Pregenerated sensors for TSN (Mus musculus)
Ensembl gene IDs: ENSMUSG00000026374Ensembl transcript IDs: ENSMUST00000027623.9
Found 160 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGCAGAGGGGATGCACTCACCAGGAGGGACTGAAGCTAGCAGTTaGTGCCAGAGATGCCTAAGGGTCTTCCACCTTAGTCAGCCCTTC | + |
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Preference number: 1 (lower is better) Translates to: PAEGMHSPGGTEASS*CQRCLRVFHLSQPF Trigger: GAAGGGCTGACTAAGGTGGAAGACCCTTAGGCATCTCTGGCAGCAACTGCTAGCTTCAGTCCCTCCTGGTGAGTGCATCCCCTCTGCAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | GCTGCTCACAGGCTGAGGCAAGAGGAGAGCTTCAGCCCAGGAGGTTaGGACCAGCCTAGACAACACTACAGGCAGGACATTACAACCTCT | + |
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Preference number: 1 (lower is better) Translates to: AAHRLRQEESFSPGG*DQPRQHYRQDITTS Trigger: AGAGGTTGTAATGTCCTGCCTGTAGTGTTGTCTAGGCTGGTCTCAACCTCCTGGGCTGAAGCTCTCCTCTTGCCTCAGCCTGTGAGCAGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR GCA 90 bp | GGCAGAAAGGCAGCTGAGCACCAGCATGGACCCATTTCTATCTCCTaGCTGGGAATGAGATGGGAGCAGCTGCTTCAAGCTCCTAACACT | + |
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Preference number: 1 (lower is better) Translates to: GRKAAEHQHGPISIS*LGMRWEQLLQAPNT Trigger: AGTGTTAGGAGCTTGAAGCAGCTGCTCCCATCTCATTCCCAGGCAGGAGATAGAAATGGGTCCATGCTGGTGCTCAGCTGCCTTTCTGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CCA 90 bp | GAAGCCTTGAATTTGCCAATCTCCTGCCTCAGCCTCCTGTGTACCTaGGAGCACAAGCCTGCACTTTCAGGCCCCACTTTCCAGTTAGTC | + |
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Preference number: 1 (lower is better) Translates to: EALNLPISCLSLLCT*EHKPALSGPTFQLV Trigger: GACTAACTGGAAAGTGGGGCCTGAAAGTGCAGGCTTGTGCTCCCAGGTACACAGGAGGCTGAGGCAGGAGATTGGCAAATTCAAGGCTTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | TTGTCACAGGATCTCACTCAGTTAGACAGGCTACCCCTGAAGCCTTaGATTTGCCAATCTCCTGCCTCAGCCTCCTGTGTACCTGGGAGC | + |
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Preference number: 1 (lower is better) Translates to: LSQDLTQLDRLPLKP*ICQSPASASCVPGS Trigger: GCTCCCAGGTACACAGGAGGCTGAGGCAGGAGATTGGCAAATTCAAGGCTTCAGGGGTAGCCTGTCTAACTGAGTGAGATCCTGTGACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR GCA 90 bp | TCAGTTAGACAGGCTACCCCTGAAGCCTTGAATTTGCCAATCTCCTaGCTCAGCCTCCTGTGTACCTGGGAGCACAAGCCTGCACTTTCA | + |
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Preference number: 1 (lower is better) Translates to: SVRQATPEALNLPIS*LSLLCTWEHKPALS Trigger: TGAAAGTGCAGGCTTGTGCTCCCAGGTACACAGGAGGCTGAGGCAGGAGATTGGCAAATTCAAGGCTTCAGGGGTAGCCTGTCTAACTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR GCA 90 bp | TATGGTTTTATCAGCCAGCTTTCTTACAGACCACCAGCCCAGGGATaGCCCCACCACAGTGGGCTGGACCCTCCCACATCAATCACTAAT | + |
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Preference number: 1 (lower is better) Translates to: YGFISQLSYRPPAQG*PHHSGLDPPTSITN Trigger: ATTAGTGATTGATGTGGGAGGGTCCAGCCCACTGTGGTGGGGGCATCCCTGGGCTGGTGGTCTGTAAGAAAGCTGGCTGATAAAACCATA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | GCAGGAGCTGACGCAGAGGCCATGGAGAGGTGCTGCTTACTGGCTTaGTTGTTATGGTTTTATCAGCCAGCTTTCTTACAGACCACCAGC | + |
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Preference number: 1 (lower is better) Translates to: AGADAEAMERCCLLA*LLWFYQPAFLQTTS Trigger: GCTGGTGGTCTGTAAGAAAGCTGGCTGATAAAACCATAACAATCAAGCCAGTAAGCAGCACCTCTCCATGGCCTCTGCGTCAGCTCCTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | ATTCAGGCTGGAACTCAATTAGTGCAAGAACCTGGAGGCAGGAGCTaGCGCAGAGGCCATGGAGAGGTGCTGCTTACTGGCTTGATTGTT | + |
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Preference number: 1 (lower is better) Translates to: IQAGTQLVQEPGGRS*RRGHGEVLLTGLIV Trigger: AACAATCAAGCCAGTAAGCAGCACCTCTCCATGGCCTCTGCGTCAGCTCCTGCCTCCAGGTTCTTGCACTAATTGAGTTCCAGCCTGAAT 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR GCA 90 bp | ATGCACTCACCAGGAGGGACTGAAGCTAGCAGTTGCTGCCAGAGATaGCTAAGGGTCTTCCACCTTAGTCAGCCCTTCCAGAAATACTCT | + |
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Preference number: 1 (lower is better) Translates to: MHSPGGTEASSCCQR*LRVFHLSQPFQKYS Trigger: AGAGTATTTCTGGAAGGGCTGACTAAGGTGGAAGACCCTTAGGCATCTCTGGCAGCAACTGCTAGCTTCAGTCCCTCCTGGTGAGTGCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CCA 90 bp | ACCTGTAATTCATTAGGTAGCCTAGACAGGCTACCAGGTGAGCCCTaGGGAACCAATCCCCGCCTCCTTGGCACTGGTATTGTAAGTACA | + |
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Preference number: 1 (lower is better) Translates to: TCNSLGSLDRLPGEP*GTNPRLLGTGIVST Trigger: TGTACTTACAATACCAGTGCCAAGGAGGCGGGGATTGGTTCCCCAGGGCTCACCTGGTAGCCTGTCTAGGCTACCTAATGAATTACAGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR GCA 90 bp | CACTTTCAAGAGTCTAATCCTGTACTCAGGAAACGGAAACAGAGGTaGGAGTTCCAGGCCAGCCTGGACTACCAGCAAAACCCTGTCTCA | + |
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Preference number: 1 (lower is better) Translates to: HFQESNPVLRKRKQR*EFQASLDYQQNPVS Trigger: TGAGACAGGGTTTTGCTGGTAGTCCAGGCTGGCCTGGAACTCGCACCTCTGTTTCCGTTTCCTGAGTACAGGATTAGACTCTTGAAAGTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CCA 90 bp | AGCTCCTCTCCAAGCCAAGAAGTGCATACAGCTCAAAGTGTTAGCTaGAGTGTACCTCATCAGGCAGAGTGCTCAGCTACCACGGACAAA | + |
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Preference number: 1 (lower is better) Translates to: SSSPSQEVHTAQSVS*SVPHQAECSATTDK Trigger: TTTGTCCGTGGTAGCTGAGCACTCTGCCTGATGAGGTACACTCCAGCTAACACTTTGAGCTGTATGCACTTCTTGGCTTGGAGAGGAGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CCA 90 bp | TCAATTAGTGCAAGAACCTGGAGGCAGGAGCTGACGCAGAGGCCATaGAGAGGTGCTGCTTACTGGCTTGATTGTTATGGTTTTATCAGC | + |
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Preference number: 1 (lower is better) Translates to: SISARTWRQELTQRP*RGAAYWLDCYGFIS Trigger: GCTGATAAAACCATAACAATCAAGCCAGTAAGCAGCACCTCTCCATGGCCTCTGCGTCAGCTCCTGCCTCCAGGTTCTTGCACTAATTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | TCGATCATGCAGACAGTATCTGCATTTACATCAAAGCCCTGGGAGTaGCTAGTGTCTTGGTTGGTGTCACCCTTACACAACAGCTCAGGC | + |
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Preference number: 1 (lower is better) Translates to: SIMQTVSAFTSKPWE*LVSWLVSPLHNSSG Trigger: GCCTGAGCTGTTGTGTAAGGGTGACACCAACCAAGACACTAGTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTCTGCATGATCGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | TCAGTGGGCTCTGATATTAGACTGTATAAAAGGCAGAAAGGCAGCTaGGCACCAGCATGGACCCATTTCTATCTCCTGCCTGGGAATGAG | + |
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Preference number: 1 (lower is better) Translates to: SVGSDIRLYKRQKGS*APAWTHFYLLPGNE Trigger: CTCATTCCCAGGCAGGAGATAGAAATGGGTCCATGCTGGTGCTCAGCTGCCTTTCTGCCTTTTATACAGTCTAATATCAGAGCCCACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CCA 90 bp | AGTGGTAATGCAGCCACAGTCAACAAGAACTCAGAATTATCCAAATaGGAGACCGCCACACCAAGGACTGAAATCCCACTCAGCAAACGT | + |
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Preference number: 1 (lower is better) Translates to: SGNAATVNKNSELSK*ETATPRTEIPLSKR Trigger: ACGTTTGCTGAGTGGGATTTCAGTCCTTGGTGTGGCGGTCTCCCATTTGGATAATTCTGAGTTCTTGTTGACTGTGGCTGCATTACCACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | CACAACGCTTTTCCAGAGGCTCTTTCTACCTTGACCTTGCTGGGTTaGACTGTACAGTTTCATCTGCTCTGTTTTAGTAGCAGGGACAGA | + |
