RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSKU (Mus musculus)

Ensembl gene IDs: ENSMUSG00000049580

Ensembl transcript IDs: ENSMUST00000094161.11, ENSMUST00000164726.8, ENSMUST00000165257.8, ENSMUST00000165901.8, ENSMUST00000167405.3, ENSMUST00000179780.3, ENSMUST00000206414.2

Found 338 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp CCCAGCAGGGGAGGGATGGCAGAGCCCCCAACCTCAGCAGGAGGCTaGGCTCCAAGACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCC +
Preference number: 1 (lower is better)
Translates to: PSRGGMAEPPTSAGG*APRHQVSTFAALGP
Trigger: GGGACCAAGAGCAGCAAACGTGCTCACCTGGTGTCTTGGAGCCCAGCCTCCTGCTGAGGTTGGGGGCTCTGCCATCCCTCCCCTGCTGGG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR TCA 90 bp CAGGGTGGGCTGGGCTGGGCTAGCATGAGAAGGCATAGCTTTCACTaGCTTTCGAGCATCTCTGGGACCAGCCTCAATGCCCACATGGTC +
Preference number: 1 (lower is better)
Translates to: QGGLGWASMRRHSFH*LSSISGTSLNAHMV
Trigger: GACCATGTGGGCATTGAGGCTGGTCCCAGAGATGCTCGAAAGTCAGTGAAAGCTATGCCTTCTCATGCTAGCCCAGCCCAGCCCACCCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000167405.3
3UTR GCA 90 bp GCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATaGGGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTC +
Preference number: 1 (lower is better)
Translates to: APRDLQPSGPESALQ*GRSPTCSPNIMGQV
Trigger: GACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR GCA 90 bp ACTGGGCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTaGAATGCGGGCGCTCACCTACATGTAGTCCAAACATCATGGGTC +
Preference number: 1 (lower is better)
Translates to: TGLQGTFSPVDLSQL*NAGAHLHVVQTSWV
Trigger: GACCCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGCCCAGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR GCA 90 bp CTCAGCAGGAGGCTGGGCTCCAAGACACCAGGTGAGCACGTTTGCTaGTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGAT +
Preference number: 1 (lower is better)
Translates to: LSRRLGSKTPGEHVC*SWSHITIFPTRRVD
Trigger: ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGTCTTGGAGCCCAGCCTCCTGCTGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR GCA 90 bp AACCTCAGCAGGAGGCTGGGCTCCAAGACACCAGGTGAGCACGTTTaGTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTG +
Preference number: 1 (lower is better)
Translates to: NLSRRLGSKTPGEHV*CSWSHITIFPTRRV
Trigger: CACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGTCTTGGAGCCCAGCCTCCTGCTGAGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CCA 90 bp GAAGTAGGCCTCATGGGCCCAGAGCAAAAAGGTGTGACTAGACACTaGGCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTG +
Preference number: 1 (lower is better)
Translates to: EVGLMGPEQKGVTRH*APRDLQPSGPESAL
Trigger: CAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGCCCAGTGTCTAGTCACACCTTTTTGCTCTGGGCCCATGAGGCCTACTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR TCA 90 bp ACAACTCATAAAATGAAGACAGGAAAGAATCCAGGGCTGGAGAGCTaGGATGTGGCCCTGGGGGTGAGCACAGCGTGCCTGGGAGACCCT +
Preference number: 1 (lower is better)
Translates to: TTHKMKTGKNPGLES*DVALGVSTACLGDP
Trigger: AGGGTCTCCCAGGCACGCTGTGCTCACCCCCAGGGCCACATCTCAGCTCTCCAGCCCTGGATTCTTTCCTGTCTTCATTTTATGAGTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR GCA 90 bp GGGCTCAGGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTaGTCAGAGTTCTGGGAGGTGAGCCACTGTGACAAACCGGCAGAT +
Preference number: 1 (lower is better)
Translates to: GLRKGPKSGLASQSL*SEFWEVSHCDKPAD
Trigger: ATCTGCCGGTTTGTCACAGTGGCTCACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCCTGAGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR GCA 90 bp AGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTaGGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGTGACT +
Preference number: 1 (lower is better)
Translates to: RQGPWGKCVRFQSRC*GTPIPEEETDRLVT
Trigger: AGTCACAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR GCA 90 bp GTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATaGTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGTG +
Preference number: 1 (lower is better)
Translates to: VRQGPWGKCVRFQSR*CGTPIPEEETDRLV
Trigger: CACAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CCA 90 bp GCACTTAGGGACAACTGGAGCAGGGCTCAGGAAGGGACCAAAGTCTaGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGAG +
Preference number: 1 (lower is better)
Translates to: ALRDNWSRAQEGTKV*FGITVPLLRVLGGE
Trigger: CTCACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCCTGAGCCCTGCTCCAGTTGTCCCTAAGTGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CCA 90 bp GGCCCCAGGTACAAAAACTATCCTTGGCCCATATCTTTACTGAGATaGCCGCCACTTAGGCCTGTAGACTCTCCACAGGCATTGGCACAT +
Preference number: 1 (lower is better)
Translates to: GPRYKNYPWPISLLR*PPLRPVDSPQALAH
Trigger: ATGTGCCAATGCCTGTGGAGAGTCTACAGGCCTAAGTGGCGGCCATCTCAGTAAAGATATGGGCCAAGGATAGTTTTTGTACCTGGGGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CCA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTaGGAGGTGAGCCACTGTGACAAACCGGCAGATTTTGTTATTGGG +
Preference number: 1 (lower is better)
Translates to: GPKSGLASQSLCSEF*EVSHCDKPADFVIG
Trigger: CCCAATAACAAAATCTGCCGGTTTGTCACAGTGGCTCACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR TCA 90 bp AGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTaGGCCACTGTGACAAACCGGCAGATTTTGTTATTGGGTATAGGC +
Preference number: 1 (lower is better)
Translates to: SLVWHHSPFAQSSGR*ATVTNRQILLLGIG
Trigger: GCCTATACCCAATAACAAAATCTGCCGGTTTGTCACAGTGGCTCACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CCA 90 bp AATGCCCACATGGTCACTGACAGCCAGCTTCTTTCTAAGACCTCCTaGCCCACACCCAGAACAGAGTCTTACAAAAGTGAACAAATAACA +
Preference number: 1 (lower is better)
Translates to: NAHMVTDSQLLSKTS*PTPRTESYKSEQIT
Trigger: TGTTATTTGTTCACTTTTGTAAGACTCTGTTCTGGGTGTGGGCCAGGAGGTCTTAGAAAGAAGCTGGCTGTCAGTGACCATGTGGGCATT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
3UTR TCA 90 bp TTCTCTCTAAGTCCTTCTATTATTAAGATTCTACCCAGGATTCCATaGGAAAAGGAAGAAGTAGGCCTCATGGGCCCAGAGCAAAAAGGT +
Preference number: 1 (lower is better)
Translates to: FSLSPSIIKILPRIP*EKEEVGLMGPEQKG
Trigger: ACCTTTTTGCTCTGGGCCCATGAGGCCTACTTCTTCCTTTTCTCATGGAATCCTGGGTAGAATCTTAATAATAGAAGGACTTAGAGAGAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCGCACTTAGGGACAACTaGAGCAGGGCTCAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: APRDLQPSGPESALQCGRALRDN*SRAQEG
Trigger: CCCTTCCTGAGCCCTGCTCCAGTTGTCCCTAAGTGC...GCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GACTTTCGAGCATCTCTGGGACCAGCCTCAATGCCCACATGGTCACTGACAGCCCCAGCAGGGGAGGGATaGCAGAGCCCCCAACCTCAG +
Preference number: 2 (lower is better)
Translates to: DFRASLGPASMPTWSLTAPAGEG*QSPQPQ
Trigger: CTGAGGTTGGGGGCTCTGCCATCCCTCCCCTGCTGG...GGCTGTCAGTGACCATGTGGGCATTGAGGCTGGTCCCAGAGATGCTCGAAAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 4 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000167405.3
3UTR-3UTR TCA 90 bp GCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCGGAGGTGAGCCACTGTaGCAAACCGGCAGATTTTGT +
Preference number: 2 (lower is better)
Translates to: APRDLQPSGPESALQCGRGGEPL*QTGRFC
Trigger: ACAAAATCTGCCGGTTTGTCACAGTGGCTCACCTCC...GCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTCAGCAGTCTGTCAAGTaGCCTCAGGCCACACCATTC +
Preference number: 2 (lower is better)
Translates to: RDLQPSGPESALQCGRSPQQSVK*PQATPF
Trigger: GAATGGTGTGGCCTGAGGCCACTTGACAGACTGCTG...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCCCAGCAGGGGAGGGATaGCAGAGCCCCCAACCTCAG +
Preference number: 2 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCPAGEG*QSPQPQ
Trigger: CTGAGGTTGGGGGCTCTGCCATCCCTCCCCTGCTGG...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCGAAGGGACCAAAGTCTaGTTTGGCATCACAGTCCCT +
Preference number: 2 (lower is better)
Translates to: APRDLQPSGPESALQCGREGTKV*FGITVP
Trigger: AGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTC...GCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CAA 90 bp CACTGGGCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTaGCAATGCGGGCGCTCACCTACATGTAGTCCAAACATCATGGGT +
Preference number: 2 (lower is better)
Translates to: HWAPRDLQPSGPESA*QCGRSPTCSPNIMG
Trigger: ACCCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGCCCAGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GACTTTCGAGCATCTCTGGGACCAGCCTCAATGCCCACATGGTCACTGACAGCCCAGCAGTCTGTCAAGTaGCCTCAGGCCACACCATTC +
Preference number: 2 (lower is better)
Translates to: DFRASLGPASMPTWSLTAQQSVK*PQATPF
Trigger: GAATGGTGTGGCCTGAGGCCACTTGACAGACTGCTG...GGCTGTCAGTGACCATGTGGGCATTGAGGCTGGTCCCAGAGATGCTCGAAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000167405.3
3UTR-3UTR CCA 90 bp GCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCGACCAAAGTCTGGTTTaGCATCACAGTCCCTTTGCT +
Preference number: 2 (lower is better)
Translates to: APRDLQPSGPESALQCGRDQSLV*HHSPFA
Trigger: AGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTC...GCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp ATGGGCCCAGAGCAAAAAGGTGTGACTAGACACTGGGCTCCAAGGGACCTTCAGGCACTTAGGGACAACTaGAGCAGGGCTCAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: MGPEQKGVTRHWAPRDLQALRDN*SRAQEG
Trigger: CCCTTCCTGAGCCCTGCTCCAGTTGTCCCTAAGTGC...CTGAAGGTCCCTTGGAGCCCAGTGTCTAGTCACACCTTTTTGCTCTGGGCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAACCTCAGCAGGAGGCTaGGCTCCAAGACACCAGGTG +
Preference number: 2 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRTSAGG*APRHQV
Trigger: CACCTGGTGTCTTGGAGCCCAGCCTCCTGCTGAGGT...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GACTTTCGAGCATCTCTGGGACCAGCCTCAATGCCCACATGGTCACTGACAGCCGTCCCTTGGAGCTTGTaGCCAGATGGCCACAATTGC +
Preference number: 2 (lower is better)
Translates to: DFRASLGPASMPTWSLTAVPWSL*PDGHNC
Trigger: GCAATTGTGGCCATCTGGCCACAAGCTCCAAGGGAC...GGCTGTCAGTGACCATGTGGGCATTGAGGCTGGTCCCAGAGATGCTCGAAAGTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000167405.3
3UTR CAA 90 bp TTAGGGACAACTGGAGCAGGGCTCAGGAAGGGACCAAAGTCTGGTTaGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGAGCCAC +
Preference number: 2 (lower is better)
Translates to: LGTTGAGLRKGPKSG*ASQSLCSEFWEVSH
Trigger: GTGGCTCACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCCTGAGCCCTGCTCCAGTTGTCCCTAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR TCA 90 bp TCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGGGAGGTGAGCCACTGTaGCAAACCGGCAGATTTTGT +
Preference number: 2 (lower is better)
Translates to: SSLDAAGLPSQRKKLTGLGGEPL*QTGRFC
Trigger: ACAAAATCTGCCGGTTTGTCACAGTGGCTCACCTCC...CAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp ATGGGCCCAGAGCAAAAAGGTGTGACTAGACACTGGGCTCCAAGGGACCTTCAGCAGCAGTCTGTCAAGTaGCCTCAGGCCACACCATTC +
Preference number: 2 (lower is better)
Translates to: MGPEQKGVTRHWAPRDLQQQSVK*PQATPF
