTATGTGGGAAGGTGTCATGCTTCCTCTTCCTGAACCCTCC | + |
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Preference number: 6 (lower is better) Translates to: QHHRRRQTGILPLSP*VMWEGVMLPLPEPS Trigger: GGAGGGTTCAGGAAGAGGAAGCATGACACCTTCCCACATAACCAAAGGAGAGAGGGGAAGGATGCCAGTTTGTCTTCGCCGGTGATGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
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| CDS CAA 90 bp | GTCAACAGGGGTGAGCTTCAGTCTCCATGTAACCAGCTGCTTCTCTaGTCCTTCCGCGGGAGGAGTCTTGCTCTCTTTCCCACTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: VNRGELQSPCNQLLL*SFRGRSLALFPTVF Trigger: GAAGACAGTGGGAAAGAGAGCAAGACTCCTCCCGCGGAAGGACAAGAGAAGCAGCTGGTTACATGGAGACTGAAGCTCACCCCTGTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| CDS TCA 72 bp | CTCTCATATTTGTCGTGCCTGGCGTCCAGCTCCTGCTaGAATGATTTGAAGGCCAGCATCACCGGCGAAGAC | + |
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Preference number: 6 (lower is better) Translates to: LSYLSCLASSSC*NDLKASITGED Trigger: GTCTTCGCCGGTGATGCTGGCCTTCAAATCATTTCAGCAGGAGCTGGACGCCAGGCACGACAAATATGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
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| CDS CAA 90 bp | CTCCATGTAACCAGCTGCTTCTCTTGTCCTTCCGCGGGAGGAGTCTaGCTCTCTTTCCCACTGTCTTCTGCTGTAAATGTCAACTGCTTG | + |
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Preference number: 6 (lower is better) Translates to: LHVTSCFSCPSAGGV*LSFPLSSAVNVNCL Trigger: CAAGCAGTTGACATTTACAGCAGAAGACAGTGGGAAAGAGAGCAAGACTCCTCCCGCGGAAGGACAAGAGAAGCAGCTGGTTACATGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000075896.7 |
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| CDS TCA 72 bp | ATATTTGTCGTGCCTGGCGTCCAGCTCCTGCTGAAATaGTTTGAAGGCCAGCATCACCGGCGAAGACAAACT | + |
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Preference number: 6 (lower is better) Translates to: IFVVPGVQLLLK*FEGQHHRRRQT Trigger: AGTTTGTCTTCGCCGGTGATGCTGGCCTTCAAATCATTTCAGCAGGAGCTGGACGCCAGGCACGACAAATAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
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| CDS TCA 72 bp | CAGGATCTTCTGTCTGACACCATCCAGCTTACTTTCTaGTTCAGTCAGTATCTCCTCCATATCAGGAGCACT | + |
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Preference number: 6 (lower is better) Translates to: QDLLSDTIQLTF*FSQYLLHIRST Trigger: AGTGCTCCTGATATGGAGGAGATACTGACTGAATCAGAAAGTAAGCTGGATGGTGTCAGACAGAAGATCCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
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| CDS GCA 72 bp | CTCTCTTTCCCACTGTCTTCTGCTGTAAATGTCAACTaGTTGTTAATCTCTTCCATACTGATCAATGAACGA | + |
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Preference number: 6 (lower is better) Translates to: LSFPLSSAVNVN*LLISSILINER Trigger: TCGTTCATTGATCAGTATGGAAGAGATTAACAAGCAGTTGACATTTACAGCAGAAGACAGTGGGAAAGAGAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
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| CDS CAA 72 bp | TCTTTCCCACTGTCTTCTGCTGTAAATGTCAACTGCTaGTTAATCTCTTCCATACTGATCAATGAACGAGTT | + |
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Preference number: 6 (lower is better) Translates to: SFPLSSAVNVNC*LISSILINERV Trigger: AACTCGTTCATTGATCAGTATGGAAGAGATTAACAAGCAGTTGACATTTACAGCAGAAGACAGTGGGAAAGA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
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| CDS TCA 72 bp | TGTCAACTGCTTGTTAATCTCTTCCATACTGATCAATaGACGAGTTTTGATGAAGTGTTGAAAAGAGACAGC | + |
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Preference number: 6 (lower is better) Translates to: CQLLVNLFHTDQ*TSFDEVLKRDS Trigger: GCTGTCTCTTTTCAACACTTCATCAAAACTCGTTCATTGATCAGTATGGAAGAGATTAACAAGCAGTTGACA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000075896.7 ENSMUST00000212603.2 |
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