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Preference number: 1 (lower is better) Translates to: HNAFPEALSTLTLLG*TVQFHLLCFSSRDR Trigger: TCTGTCCCTGCTACTAAAACAGAGCAGATGAAACTGTACAGTTCAACCCAGCAAGGTCAAGGTAGAAAGAGCCTCTGGAAAAGCGTTGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR GCA 90 bp | TGTTTCACAACTTACTCAAGGAAAGCTCCTCTCCAAGCCAAGAAGTaGATACAGCTCAAAGTGTTAGCTGGAGTGTACCTCATCAGGCAG | + |
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Preference number: 1 (lower is better) Translates to: CFTTYSRKAPLQAKK*IQLKVLAGVYLIRQ Trigger: CTGCCTGATGAGGTACACTCCAGCTAACACTTTGAGCTGTATGCACTTCTTGGCTTGGAGAGGAGCTTTCCTTGAGTAAGTTGTGAAACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CCA 90 bp | ACTCAGAAATCCACCTGCCTCTACCAAGTGCTGGAATTAAAGGTGTaGGCCACTACTGGCCAGCAGAACATGAACAATTTGATTCTCCAT | + |
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Preference number: 1 (lower is better) Translates to: TQKSTCLYQVLELKV*ATTGQQNMNNLILH Trigger: ATGGAGAATCAAATTGTTCATGTTCTGCTGGCCAGTAGTGGCCCACACCTTTAATTCCAGCACTTGGTAGAGGCAGGTGGATTTCTGAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CCA 90 bp | TACATGTGTGAGAGCATGCCGGCTCTTTTGCATTCCTGGACTTCCTaGCATTATCTTAACTGCTTCAAACTTCGGAAGATGGAGTCCTCA | + |
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Preference number: 1 (lower is better) Translates to: YMCESMPALLHSWTS*HYLNCFKLRKMESS Trigger: TGAGGACTCCATCTTCCGAAGTTTGAAGCAGTTAAGATAATGCCAGGAAGTCCAGGAATGCAAAAGAGCCGGCATGCTCTCACACATGTA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | AGAACCCACAAGAACAGGCAAGAGCCTGTGAAACTACCATGCAACTaGAAAGCCTTCTACCTTCCCAGACACTTTCAAGAGTCTAATCCT | + |
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Preference number: 1 (lower is better) Translates to: RTHKNRQEPVKLPCN*KAFYLPRHFQESNP Trigger: AGGATTAGACTCTTGAAAGTGTCTGGGAAGGTAGAAGGCTTTTCAGTTGCATGGTAGTTTCACAGGCTCTTGCCTGTTCTTGTGGGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | CACTGCATGAATAAAATCAATTTAAAGGCAGTTGAGCCACCAGACTaGCATGGGTGCTGGGAACCCAACTCAGAGCCTCTGAAAGCTATA | + |
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Preference number: 1 (lower is better) Translates to: HCMNKINLKAVEPPD*HGCWEPNSEPLKAI Trigger: TATAGCTTTCAGAGGCTCTGAGTTGGGTTCCCAGCACCCATGTCAGTCTGGTGGCTCAACTGCCTTTAAATTGATTTTATTCATGCAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | CCAATACTGATTAAACCAACCATGCTGGTAAAAGCCTGGAATCCCTaGGCTAGGGAGGTGGAGGCAATTAGGAATTGGAAAAACATCCAG | + |
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Preference number: 1 (lower is better) Translates to: PILIKPTMLVKAWNP*AREVEAIRNWKNIQ Trigger: CTGGATGTTTTTCCAATTCCTAATTGCCTCCACCTCCCTAGCTCAGGGATTCCAGGCTTTTACCAGCATGGTTGGTTTAATCAGTATTGG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | AATGGCAAAAGCACTGCTCAGATGGTAGCTGCAGACGTGTTTCTATaGACTAGCTTCCTTTGTTTAACAGAAAGAGAGCAGCTGCTGCTG | + |
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Preference number: 1 (lower is better) Translates to: NGKSTAQMVAADVFL*TSFLCLTEREQLLL Trigger: CAGCAGCAGCTGCTCTCTTTCTGTTAAACAAAGGAAGCTAGTTCATAGAAACACGTCTGCAGCTACCATCTGAGCAGTGCTTTTGCCATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | CCAACACAAGACATCACAACGCTTTTCCAGAGGCTCTTTCTACCTTaGCCTTGCTGGGTTGAACTGTACAGTTTCATCTGCTCTGTTTTA | + |
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Preference number: 1 (lower is better) Translates to: PTQDITTLFQRLFLP*PCWVELYSFICSVL Trigger: TAAAACAGAGCAGATGAAACTGTACAGTTCAACCCAGCAAGGTCAAGGTAGAAAGAGCCTCTGGAAAAGCGTTGTGATGTCTTGTGTTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | GAACCCAACTCAGAGCCTCTGAAAGCTATACATGCTCTTAACTGCTaGGCCATCTCTCCAGCTGCCCTACCTAATTTTCTAAAATTGGAA | + |
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Preference number: 1 (lower is better) Translates to: EPNSEPLKAIHALNC*AISPAALPNFLKLE Trigger: TTCCAATTTTAGAAAATTAGGTAGGGCAGCTGGAGAGATGGCTCAGCAGTTAAGAGCATGTATAGCTTTCAGAGGCTCTGAGTTGGGTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | AAACCAACACACACACACACAGAACACAGTGTTCTCACAGAGCAGTaGGTGGTAATGCAGCCACAGTCAACAAGAACTCAGAATTATCCA | + |
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Preference number: 1 (lower is better) Translates to: KPTHTHTEHSVLTEQ*VVMQPQSTRTQNYP Trigger: TGGATAATTCTGAGTTCTTGTTGACTGTGGCTGCATTACCACTCACTGCTCTGTGAGAACACTGTGTTCTGTGTGTGTGTGTGTTGGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR GCA 90 bp | AACACCTTTAATTTCTTCATGGAGGTCGATCATGCAGACAGTATCTaGATTTACATCAAAGCCCTGGGAGTGACTAGTGTCTTGGTTGGT | + |
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Preference number: 1 (lower is better) Translates to: NTFNFFMEVDHADSI*IYIKALGVTSVLVG Trigger: ACCAACCAAGACACTAGTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTCTGCATGATCGACCTCCATGAAGAAATTAAAGGTGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CCA 90 bp | TTCTTCCATTGTGTGGGAATAAGCCTTCCACTGTTCTGTGTGGTGTaGTACTCCATACCTGTGAGACATTTATTCATTCAGTGGGCAAAT | + |
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Preference number: 1 (lower is better) Translates to: FFHCVGISLPLFCVV*YSIPVRHLFIQWAN Trigger: ATTTGCCCACTGAATGAATAAATGTCTCACAGGTATGGAGTACCACACCACACAGAACAGTGGAAGGCTTATTCCCACACAATGGAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CCA 90 bp | GTCAACCATTTTATTCTCACACTGCATCCAGGCTATAGCTGGAAATaGAGGACTAATCTGGACCTAGAAAACATCATTGTTTACTTGTGG | + |
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Preference number: 1 (lower is better) Translates to: VNHFILTLHPGYSWK*RTNLDLENIIVYLW Trigger: CCACAAGTAAACAATGATGTTTTCTAGGTCCAGATTAGTCCTCCATTTCCAGCTATAGCCTGGATGCAGTGTGAGAATAAAATGGTTGAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | GAGACATTTATTCATTCAGTGGGCAAATGTTTAACAGCTACTGTGTaGACAAGAGAACGTCCTCAGCCTCTTCTGATAGAAGCAAAAACT | + |
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Preference number: 1 (lower is better) Translates to: ETFIHSVGKCLTATV*TRERPQPLLIEAKT Trigger: AGTTTTTGCTTCTATCAGAAGAGGCTGAGGACGTTCTCTTGTTCACACAGTAGCTGTTAAACATTTGCCCACTGAATGAATAAATGTCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR GCA 90 bp | AATAATTTCAGTTCTACCCCAAGAATGGCCACATATGAATTCTTATaGGATCTGAAAAGGAGAGGGCATAGAGGAGCCCAAAGTTTACAT | + |
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Preference number: 1 (lower is better) Translates to: NNFSSTPRMATYEFL*DLKRRGHRGAQSLH Trigger: ATGTAAACTTTGGGCTCCTCTATGCCCTCTCCTTTTCAGATCGCATAAGAATTCATATGTGGCCATTCTTGGGGTAGAACTGAAATTATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR GCA 90 bp | TTCAACTCACTTACAAGACTTAAGATGGGCAAAATAAAGTTCCCTTaGTTGTCAACCATTTTATTCTCACACTGCATCCAGGCTATAGCT | + |
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Preference number: 1 (lower is better) Translates to: FNSLTRLKMGKIKFP*LSTILFSHCIQAIA Trigger: AGCTATAGCCTGGATGCAGTGTGAGAATAAAATGGTTGACAAGCAAGGGAACTTTATTTTGCCCATCTTAAGTCTTGTAAGTGAGTTGAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR TCA 90 bp | CAAGCTGACATAAAATTACCAATAGCACTCATTCATTGTTTTAGTTaGTGGTTGAATCTCTTACCTGTTTACATATTGTTTCAGCGCCCC | + |
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Preference number: 1 (lower is better) Translates to: QADIKLPIALIHCFS*WLNLLPVYILFQRP Trigger: GGGGCGCTGAAACAATATGTAAACAGGTAAGAGATTCAACCATCAACTAAAACAATGAATGAGTGCTATTGGTAATTTTATGTCAGCTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CCA 90 bp | AAATGGAGGACTAATCTGGACCTAGAAAACATCATTGTTTACTTGTaGGAGAAATTACAAACAAGACAACAAACCTGTCAGTCAGTACAT | + |