Trigger: GAATGGTGTGGCCTGAGGCCACTTGACAGACTGCTG...CTGAAGGTCCCTTGGAGCCCAGTGTCTAGTCACACCTTTTTGCTCTGGGCCCAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp AGCAGGGCTCAGGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCCAGCAGTCTGTCAAGTaGCCTCAGGCCACACCATTC +
Preference number: 2 (lower is better)
Translates to: SRAQEGTKVWFGITVPLLQQSVK*PQATPF
Trigger: GAATGGTGTGGCCTGAGGCCACTTGACAGACTGCTG...GAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCCTGAGCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp TCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGCTTTGCTCAGAGTTCTaGGAGGTGAGCCACTGTGAC +
Preference number: 2 (lower is better)
Translates to: SSLDAAGLPSQRKKLTGLLCSEF*EVSHCD
Trigger: GTCACAGTGGCTCACCTCCCAGAACTCTGAGCAAAG...CAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCGAAGGGACCAAAGTCTaGTTTGGCATCACAGTCCCT +
Preference number: 2 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSEGTKV*FGITVP
Trigger: AGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTC...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CAA 90 bp TGCCATAAGCTGGCCACCGGACCTAGGGTCCCCACCCATGTGATCTaGTTGTTGCTACTGCTGGGCACAATGGGAAACAGCACAGACAAT +
Preference number: 2 (lower is better)
Translates to: CHKLATGPRVPTHVI*LLLLLGTMGNSTDN
Trigger: ATTGTCTGTGCTGTTTCCCATTGTGCCCAGCAGTAGCAACAACAAGATCACATGGGTGGGGACCCTAGGTCCGGTGGCCAGCTTATGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTCAGCAGTCTGTCAAGTaGCCTCAGGCCACACCATTC +
Preference number: 2 (lower is better)
Translates to: GTKVWFGITVPLLRVLGGQQSVK*PQATPF
Trigger: GAATGGTGTGGCCTGAGGCCACTTGACAGACTGCTG...ACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCGACCAAAGTCTGGTTTaGCATCACAGTCCCTTTGCT +
Preference number: 2 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSDQSLV*HHSPFA
Trigger: AGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTC...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp TCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGGAAGGGACCAAAGTCTaGTTTGGCATCACAGTCCCT +
Preference number: 2 (lower is better)
Translates to: SSLDAAGLPSQRKKLTGLEGTKV*FGITVP
Trigger: AGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTC...CAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GACTTTCGAGCATCTCTGGGACCAGCCTCAATGCCCACATGGTCACTGACAGCCGAAGGGACCAAAGTCTaGTTTGGCATCACAGTCCCT +
Preference number: 2 (lower is better)
Translates to: DFRASLGPASMPTWSLTAEGTKV*FGITVP
Trigger: AGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTC...GGCTGTCAGTGACCATGTGGGCATTGAGGCTGGTCCCAGAGATGCTCGAAAGTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000167405.3
3UTR-3UTR CCA 90 bp CTGAGTCAGCTTTGCAATGCGGGCGCTCACCTACATGTAGTCCAAACATCATGGGCACTTAGGGACAACTaGAGCAGGGCTCAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: LSQLCNAGAHLHVVQTSWALRDN*SRAQEG
Trigger: CCCTTCCTGAGCCCTGCTCCAGTTGTCCCTAAGTGC...CCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATGCACTTAGGGACAACTaGAGCAGGGCTCAGGAAGGG +
Preference number: 2 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDALRDN*SRAQEG
Trigger: CCCTTCCTGAGCCCTGCTCCAGTTGTCCCTAAGTGC...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR TCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAGGAGGTGAGCCACTGTaGCAAACCGGCAGATTTTGT +
Preference number: 2 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRGGEPL*QTGRFC
Trigger: ACAAAATCTGCCGGTTTGTCACAGTGGCTCACCTCC...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR TCA 90 bp GACTTTCGAGCATCTCTGGGACCAGCCTCAATGCCCACATGGTCACTGACAGCCCTACCCAGGATTCCATaGGAAAAGGAAGAAGTAGGC +
Preference number: 2 (lower is better)
Translates to: DFRASLGPASMPTWSLTALPRIP*EKEEVG
Trigger: GCCTACTTCTTCCTTTTCTCATGGAATCCTGGGTAG...GGCTGTCAGTGACCATGTGGGCATTGAGGCTGGTCCCAGAGATGCTCGAAAGTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000167405.3
3UTR-3UTR CCA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCCTTTGCTCAGAGTTCTaGGAGGTGAGCCACTGTGAC +
Preference number: 2 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCLCSEF*EVSHCD
Trigger: GTCACAGTGGCTCACCTCCCAGAACTCTGAGCAAAG...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp ATGGGCCCAGAGCAAAAAGGTGTGACTAGACACTGGGCTCCAAGGGACCTTCAGGAAGGGACCAAAGTCTaGTTTGGCATCACAGTCCCT +
Preference number: 2 (lower is better)
Translates to: MGPEQKGVTRHWAPRDLQEGTKV*FGITVP
Trigger: AGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTC...CTGAAGGTCCCTTGGAGCCCAGTGTCTAGTCACACCTTTTTGCTCTGGGCCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCACGTTTGCTGCTCTTaGTCCCATATTACCATCTTC +
Preference number: 2 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSHVCCS*SHITIF
Trigger: GAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GACTTTCGAGCATCTCTGGGACCAGCCTCAATGCCCACATGGTCACTGACAGCCTGTTGTTGCTACTGCTaGGCACAATGGGAAACAGCA +
Preference number: 2 (lower is better)
Translates to: DFRASLGPASMPTWSLTACCCYC*AQWETA
Trigger: TGCTGTTTCCCATTGTGCCCAGCAGTAGCAACAACA...GGCTGTCAGTGACCATGTGGGCATTGAGGCTGGTCCCAGAGATGCTCGAAAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000167405.3
3UTR-3UTR TCA 90 bp CTGAGTCAGCTTTGCAATGCGGGCGCTCACCTACATGTAGTCCAAACATCATGGGGAGGTGAGCCACTGTaGCAAACCGGCAGATTTTGT +
Preference number: 2 (lower is better)
Translates to: LSQLCNAGAHLHVVQTSWGGEPL*QTGRFC
Trigger: ACAAAATCTGCCGGTTTGTCACAGTGGCTCACCTCC...CCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR TCA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAGGAGGTGAGCCACTGTaGCAAACCGGCAGATTTTGT +
Preference number: 2 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTGGEPL*QTGRFC
Trigger: ACAAAATCTGCCGGTTTGTCACAGTGGCTCACCTCC...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp CTGAGTCAGCTTTGCAATGCGGGCGCTCACCTACATGTAGTCCAAACATCATGGCTTTGCTCAGAGTTCTaGGAGGTGAGCCACTGTGAC +
Preference number: 2 (lower is better)
Translates to: LSQLCNAGAHLHVVQTSWLCSEF*EVSHCD
Trigger: GTCACAGTGGCTCACCTCCCAGAACTCTGAGCAAAG...CCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAAGGGAAGGCACTTAGGGACCTTTGCTCAGAGTTCTaGGAGGTGAGCCACTGTGAC +
Preference number: 2 (lower is better)
Translates to: VQTSWVRSVQTKGKALRDLCSEF*EVSHCD
Trigger: GTCACAGTGGCTCACCTCCCAGAACTCTGAGCAAAG...GTCCCTAAGTGCCTTCCCTTTTGTCTGGACTGACCTGACCCATGATGTTTGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp AGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGGAAGGGACCAAAGTCTaGTTTGGCATCACAGTCCCT +
Preference number: 2 (lower is better)
Translates to: STFAALGPILPSSPQGGWEGTKV*FGITVP
Trigger: AGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTC...CCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTACTCTCCACAGGCATTaGCACATTAAAATATTAGTG +
Preference number: 2 (lower is better)
Translates to: RDLQPSGPESALQCGRSPTLHRH*HIKILV
Trigger: CACTAATATTTTAATGTGCCAATGCCTGTGGAGAGT...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCGACCAAAGTCTGGTTTaGCATCACAGTCCCTTTGCT +
Preference number: 2 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCDQSLV*HHSPFA
Trigger: AGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTC...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAGACCAAAGTCTGGTTTaGCATCACAGTCCCTTTGCT +
Preference number: 2 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRDQSLV*HHSPFA
Trigger: AGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTC...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAGAAGGGACCAAAGTCTaGTTTGGCATCACAGTCCCT +
Preference number: 2 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTEGTKV*FGITVP
Trigger: AGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTC...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGATGTTGTTGCTACTGCTaGGCACAATGGGAAACAGCA +
Preference number: 2 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRCCCYC*AQWETA
Trigger: TGCTGTTTCCCATTGTGCCCAGCAGTAGCAACAACA...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR TCA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACACTACCCAGGATTCCATaGGAAAAGGAAGAAGTAGGC +
Preference number: 2 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTLPRIP*EKEEVG
Trigger: GCCTACTTCTTCCTTTTCTCATGGAATCCTGGGTAG...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR GCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGATCTTGTTGTTGCTACTaGTGGGCACAATGGGAAACA +
Preference number: 2 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRSCCCY*WAQWET
Trigger: TGTTTCCCATTGTGCCCAGCAGTAGCAACAACAAGA...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR GCA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTCTTGTTGTTGCTACTaGTGGGCACAATGGGAAACA +
Preference number: 2 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCSCCCY*WAQWET
Trigger: TGTTTCCCATTGTGCCCAGCAGTAGCAACAACAAGA...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCACTCTCCACAGGCATTaGCACATTAAAATATTAGTG +
Preference number: 2 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSTLHRH*HIKILV
Trigger: CACTAATATTTTAATGTGCCAATGCCTGTGGAGAGT...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGACACGTTTGCTGCTCTTaGTCCCATATTACCATCTTC +
Preference number: 2 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRHVCCS*SHITIF
Trigger: GAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp ATGGGCCCAGAGCAAAAAGGTGTGACTAGACACTGGGCTCCAAGGGACCTTCAGACTCTCCACAGGCATTaGCACATTAAAATATTAGTG +
Preference number: 2 (lower is better)
Translates to: MGPEQKGVTRHWAPRDLQTLHRH*HIKILV
Trigger: CACTAATATTTTAATGTGCCAATGCCTGTGGAGAGT...CTGAAGGTCCCTTGGAGCCCAGTGTCTAGTCACACCTTTTTGCTCTGGGCCCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCACTCTCCACAGGCATTaGCACATTAAAATATTAGTG +
Preference number: 2 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCTLHRH*HIKILV
Trigger: CACTAATATTTTAATGTGCCAATGCCTGTGGAGAGT...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATACTCTCCACAGGCATTaGCACATTAAAATATTAGTG +
Preference number: 2 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDTLHRH*HIKILV
Trigger: CACTAATATTTTAATGTGCCAATGCCTGTGGAGAGT...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CCA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAACTCTCCACAGGCATTaGCACATTAAAATATTAGTG +
Preference number: 2 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKTLHRH*HIKILV
Trigger: CACTAATATTTTAATGTGCCAATGCCTGTGGAGAGT...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CCA 72 bp CTCATGGGCCCAGAGCAAAAAGGTGTGACTAGACACTaGGCTCCAAGGGACCTTCAGCCCAGTGGACCTGAG +
Preference number: 3 (lower is better)
Translates to: LMGPEQKGVTRH*APRDLQPSGPE
Trigger: CTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGCCCAGTGTCTAGTCACACCTTTTTGCTCTGGGCCCATGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR TCA 72 bp AAAATGAAGACAGGAAAGAATCCAGGGCTGGAGAGCTaGGATGTGGCCCTGGGGGTGAGCACAGCGTGCCTG +
Preference number: 3 (lower is better)
Translates to: KMKTGKNPGLES*DVALGVSTACL
Trigger: CAGGCACGCTGTGCTCACCCCCAGGGCCACATCTCAGCTCTCCAGCCCTGGATTCTTTCCTGTCTTCATTTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR GCA 72 bp CCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTaGGGGACTCCCATCCCAGAGGAAGAAACTGACAGG +
Preference number: 3 (lower is better)
Translates to: PWGKCVRFQSRC*GTPIPEEETDR
Trigger: CCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR GCA 72 bp GGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATaGTGCGGGACTCCCATCCCAGAGGAAGAAACTGAC +
Preference number: 3 (lower is better)
Translates to: GPWGKCVRFQSR*CGTPIPEEETD
Trigger: GTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CCA 72 bp CTGGAGCAGGGCTCAGGAAGGGACCAAAGTCTGGTTTaGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGG +
Preference number: 3 (lower is better)
Translates to: LEQGSGRDQSLV*HHSPFAQSSGR
Trigger: CCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCCTGAGCCCTGCTCCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR TCA 72 bp CAACCTCAGCAGGAGGCTGGGCTCCAAGACACCAGGTaGGCACGTTTGCTGCTCTTGGTCCCATATTACCAT +
Preference number: 3 (lower is better)
Translates to: QPQQEAGLQDTR*ARLLLLVPYYH
Trigger: ATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGTCTTGGAGCCCAGCCTCCTGCTGAGGTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR TCA 72 bp ATAAGCTGGCCACCGGACCTAGGGTCCCCACCCATGTaGTCTTGTTGTTGCTACTGCTGGGCACAATGGGAA +
Preference number: 3 (lower is better)
Translates to: ISWPPDLGSPPM*SCCCYCWAQWE
Trigger: TTCCCATTGTGCCCAGCAGTAGCAACAACAAGATCACATGGGTGGGGACCCTAGGTCCGGTGGCCAGCTTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR GCA 72 bp CAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTaGAATGCGGGCGCTCACCTACATGTAGTCCAAACA +
Preference number: 3 (lower is better)
Translates to: QGTFSPVDLSQL*NAGAHLHVVQT
Trigger: TGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR GCA 72 bp AGGCTGGGCTCCAAGACACCAGGTGAGCACGTTTGCTaGTCTTGGTCCCATATTACCATCTTCCCCACAAGG +
Preference number: 3 (lower is better)
Translates to: RLGSKTPGEHVC*SWSHITIFPTR
Trigger: CCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGTCTTGGAGCCCAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR GCA 72 bp AGGAGGCTGGGCTCCAAGACACCAGGTGAGCACGTTTaGTGCTCTTGGTCCCATATTACCATCTTCCCCACA +
Preference number: 3 (lower is better)
Translates to: RRLGSKTPGEHV*CSWSHITIFPT
Trigger: TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGTCTTGGAGCCCAGCCTCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CCA 72 bp GGCTCCAAGACACCAGGTGAGCACGTTTGCTGCTCTTaGTCCCATATTACCATCTTCCCCACAAGGAGGGTG +
Preference number: 3 (lower is better)
Translates to: GSKTPGEHVCCS*SHITIFPTRRV
Trigger: CACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGTCTTGGAGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CAA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGACCCACCCATGTGATCTaGTTGTTGCTACTGCTGGGC +
Preference number: 3 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRPTHVI*LLLLLG
Trigger: GCCCAGCAGTAGCAACAACAAGATCACATGGGTGGG...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR GCA 72 bp GACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATaGGGGCGCTCACCTACATGTAGTCCAAACATCATG +
Preference number: 3 (lower is better)
Translates to: DLQPSGPESALQ*GRSPTCSPNIM
Trigger: CATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR TCA 72 bp CACAGGCATTGGCACATTAAAATATTAGTGGGGACCTaGGCAAGCCCAGGCAGCAGTCTGTCAAGTGGCCTC +
Preference number: 3 (lower is better)
Translates to: HRHWHIKILVGT*ASPGSSLSSGL
Trigger: GAGGCCACTTGACAGACTGCTGCCTGGGCTTGCTCAGGTCCCCACTAATATTTTAATGTGCCAATGCCTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR TCA 72 bp GGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGTaGCTGAGGTGTTCCAAGCTTCCTGAGGCTCTGAAA +
Preference number: 3 (lower is better)
Translates to: GLPSQRKKLTGL*LRCSKLPEALK
Trigger: TTTCAGAGCCTCAGGAAGCTTGGAACACCTCAGTCACAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR-3UTR CAA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAACCCATGTGATCTTGTaGTTGCTACTGCTGGGCACA +
Preference number: 3 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRTHVIL*LLLLGT
Trigger: TGTGCCCAGCAGTAGCAACAACAAGATCACATGGGT...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR GCA 72 bp AAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTaGTCAGAGTTCTGGGAGGTGAGCCACTGTGACAAA +
Preference number: 3 (lower is better)
Translates to: KGPKSGLASQSL*SEFWEVSHCDK
Trigger: TTTGTCACAGTGGCTCACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CCA 72 bp TCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTaGGAGGTGAGCCACTGTGACAAACCGGCAGATTTT +
Preference number: 3 (lower is better)
Translates to: SGLASQSLCSEF*EVSHCDKPADF
Trigger: AAAATCTGCCGGTTTGTCACAGTGGCTCACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CCA 72 bp AATGCGGGCGCTCACCTACATGTAGTCCAAACATCATaGGTCAGGTCAGTCCAGACAAAAGGGAAGGCACTT +
Preference number: 3 (lower is better)
Translates to: NAGAHLHVVQTS*VRSVQTKGKAL
Trigger: AAGTGCCTTCCCTTTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CCA 72 bp TACAAAAACTATCCTTGGCCCATATCTTTACTGAGATaGCCGCCACTTAGGCCTGTAGACTCTCCACAGGCA +
Preference number: 3 (lower is better)
Translates to: YKNYPWPISLLR*PPLRPVDSPQA
Trigger: TGCCTGTGGAGAGTCTACAGGCCTAAGTGGCGGCCATCTCAGTAAAGATATGGGCCAAGGATAGTTTTTGTA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CCA 72 bp ATGGTCACTGACAGCCAGCTTCTTTCTAAGACCTCCTaGCCCACACCCAGAACAGAGTCTTACAAAAGTGAA +
Preference number: 3 (lower is better)
Translates to: MVTDSQLLSKTS*PTPRTESYKSE
Trigger: TTCACTTTTGTAAGACTCTGTTCTGGGTGTGGGCCAGGAGGTCTTAGAAAGAAGCTGGCTGTCAGTGACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
CDS-3UTR GCA 90 bp GCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCGGGGGCCCAGGCTGCTaGAGTCCACACGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: APRDLQPSGPESALQCGRGGPGC*SPHGSG
Trigger: GCCTGATCCGTGTGGACTGCAGCAGCCTGGGCCCCC...GCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGC
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTCTGCAGGCTGGCCAGTaGCAGGTGGGTGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: RDLQPSGPESALQCGRSPLQAGQ*QVGEAC
Trigger: GCAGGCCTCACCCACCTGTCACTGGCCAGCCTGCAG...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTGGGGGCCCAGGCTGCTaGAGTCCACACGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: RDLQPSGPESALQCGRSPGGPGC*SPHGSG
Trigger: GCCTGATCCGTGTGGACTGCAGCAGCCTGGGCCCCC...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCCTCTGCCGGCAGGGCTaGCAGGCCATTGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: APRDLQPSGPESALQCGRLCRQG*QAIVAE
Trigger: CTCAGCCACAATGGCCTGGCAGCCCTGCCGGCAGAG...GCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCACCAGGCGCCGGCACTaGACATCCTGGCCTACGCTG +
Preference number: 4 (lower is better)
Translates to: APRDLQPSGPESALQCGRTRRRH*TSWPTL
Trigger: CAGCGTAGGCCAGGATGTGCAGTGCCGGCGCCTGGT...GCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTCTGGCCAGTGACAGGTaGGTGAGGCCTGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: RDLQPSGPESALQCGRSPLASDR*VRPASP
Trigger: GGGGCTGGCAGGCCTCACCCACCTGTCACTGGCCAG...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTGACAAGTCCAGGACCTaGAGGCCTGGGAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: RDLQPSGPESALQCGRSPDKSRT*RPGSSR
Trigger: CCGGGAGCTCCCAGGCCTTCAGGTCCTGGACTTGTC...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCTGGCCAGTGACAGGTaGGTGAGGCCTGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSLASDR*VRPASP
Trigger: GGGGCTGGCAGGCCTCACCCACCTGTCACTGGCCAG...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTCAGGACCTGAAGGCCTaGGAGCTCCCGGAAGCCGTG +
Preference number: 4 (lower is better)
Translates to: RDLQPSGPESALQCGRSPQDLKA*ELPEAV
Trigger: CACGGCTTCCGGGAGCTCCCAGGCCTTCAGGTCCTG...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp TCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGCTGCAGGCTGGCCAGTaGCAGGTGGGTGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SSLDAAGLPSQRKKLTGLLQAGQ*QVGEAC
Trigger: GCAGGCCTCACCCACCTGTCACTGGCCAGCCTGCAG...CAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTGCTGGTGAAAATCTCTaGCGGCAGGGCTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: RDLQPSGPESALQCGRSPAGENL*RQGCQA
Trigger: GGCCTGGCAGCCCTGCCGGCAGAGATTTTCACCAGC...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCGTGGTAGATGGAGGATaGCCTGCAGGCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: APRDLQPSGPESALQCGRVVDGG*PAGWPV
Trigger: CACTGGCCAGCCTGCAGGGCATCCTCCATCTACCAC...GCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCACCAGGCGCCGGCACTaGACATCCTGGCCTACGCTG +
Preference number: 4 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSTRRRH*TSWPTL
Trigger: CAGCGTAGGCCAGGATGTGCAGTGCCGGCGCCTGGT...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTCCAGGCCAGCCAGTGTaGTATAGCCTGGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: RDLQPSGPESALQCGRSPPGQPV*YSLALP
Trigger: TGGCAGGGCCAGGCTATACCACACTGGCTGGCCTGG...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GACTTTCGAGCATCTCTGGGACCAGCCTCAATGCCCACATGGTCACTGACAGCCGACAAGTCCAGGACCTaGAGGCCTGGGAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: DFRASLGPASMPTWSLTADKSRT*RPGSSR
Trigger: CCGGGAGCTCCCAGGCCTTCAGGTCCTGGACTTGTC...GGCTGTCAGTGACCATGTGGGCATTGAGGCTGGTCCCAGAGATGCTCGAAAGTC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000167405.3
CDS-3UTR GCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCGCTGGTGAAAATCTCTaGCGGCAGGGCTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSAGENL*RQGCQA
Trigger: GGCCTGGCAGCCCTGCCGGCAGAGATTTTCACCAGC...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp TCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGTGGGATAGGTCCACGTaGAGTGCCCGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: SSLDAAGLPSQRKKLTGLWDRST*SARPWL
Trigger: CAGCCAGGGCCGGGCACTGCACGTGGACCTATCCCA...CAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTGTGGTAGATGGAGGATaGCCTGCAGGCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: RDLQPSGPESALQCGRSPVVDGG*PAGWPV
Trigger: CACTGGCCAGCCTGCAGGGCATCCTCCATCTACCAC...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp TCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGACCAGGCGCCGGCACTaGACATCCTGGCCTACGCTG +
Preference number: 4 (lower is better)
Translates to: SSLDAAGLPSQRKKLTGLTRRRH*TSWPTL
Trigger: CAGCGTAGGCCAGGATGTGCAGTGCCGGCGCCTGGT...CAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GACTTTCGAGCATCTCTGGGACCAGCCTCAATGCCCACATGGTCACTGACAGCCGGCACAGGCACAATGTaGGGGCCCAGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: DFRASLGPASMPTWSLTAGTGTM*GPRLLQ
Trigger: CTGCAGCAGCCTGGGCCCCCACATTGTGCCTGTGCC...GGCTGTCAGTGACCATGTGGGCATTGAGGCTGGTCCCAGAGATGCTCGAAAGTC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000167405.3