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Preference number: 1 (lower is better) Translates to: KWRTNLDLENIIVYL*EKLQTRQQTCQSVH Trigger: ATGTACTGACTGACAGGTTTGTTGTCTTGTTTGTAATTTCTCCCACAAGTAAACAATGATGTTTTCTAGGTCCAGATTAGTCCTCCATTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR-3UTR TCA 90 bp | GACAGGCTACCAGGTGAGCCCTGGGGAACCAATCCCCGCCTCCTTGGCACTGGTTCAAAGCCCTGGGAGTaGCTAGTGTCTTGGTTGGTG | + |
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Preference number: 2 (lower is better) Translates to: DRLPGEPWGTNPRLLGTGSKPWE*LVSWLV Trigger: CACCAACCAAGACACTAGTCACTCCCAGGGCTTTGA...ACCAGTGCCAAGGAGGCGGGGATTGGTTCCCCAGGGCTCACCTGGTAGCCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR-3UTR TCA 90 bp | GACAGGCTACCAGGTGAGCCCTGGGGAACCAATCCCCGCCTCCTTGGCACTGGTTGTCAGATTTGGAATTaGGGCCCAGCTAAAAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: DRLPGEPWGTNPRLLGTGCQIWN*GPAKRG Trigger: TCCCCTTTTAGCTGGGCCTCAATTCCAAATCTGACA...ACCAGTGCCAAGGAGGCGGGGATTGGTTCCCCAGGGCTCACCTGGTAGCCTGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR-3UTR TCA 90 bp | GACAGGCTACCAGGTGAGCCCTGGGGAACCAATCCCCGCCTCCTTGGCACTGGTTCTAACTTACATGTGTaGGAGCATGCCGGCTCTTTT | + |
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Preference number: 2 (lower is better) Translates to: DRLPGEPWGTNPRLLGTGSNLHV*EHAGSF Trigger: AAAAGAGCCGGCATGCTCTCACACATGTAAGTTAGA...ACCAGTGCCAAGGAGGCGGGGATTGGTTCCCCAGGGCTCACCTGGTAGCCTGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR-3UTR GCA 90 bp | CATGCAGACAGTATCTGCATTTACATCAAAGCCCTGGGAGTGACTAGTGTCTTGGCCCTCCCTGGCAACTaGGGCGCCAGCAAGGCCAGC | + |
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Preference number: 2 (lower is better) Translates to: HADSICIYIKALGVTSVLALPGN*GASKAS Trigger: GCTGGCCTTGCTGGCGCCGCAGTTGCCAGGGAGGGC...CAAGACACTAGTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTCTGCATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR-3UTR GCA 90 bp | GGGAATGGCTCAGGCGGTAAAGTGCTTGAGGCACAAACAGGACCAGAGTTTGAATTAGAGTCAGCCTCCTaGCACCCCGCTCGCTGCACA | + |
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Preference number: 2 (lower is better) Translates to: GNGSGGKVLEAQTGPEFELESAS*HPARCT Trigger: TGTGCAGCGAGCGGGGTGGCAGGAGGCTGACTCTAA...TTCAAACTCTGGTCCTGTTTGTGCCTCAAGCACTTTACCGCCTGAGCCATTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CAA 90 bp | ACAGGATCTCACTCAGTTAGACAGGCTACCCCTGAAGCCTTGAATTaGCCAATCTCCTGCCTCAGCCTCCTGTGTACCTGGGAGCACAAG | + |
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Preference number: 2 (lower is better) Translates to: TGSHSVRQATPEALN*PISCLSLLCTWEHK Trigger: CTTGTGCTCCCAGGTACACAGGAGGCTGAGGCAGGAGATTGGCAAATTCAAGGCTTCAGGGGTAGCCTGTCTAACTGAGTGAGATCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR-3UTR TCA 90 bp | GGAGGTCGATCATGCAGACAGTATCTGCATTTACATCAAAGCCCTGGGAGTGACTACAGGAAGAGGCACTaGGCTAGCCCTCCCTGGCAA | + |
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Preference number: 2 (lower is better) Translates to: GGRSCRQYLHLHQSPGSDYRKRH*ASPPWQ Trigger: TTGCCAGGGAGGGCTAGCTCAGTGCCTCTTCCTGTA...GTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTCTGCATGATCGACCTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR-3UTR TCA 90 bp | GGGAATGGCTCAGGCGGTAAAGTGCTTGAGGCACAAACAGGACCAGAGTTTGAATGTAAGACTGGCCTCTaGGCAGGGCTTGTAGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: GNGSGGKVLEAQTGPEFECKTGL*AGLVGV Trigger: AACCCCTACAAGCCCTGCTCAGAGGCCAGTCTTACA...TTCAAACTCTGGTCCTGTTTGTGCCTCAAGCACTTTACCGCCTGAGCCATTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR-3UTR CCA 90 bp | GACAGGCTACCAGGTGAGCCCTGGGGAACCAATCCCCGCCTCCTTGGCACTGGTAAGGTATGCAGATACTaGGAACTCATAGTGGTTTTT | + |
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Preference number: 2 (lower is better) Translates to: DRLPGEPWGTNPRLLGTGKVCRY*ELIVVF Trigger: AAAAACCACTATGAGTTCCCAGTATCTGCATACCTT...ACCAGTGCCAAGGAGGCGGGGATTGGTTCCCCAGGGCTCACCTGGTAGCCTGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR-3UTR CCA 90 bp | GGGAATGGCTCAGGCGGTAAAGTGCTTGAGGCACAAACAGGACCAGAGTTTGAAGGTGTGGGCCACTACTaGCCAGCAGAACATGAACAA | + |
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Preference number: 2 (lower is better) Translates to: GNGSGGKVLEAQTGPEFEGVGHY*PAEHEQ Trigger: TTGTTCATGTTCTGCTGGCCAGTAGTGGCCCACACC...TTCAAACTCTGGTCCTGTTTGTGCCTCAAGCACTTTACCGCCTGAGCCATTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR-3UTR TCA 90 bp | ACGTCCTCAGCCTCTTCTGATAGAAGCAAAAACTACAGGACTATCAGACAGGAGCAGCTGCTCACAGGCTaGGGCAAGAGGAGAGCTTCA | + |
|
Preference number: 2 (lower is better) Translates to: TSSASSDRSKNYRTIRQEQLLTG*GKRRAS Trigger: TGAAGCTCTCCTCTTGCCTCAGCCTGTGAGCAGCTG...CTCCTGTCTGATAGTCCTGTAGTTTTTGCTTCTATCAGAAGAGGCTGAGGACGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGAATGGCTCAGGCGGTAAAGTGCTTGAGGCACAAACAGGACCAGAGTTTGAATATGTATGGTGGCAATaGCCTAGAGTCCCAGCTGCT | + |
|
Preference number: 2 (lower is better) Translates to: GNGSGGKVLEAQTGPEFEYVWWQ*PRVPAA Trigger: AGCAGCTGGGACTCTAGGTCATTGCCACCATACATA...TTCAAACTCTGGTCCTGTTTGTGCCTCAAGCACTTTACCGCCTGAGCCATTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTACTCAAGGAAAGCTCCTCTCCAAGCCAAGAAGTGCATACAGCTCAAAGTGTAAAGCCTGGAATCCCTaGGCTAGGGAGGTGGAGGCA | + |
|
Preference number: 2 (lower is better) Translates to: LTQGKLLSKPRSAYSSKCKAWNP*AREVEA Trigger: TGCCTCCACCTCCCTAGCTCAGGGATTCCAGGCTTT...ACACTTTGAGCTGTATGCACTTCTTGGCTTGGAGAGGAGCTTTCCTTGAGTAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR CCA 90 bp | GGAGGTCGATCATGCAGACAGTATCTGCATTTACATCAAAGCCCTGGGAGTGACCTGGAATTAAAGGTGTaGGCCACTACTGGCCAGCAG | + |
|
Preference number: 2 (lower is better) Translates to: GGRSCRQYLHLHQSPGSDLELKV*ATTGQQ Trigger: CTGCTGGCCAGTAGTGGCCCACACCTTTAATTCCAG...GTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTCTGCATGATCGACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR CCA 90 bp | ACGTCCTCAGCCTCTTCTGATAGAAGCAAAAACTACAGGACTATCAGACAGGAGCTTGACTGGGACAGGTaGGAAGCCCCACCCATTTTG | + |
|
Preference number: 2 (lower is better) Translates to: TSSASSDRSKNYRTIRQELDWDR*EAPPIL Trigger: CAAAATGGGTGGGGCTTCCCACCTGTCCCAGTCAAG...CTCCTGTCTGATAGTCCTGTAGTTTTTGCTTCTATCAGAAGAGGCTGAGGACGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTTGATTGTTATGGTTTTATCAGCCAGCTTTCTTACAGACCACCAGCCCAGAGGGGTTATCTTGACTaGGACAGGTGGGAAGCCCCA | + |
|
Preference number: 2 (lower is better) Translates to: WLDCYGFISQLSYRPPAQRGYLD*DRWEAP Trigger: TGGGGCTTCCCACCTGTCCCAGTCAAGATAACCCCT...CTGGGCTGGTGGTCTGTAAGAAAGCTGGCTGATAAAACCATAACAATCAAGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CAA 90 bp | GACAGTATCTGCATTTACATCAAAGCCCTGGGAGTGACTAGTGTCTaGGTTGGTGTCACCCTTACACAACAGCTCAGGCTTACCACTCCA | + |
|
Preference number: 2 (lower is better) Translates to: DSICIYIKALGVTSV*VGVTLTQQLRLTTP Trigger: TGGAGTGGTAAGCCTGAGCTGTTGTGTAAGGGTGACACCAACCAAGACACTAGTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR CCA 90 bp | AGAACGTCCTCAGCCTCTTCTGATAGAAGCAAAAACTACAGGACTATCAGACAGAGCCTCCTGTGTACCTaGGAGCACAAGCCTGCACTT | + |
|
Preference number: 2 (lower is better) Translates to: RTSSASSDRSKNYRTIRQSLLCT*EHKPAL Trigger: AAGTGCAGGCTTGTGCTCCCAGGTACACAGGAGGCT...CTGTCTGATAGTCCTGTAGTTTTTGCTTCTATCAGAAGAGGCTGAGGACGTTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CAA 90 bp | TGTAGGGGTTATCTTGACTGGGACAGGTGGGAAGCCCCACCCATTTaGGATGGTTCCACTCAGTGGGCTCTGATATTAGACTGTATAAAA | + |
|