CDS-3UTR CCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCCAGGCCAGCCAGTGTaGTATAGCCTGGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSPGQPV*YSLALP
Trigger: TGGCAGGGCCAGGCTATACCACACTGGCTGGCCTGG...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCGCTGCCAGGCCATTGTaGCTGAGGTCAAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: APRDLQPSGPESALQCGRAARPL*LRSSDS
Trigger: GGAGTCACTTGACCTCAGCCACAATGGCCTGGCAGC...GCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCGCCCGGCCCTGGCTGTaGGTGGTGAAGGCAGATATC +
Preference number: 4 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSARPWL*VVKADI
Trigger: GATATCTGCCTTCACCACCCACAGCCAGGGCCGGGC...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCCGTGGGGTGGTAGATaGAGGATGCCCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSPWGGR*RMPCRL
Trigger: CAGCCTGCAGGGCATCCTCCATCTACCACCCCACGG...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp TCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGCAGGACCTGAAGGCCTaGGAGCTCCCGGAAGCCGTG +
Preference number: 4 (lower is better)
Translates to: SSLDAAGLPSQRKKLTGLQDLKA*ELPEAV
Trigger: CACGGCTTCCGGGAGCTCCCAGGCCTTCAGGTCCTG...CAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTCCAGGCCATTGTGGCTaGGGTCAAGTGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RDLQPSGPESALQCGRSPPGHCG*GQVTPG
Trigger: ACCTGGAGTCACTTGACCTCAGCCACAATGGCCTGG...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTCCTGGCTGTGGGTGGTaGAGGCAGATATCGAGACCT +
Preference number: 4 (lower is better)
Translates to: RDLQPSGPESALQCGRSPPGCGW*RQISRP
Trigger: AGGTCTCGATATCTGCCTTCACCACCCACAGCCAGG...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTGACAGGTTCAGGCTCTaGATGGTAGGTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: RDLQPSGPESALQCGRSPDRFRL*MVGAGR
Trigger: CCTGCCTGCACCTACCATTCAGAGCCTGAACCTGTC...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGCTGCAGGCTGGCCAGTaGCAGGTGGGTGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: STFAALGPILPSSPQGGWLQAGQ*QVGEAC
Trigger: GCAGGCCTCACCCACCTGTCACTGGCCAGCCTGCAG...CCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCCTGCAGGCTGGCCAGTaGCAGGTGGGTGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCLQAGQ*QVGEAC
Trigger: GCAGGCCTCACCCACCTGTCACTGGCCAGCCTGCAG...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGCTGCAGGCTGGCCAGTaGCAGGTGGGTGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: GPKSGLASQSLCSEFWEVLQAGQ*QVGEAC
Trigger: GCAGGCCTCACCCACCTGTCACTGGCCAGCCTGCAG...CACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp ATGGGCCCAGAGCAAAAAGGTGTGACTAGACACTGGGCTCCAAGGGACCTTCAGGACAAGTCCAGGACCTaGAGGCCTGGGAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: MGPEQKGVTRHWAPRDLQDKSRT*RPGSSR
Trigger: CCGGGAGCTCCCAGGCCTTCAGGTCCTGGACTTGTC...CTGAAGGTCCCTTGGAGCCCAGTGTCTAGTCACACCTTTTTGCTCTGGGCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGGGGGGCCCAGGCTGCTaGAGTCCACACGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: GRDQSLVWHHSPFAQSSGGGPGC*SPHGSG
Trigger: GCCTGATCCGTGTGGACTGCAGCAGCCTGGGCCCCC...CCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCC
60% GC, longest homopolymer 8 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp AGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGGGGGGCCCAGGCTGCTaGAGTCCACACGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: STFAALGPILPSSPQGGWGGPGC*SPHGSG
Trigger: GCCTGATCCGTGTGGACTGCAGCAGCCTGGGCCCCC...CCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCT
60% GC, longest homopolymer 7 nt, total homopolymer stretches 11 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGGGGGGCCCAGGCTGCTaGAGTCCACACGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: GPKSGLASQSLCSEFWEVGGPGC*SPHGSG
Trigger: GCCTGATCCGTGTGGACTGCAGCAGCCTGGGCCCCC...CACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
60% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp ATGGGCCCAGAGCAAAAAGGTGTGACTAGACACTGGGCTCCAAGGGACCTTCAGCTCTGCCGGCAGGGCTaGCAGGCCATTGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: MGPEQKGVTRHWAPRDLQLCRQG*QAIVAE
Trigger: CTCAGCCACAATGGCCTGGCAGCCCTGCCGGCAGAG...CTGAAGGTCCCTTGGAGCCCAGTGTCTAGTCACACCTTTTTGCTCTGGGCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp ATGGGCCCAGAGCAAAAAGGTGTGACTAGACACTGGGCTCCAAGGGACCTTCAGTGGGATAGGTCCACGTaGAGTGCCCGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: MGPEQKGVTRHWAPRDLQWDRST*SARPWL
Trigger: CAGCCAGGGCCGGGCACTGCACGTGGACCTATCCCA...CTGAAGGTCCCTTGGAGCCCAGTGTCTAGTCACACCTTTTTGCTCTGGGCCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGCTGGCCAGTGACAGGTaGGTGAGGCCTGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GRDQSLVWHHSPFAQSSGLASDR*VRPASP
Trigger: GGGGCTGGCAGGCCTCACCCACCTGTCACTGGCCAG...CCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCCTGGCAGCAGATTCCTaGGTGTCTCCACAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: APRDLQPSGPESALQCGRLAADS*VSPQCR
Trigger: CCTACACTGTGGAGACACCCAGGAATCTGCTGCCAG...GCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCCAGGCCATTGTGGCTaGGGTCAAGTGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSPGHCG*GQVTPG
Trigger: ACCTGGAGTCACTTGACCTCAGCCACAATGGCCTGG...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCGGTTATGGCTCAGATTaGTGTCACTCAAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: APRDLQPSGPESALQCGRGYGSD*CHSRGS
Trigger: GCTCCCCCTTGAGTGACATCAATCTGAGCCATAACC...GCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCGACAGGTTCAGGCTCTaGATGGTAGGTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSDRFRL*MVGAGR
Trigger: CCTGCCTGCACCTACCATTCAGAGCCTGAACCTGTC...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACACTGCAGGCTGGCCAGTaGCAGGTGGGTGAGGCCTGC +
Preference number: 4 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTLQAGQ*QVGEAC
Trigger: GCAGGCCTCACCCACCTGTCACTGGCCAGCCTGCAG...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp TCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGCAGCTCCTGCCCACTTaGGCTTGGGGTTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: SSLDAAGLPSQRKKLTGLQLLPT*AWGCLT
Trigger: TGTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTG...CAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GACTTTCGAGCATCTCTGGGACCAGCCTCAATGCCCACATGGTCACTGACAGCCCAGCTCCTGCCCACTTaGGCTTGGGGTTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: DFRASLGPASMPTWSLTAQLLPT*AWGCLT
Trigger: TGTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTG...GGCTGTCAGTGACCATGTGGGCATTGAGGCTGGTCCCAGAGATGCTCGAAAGTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000167405.3
CDS-3UTR TCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGCAAACCCAGGCCTaGAAACACCTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSQQTQA*KHLSSC
Trigger: GCAGGAGCTGAGGTGTTTTCAGGCCTGGGTTTGCTG...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATGGGGGCCCAGGCTGCTaGAGTCCACACGGATCAGGC +
Preference number: 4 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDGGPGC*SPHGSG
Trigger: GCCTGATCCGTGTGGACTGCAGCAGCCTGGGCCCCC...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTCTCTGCCGGCAGGGCTaGCAGGCCATTGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GTKVWFGITVPLLRVLGGLCRQG*QAIVAE
Trigger: CTCAGCCACAATGGCCTGGCAGCCCTGCCGGCAGAG...ACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGACTCTGCCGGCAGGGCTaGCAGGCCATTGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRLCRQG*QAIVAE
Trigger: CTCAGCCACAATGGCCTGGCAGCCCTGCCGGCAGAG...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGTGGGATAGGTCCACGTaGAGTGCCCGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GPKSGLASQSLCSEFWEVWDRST*SARPWL
Trigger: CAGCCAGGGCCGGGCACTGCACGTGGACCTATCCCA...CACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCAAACACCTCAGCTCCTaGCCACTTGAGCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: APRDLQPSGPESALQCGRKHLSS*PLELGV
Trigger: AACCCCAAGCTCAAGTGGGCAGGAGCTGAGGTGTTT...GCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAACCAGGCGCCGGCACTaGACATCCTGGCCTACGCTG +
Preference number: 4 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRTRRRH*TSWPTL
Trigger: CAGCGTAGGCCAGGATGTGCAGTGCCGGCGCCTGGT...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp AGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGACCAGGCGCCGGCACTaGACATCCTGGCCTACGCTG +
Preference number: 4 (lower is better)
Translates to: STFAALGPILPSSPQGGWTRRRH*TSWPTL
Trigger: CAGCGTAGGCCAGGATGTGCAGTGCCGGCGCCTGGT...CCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCACCAGGCGCCGGCACTaGACATCCTGGCCTACGCTG +
Preference number: 4 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCTRRRH*TSWPTL
Trigger: CAGCGTAGGCCAGGATGTGCAGTGCCGGCGCCTGGT...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAGGCACAGGCACAATGTaGGGGCCCAGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRGTGTM*GPRLLQ
Trigger: CTGCAGCAGCCTGGGCCCCCACATTGTGCCTGTGCC...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCGGCACAGGCACAATGTaGGGGCCCAGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCGTGTM*GPRLLQ
Trigger: CTGCAGCAGCCTGGGCCCCCACATTGTGCCTGTGCC...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp AGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGGGCACAGGCACAATGTaGGGGCCCAGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: STFAALGPILPSSPQGGWGTGTM*GPRLLQ
Trigger: CTGCAGCAGCCTGGGCCCCCACATTGTGCCTGTGCC...CCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCGCTGCCAGGCCATTGTaGCTGAGGTCAAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSAARPL*LRSSDS
Trigger: GGAGTCACTTGACCTCAGCCACAATGGCCTGGCAGC...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp ATGGGCCCAGAGCAAAAAGGTGTGACTAGACACTGGGCTCCAAGGGACCTTCAGGCCCGGCCCTGGCTGTaGGTGGTGAAGGCAGATATC +
Preference number: 4 (lower is better)
Translates to: MGPEQKGVTRHWAPRDLQARPWL*VVKADI
Trigger: GATATCTGCCTTCACCACCCACAGCCAGGGCCGGGC...CTGAAGGTCCCTTGGAGCCCAGTGTCTAGTCACACCTTTTTGCTCTGGGCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp AGCAGGGCTCAGGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCCTGGCCCGGGCTGGATaGGGAAGCAGGCGATGGATA +
Preference number: 4 (lower is better)
Translates to: SRAQEGTKVWFGITVPLLLARAG*GSRRWI
Trigger: TATCCATCGCCTGCTTCCCCATCCAGCCCGGGCCAG...GAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCCTGAGCCCTGCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATCTGGCCAGTGACAGGTaGGTGAGGCCTGCCAGCCCC +
Preference number: 4 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDLASDR*VRPASP
Trigger: GGGGCTGGCAGGCCTCACCCACCTGTCACTGGCCAG...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp ATGGGCCCAGAGCAAAAAGGTGTGACTAGACACTGGGCTCCAAGGGACCTTCAGCCGTGGGGTGGTAGATaGAGGATGCCCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: MGPEQKGVTRHWAPRDLQPWGGR*RMPCRL
Trigger: CAGCCTGCAGGGCATCCTCCATCTACCACCCCACGG...CTGAAGGTCCCTTGGAGCCCAGTGTCTAGTCACACCTTTTTGCTCTGGGCCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGCAGGACCTGAAGGCCTaGGAGCTCCCGGAAGCCGTG +
Preference number: 4 (lower is better)
Translates to: GPKSGLASQSLCSEFWEVQDLKA*ELPEAV
Trigger: CACGGCTTCCGGGAGCTCCCAGGCCTTCAGGTCCTG...CACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGCAGGACCTGAAGGCCTaGGAGCTCCCGGAAGCCGTG +
Preference number: 4 (lower is better)
Translates to: GRDQSLVWHHSPFAQSSGQDLKA*ELPEAV
Trigger: CACGGCTTCCGGGAGCTCCCAGGCCTTCAGGTCCTG...CCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTCAGGACCTGAAGGCCTaGGAGCTCCCGGAAGCCGTG +
Preference number: 4 (lower is better)
Translates to: GTKVWFGITVPLLRVLGGQDLKA*ELPEAV
Trigger: CACGGCTTCCGGGAGCTCCCAGGCCTTCAGGTCCTG...ACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGCAGGGCTCAGGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCGTGGCTGAGGTCAAGTaGCTCCAGGTAGCGCAGTCG +
Preference number: 4 (lower is better)
Translates to: SRAQEGTKVWFGITVPLLVAEVK*LQVAQS
Trigger: CGACTGCGCTACCTGGAGTCACTTGACCTCAGCCAC...GAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCCTGAGCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GACTTTCGAGCATCTCTGGGACCAGCCTCAATGCCCACATGGTCACTGACAGCCCCAGGCCATTGTGGCTaGGGTCAAGTGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: DFRASLGPASMPTWSLTAPGHCG*GQVTPG
Trigger: ACCTGGAGTCACTTGACCTCAGCCACAATGGCCTGG...GGCTGTCAGTGACCATGTGGGCATTGAGGCTGGTCCCAGAGATGCTCGAAAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000167405.3
CDS-3UTR TCA 90 bp TCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGGACAGGTTCAGGCTCTaGATGGTAGGTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: SSLDAAGLPSQRKKLTGLDRFRL*MVGAGR
Trigger: CCTGCCTGCACCTACCATTCAGAGCCTGAACCTGTC...CAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAGACAAGTCCAGGACCTaGAGGCCTGGGAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTDKSRT*RPGSSR
Trigger: CCGGGAGCTCCCAGGCCTTCAGGTCCTGGACTTGTC...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp CTGAGTCAGCTTTGCAATGCGGGCGCTCACCTACATGTAGTCCAAACATCATGGGACAAGTCCAGGACCTaGAGGCCTGGGAGCTCCCGG +
Preference number: 4 (lower is better)
Translates to: LSQLCNAGAHLHVVQTSWDKSRT*RPGSSR
Trigger: CCGGGAGCTCCCAGGCCTTCAGGTCCTGGACTTGTC...CCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp TCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGGAGCTTGGGGTTGCCTaGCAAGTCCAGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: SSLDAAGLPSQRKKLTGLELGVA*QVQDLK
Trigger: CTTCAGGTCCTGGACTTGTCAGGCAACCCCAAGCTC...CAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp TCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGCAGCAAACCCAGGCCTaGAAACACCTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: SSLDAAGLPSQRKKLTGLQQTQA*KHLSSC
Trigger: GCAGGAGCTGAGGTGTTTTCAGGCCTGGGTTTGCTG...CAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCGAGTCGTCTGCACTCTaGCCACGGCCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCESSAL*PRPAAA
Trigger: TGCTGCTGCTGGCCGTGGGCAGAGTGCAGACGACTC...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGGAGTCGTCTGCACTCTaGCCACGGCCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GPKSGLASQSLCSEFWEVESSAL*PRPAAA
Trigger: TGCTGCTGCTGGCCGTGGGCAGAGTGCAGACGACTC...CACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp AGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGGAGTCGTCTGCACTCTaGCCACGGCCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: STFAALGPILPSSPQGGWESSAL*PRPAAA
Trigger: TGCTGCTGCTGGCCGTGGGCAGAGTGCAGACGACTC...CCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAACTCTGCCGGCAGGGCTaGCAGGCCATTGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKLCRQG*QAIVAE
Trigger: CTCAGCCACAATGGCCTGGCAGCCCTGCCGGCAGAG...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAAGGGAAGGCACTTAGGGACCTCTGCCGGCAGGGCTaGCAGGCCATTGTGGCTGAG +
Preference number: 4 (lower is better)
Translates to: VQTSWVRSVQTKGKALRDLCRQG*QAIVAE
Trigger: CTCAGCCACAATGGCCTGGCAGCCCTGCCGGCAGAG...GTCCCTAAGTGCCTTCCCTTTTGTCTGGACTGACCTGACCCATGATGTTTGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAGCTGGTGAAAATCTCTaGCGGCAGGGCTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRAGENL*RQGCQA
Trigger: GGCCTGGCAGCCCTGCCGGCAGAGATTTTCACCAGC...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGCTGGTGAAAATCTCTaGCGGCAGGGCTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: GTKVWFGITVPLLRVLGGAGENL*RQGCQA
Trigger: GGCCTGGCAGCCCTGCCGGCAGAGATTTTCACCAGC...ACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATTGGGATAGGTCCACGTaGAGTGCCCGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDWDRST*SARPWL
Trigger: CAGCCAGGGCCGGGCACTGCACGTGGACCTATCCCA...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp CTGAGTCAGCTTTGCAATGCGGGCGCTCACCTACATGTAGTCCAAACATCATGGTGGGATAGGTCCACGTaGAGTGCCCGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LSQLCNAGAHLHVVQTSWWDRST*SARPWL
Trigger: CAGCCAGGGCCGGGCACTGCACGTGGACCTATCCCA...CCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAATGGGATAGGTCCACGTaGAGTGCCCGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKWDRST*SARPWL
Trigger: CAGCCAGGGCCGGGCACTGCACGTGGACCTATCCCA...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTAAACACCTCAGCTCCTaGCCACTTGAGCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: RDLQPSGPESALQCGRSPKHLSS*PLELGV
Trigger: AACCCCAAGCTCAAGTGGGCAGGAGCTGAGGTGTTT...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATACCAGGCGCCGGCACTaGACATCCTGGCCTACGCTG +
Preference number: 4 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDTRRRH*TSWPTL
Trigger: CAGCGTAGGCCAGGATGTGCAGTGCCGGCGCCTGGT...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAGGCACAGGCACAATGTaGGGGCCCAGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKGTGTM*GPRLLQ
Trigger: CTGCAGCAGCCTGGGCCCCCACATTGTGCCTGTGCC...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAGGCACAGGCACAATGTaGGGGCCCAGGCTGCTGCAG +
Preference number: 4 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTGTGTM*GPRLLQ
Trigger: CTGCAGCAGCCTGGGCCCCCACATTGTGCCTGTGCC...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGACCAGGCCAGCCAGTGTaGTATAGCCTGGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRPGQPV*YSLALP
Trigger: TGGCAGGGCCAGGCTATACCACACTGGCTGGCCTGG...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGCCAGGCCAGCCAGTGTaGTATAGCCTGGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: GPKSGLASQSLCSEFWEVPGQPV*YSLALP
Trigger: TGGCAGGGCCAGGCTATACCACACTGGCTGGCCTGG...CACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GACTTTCGAGCATCTCTGGGACCAGCCTCAATGCCCACATGGTCACTGACAGCCGCTGCCAGGCCATTGTaGCTGAGGTCAAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: DFRASLGPASMPTWSLTAAARPL*LRSSDS
Trigger: GGAGTCACTTGACCTCAGCCACAATGGCCTGGCAGC...GGCTGTCAGTGACCATGTGGGCATTGAGGCTGGTCCCAGAGATGCTCGAAAGTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000167405.3
CDS-3UTR CCA 90 bp TCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGGCTGCCAGGCCATTGTaGCTGAGGTCAAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: SSLDAAGLPSQRKKLTGLAARPL*LRSSDS
Trigger: GGAGTCACTTGACCTCAGCCACAATGGCCTGGCAGC...CAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAGCCCGGCCCTGGCTGTaGGTGGTGAAGGCAGATATC +
Preference number: 4 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRARPWL*VVKADI
Trigger: GATATCTGCCTTCACCACCCACAGCCAGGGCCGGGC...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGCCCGGCCCTGGCTGTaGGTGGTGAAGGCAGATATC +
Preference number: 4 (lower is better)
Translates to: GTKVWFGITVPLLRVLGGARPWL*VVKADI
Trigger: GATATCTGCCTTCACCACCCACAGCCAGGGCCGGGC...ACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGCTGGCCCGGGCTGGATaGGGAAGCAGGCGATGGATA +
Preference number: 4 (lower is better)
Translates to: GPKSGLASQSLCSEFWEVLARAG*GSRRWI
Trigger: TATCCATCGCCTGCTTCCCCATCCAGCCCGGGCCAG...CACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGCTGGCCCGGGCTGGATaGGGAAGCAGGCGATGGATA +
Preference number: 4 (lower is better)
Translates to: GRDQSLVWHHSPFAQSSGLARAG*GSRRWI
Trigger: TATCCATCGCCTGCTTCCCCATCCAGCCCGGGCCAG...CCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGACTGGCCCGGGCTGGATaGGGAAGCAGGCGATGGATA +
Preference number: 4 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRLARAG*GSRRWI
Trigger: TATCCATCGCCTGCTTCCCCATCCAGCCCGGGCCAG...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp AGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGCCGTGGGGTGGTAGATaGAGGATGCCCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: STFAALGPILPSSPQGGWPWGGR*RMPCRL
Trigger: CAGCCTGCAGGGCATCCTCCATCTACCACCCCACGG...CCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGACCGTGGGGTGGTAGATaGAGGATGCCCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRPWGGR*RMPCRL
Trigger: CAGCCTGCAGGGCATCCTCCATCTACCACCCCACGG...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp AGCAGGGCTCAGGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGCTCCCGGAAGCCGTaGGGTGGTAGATGGAGGATG +
Preference number: 4 (lower is better)
Translates to: SRAQEGTKVWFGITVPLLSSRKP*GGRWRM
Trigger: CATCCTCCATCTACCACCCCACGGCTTCCGGGAGCT...GAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCCTGAGCCCTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAACAGGACCTGAAGGCCTaGGAGCTCCCGGAAGCCGTG +
Preference number: 4 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKQDLKA*ELPEAV
Trigger: CACGGCTTCCGGGAGCTCCCAGGCCTTCAGGTCCTG...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCGTGGCTGAGGTCAAGTaGCTCCAGGTAGCGCAGTCG +
Preference number: 4 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCVAEVK*LQVAQS
Trigger: CGACTGCGCTACCTGGAGTCACTTGACCTCAGCCAC...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGGTGGCTGAGGTCAAGTaGCTCCAGGTAGCGCAGTCG +
Preference number: 4 (lower is better)
Translates to: GPKSGLASQSLCSEFWEVVAEVK*LQVAQS
Trigger: CGACTGCGCTACCTGGAGTCACTTGACCTCAGCCAC...CACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCGGTTATGGCTCAGATTaGTGTCACTCAAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSGYGSD*CHSRGS
Trigger: GCTCCCCCTTGAGTGACATCAATCTGAGCCATAACC...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp ATGGGCCCAGAGCAAAAAGGTGTGACTAGACACTGGGCTCCAAGGGACCTTCAGGAGCTTGGGGTTGCCTaGCAAGTCCAGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: MGPEQKGVTRHWAPRDLQELGVA*QVQDLK
Trigger: CTTCAGGTCCTGGACTTGTCAGGCAACCCCAAGCTC...CTGAAGGTCCCTTGGAGCCCAGTGTCTAGTCACACCTTTTTGCTCTGGGCCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTCAGCTCCTGCCCACTTaGGCTTGGGGTTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: GTKVWFGITVPLLRVLGGQLLPT*AWGCLT