Preference number: 2 (lower is better) Translates to: CRGYLDWDRWEAPPI*DGSTQWALILDCIK Trigger: TTTTATACAGTCTAATATCAGAGCCCACTGAGTGGAACCATCCAAAATGGGTGGGGCTTCCCACCTGTCCCAGTCAAGATAACCCCTACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAACGTCCTCAGCCTCTTCTGATAGAAGCAAAAACTACAGGACTATCAGACAGCTCTGTAGACCAGGCTaGCCTCGAACTCAGAAATCC | + |
|
Preference number: 2 (lower is better) Translates to: RTSSASSDRSKNYRTIRQLCRPG*PRTQKS Trigger: GGATTTCTGAGTTCGAGGTCAGCCTGGTCTACAGAG...CTGTCTGATAGTCCTGTAGTTTTTGCTTCTATCAGAAGAGGCTGAGGACGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR GCA 90 bp | GGGAATGGCTCAGGCGGTAAAGTGCTTGAGGCACAAACAGGACCAGAGTTTGAACATGGAGGTCGATCATaGAGACAGTATCTGCATTTA | + |
|
Preference number: 2 (lower is better) Translates to: GNGSGGKVLEAQTGPEFEHGGRS*RQYLHL Trigger: TAAATGCAGATACTGTCTGCATGATCGACCTCCATG...TTCAAACTCTGGTCCTGTTTGTGCCTCAAGCACTTTACCGCCTGAGCCATTCCC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR CCA 90 bp | CATGCAGACAGTATCTGCATTTACATCAAAGCCCTGGGAGTGACTAGTGTCTTGCAGACCAGTTCTAGCTaGCTGCTGAGAAAAGGTCTC | + |
|
Preference number: 2 (lower is better) Translates to: HADSICIYIKALGVTSVLQTSSS*LLRKGL Trigger: GAGACCTTTTCTCAGCAGCCAGCTAGAACTGGTCTG...CAAGACACTAGTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTCTGCATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGAATGGCTCAGGCGGTAAAGTGCTTGAGGCACAAACAGGACCAGAGTTTGAACAACATTCACACTGTTaGCAAAATGGTAATACGACG | + |
|
Preference number: 2 (lower is better) Translates to: GNGSGGKVLEAQTGPEFEQHSHC*QNGNTT Trigger: CGTCGTATTACCATTTTGTCAACAGTGTGAATGTTG...TTCAAACTCTGGTCCTGTTTGTGCCTCAAGCACTTTACCGCCTGAGCCATTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAACGTCCTCAGCCTCTTCTGATAGAAGCAAAAACTACAGGACTATCAGACAGAGCCGGGGTGTAAGGTaGTGTCAGAAAACAGATGCT | + |
|
Preference number: 2 (lower is better) Translates to: RTSSASSDRSKNYRTIRQSRGVR*CQKTDA Trigger: AGCATCTGTTTTCTGACATCACCTTACACCCCGGCT...CTGTCTGATAGTCCTGTAGTTTTTGCTTCTATCAGAAGAGGCTGAGGACGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR-3UTR TCA 90 bp | CATGCAGACAGTATCTGCATTTACATCAAAGCCCTGGGAGTGACTAGTGTCTTGCCCACTGCACAAACATaGAGCCCAAAATGCTACCAA | + |
|
Preference number: 2 (lower is better) Translates to: HADSICIYIKALGVTSVLPTAQT*SPKCYQ Trigger: TTGGTAGCATTTTGGGCTTCATGTTTGTGCAGTGGG...CAAGACACTAGTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTCTGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR TCA 90 bp | CATGCAGACAGTATCTGCATTTACATCAAAGCCCTGGGAGTGACTAGTGTCTTGACAGGCAAGAGCCTGTaGAACTACCATGCAACTGAA | + |
|
Preference number: 2 (lower is better) Translates to: HADSICIYIKALGVTSVLTGKSL*NYHATE Trigger: TTCAGTTGCATGGTAGTTTCACAGGCTCTTGCCTGT...CAAGACACTAGTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTCTGCATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR TCA 90 bp | GGGAATGGCTCAGGCGGTAAAGTGCTTGAGGCACAAACAGGACCAGAGTTTGAATGGCTCTGGCCCATATaGATCAAATCATTGATTCAT | + |
|
Preference number: 2 (lower is better) Translates to: GNGSGGKVLEAQTGPEFEWLWPI*IKSLIH Trigger: ATGAATCAATGATTTGATTCATATGGGCCAGAGCCA...TTCAAACTCTGGTCCTGTTTGTGCCTCAAGCACTTTACCGCCTGAGCCATTCCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR GCA 90 bp | GGAGGTCGATCATGCAGACAGTATCTGCATTTACATCAAAGCCCTGGGAGTGACATGTCAGAAAACAGATaGTCTAACCCAACACAAGAC | + |
|
Preference number: 2 (lower is better) Translates to: GGRSCRQYLHLHQSPGSDMSENR*SNPTQD Trigger: GTCTTGTGTTGGGTTAGAGCATCTGTTTTCTGACAT...GTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTCTGCATGATCGACCTCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR CCA 90 bp | ACGTCCTCAGCCTCTTCTGATAGAAGCAAAAACTACAGGACTATCAGACAGGAGGCAGTGTTTAGCAACTaGTGTGCTAACTACAGGAAG | + |
|
Preference number: 2 (lower is better) Translates to: TSSASSDRSKNYRTIRQEAVFSN*CANYRK Trigger: CTTCCTGTAGTTAGCACACCAGTTGCTAAACACTGC...CTCCTGTCTGATAGTCCTGTAGTTTTTGCTTCTATCAGAAGAGGCTGAGGACGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR CCA 90 bp | CATGCAGACAGTATCTGCATTTACATCAAAGCCCTGGGAGTGACTAGTGTCTTGTTTGAAGTCCTAGGATaGACCATTGCCTCACATTGC | + |
|
Preference number: 2 (lower is better) Translates to: HADSICIYIKALGVTSVLFEVLG*TIASHC Trigger: GCAATGTGAGGCAATGGTCCATCCTAGGACTTCAAA...CAAGACACTAGTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTCTGCATG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR CCA 90 bp | TGGCTTGATTGTTATGGTTTTATCAGCCAGCTTTCTTACAGACCACCAGCCCAGATAAACCAGGTATCATaGAACACACAACCTGGGCAC | + |
|
Preference number: 2 (lower is better) Translates to: WLDCYGFISQLSYRPPAQINQVS*NTQPGH Trigger: GTGCCCAGGTTGTGTGTTCCATGATACCTGGTTTAT...CTGGGCTGGTGGTCTGTAAGAAAGCTGGCTGATAAAACCATAACAATCAAGCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR TCA 90 bp | AGAACGTCCTCAGCCTCTTCTGATAGAAGCAAAAACTACAGGACTATCAGACAGTTCTTTCCTCTCAGATaGCTTCAGCTTGTGTCAAGC | + |
|
Preference number: 2 (lower is better) Translates to: RTSSASSDRSKNYRTIRQFFPLR*LQLVSS Trigger: GCTTGACACAAGCTGAAGTCATCTGAGAGGAAAGAA...CTGTCTGATAGTCCTGTAGTTTTTGCTTCTATCAGAAGAGGCTGAGGACGTTCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR CCA 90 bp | AATTGCTATGATATGATTAAATTCCATGACCAAAGCAATCTGGGAAGAAAAGGGCCCACCACAGTGGGCTaGACCCTCCCACATCAATCA | + |
|
Preference number: 2 (lower is better) Translates to: NCYDMIKFHDQSNLGRKGPTTVG*TLPHQS Trigger: TGATTGATGTGGGAGGGTCCAGCCCACTGTGGTGGG...CCCTTTTCTTCCCAGATTGCTTTGGTCATGGAATTTAATCATATCATAGCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CAA 90 bp | GAATTAAAGGTGTGGGCCACTACTGGCCAGCAGAACATGAACAATTaGATTCTCCATAGAGAAGAAGAGTTCAAACAGCAGCACACTACT | + |
|
Preference number: 2 (lower is better) Translates to: ELKVWATTGQQNMNN*ILHREEEFKQQHTT Trigger: AGTAGTGTGCTGCTGTTTGAACTCTTCTTCTCTATGGAGAATCAAATTGTTCATGTTCTGCTGGCCAGTAGTGGCCCACACCTTTAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR TCA 90 bp | CTTACTCAAGGAAAGCTCCTCTCCAAGCCAAGAAGTGCATACAGCTCAAAGTGTAAAGTATTTCAATTCTaGCACTCACAGCACACAGCT | + |
|
Preference number: 2 (lower is better) Translates to: LTQGKLLSKPRSAYSSKCKVFQF*HSQHTA Trigger: AGCTGTGTGCTGTGAGTGTCAGAATTGAAATACTTT...ACACTTTGAGCTGTATGCACTTCTTGGCTTGGAGAGGAGCTTTCCTTGAGTAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR GCA 90 bp | GGATGGACCATTGCCTCACATTGCCAAGCAAGTCTATCACTAAAAGCTACATCACTGTACAGTTTCATCTaGTCTGTTTTAGTAGCAGGG | + |
|
Preference number: 2 (lower is better) Translates to: GWTIASHCQASLSLKATSLYSFI*SVLVAG Trigger: CCCTGCTACTAAAACAGAGCAGATGAAACTGTACAG...TGATGTAGCTTTTAGTGATAGACTTGCTTGGCAATGTGAGGCAATGGTCCATCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR-3UTR CCA 90 bp | AGAACGTCCTCAGCCTCTTCTGATAGAAGCAAAAACTACAGGACTATCAGACAGCATTCCTGGACTTCCTaGCATTATCTTAACTGCTTC | + |
|
Preference number: 2 (lower is better) Translates to: RTSSASSDRSKNYRTIRQHSWTS*HYLNCF Trigger: GAAGCAGTTAAGATAATGCCAGGAAGTCCAGGAATG...CTGTCTGATAGTCCTGTAGTTTTTGCTTCTATCAGAAGAGGCTGAGGACGTTCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR TCA 90 bp | TTCTTATGCGATCTGAAAAGGAGAGGGCATAGAGGAGCCCAAAGTTTACATGACAGTACAGATAAGGAGTaGATACATGAGGATGGCTTT | + |
|
Preference number: 2 (lower is better) Translates to: FLCDLKRRGHRGAQSLHDSTDKE*IHEDGF Trigger: AAAGCCATCCTCATGTATTCACTCCTTATCTGTACT...GTCATGTAAACTTTGGGCTCCTCTATGCCCTCTCCTTTTCAGATCGCATAAGAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR GCA 90 bp | TGGCTTGATTGTTATGGTTTTATCAGCCAGCTTTCTTACAGACCACCAGCCCAGACATATGAATTCTTATaGGATCTGAAAAGGAGAGGG | + |
|
Preference number: 2 (lower is better) Translates to: WLDCYGFISQLSYRPPAQTYEFL*DLKRRG Trigger: CCCTCTCCTTTTCAGATCGCATAAGAATTCATATGT...CTGGGCTGGTGGTCTGTAAGAAAGCTGGCTGATAAAACCATAACAATCAAGCCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR CCA 90 bp | CATGCAGACAGTATCTGCATTTACATCAAAGCCCTGGGAGTGACTAGTGTCTTGGTTCTACCCCAAGAATaGCCACATATGAATTCTTAT | + |
|
Preference number: 2 (lower is better) Translates to: HADSICIYIKALGVTSVLVLPQE*PHMNSY Trigger: ATAAGAATTCATATGTGGCCATTCTTGGGGTAGAAC...CAAGACACTAGTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTCTGCATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTATCTAACAGTGATGACTCCCCTTTTTATATAAGTAGTCAGCTTATGATTAATTTGCCAATCTCCTaGCTCAGCCTCCTGTGTACC | + |
|
Preference number: 2 (lower is better) Translates to: EVSNSDDSPFYISSQLMINLPIS*LSLLCT Trigger: GGTACACAGGAGGCTGAGGCAGGAGATTGGCAAATT...AATCATAAGCTGACTACTTATATAAAAAGGGGAGTCATCACTGTTAGATACCTC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CAA 90 bp | AACTCACTTACAAGACTTAAGATGGGCAAAATAAAGTTCCCTTGCTaGTCAACCATTTTATTCTCACACTGCATCCAGGCTATAGCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: NSLTRLKMGKIKFPC*STILFSHCIQAIAG Trigger: TCCAGCTATAGCCTGGATGCAGTGTGAGAATAAAATGGTTGACAAGCAAGGGAACTTTATTTTGCCCATCTTAAGTCTTGTAAGTGAGTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CAA 90 bp | TCACATTGCCAAGCAAGTCTATCACTAAAAGCTACATCACCAGCCTaGACTTTAATAATTTCAGTTCTACCCCAAGAATGGCCACATATG | + |
|
Preference number: 2 (lower is better) Translates to: SHCQASLSLKATSPA*TLIISVLPQEWPHM Trigger: CATATGTGGCCATTCTTGGGGTAGAACTGAAATTATTAAAGTCAAGGCTGGTGATGTAGCTTTTAGTGATAGACTTGCTTGGCAATGTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CAA 90 bp | AGGCATTTTCTCAACCGAAGTTCTTTCCTCTCAGATGACTTCAGCTaGTGTCAAGCTGACATAAAATTACCAATAGCACTCATTCATTGT | + |
|
Preference number: 2 (lower is better) Translates to: RHFLNRSSFLSDDFS*CQADIKLPIALIHC Trigger: ACAATGAATGAGTGCTATTGGTAATTTTATGTCAGCTTGACACAAGCTGAAGTCATCTGAGAGGAAAGAACTTCGGTTGAGAAAATGCCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR TCA 90 bp | AAAAGAACCATGAAGAAAGCTAGTCTACATGTCCAACAATATACAGCAATCACATTGACCTTGCTGGGTTaGACTGTACAGTTTCATCTG | + |
|
Preference number: 2 (lower is better) Translates to: KRTMKKASLHVQQYTAITLTLLG*TVQFHL Trigger: CAGATGAAACTGTACAGTTCAACCCAGCAAGGTCAA...TGTGATTGCTGTATATTGTTGGACATGTAGACTAGCTTTCTTCATGGTTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR TCA 90 bp | GAGGTATCTAACAGTGATGACTCCCCTTTTTATATAAGTAGTCAGCTTATGATTATTGGAAAACAGTGTTaGGGCTGGGGCTATACATCA | + |
|
Preference number: 2 (lower is better) Translates to: EVSNSDDSPFYISSQLMIIGKQC*GWGYTS Trigger: TGATGTATAGCCCCAGCCTCAACACTGTTTTCCAAT...AATCATAAGCTGACTACTTATATAAAAAGGGGAGTCATCACTGTTAGATACCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR CCA 90 bp | AAAAGAACCATGAAGAAAGCTAGTCTACATGTCCAACAATATACAGCAATCACAGGCTATAGCTGGAAATaGAGGACTAATCTGGACCTA | + |
|
Preference number: 2 (lower is better) Translates to: KRTMKKASLHVQQYTAITGYSWK*RTNLDL Trigger: TAGGTCCAGATTAGTCCTCCATTTCCAGCTATAGCC...TGTGATTGCTGTATATTGTTGGACATGTAGACTAGCTTTCTTCATGGTTCTTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CAA 90 bp | TGGAAATGGAGGACTAATCTGGACCTAGAAAACATCATTGTTTACTaGTGGGAGAAATTACAAACAAGACAACAAACCTGTCAGTCAGTA | + |
|
Preference number: 2 (lower is better) Translates to: WKWRTNLDLENIIVY*WEKLQTRQQTCQSV Trigger: TACTGACTGACAGGTTTGTTGTCTTGTTTGTAATTTCTCCCACAAGTAAACAATGATGTTTTCTAGGTCCAGATTAGTCCTCCATTTCCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR GCA 90 bp | GAGGTATCTAACAGTGATGACTCCCCTTTTTATATAAGTAGTCAGCTTATGATTCATGCAGACAGTATCTaGATTTACATCAAAGCCCTG | + |
|
Preference number: 2 (lower is better) Translates to: EVSNSDDSPFYISSQLMIHADSI*IYIKAL Trigger: CAGGGCTTTGATGTAAATGCAGATACTGTCTGCATG...AATCATAAGCTGACTACTTATATAAAAAGGGGAGTCATCACTGTTAGATACCTC 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR TCA 90 bp | AATTGCTATGATATGATTAAATTCCATGACCAAAGCAATCTGGGAAGAAAAGGGCATCTCCTTTATTTTTaGGGCAAAGACAAACCTGTA | + |
|
Preference number: 2 (lower is better) Translates to: NCYDMIKFHDQSNLGRKGHLLYF*GKDKPV Trigger: TACAGGTTTGTCTTTGCCTCAAAAATAAAGGAGATG...CCCTTTTCTTCCCAGATTGCTTTGGTCATGGAATTTAATCATATCATAGCAATT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR GCA 72 bp | ATCAGCCAGCTTTCTTACAGACCACCAGCCCAGGGATaGCCCCACCACAGTGGGCTGGACCCTCCCACATCA | + |
|
Preference number: 3 (lower is better) Translates to: ISQLSYRPPAQG*PHHSGLDPPTS Trigger: TGATGTGGGAGGGTCCAGCCCACTGTGGTGGGGGCATCCCTGGGCTGGTGGTCTGTAAGAAAGCTGGCTGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | GGTGGCAATGACCTAGAGTCCCAGCTGCTCACAGGCTaGGGCAAGAGGAGAGCTTCAGCCCAGGAGGTTGAG | + |
|
Preference number: 3 (lower is better) Translates to: GGNDLESQLLTG*GKRRASAQEVE Trigger: CTCAACCTCCTGGGCTGAAGCTCTCCTCTTGCCTCAGCCTGTGAGCAGCTGGGACTCTAGGTCATTGCCACC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | TTTAGCAACTGGTGTGCTAACTACAGGAAGAGGCACTaGGCTAGCCCTCCCTGGCAACTGCGGCGCCAGCAA | + |
|
Preference number: 3 (lower is better) Translates to: FSNWCANYRKRH*ASPPWQLRRQQ Trigger: TTGCTGGCGCCGCAGTTGCCAGGGAGGGCTAGCTCAGTGCCTCTTCCTGTAGTTAGCACACCAGTTGCTAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | GGAACTCAATTAGTGCAAGAACCTGGAGGCAGGAGCTaGCGCAGAGGCCATGGAGAGGTGCTGCTTACTGGC | + |
|
Preference number: 3 (lower is better) Translates to: GTQLVQEPGGRS*RRGHGEVLLTG Trigger: GCCAGTAAGCAGCACCTCTCCATGGCCTCTGCGTCAGCTCCTGCCTCCAGGTTCTTGCACTAATTGAGTTCC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR GCA 72 bp | CAGGCTACCCCTGAAGCCTTGAATTTGCCAATCTCCTaGCTCAGCCTCCTGTGTACCTGGGAGCACAAGCCT | + |
|
Preference number: 3 (lower is better) Translates to: QATPEALNLPIS*LSLLCTWEHKP Trigger: AGGCTTGTGCTCCCAGGTACACAGGAGGCTGAGGCAGGAGATTGGCAAATTCAAGGCTTCAGGGGTAGCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR GCA 72 bp | CCAGGAGGGACTGAAGCTAGCAGTTGCTGCCAGAGATaGCTAAGGGTCTTCCACCTTAGTCAGCCCTTCCAG | + |
|
Preference number: 3 (lower is better) Translates to: PGGTEASSCCQR*LRVFHLSQPFQ Trigger: CTGGAAGGGCTGACTAAGGTGGAAGACCCTTAGGCATCTCTGGCAGCAACTGCTAGCTTCAGTCCCTCCTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CCA 72 bp | TCATTAGGTAGCCTAGACAGGCTACCAGGTGAGCCCTaGGGAACCAATCCCCGCCTCCTTGGCACTGGTATT | + |
|
Preference number: 3 (lower is better) Translates to: SLGSLDRLPGEP*GTNPRLLGTGI Trigger: AATACCAGTGCCAAGGAGGCGGGGATTGGTTCCCCAGGGCTCACCTGGTAGCCTGTCTAGGCTACCTAATGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR GCA 72 bp | GGGATGCACTCACCAGGAGGGACTGAAGCTAGCAGTTaGTGCCAGAGATGCCTAAGGGTCTTCCACCTTAGT | + |
|
Preference number: 3 (lower is better) Translates to: GMHSPGGTEASS*CQRCLRVFHLS Trigger: ACTAAGGTGGAAGACCCTTAGGCATCTCTGGCAGCAACTGCTAGCTTCAGTCCCTCCTGGTGAGTGCATCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CCA 72 bp | AATTTGCCAATCTCCTGCCTCAGCCTCCTGTGTACCTaGGAGCACAAGCCTGCACTTTCAGGCCCCACTTTC | + |
|
Preference number: 3 (lower is better) Translates to: NLPISCLSLLCT*EHKPALSGPTF Trigger: GAAAGTGGGGCCTGAAAGTGCAGGCTTGTGCTCCCAGGTACACAGGAGGCTGAGGCAGGAGATTGGCAAATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR GCA 72 bp | ATGCACTCACCAGGAGGGACTGAAGCTAGCAGTTGCTaGCAGAGATGCCTAAGGGTCTTCCACCTTAGTCAG | + |
|
Preference number: 3 (lower is better) Translates to: MHSPGGTEASSC*QRCLRVFHLSQ Trigger: CTGACTAAGGTGGAAGACCCTTAGGCATCTCTGGCAGCAACTGCTAGCTTCAGTCCCTCCTGGTGAGTGCAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CCA 72 bp | AGGAATTCAGGCTGGAACTCAATTAGTGCAAGAACCTaGAGGCAGGAGCTGACGCAGAGGCCATGGAGAGGT | + |