Trigger: TGTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTG...ACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGCAGCTCCTGCCCACTTaGGCTTGGGGTTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: GRDQSLVWHHSPFAQSSGQLLPT*AWGCLT
Trigger: TGTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTG...CCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAGAGTCGTCTGCACTCTaGCCACGGCCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKESSAL*PRPAAA
Trigger: TGCTGCTGCTGGCCGTGGGCAGAGTGCAGACGACTC...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp CTGAGTCAGCTTTGCAATGCGGGCGCTCACCTACATGTAGTCCAAACATCATGGGCTGGTGAAAATCTCTaGCGGCAGGGCTGCCAGGCC +
Preference number: 4 (lower is better)
Translates to: LSQLCNAGAHLHVVQTSWAGENL*RQGCQA
Trigger: GGCCTGGCAGCCCTGCCGGCAGAGATTTTCACCAGC...CCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp AGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGGTGGTAGATGGAGGATaGCCTGCAGGCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: STFAALGPILPSSPQGGWVVDGG*PAGWPV
Trigger: CACTGGCCAGCCTGCAGGGCATCCTCCATCTACCAC...CCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGTGGTAGATGGAGGATaGCCTGCAGGCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GTKVWFGITVPLLRVLGGVVDGG*PAGWPV
Trigger: CACTGGCCAGCCTGCAGGGCATCCTCCATCTACCAC...ACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCGACAGGTCTAGTTCCTaGAGCAAACCCAGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSDRSSS*SKPRPE
Trigger: TTCAGGCCTGGGTTTGCTGCAGGAACTAGACCTGTC...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACACCAGGCCAGCCAGTGTaGTATAGCCTGGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTPGQPV*YSLALP
Trigger: TGGCAGGGCCAGGCTATACCACACTGGCTGGCCTGG...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATCCAGGCCAGCCAGTGTaGTATAGCCTGGCCCTGCCA +
Preference number: 4 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDPGQPV*YSLALP
Trigger: TGGCAGGGCCAGGCTATACCACACTGGCTGGCCTGG...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAGCCCGGCCCTGGCTGTaGGTGGTGAAGGCAGATATC +
Preference number: 4 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTARPWL*VVKADI
Trigger: GATATCTGCCTTCACCACCCACAGCCAGGGCCGGGC...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp CTGAGTCAGCTTTGCAATGCGGGCGCTCACCTACATGTAGTCCAAACATCATGGGCCCGGCCCTGGCTGTaGGTGGTGAAGGCAGATATC +
Preference number: 4 (lower is better)
Translates to: LSQLCNAGAHLHVVQTSWARPWL*VVKADI
Trigger: GATATCTGCCTTCACCACCCACAGCCAGGGCCGGGC...CCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATCTGGCCCGGGCTGGATaGGGAAGCAGGCGATGGATA +
Preference number: 4 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDLARAG*GSRRWI
Trigger: TATCCATCGCCTGCTTCCCCATCCAGCCCGGGCCAG...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAACTGGCCCGGGCTGGATaGGGAAGCAGGCGATGGATA +
Preference number: 4 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKLARAG*GSRRWI
Trigger: TATCCATCGCCTGCTTCCCCATCCAGCCCGGGCCAG...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp CTGAGTCAGCTTTGCAATGCGGGCGCTCACCTACATGTAGTCCAAACATCATGGCCGTGGGGTGGTAGATaGAGGATGCCCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: LSQLCNAGAHLHVVQTSWPWGGR*RMPCRL
Trigger: CAGCCTGCAGGGCATCCTCCATCTACCACCCCACGG...CCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATCCGTGGGGTGGTAGATaGAGGATGCCCTGCAGGCTG +
Preference number: 4 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDPWGGR*RMPCRL
Trigger: CAGCCTGCAGGGCATCCTCCATCTACCACCCCACGG...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGAGCTCCCGGAAGCCGTaGGGTGGTAGATGGAGGATG +
Preference number: 4 (lower is better)
Translates to: GPKSGLASQSLCSEFWEVSSRKP*GGRWRM
Trigger: CATCCTCCATCTACCACCCCACGGCTTCCGGGAGCT...CACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CAA 72 bp CCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTaGCAATGCGGGCGCTCACCTACATGTAGTCCAAAC +
Preference number: 4 (lower is better)
Translates to: PRDLQPSGPESA*QCGRSPTCSPN
Trigger: GTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAAGGGAAGGCACTTAGGGACGTGGCTGAGGTCAAGTaGCTCCAGGTAGCGCAGTCG +
Preference number: 4 (lower is better)
Translates to: VQTSWVRSVQTKGKALRDVAEVK*LQVAQS
Trigger: CGACTGCGCTACCTGGAGTCACTTGACCTCAGCCAC...GTCCCTAAGTGCCTTCCCTTTTGTCTGGACTGACCTGACCCATGATGTTTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATGTGGCTGAGGTCAAGTaGCTCCAGGTAGCGCAGTCG +
Preference number: 4 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDVAEVK*LQVAQS
Trigger: CGACTGCGCTACCTGGAGTCACTTGACCTCAGCCAC...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCCCAGGCCATTGTGGCTaGGGTCAAGTGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCPGHCG*GQVTPG
Trigger: ACCTGGAGTCACTTGACCTCAGCCACAATGGCCTGG...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GACTTTCGAGCATCTCTGGGACCAGCCTCAATGCCCACATGGTCACTGACAGCCGGTTATGGCTCAGATTaGTGTCACTCAAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: DFRASLGPASMPTWSLTAGYGSD*CHSRGS
Trigger: GCTCCCCCTTGAGTGACATCAATCTGAGCCATAACC...GGCTGTCAGTGACCATGTGGGCATTGAGGCTGGTCCCAGAGATGCTCGAAAGTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000167405.3
CDS-3UTR TCA 90 bp GGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGCCTGGCTGTGGGTGGTaGAGGCAGATATCGAGACCT +
Preference number: 4 (lower is better)
Translates to: GRDQSLVWHHSPFAQSSGPGCGW*RQISRP
Trigger: AGGTCTCGATATCTGCCTTCACCACCCACAGCCAGG...CCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGCCTGGCTGTGGGTGGTaGAGGCAGATATCGAGACCT +
Preference number: 4 (lower is better)
Translates to: STFAALGPILPSSPQGGWPGCGW*RQISRP
Trigger: AGGTCTCGATATCTGCCTTCACCACCCACAGCCAGG...CCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCCCTGGCTGTGGGTGGTaGAGGCAGATATCGAGACCT +
Preference number: 4 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCPGCGW*RQISRP
Trigger: AGGTCTCGATATCTGCCTTCACCACCCACAGCCAGG...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGGACAGGTTCAGGCTCTaGATGGTAGGTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: STFAALGPILPSSPQGGWDRFRL*MVGAGR
Trigger: CCTGCCTGCACCTACCATTCAGAGCCTGAACCTGTC...CCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATCAGCTCCTGCCCACTTaGGCTTGGGGTTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDQLLPT*AWGCLT
Trigger: TGTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTG...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAACAGCTCCTGCCCACTTaGGCTTGGGGTTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKQLLPT*AWGCLT
Trigger: TGTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTG...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGCAGCAAACCCAGGCCTaGAAACACCTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: GRDQSLVWHHSPFAQSSGQQTQA*KHLSSC
Trigger: GCAGGAGCTGAGGTGTTTTCAGGCCTGGGTTTGCTG...CCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGCAGGGCTCAGGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCTGTAAAGCAGGGAGGTaGTGCAGCAGCATCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SRAQEGTKVWFGITVPLLCKAGR*CSSISG
Trigger: GCCTGAGATGCTGCTGCATCACCTCCCTGCTTTACA...GAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCCTGAGCCCTGCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAGTGGTAGATGGAGGATaGCCTGCAGGCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKVVDGG*PAGWPV
Trigger: CACTGGCCAGCCTGCAGGGCATCCTCCATCTACCAC...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATGTGGTAGATGGAGGATaGCCTGCAGGCTGGCCAGTG +
Preference number: 4 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDVVDGG*PAGWPV
Trigger: CACTGGCCAGCCTGCAGGGCATCCTCCATCTACCAC...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp TCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGCTGTATCCAAAGGGATaGGCACAGGCACAATGTGGG +
Preference number: 4 (lower is better)
Translates to: SSLDAAGLPSQRKKLTGLLYPKG*AQAQCG
Trigger: CCCACATTGTGCCTGTGCCCATCCCTTTGGATACAG...CAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGGCTGCCAGGCCATTGTaGCTGAGGTCAAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: GPKSGLASQSLCSEFWEVAARPL*LRSSDS
Trigger: GGAGTCACTTGACCTCAGCCACAATGGCCTGGCAGC...CACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAAGGGAAGGCACTTAGGGACAGCTCCCGGAAGCCGTaGGGTGGTAGATGGAGGATG +
Preference number: 4 (lower is better)
Translates to: VQTSWVRSVQTKGKALRDSSRKP*GGRWRM
Trigger: CATCCTCCATCTACCACCCCACGGCTTCCGGGAGCT...GTCCCTAAGTGCCTTCCCTTTTGTCTGGACTGACCTGACCCATGATGTTTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGCTCCCGGAAGCCGTaGGGTGGTAGATGGAGGATG +
Preference number: 4 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTSSRKP*GGRWRM
Trigger: CATCCTCCATCTACCACCCCACGGCTTCCGGGAGCT...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CAA 72 bp ACTGGAGCAGGGCTCAGGAAGGGACCAAAGTCTGGTTaGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAG +
Preference number: 4 (lower is better)
Translates to: TGAGLRKGPKSG*ASQSLCSEFWE
Trigger: CTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCCTGAGCCCTGCTCCAGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp CTGAGTCAGCTTTGCAATGCGGGCGCTCACCTACATGTAGTCCAAACATCATGGCCAGGCCATTGTGGCTaGGGTCAAGTGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LSQLCNAGAHLHVVQTSWPGHCG*GQVTPG
Trigger: ACCTGGAGTCACTTGACCTCAGCCACAATGGCCTGG...CCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATCCAGGCCATTGTGGCTaGGGTCAAGTGACTCCAGGT +
Preference number: 4 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDPGHCG*GQVTPG
Trigger: ACCTGGAGTCACTTGACCTCAGCCACAATGGCCTGG...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp ATGGGCCCAGAGCAAAAAGGTGTGACTAGACACTGGGCTCCAAGGGACCTTCAGGGTTATGGCTCAGATTaGTGTCACTCAAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: MGPEQKGVTRHWAPRDLQGYGSD*CHSRGS
Trigger: GCTCCCCCTTGAGTGACATCAATCTGAGCCATAACC...CTGAAGGTCCCTTGGAGCCCAGTGTCTAGTCACACCTTTTTGCTCTGGGCCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGCAGGGCTCAGGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCGGTTATGGCTCAGATTaGTGTCACTCAAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: SRAQEGTKVWFGITVPLLGYGSD*CHSRGS
Trigger: GCTCCCCCTTGAGTGACATCAATCTGAGCCATAACC...GAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCCTGAGCCCTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATCCTGGCTGTGGGTGGTaGAGGCAGATATCGAGACCT +
Preference number: 4 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDPGCGW*RQISRP
Trigger: AGGTCTCGATATCTGCCTTCACCACCCACAGCCAGG...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAGACAGGTTCAGGCTCTaGATGGTAGGTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKDRFRL*MVGAGR
Trigger: CCTGCCTGCACCTACCATTCAGAGCCTGAACCTGTC...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAGACAGGTTCAGGCTCTaGATGGTAGGTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTDRFRL*MVGAGR