|
Preference number: 3 (lower is better) Translates to: RNSGWNSISART*RQELTQRPWRG Trigger: ACCTCTCCATGGCCTCTGCGTCAGCTCCTGCCTCCAGGTTCTTGCACTAATTGAGTTCCAGCCTGAATTCCT 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CCA 72 bp | GGAAACGGAAACAGAGGTGCGAGTTCCAGGCCAGCCTaGACTACCAGCAAAACCCTGTCTCAAATGGTAAAC | + |
|
Preference number: 3 (lower is better) Translates to: GNGNRGASSRPA*TTSKTLSQMVN Trigger: GTTTACCATTTGAGACAGGGTTTTGCTGGTAGTCCAGGCTGGCCTGGAACTCGCACCTCTGTTTCCGTTTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR CAA 90 bp | GGAGGTCGATCATGCAGACAGTATCTGCATTTACATCAAAGCCCTGGGAGTGACCTGCACAACGAAGGGTaGAACCCAAGGCCTCAAACA | + |
|
Preference number: 3 (lower is better) Translates to: GGRSCRQYLHLHQSPGSDLHNEG*NPRPQT Trigger: TGTTTGAGGCCTTGGGTTCAACCCTTCGTTGTGCAG...GTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTCTGCATGATCGACCTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | GATCTCACTCAGTTAGACAGGCTACCCCTGAAGCCTTaGATTTGCCAATCTCCTGCCTCAGCCTCCTGTGTA | + |
|
Preference number: 3 (lower is better) Translates to: DLTQLDRLPLKP*ICQSPASASCV Trigger: TACACAGGAGGCTGAGGCAGGAGATTGGCAAATTCAAGGCTTCAGGGGTAGCCTGTCTAACTGAGTGAGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | ACCAGCATGGACCCATTTCTATCTCCTGCCTGGGAATaGGATGGGAGCAGCTGCTTCAAGCTCCTAACACTT | + |
|
Preference number: 3 (lower is better) Translates to: TSMDPFLSPAWE*DGSSCFKLLTL Trigger: AAGTGTTAGGAGCTTGAAGCAGCTGCTCCCATCTCATTCCCAGGCAGGAGATAGAAATGGGTCCATGCTGGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR GCA 72 bp | ATCAGACAGGAGCTGGGAATGGCTCAGGCGGTAAAGTaGTTGAGGCACAAACAGGACCAGAGTTTGAATCCA | + |
|
Preference number: 3 (lower is better) Translates to: IRQELGMAQAVK*LRHKQDQSLNP Trigger: TGGATTCAAACTCTGGTCCTGTTTGTGCCTCAAGCACTTTACCGCCTGAGCCATTCCCAGCTCCTGTCTGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CCA 72 bp | CAACAATATACAGCAATCACAGCTCATTCCTCAGGATaGGAAATTAGAGTCAGCCTCCTGCCACCCCGCTCG | + |
|
Preference number: 3 (lower is better) Translates to: QQYTAITAHSSG*EIRVSLLPPRS Trigger: CGAGCGGGGTGGCAGGAGGCTGACTCTAATTTCCCATCCTGAGGAATGAGCTGTGATTGCTGTATATTGTTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR CAA 90 bp | CTTACTCAAGGAAAGCTCCTCTCCAAGCCAAGAAGTGCATACAGCTCAAAGTGTAGCATGCCGGCTCTTTaGCATTCCTGGACTTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: LTQGKLLSKPRSAYSSKCSMPAL*HSWTSW Trigger: CCAGGAAGTCCAGGAATGCAAAAGAGCCGGCATGCT...ACACTTTGAGCTGTATGCACTTCTTGGCTTGGAGAGGAGCTTTCCTTGAGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | ACTGACATGGGTGCTGGGAACCCAACTCAGAGCCTCTaGAAGCTATACATGCTCTTAACTGCTGAGCCATCT | + |
|
Preference number: 3 (lower is better) Translates to: TDMGAGNPTQSL*KLYMLLTAEPS Trigger: AGATGGCTCAGCAGTTAAGAGCATGTATAGCTTTCAGAGGCTCTGAGTTGGGTTCCCAGCACCCATGTCAGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CCA 72 bp | GAGCTGACGCAGAGGCCATGGAGAGGTGCTGCTTACTaGCTTGATTGTTATGGTTTTATCAGCCAGCTTTCT | + |
|
Preference number: 3 (lower is better) Translates to: ELTQRPWRGAAY*LDCYGFISQLS Trigger: AGAAAGCTGGCTGATAAAACCATAACAATCAAGCCAGTAAGCAGCACCTCTCCATGGCCTCTGCGTCAGCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CCA 72 bp | GCAGCCACAGTCAACAAGAACTCAGAATTATCCAAATaGGAGACCGCCACACCAAGGACTGAAATCCCACTC | + |
|
Preference number: 3 (lower is better) Translates to: AATVNKNSELSK*ETATPRTEIPL Trigger: GAGTGGGATTTCAGTCCTTGGTGTGGCGGTCTCCCATTTGGATAATTCTGAGTTCTTGTTGACTGTGGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | GACGCAGAGGCCATGGAGAGGTGCTGCTTACTGGCTTaGTTGTTATGGTTTTATCAGCCAGCTTTCTTACAG | + |
|
Preference number: 3 (lower is better) Translates to: DAEAMERCCLLA*LLWFYQPAFLQ Trigger: CTGTAAGAAAGCTGGCTGATAAAACCATAACAATCAAGCCAGTAAGCAGCACCTCTCCATGGCCTCTGCGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | CACACACACACAGAACACAGTGTTCTCACAGAGCAGTaGGTGGTAATGCAGCCACAGTCAACAAGAACTCAG | + |
|
Preference number: 3 (lower is better) Translates to: HTHTEHSVLTEQ*VVMQPQSTRTQ Trigger: CTGAGTTCTTGTTGACTGTGGCTGCATTACCACTCACTGCTCTGTGAGAACACTGTGTTCTGTGTGTGTGTG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | GTCTCTAAGAAGCCACTCCTCAGTACAGATAAGGAGTaGATACATGAGGATGGCTTTCTACTCCCAGACCAG | + |
|
Preference number: 3 (lower is better) Translates to: VSKKPLLSTDKE*IHEDGFLLPDQ Trigger: CTGGTCTGGGAGTAGAAAGCCATCCTCATGTATTCACTCCTTATCTGTACTGAGGAGTGGCTTCTTAGAGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | CTGAAACTGAATTTCAAGAGTTATGTATGGTGGCAATaGCCTAGAGTCCCAGCTGCTCACAGGCTGAGGCAA | + |
|
Preference number: 3 (lower is better) Translates to: LKLNFKSYVWWQ*PRVPAAHRLRQ Trigger: TTGCCTCAGCCTGTGAGCAGCTGGGACTCTAGGTCATTGCCACCATACATAACTCTTGAAATTCAGTTTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | CAGACAGTATCTGCATTTACATCAAAGCCCTGGGAGTaGCTAGTGTCTTGGTTGGTGTCACCCTTACACAAC | + |
|
Preference number: 3 (lower is better) Translates to: QTVSAFTSKPWE*LVSWLVSPLHN Trigger: GTTGTGTAAGGGTGACACCAACCAAGACACTAGTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTCTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR GCA 72 bp | CAAAGTGTTAGCTGGAGTGTACCTCATCAGGCAGAGTaGTCAGCTACCACGGACAAAACCTTAGGTTTCAAT | + |
|
Preference number: 3 (lower is better) Translates to: QSVSWSVPHQAE*SATTDKTLGFN Trigger: ATTGAAACCTAAGGTTTTGTCCGTGGTAGCTGAGCACTCTGCCTGATGAGGTACACTCCAGCTAACACTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR GCA 72 bp | ACTTACTCAAGGAAAGCTCCTCTCCAAGCCAAGAAGTaGATACAGCTCAAAGTGTTAGCTGGAGTGTACCTC | + |
|
Preference number: 3 (lower is better) Translates to: TYSRKAPLQAKK*IQLKVLAGVYL Trigger: GAGGTACACTCCAGCTAACACTTTGAGCTGTATGCACTTCTTGGCTTGGAGAGGAGCTTTCCTTGAGTAAGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | AAAGGACTTTTACCAAGGGACCAACATTCACACTGTTaGCAAAATGGTAATACGACGACAACACGGCACGGC | + |
|
Preference number: 3 (lower is better) Translates to: KGLLPRDQHSHC*QNGNTTTTRHG Trigger: GCCGTGCCGTGTTGTCGTCGTATTACCATTTTGTCAACAGTGTGAATGTTGGTCCCTTGGTAAAAGTCCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | CCCCAAGAATGGCCACATATGAATTCTTATGCGATCTaGAAAGGAGAGGGCATAGAGGAGCCCAAAGTTTAC | + |
|
Preference number: 3 (lower is better) Translates to: PQEWPHMNSYAI*KGEGIEEPKVY Trigger: GTAAACTTTGGGCTCCTCTATGCCCTCTCCTTTTCAGATCGCATAAGAATTCATATGTGGCCATTCTTGGGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | AAGAACAGGCAAGAGCCTGTGAAACTACCATGCAACTaGAAAGCCTTCTACCTTCCCAGACACTTTCAAGAG | + |
|
Preference number: 3 (lower is better) Translates to: KNRQEPVKLPCN*KAFYLPRHFQE Trigger: CTCTTGAAAGTGTCTGGGAAGGTAGAAGGCTTTTCAGTTGCATGGTAGTTTCACAGGCTCTTGCCTGTTCTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | ATTAAACCAACCATGCTGGTAAAAGCCTGGAATCCCTaGGCTAGGGAGGTGGAGGCAATTAGGAATTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: IKPTMLVKAWNP*AREVEAIRNWK Trigger: TTTCCAATTCCTAATTGCCTCCACCTCCCTAGCTCAGGGATTCCAGGCTTTTACCAGCATGGTTGGTTTAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | TCTGATATTAGACTGTATAAAAGGCAGAAAGGCAGCTaGGCACCAGCATGGACCCATTTCTATCTCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: SDIRLYKRQKGS*APAWTHFYLLP Trigger: AGGCAGGAGATAGAAATGGGTCCATGCTGGTGCTCAGCTGCCTTTCTGCCTTTTATACAGTCTAATATCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR GCA 72 bp | AGTTCTACCCCAAGAATGGCCACATATGAATTCTTATaGGATCTGAAAAGGAGAGGGCATAGAGGAGCCCAA | + |