Trigger: CCTGCCTGCACCTACCATTCAGAGCCTGAACCTGTC...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAGAGCTTGGGGTTGCCTaGCAAGTCCAGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTELGVA*QVQDLK
Trigger: CTTCAGGTCCTGGACTTGTCAGGCAACCCCAAGCTC...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAGAGCTTGGGGTTGCCTaGCAAGTCCAGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKELGVA*QVQDLK
Trigger: CTTCAGGTCCTGGACTTGTCAGGCAACCCCAAGCTC...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAAGGGAAGGCACTTAGGGACCAGCAAACCCAGGCCTaGAAACACCTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: VQTSWVRSVQTKGKALRDQQTQA*KHLSSC
Trigger: GCAGGAGCTGAGGTGTTTTCAGGCCTGGGTTTGCTG...GTCCCTAAGTGCCTTCCCTTTTGTCTGGACTGACCTGACCCATGATGTTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACACAGCAAACCCAGGCCTaGAAACACCTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTQQTQA*KHLSSC
Trigger: GCAGGAGCTGAGGTGTTTTCAGGCCTGGGTTTGCTG...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGTGTAAAGCAGGGAGGTaGTGCAGCAGCATCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GRDQSLVWHHSPFAQSSGCKAGR*CSSISG
Trigger: GCCTGAGATGCTGCTGCATCACCTCCCTGCTTTACA...CCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGTGTAAAGCAGGGAGGTaGTGCAGCAGCATCTCAGGC +
Preference number: 4 (lower is better)
Translates to: GPKSGLASQSLCSEFWEVCKAGR*CSSISG
Trigger: GCCTGAGATGCTGCTGCATCACCTCCCTGCTTTACA...CACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGTAAAGCAGGGAGGTaGTGCAGCAGCATCTCAGGC +
Preference number: 4 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCCKAGR*CSSISG
Trigger: GCCTGAGATGCTGCTGCATCACCTCCCTGCTTTACA...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp AGCAGGGCTCAGGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCGACAGGTCTAGTTCCTaGAGCAAACCCAGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: SRAQEGTKVWFGITVPLLDRSSS*SKPRPE
Trigger: TTCAGGCCTGGGTTTGCTGCAGGAACTAGACCTGTC...GAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCCTGAGCCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGGTCTCTTCTTCACACTaGCAGCCAGGGAAACACGGC +
Preference number: 4 (lower is better)
Translates to: GRDQSLVWHHSPFAQSSGVSSSH*QPGKHG
Trigger: GCCGTGTTTCCCTGGCTGCCAGTGTGAAGAAGAGAC...CCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp AGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGGTCTCTTCTTCACACTaGCAGCCAGGGAAACACGGC +
Preference number: 4 (lower is better)
Translates to: STFAALGPILPSSPQGGWVSSSH*QPGKHG
Trigger: GCCGTGTTTCCCTGGCTGCCAGTGTGAAGAAGAGAC...CCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAGCTGCCAGGCCATTGTaGCTGAGGTCAAGTGACTCC +
Preference number: 4 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKAARPL*LRSSDS
Trigger: GGAGTCACTTGACCTCAGCCACAATGGCCTGGCAGC...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTTCTCGTAGTCGGTTATaGCTCAGATTGATGTCACTC +
Preference number: 4 (lower is better)
Translates to: RDLQPSGPESALQCGRSPSRSRL*LRLMSL
Trigger: GAGTGACATCAATCTGAGCCATAACCGACTACGAGA...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp AGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGCTGGCAGCAGATTCCTaGGTGTCTCCACAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: STFAALGPILPSSPQGGWLAADS*VSPQCR
Trigger: CCTACACTGTGGAGACACCCAGGAATCTGCTGCCAG...CCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGCTGGCAGCAGATTCCTaGGTGTCTCCACAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: GRDQSLVWHHSPFAQSSGLAADS*VSPQCR
Trigger: CCTACACTGTGGAGACACCCAGGAATCTGCTGCCAG...CCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGACTGGCAGCAGATTCCTaGGTGTCTCCACAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRLAADS*VSPQCR
Trigger: CCTACACTGTGGAGACACCCAGGAATCTGCTGCCAG...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAGGTTATGGCTCAGATTaGTGTCACTCAAGGGGGAGC +
Preference number: 4 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRGYGSD*CHSRGS
Trigger: GCTCCCCCTTGAGTGACATCAATCTGAGCCATAACC...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACATGTAAAGCAGGGAGGTaGTGCAGCAGCATCTCAGGC +
Preference number: 4 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTCKAGR*CSSISG
Trigger: GCCTGAGATGCTGCTGCATCACCTCCCTGCTTTACA...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp AGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGAAACACCTCAGCTCCTaGCCACTTGAGCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: STFAALGPILPSSPQGGWKHLSS*PLELGV
Trigger: AACCCCAAGCTCAAGTGGGCAGGAGCTGAGGTGTTT...CCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGACAGGTCTAGTTCCTaGAGCAAACCCAGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: GTKVWFGITVPLLRVLGGDRSSS*SKPRPE
Trigger: TTCAGGCCTGGGTTTGCTGCAGGAACTAGACCTGTC...ACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAGACAGGTCTAGTTCCTaGAGCAAACCCAGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRDRSSS*SKPRPE
Trigger: TTCAGGCCTGGGTTTGCTGCAGGAACTAGACCTGTC...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAGTCTCTTCTTCACACTaGCAGCCAGGGAAACACGGC +
Preference number: 4 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKVSSSH*QPGKHG
Trigger: GCCGTGTTTCCCTGGCTGCCAGTGTGAAGAAGAGAC...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATGTCTCTTCTTCACACTaGCAGCCAGGGAAACACGGC +
Preference number: 4 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDVSSSH*QPGKHG
Trigger: GCCGTGTTTCCCTGGCTGCCAGTGTGAAGAAGAGAC...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp CTGAGTCAGCTTTGCAATGCGGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCTCTTCTTCACACTaGCAGCCAGGGAAACACGGC +
Preference number: 4 (lower is better)
Translates to: LSQLCNAGAHLHVVQTSWVSSSH*QPGKHG
Trigger: GCCGTGTTTCCCTGGCTGCCAGTGTGAAGAAGAGAC...CCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGCTGTATCCAAAGGGATaGGCACAGGCACAATGTGGG +
Preference number: 4 (lower is better)
Translates to: GPKSGLASQSLCSEFWEVLYPKG*AQAQCG
Trigger: CCCACATTGTGCCTGTGCCCATCCCTTTGGATACAG...CACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTCTGTATCCAAAGGGATaGGCACAGGCACAATGTGGG +
Preference number: 4 (lower is better)
Translates to: GTKVWFGITVPLLRVLGGLYPKG*AQAQCG
Trigger: CCCACATTGTGCCTGTGCCCATCCCTTTGGATACAG...ACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCCTGTATCCAAAGGGATaGGCACAGGCACAATGTGGG +
Preference number: 4 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCLYPKG*AQAQCG
Trigger: CCCACATTGTGCCTGTGCCCATCCCTTTGGATACAG...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAAGGGAAGGCACTTAGGGACCTGGCAGCAGATTCCTaGGTGTCTCCACAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: VQTSWVRSVQTKGKALRDLAADS*VSPQCR
Trigger: CCTACACTGTGGAGACACCCAGGAATCTGCTGCCAG...GTCCCTAAGTGCCTTCCCTTTTGTCTGGACTGACCTGACCCATGATGTTTGGAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACACTGGCAGCAGATTCCTaGGTGTCTCCACAGTGTAGG +
Preference number: 4 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTLAADS*VSPQCR
Trigger: CCTACACTGTGGAGACACCCAGGAATCTGCTGCCAG...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATAAACACCTCAGCTCCTaGCCACTTGAGCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDKHLSS*PLELGV
Trigger: AACCCCAAGCTCAAGTGGGCAGGAGCTGAGGTGTTT...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAAAACACCTCAGCTCCTaGCCACTTGAGCTTGGGGTT +
Preference number: 4 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKKHLSS*PLELGV
Trigger: AACCCCAAGCTCAAGTGGGCAGGAGCTGAGGTGTTT...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
52% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp CTGAGTCAGCTTTGCAATGCGGGCGCTCACCTACATGTAGTCCAAACATCATGGCTGTATCCAAAGGGATaGGCACAGGCACAATGTGGG +
Preference number: 4 (lower is better)
Translates to: LSQLCNAGAHLHVVQTSWLYPKG*AQAQCG
Trigger: CCCACATTGTGCCTGTGCCCATCCCTTTGGATACAG...CCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACACTGTATCCAAAGGGATaGGCACAGGCACAATGTGGG +
Preference number: 4 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTLYPKG*AQAQCG
Trigger: CCCACATTGTGCCTGTGCCCATCCCTTTGGATACAG...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp TTGTTATTGGGTATAGGCCCCAGGTACAAAAACTATCCTTGGCCCATATCTTTATGGGATAGGTCCACGTaGAGTGCCCGGCCCTGGCTG +
Preference number: 4 (lower is better)
Translates to: LLLGIGPRYKNYPWPISLWDRST*SARPWL
Trigger: CAGCCAGGGCCGGGCACTGCACGTGGACCTATCCCA...TAAAGATATGGGCCAAGGATAGTTTTTGTACCTGGGGCCTATACCCAATAACAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp ATGGGCCCAGAGCAAAAAGGTGTGACTAGACACTGGGCTCCAAGGGACCTTCAGTCTCGTAGTCGGTTATaGCTCAGATTGATGTCACTC +
Preference number: 4 (lower is better)
Translates to: MGPEQKGVTRHWAPRDLQSRSRL*LRLMSL
Trigger: GAGTGACATCAATCTGAGCCATAACCGACTACGAGA...CTGAAGGTCCCTTGGAGCCCAGTGTCTAGTCACACCTTTTTGCTCTGGGCCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp TTGTTATTGGGTATAGGCCCCAGGTACAAAAACTATCCTTGGCCCATATCTTTAGAGTCGTCTGCACTCTaGCCACGGCCAGCAGCAGCA +
Preference number: 4 (lower is better)
Translates to: LLLGIGPRYKNYPWPISLESSAL*PRPAAA
Trigger: TGCTGCTGCTGGCCGTGGGCAGAGTGCAGACGACTC...TAAAGATATGGGCCAAGGATAGTTTTTGTACCTGGGGCCTATACCCAATAACAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGTCTCGTAGTCGGTTATaGCTCAGATTGATGTCACTC +
Preference number: 4 (lower is better)
Translates to: GRDQSLVWHHSPFAQSSGSRSRL*LRLMSL
Trigger: GAGTGACATCAATCTGAGCCATAACCGACTACGAGA...CCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGATCTCGTAGTCGGTTATaGCTCAGATTGATGTCACTC +
Preference number: 4 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRSRSRL*LRLMSL
Trigger: GAGTGACATCAATCTGAGCCATAACCGACTACGAGA...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTTCTCGTAGTCGGTTATaGCTCAGATTGATGTCACTC +
Preference number: 4 (lower is better)
Translates to: GTKVWFGITVPLLRVLGGSRSRL*LRLMSL
Trigger: GAGTGACATCAATCTGAGCCATAACCGACTACGAGA...ACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp TTGTTATTGGGTATAGGCCCCAGGTACAAAAACTATCCTTGGCCCATATCTTTACAGCTCCTGCCCACTTaGGCTTGGGGTTGCCTGACA +
Preference number: 4 (lower is better)
Translates to: LLLGIGPRYKNYPWPISLQLLPT*AWGCLT
Trigger: TGTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTG...TAAAGATATGGGCCAAGGATAGTTTTTGTACCTGGGGCCTATACCCAATAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAATCTCGTAGTCGGTTATaGCTCAGATTGATGTCACTC +
Preference number: 4 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKSRSRL*LRLMSL
Trigger: GAGTGACATCAATCTGAGCCATAACCGACTACGAGA...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CCA 90 bp TTGTTATTGGGTATAGGCCCCAGGTACAAAAACTATCCTTGGCCCATATCTTTAAGCTCCCGGAAGCCGTaGGGTGGTAGATGGAGGATG +
Preference number: 4 (lower is better)
Translates to: LLLGIGPRYKNYPWPISLSSRKP*GGRWRM