|
Preference number: 3 (lower is better) Translates to: SSTPRMATYEFL*DLKRRGHRGAQ Trigger: TTGGGCTCCTCTATGCCCTCTCCTTTTCAGATCGCATAAGAATTCATATGTGGCCATTCTTGGGGTAGAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR GCA 72 bp | CCATGGCCTGATAAAAGCCAGTGTCAAAGATCCCACTaGACAAACATGAAGCCCAAAATGCTACCAAGAAAG | + |
|
Preference number: 3 (lower is better) Translates to: PWPDKSQCQRSH*TNMKPKMLPRK Trigger: CTTTCTTGGTAGCATTTTGGGCTTCATGTTTGTGCAGTGGGATCTTTGACACTGGCTTTTATCAGGCCATGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | GCTATACATCAATTGCTAAAACGTTTGCCCTGGACTTaGTCCCTGGCATGGCATAAACCAGGTATCATGGAA | + |
|
Preference number: 3 (lower is better) Translates to: AIHQLLKRLPWT*SLAWHKPGIME Trigger: TTCCATGATACCTGGTTTATGCCATGCCAGGGATCAAGTCCAGGGCAAACGTTTTAGCAATTGATGTATAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | AAACCAAAGGCCATAACTTACTCTAACTTACATGTGTaGGAGCATGCCGGCTCTTTTGCATTCCTGGACTTC | + |
|
Preference number: 3 (lower is better) Translates to: KPKAITYSNLHV*EHAGSFAFLDF Trigger: GAAGTCCAGGAATGCAAAAGAGCCGGCATGCTCTCACACATGTAAGTTAGAGTAAGTTATGGCCTTTGGTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | AGCACTGCTCAGATGGTAGCTGCAGACGTGTTTCTATaGACTAGCTTCCTTTGTTTAACAGAAAGAGAGCAG | + |
|
Preference number: 3 (lower is better) Translates to: STAQMVAADVFL*TSFLCLTEREQ Trigger: CTGCTCTCTTTCTGTTAAACAAAGGAAGCTAGTTCATAGAAACACGTCTGCAGCTACCATCTGAGCAGTGCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR GCA 72 bp | AATTTCTTCATGGAGGTCGATCATGCAGACAGTATCTaGATTTACATCAAAGCCCTGGGAGTGACTAGTGTC | + |
|
Preference number: 3 (lower is better) Translates to: NFFMEVDHADSI*IYIKALGVTSV Trigger: GACACTAGTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTCTGCATGATCGACCTCCATGAAGAAATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CCA 72 bp | TGTGTGGGAATAAGCCTTCCACTGTTCTGTGTGGTGTaGTACTCCATACCTGTGAGACATTTATTCATTCAG | + |
|
Preference number: 3 (lower is better) Translates to: CVGISLPLFCVV*YSIPVRHLFIQ Trigger: CTGAATGAATAAATGTCTCACAGGTATGGAGTACCACACCACACAGAACAGTGGAAGGCTTATTCCCACACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR CAA 90 bp | ACGTCCTCAGCCTCTTCTGATAGAAGCAAAAACTACAGGACTATCAGACAGGAGCCATCTCCTTTATTTTaGAGGCAAAGACAAACCTGT | + |
|
Preference number: 3 (lower is better) Translates to: TSSASSDRSKNYRTIRQEPSPLF*RQRQTC Trigger: ACAGGTTTGTCTTTGCCTCAAAAATAAAGGAGATGG...CTCCTGTCTGATAGTCCTGTAGTTTTTGCTTCTATCAGAAGAGGCTGAGGACGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | ATAAAAGCCAGTGTCAAAGATCCCACTGCACAAACATaGAGCCCAAAATGCTACCAAGAAAGAAAGGGTGAC | + |
|
Preference number: 3 (lower is better) Translates to: IKASVKDPTAQT*SPKCYQERKGD Trigger: GTCACCCTTTCTTTCTTGGTAGCATTTTGGGCTTCATGTTTGTGCAGTGGGATCTTTGACACTGGCTTTTAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | TTCTTCGGCTTACACTTTCACATCATAGTCCACCACTaGAGGAATTCAGGCTGGAACTCAATTAGTGCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: FFGLHFHIIVHH*RNSGWNSISAR Trigger: TCTTGCACTAATTGAGTTCCAGCCTGAATTCCTTCAGTGGTGGACTATGATGTGAAAGTGTAAGCCGAAGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTATCTAACAGTGATGACTCCCCTTTTTATATAAGTAGTCAGCTTATGATTGCTACCCCTGAAGCCTaGAATTTGCCAATCTCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: EVSNSDDSPFYISSQLMIATPEA*NLPISC Trigger: GCAGGAGATTGGCAAATTCAAGGCTTCAGGGGTAGC...AATCATAAGCTGACTACTTATATAAAAAGGGGAGTCATCACTGTTAGATACCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | CATATTGTTTCAGCGCCCCTACCATCTTTGTGGGGTTaGGGTTCAGATGTACACAAGTACATTTATATGTGT | + |
|
Preference number: 3 (lower is better) Translates to: HIVSAPLPSLWG*GSDVHKYIYMC Trigger: ACACATATAAATGTACTTGTGTACATCTGAACCTCAACCCCACAAAGATGGTAGGGGCGCTGAAACAATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR TCA 72 bp | ATTCATTCAGTGGGCAAATGTTTAACAGCTACTGTGTaGACAAGAGAACGTCCTCAGCCTCTTCTGATAGAA | + |
|
Preference number: 3 (lower is better) Translates to: IHSVGKCLTATV*TRERPQPLLIE Trigger: TTCTATCAGAAGAGGCTGAGGACGTTCTCTTGTTCACACAGTAGCTGTTAAACATTTGCCCACTGAATGAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CCA 72 bp | AACCATTTTATTCTCACACTGCATCCAGGCTATAGCTaGAAATGGAGGACTAATCTGGACCTAGAAAACATC | + |
|
Preference number: 3 (lower is better) Translates to: NHFILTLHPGYS*KWRTNLDLENI Trigger: GATGTTTTCTAGGTCCAGATTAGTCCTCCATTTCCAGCTATAGCCTGGATGCAGTGTGAGAATAAAATGGTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CCA 72 bp | CCCACATCAATCACTAATTCCTACAAGTCAATCTTATaGAGGCATTTTCTCAACCGAAGTTCTTTCCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: PTSITNSYKSIL*RHFLNRSSFLS Trigger: TGAGAGGAAAGAACTTCGGTTGAGAAAATGCCTCCATAAGATTGACTTGTAGGAATTAGTGATTGATGTGGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CCA 72 bp | TCAACATCTTCAATTCAAACACCTTTAATTTCTTCATaGAGGTCGATCATGCAGACAGTATCTGCATTTACA | + |
|
Preference number: 3 (lower is better) Translates to: STSSIQTPLISS*RSIMQTVSAFT Trigger: TGTAAATGCAGATACTGTCTGCATGATCGACCTCCATGAAGAAATTAAAGGTGTTTGAATTGAAGATGTTGA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CAA 72 bp | AGCCTCCTGCCACCCCGCTCGCTGCACAACGAAGGGTaGAACCCAAGGCCTCAAACATGCGAGGGAAAGTCA | + |
|
Preference number: 4 (lower is better) Translates to: SLLPPRSLHNEG*NPRPQTCEGKS Trigger: TGACTTTCCCTCGCATGTTTGAGGCCTTGGGTTCAACCCTTCGTTGTGCAGCGAGCGGGGTGGCAGGAGGCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CAA 72 bp | CACTCAGTTAGACAGGCTACCCCTGAAGCCTTGAATTaGCCAATCTCCTGCCTCAGCCTCCTGTGTACCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HSVRQATPEALN*PISCLSLLCTW Trigger: CCAGGTACACAGGAGGCTGAGGCAGGAGATTGGCAAATTCAAGGCTTCAGGGGTAGCCTGTCTAACTGAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CAA 72 bp | GGATCTCACTCAGTTAGACAGGCTACCCCTGAAGCCTaGAATTTGCCAATCTCCTGCCTCAGCCTCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: GSHSVRQATPEA*NLPISCLSLLC Trigger: ACACAGGAGGCTGAGGCAGGAGATTGGCAAATTCAAGGCTTCAGGGGTAGCCTGTCTAACTGAGTGAGATCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CAA 72 bp | TATCTTGACTGGGACAGGTGGGAAGCCCCACCCATTTaGGATGGTTCCACTCAGTGGGCTCTGATATTAGAC | + |
|
Preference number: 4 (lower is better) Translates to: YLDWDRWEAPPI*DGSTQWALILD Trigger: GTCTAATATCAGAGCCCACTGAGTGGAACCATCCAAAATGGGTGGGGCTTCCCACCTGTCCCAGTCAAGATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| CDS-3UTR TCA 90 bp | ACGTCCTCAGCCTCTTCTGATAGAAGCAAAAACTACAGGACTATCAGACAGGAGCCCTGGTGGACCCCTTaGAGTAGGGTCAAAATCTCT | + |
|
Preference number: 4 (lower is better) Translates to: TSSASSDRSKNYRTIRQEPWWTP*SRVKIS Trigger: AGAGATTTTGACCCTACTTCAAGGGGTCCACCAGGG...CTCCTGTCTGATAGTCCTGTAGTTTTTGCTTCTATCAGAAGAGGCTGAGGACGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| 3UTR CAA 72 bp | TGCATTTACATCAAAGCCCTGGGAGTGACTAGTGTCTaGGTTGGTGTCACCCTTACACAACAGCTCAGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: CIYIKALGVTSV*VGVTLTQQLRL Trigger: AAGCCTGAGCTGTTGTGTAAGGGTGACACCAACCAAGACACTAGTCACTCCCAGGGCTTTGATGTAAATGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| CDS-3UTR TCA 90 bp | GGATGGACCATTGCCTCACATTGCCAAGCAAGTCTATCACTAAAAGCTACATCACTCTTTGGAATGTCCTaGAATCCAGTACCCTGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: GWTIASHCQASLSLKATSLFGMS*NPVPWW Trigger: CCACCAGGGTACTGGATTTCAGGACATTCCAAAGAG...TGATGTAGCTTTTAGTGATAGACTTGCTTGGCAATGTGAGGCAATGGTCCATCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| CDS-3UTR TCA 90 bp | TTCTTATGCGATCTGAAAAGGAGAGGGCATAGAGGAGCCCAAAGTTTACATGACCTGCTGTCTCCTTATTaGAGCCTCGGATGGAAAGGT | + |
|
Preference number: 4 (lower is better) Translates to: FLCDLKRRGHRGAQSLHDLLSPY*SLGWKG Trigger: ACCTTTCCATCCGAGGCTTCAATAAGGAGACAGCAG...GTCATGTAAACTTTGGGCTCCTCTATGCCCTCTCCTTTTCAGATCGCATAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
||
| CDS-3UTR GCA 90 bp | TTCTTATGCGATCTGAAAAGGAGAGGGCATAGAGGAGCCCAAAGTTTACATGACATATACCACAAATGCTaGCAGGAAGACCAGGCGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FLCDLKRRGHRGAQSLHDIYHKC*QEDQAL Trigger: CAGCGCCTGGTCTTCCTGGCAGCATTTGTGGTATAT...GTCATGTAAACTTTGGGCTCCTCTATGCCCTCTCCTTTTCAGATCGCATAAGAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| CDS-3UTR GCA 90 bp | TGGCTTGATTGTTATGGTTTTATCAGCCAGCTTTCTTACAGACCACCAGCCCAGCAAATATACCACAAATaGTGCCAGGAAGACCAGGCG | + |
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Preference number: 4 (lower is better) Translates to: WLDCYGFISQLSYRPPAQQIYHK*CQEDQA Trigger: CGCCTGGTCTTCCTGGCAGCATTTGTGGTATATTTG...CTGGGCTGGTGGTCTGTAAGAAAGCTGGCTGATAAAACCATAACAATCAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| CDS-3UTR GCA 90 bp | AGAACGTCCTCAGCCTCTTCTGATAGAAGCAAAAACTACAGGACTATCAGACAGTTCACCACAAGCCGCTaGTGTCTCCTTATTGAAGCC | + |
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Preference number: 4 (lower is better) Translates to: RTSSASSDRSKNYRTIRQFTTSR*CLLIEA Trigger: GGCTTCAATAAGGAGACAGCAGCGGCTTGTGGTGAA...CTGTCTGATAGTCCTGTAGTTTTTGCTTCTATCAGAAGAGGCTGAGGACGTTCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| CDS-3UTR TCA 90 bp | TGGCTTGATTGTTATGGTTTTATCAGCCAGCTTTCTTACAGACCACCAGCCCAGTCTTCCACATCCAGATaGAACCCTTTTTCCCGATCT | + |
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Preference number: 4 (lower is better) Translates to: WLDCYGFISQLSYRPPAQSSTSR*NPFSRS Trigger: AGATCGGGAAAAAGGGTTTCATCTGGATGTGGAAGA...CTGGGCTGGTGGTCTGTAAGAAAGCTGGCTGATAAAACCATAACAATCAAGCCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CAA 72 bp | ACTCTAACTTACATGTGTGAGAGCATGCCGGCTCTTTaGCATTCCTGGACTTCCTGGCATTATCTTAACTGC | + |
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Preference number: 4 (lower is better) Translates to: TLTYMCESMPAL*HSWTSWHYLNC Trigger: GCAGTTAAGATAATGCCAGGAAGTCCAGGAATGCAAAAGAGCCGGCATGCTCTCACACATGTAAGTTAGAGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| CDS-3UTR GCA 90 bp | GAGGTATCTAACAGTGATGACTCCCCTTTTTATATAAGTAGTCAGCTTATGATTTCCTCTCGGATGTCCTaGTCGGCAGCCAAAAAGCCC | + |
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Preference number: 4 (lower is better) Translates to: EVSNSDDSPFYISSQLMISSRMS*SAAKKP Trigger: GGGCTTTTTGGCTGCCGAGCAGGACATCCGAGAGGA...AATCATAAGCTGACTACTTATATAAAAAGGGGAGTCATCACTGTTAGATACCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CAA 72 bp | ACATATTGTTTCAGCGCCCCTACCATCTTTGTGGGGTaGAGGTTCAGATGTACACAAGTACATTTATATGTG | + |
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Preference number: 4 (lower is better) Translates to: TYCFSAPTIFVG*RFRCTQVHLYV Trigger: CACATATAAATGTACTTGTGTACATCTGAACCTCAACCCCACAAAGATGGTAGGGGCGCTGAAACAATATGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CAA 72 bp | CTCAACCGAAGTTCTTTCCTCTCAGATGACTTCAGCTaGTGTCAAGCTGACATAAAATTACCAATAGCACTC | + |
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Preference number: 4 (lower is better) Translates to: LNRSSFLSDDFS*CQADIKLPIAL Trigger: GAGTGCTATTGGTAATTTTATGTCAGCTTGACACAAGCTGAAGTCATCTGAGAGGAAAGAACTTCGGTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CAA 72 bp | ACAAGACTTAAGATGGGCAAAATAAAGTTCCCTTGCTaGTCAACCATTTTATTCTCACACTGCATCCAGGCT | + |
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Preference number: 4 (lower is better) Translates to: TRLKMGKIKFPC*STILFSHCIQA Trigger: AGCCTGGATGCAGTGTGAGAATAAAATGGTTGACAAGCAAGGGAACTTTATTTTGCCCATCTTAAGTCTTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| CDS-3UTR CCA 90 bp | AATTGCTATGATATGATTAAATTCCATGACCAAAGCAATCTGGGAAGAAAAGGGGCCTCGACAGTTCACTaGCAAGAATTAAAACTCCTG | + |
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Preference number: 4 (lower is better) Translates to: NCYDMIKFHDQSNLGRKGASTVH*QELKLL Trigger: CAGGAGTTTTAATTCTTGCCAGTGAACTGTCGAGGC...CCCTTTTCTTCCCAGATTGCTTTGGTCATGGAATTTAATCATATCATAGCAATT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| 3UTR CAA 72 bp | CAAGCAAGTCTATCACTAAAAGCTACATCACCAGCCTaGACTTTAATAATTTCAGTTCTACCCCAAGAATGG | + |
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Preference number: 4 (lower is better) Translates to: QASLSLKATSPA*TLIISVLPQEW Trigger: CCATTCTTGGGGTAGAACTGAAATTATTAAAGTCAAGGCTGGTGATGTAGCTTTTAGTGATAGACTTGCTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| CDS-3UTR CCA 90 bp | GAGGTATCTAACAGTGATGACTCCCCTTTTTATATAAGTAGTCAGCTTATGATTTTTCAAGCACCTCTTTaGAATGTCCTGAAATCCAGT | + |
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Preference number: 4 (lower is better) Translates to: EVSNSDDSPFYISSQLMIFQAPL*NVLKSS Trigger: ACTGGATTTCAGGACATTCCAAAGAGGTGCTTGAAA...AATCATAAGCTGACTACTTATATAAAAAGGGGAGTCATCACTGTTAGATACCTC 37% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| CDS GCA 90 bp | CTCTCGGGTCACCAGGGTCTCTGTTTCCAAATATACCACAAATGCTaGCAGGAAGACCAGGCGCTGAAGCACGAACCGCCAATGCTCATG | + |
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Preference number: 5 (lower is better) Translates to: LSGHQGLCFQIYHKC*QEDQALKHEPPMLM Trigger: CATGAGCATTGGCGGTTCGTGCTTCAGCGCCTGGTCTTCCTGGCAGCATTTGTGGTATATTTGGAAACAGAGACCCTGGTGACCCGAGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| CDS-3UTR CAA 90 bp | CTTACTCAAGGAAAGCTCCTCTCCAAGCCAAGAAGTGCATACAGCTCAAAGTGTCCAGCAGTGACACTGTaGACAGACAGCCTCGACAGT | + |
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Preference number: 5 (lower is better) Translates to: LTQGKLLSKPRSAYSSKCPAVTL*TDSLDS Trigger: ACTGTCGAGGCTGTCTGTCAACAGTGTCACTGCTGG...ACACTTTGAGCTGTATGCACTTCTTGGCTTGGAGAGGAGCTTTCCTTGAGTAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| CDS-3UTR CAA 90 bp | CATGCAGACAGTATCTGCATTTACATCAAAGCCCTGGGAGTGACTAGTGTCTTGGCTGCTGTCTCCTTATaGAAGCCTCGGATGGAAAGG | + |
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Preference number: 5 (lower is better) Translates to: HADSICIYIKALGVTSVLAAVSL*KPRMER Trigger: CCTTTCCATCCGAGGCTTCAATAAGGAGACAGCAGC...CAAGACACTAGTCACTCCCAGGGCTTTGATGTAAATGCAGATACTGTCTGCATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| CDS-3UTR CAA 90 bp | AATTGCTATGATATGATTAAATTCCATGACCAAAGCAATCTGGGAAGAAAAGGGTGCTCAGCGGGGAACTaGGTCTTCAGGGACGTGAGA | + |
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Preference number: 5 (lower is better) Translates to: NCYDMIKFHDQSNLGRKGCSAGN*VFRDVR Trigger: TCTCACGTCCCTGAAGACCAAGTTCCCCGCTGAGCA...CCCTTTTCTTCCCAGATTGCTTTGGTCATGGAATTTAATCATATCATAGCAATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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| CDS-3UTR CAA 90 bp | GAGGTATCTAACAGTGATGACTCCCCTTTTTATATAAGTAGTCAGCTTATGATTCTTTCAAGCACCTCTTaGGAATGTCCTGAAATCCAG | + |
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Preference number: 5 (lower is better) Translates to: EVSNSDDSPFYISSQLMILSSTS*ECPEIQ Trigger: CTGGATTTCAGGACATTCCAAAGAGGTGCTTGAAAG...AATCATAAGCTGACTACTTATATAAAAAGGGGAGTCATCACTGTTAGATACCTC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000027623.9 |
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