Trigger: CATCCTCCATCTACCACCCCACGGCTTCCGGGAGCT...TAAAGATATGGGCCAAGGATAGTTTTTGTACCTGGGGCCTATACCCAATAACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp TTGTTATTGGGTATAGGCCCCAGGTACAAAAACTATCCTTGGCCCATATCTTTACCTGGCTGTGGGTGGTaGAGGCAGATATCGAGACCT +
Preference number: 4 (lower is better)
Translates to: LLLGIGPRYKNYPWPISLPGCGW*RQISRP
Trigger: AGGTCTCGATATCTGCCTTCACCACCCACAGCCAGG...TAAAGATATGGGCCAAGGATAGTTTTTGTACCTGGGGCCTATACCCAATAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp TTGTTATTGGGTATAGGCCCCAGGTACAAAAACTATCCTTGGCCCATATCTTTAGACAGGTTCAGGCTCTaGATGGTAGGTGCAGGCAGG +
Preference number: 4 (lower is better)
Translates to: LLLGIGPRYKNYPWPISLDRFRL*MVGAGR
Trigger: CCTGCCTGCACCTACCATTCAGAGCCTGAACCTGTC...TAAAGATATGGGCCAAGGATAGTTTTTGTACCTGGGGCCTATACCCAATAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp TTGTTATTGGGTATAGGCCCCAGGTACAAAAACTATCCTTGGCCCATATCTTTAGAGCTTGGGGTTGCCTaGCAAGTCCAGGACCTGAAG +
Preference number: 4 (lower is better)
Translates to: LLLGIGPRYKNYPWPISLELGVA*QVQDLK
Trigger: CTTCAGGTCCTGGACTTGTCAGGCAACCCCAAGCTC...TAAAGATATGGGCCAAGGATAGTTTTTGTACCTGGGGCCTATACCCAATAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR TCA 90 bp TTGTTATTGGGTATAGGCCCCAGGTACAAAAACTATCCTTGGCCCATATCTTTACAGCAAACCCAGGCCTaGAAACACCTCAGCTCCTGC +
Preference number: 4 (lower is better)
Translates to: LLLGIGPRYKNYPWPISLQQTQA*KHLSSC
Trigger: GCAGGAGCTGAGGTGTTTTCAGGCCTGGGTTTGCTG...TAAAGATATGGGCCAAGGATAGTTTTTGTACCTGGGGCCTATACCCAATAACAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR GCA 90 bp TTGTTATTGGGTATAGGCCCCAGGTACAAAAACTATCCTTGGCCCATATCTTTAGACAGGTCTAGTTCCTaGAGCAAACCCAGGCCTGAA +
Preference number: 4 (lower is better)
Translates to: LLLGIGPRYKNYPWPISLDRSSS*SKPRPE
Trigger: TTCAGGCCTGGGTTTGCTGCAGGAACTAGACCTGTC...TAAAGATATGGGCCAAGGATAGTTTTTGTACCTGGGGCCTATACCCAATAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
3UTR CAA 72 bp TCCCATATTACCATCTTCCCCACAAGGAGGGTGGATTaGATTTTCTCTCTAAGTCCTTCTATTATTAAGATT +
Preference number: 4 (lower is better)
Translates to: SHITIFPTRRVD*IFSLSPSIIKI
Trigger: AATCTTAATAATAGAAGGACTTAGAGAGAAAATCAAATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS TCA 90 bp GCTCCTGCCCACTTGAGCTTGGGGTTGCCTGACAAGTCCAGGACCTaGAGGCCTGGGAGCTCCCGGAAGCCGTGGGGTGGTAGATGGAGG +
Preference number: 5 (lower is better)
Translates to: APAHLSLGLPDKSRT*RPGSSRKPWGGRWR
Trigger: CCTCCATCTACCACCCCACGGCTTCCGGGAGCTCCCAGGCCTTCAGGTCCTGGACTTGTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS CCA 90 bp CTAGCCGGTTGGAAGACAGGTCCAGGTGGGCTGTATCCAAAGGGATaGGCACAGGCACAATGTGGGGGCCCAGGCTGCTGCAGTCCACAC +
Preference number: 5 (lower is better)
Translates to: LAGWKTGPGGLYPKG*AQAQCGGPGCCSPH
Trigger: GTGTGGACTGCAGCAGCCTGGGCCCCCACATTGTGCCTGTGCCCATCCCTTTGGATACAGCCCACCTGGACCTGTCTTCCAACCGGCTAG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp GCTCCAAGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCAGGGCTGCCAGGCCATaGTGGCTGAGGTCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: APRDLQPSGPESALQCGRRAARP*WLRSSD
Trigger: GTCACTTGACCTCAGCCACAATGGCCTGGCAGCCCT...GCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCTTGGAGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS TCA 90 bp AATCTCTGCCGGCAGGGCTGCCAGGCCATTGTGGCTGAGGTCAAGTaGCTCCAGGTAGCGCAGTCGGGAGAAGGCAGAGGGCATGATGCT +
Preference number: 5 (lower is better)
Translates to: NLCRQGCQAIVAEVK*LQVAQSGEGRGHDA
Trigger: AGCATCATGCCCTCTGCCTTCTCCCGACTGCGCTACCTGGAGTCACTTGACCTCAGCCACAATGGCCTGGCAGCCCTGCCGGCAGAGATT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS CCA 90 bp AGGTCCAGGTGGGCTGTATCCAAAGGGATGGGCACAGGCACAATGTaGGGGCCCAGGCTGCTGCAGTCCACACGGATCAGGCTGAAACTG +
Preference number: 5 (lower is better)
Translates to: RSRWAVSKGMGTGTM*GPRLLQSTRIRLKL
Trigger: CAGTTTCAGCCTGATCCGTGTGGACTGCAGCAGCCTGGGCCCCCACATTGTGCCTGTGCCCATCCCTTTGGATACAGCCCACCTGGACCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS TCA 90 bp CCTGCAGCAAACCCAGGCCTGAAAACACCTCAGCTCCTGCCCACTTaGGCTTGGGGTTGCCTGACAAGTCCAGGACCTGAAGGCCTGGGA +
Preference number: 5 (lower is better)
Translates to: PAANPGLKTPQLLPT*AWGCLTSPGPEGLG
Trigger: TCCCAGGCCTTCAGGTCCTGGACTTGTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTGAGGTGTTTTCAGGCCTGGGTTTGCTGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTACGGTTTCTAGCCGGTaGGAAGACAGGTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RDLQPSGPESALQCGRSPTVSSR*EDRSRW
Trigger: CCACCTGGACCTGTCTTCCAACCGGCTAGAAACCGT...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCAGGGCTGCCAGGCCATaGTGGCTGAGGTCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSRAARP*WLRSSD
Trigger: GTCACTTGACCTCAGCCACAATGGCCTGGCAGCCCT...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCCTGCCCACTTGAGCTaGGGGTTGCCTGACAAGTCC +
Preference number: 5 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSPAHLS*GLPDKS
Trigger: GGACTTGTCAGGCAACCCCAAGCTCAAGTGGGCAGG...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS GCA 90 bp ATCTCAGGCAGGGGCACCAAGCTGGAGCCTGACAGGTCTAGTTCCTaGAGCAAACCCAGGCCTGAAAACACCTCAGCTCCTGCCCACTTG +
Preference number: 5 (lower is better)
Translates to: ISGRGTKLEPDRSSS*SKPRPENTSAPAHL
Trigger: CAAGTGGGCAGGAGCTGAGGTGTTTTCAGGCCTGGGTTTGCTGCAGGAACTAGACCTGTCAGGCTCCAGCTTGGTGCCCCTGCCTGAGAT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS CCA 90 bp CGATGGATAAGATTGTGGGATAGGTCCACGTGCAGTGCCCGGCCCTaGCTGTGGGTGGTGAAGGCAGATATCGAGACCTCTCGTAGTCGG +
Preference number: 5 (lower is better)
Translates to: RWIRLWDRSTCSARP*LWVVKADIETSRSR
Trigger: CCGACTACGAGAGGTCTCGATATCTGCCTTCACCACCCACAGCCAGGGCCGGGCACTGCACGTGGACCTATCCCACAATCTTATCCATCG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS CCA 90 bp ACTGACTCATTCACGGTTTCTAGCCGGTTGGAAGACAGGTCCAGGTaGGCTGTATCCAAAGGGATGGGCACAGGCACAATGTGGGGGCCC +
Preference number: 5 (lower is better)
Translates to: TDSFTVSSRLEDRSR*AVSKGMGTGTMWGP
Trigger: GGGCCCCCACATTGTGCCTGTGCCCATCCCTTTGGATACAGCCCACCTGGACCTGTCTTCCAACCGGCTAGAAACCGTGAATGAGTCAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS CCA 90 bp AGCCTGGCCCTGCCAAGACTGACTCATTCACGGTTTCTAGCCGGTTaGAAGACAGGTCCAGGTGGGCTGTATCCAAAGGGATGGGCACAG +
Preference number: 5 (lower is better)
Translates to: SLALPRLTHSRFLAG*KTGPGGLYPKGWAQ
Trigger: CTGTGCCCATCCCTTTGGATACAGCCCACCTGGACCTGTCTTCCAACCGGCTAGAAACCGTGAATGAGTCAGTCTTGGCAGGGCCAGGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp AGGGACCTTCAGCCCAGTGGACCTGAGTCAGCTTTGCAATGCGGGCGCTCACCTCGGTTATGGCTCAGATaGATGTCACTCAAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: RDLQPSGPESALQCGRSPRLWLR*MSLKGE
Trigger: CTCCCCCTTGAGTGACATCAATCTGAGCCATAACCG...AGGTGAGCGCCCGCATTGCAAAGCTGACTCAGGTCCACTGGGCTGAAGGTCCCT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp AGCAGGGCTCAGGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCCCTGCCCACTTGAGCTaGGGGTTGCCTGACAAGTCC +
Preference number: 5 (lower is better)
Translates to: SRAQEGTKVWFGITVPLLPAHLS*GLPDKS
Trigger: GGACTTGTCAGGCAACCCCAAGCTCAAGTGGGCAGG...GAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCCTGAGCCCTGCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp ATGGGCCCAGAGCAAAAAGGTGTGACTAGACACTGGGCTCCAAGGGACCTTCAGTCAGCTCCTGCCCACTaGAGCTTGGGGTTGCCTGAC +
Preference number: 5 (lower is better)
Translates to: MGPEQKGVTRHWAPRDLQSAPAH*SLGLPD
Trigger: GTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTGA...CTGAAGGTCCCTTGGAGCCCAGTGTCTAGTCACACCTTTTTGCTCTGGGCCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCAGGGCTGCCAGGCCATaGTGGCTGAGGTCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCRAARP*WLRSSD
Trigger: GTCACTTGACCTCAGCCACAATGGCCTGGCAGCCCT...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp AGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGAGGGCTGCCAGGCCATaGTGGCTGAGGTCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: STFAALGPILPSSPQGGWRAARP*WLRSSD
Trigger: GTCACTTGACCTCAGCCACAATGGCCTGGCAGCCCT...CCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp GTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCGGTTATGGCTCAGATaGATGTCACTCAAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: VPGGNVYVSSLDAAGLPSRLWLR*MSLKGE
Trigger: CTCCCCCTTGAGTGACATCAATCTGAGCCATAACCG...GGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTCCCCCAGGGAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCCCTGCCCACTTGAGCTaGGGGTTGCCTGACAAGTCC +
Preference number: 5 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCPAHLS*GLPDKS
Trigger: GGACTTGTCAGGCAACCCCAAGCTCAAGTGGGCAGG...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp GGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTCCTGCCCACTTGAGCTaGGGGTTGCCTGACAAGTCC +
Preference number: 5 (lower is better)
Translates to: GTKVWFGITVPLLRVLGGPAHLS*GLPDKS
Trigger: GGACTTGTCAGGCAACCCCAAGCTCAAGTGGGCAGG...ACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCTCAGCTCCTGCCCACTaGAGCTTGGGGTTGCCTGAC +
Preference number: 5 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCSAPAH*SLGLPD
Trigger: GTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTGA...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp GAAATGTGTACGTTTCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGATCAGCTCCTGCCCACTaGAGCTTGGGGTTGCCTGAC +
Preference number: 5 (lower is better)
Translates to: EMCTFPVSMLRDSHPRGRSAPAH*SLGLPD
Trigger: GTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTGA...TCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGAAACGTACACATTTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGTCAGCTCCTGCCCACTaGAGCTTGGGGTTGCCTGAC +
Preference number: 5 (lower is better)
Translates to: GPKSGLASQSLCSEFWEVSAPAH*SLGLPD
Trigger: GTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTGA...CACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp AGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGTCAGCTCCTGCCCACTaGAGCTTGGGGTTGCCTGAC +
Preference number: 5 (lower is better)
Translates to: STFAALGPILPSSPQGGWSAPAH*SLGLPD
Trigger: GTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTGA...CCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGACGGTTTCTAGCCGGTaGGAAGACAGGTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: GPKSGLASQSLCSEFWEVTVSSR*EDRSRW
Trigger: CCACCTGGACCTGTCTTCCAACCGGCTAGAAACCGT...CACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp AGCATCGTAAGACAGGGTCCCTGGGGGAAATGTGTACGTTTCCAGTCTCGATGCACGGTTTCTAGCCGGTaGGAAGACAGGTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: SIVRQGPWGKCVRFQSRCTVSSR*EDRSRW
Trigger: CCACCTGGACCTGTCTTCCAACCGGCTAGAAACCGT...GCATCGAGACTGGAAACGTACACATTTCCCCCAGGGACCCTGTCTTACGATGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp GTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAAGGGAAGGCACTTAGGGACAGGGCTGCCAGGCCATaGTGGCTGAGGTCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: VQTSWVRSVQTKGKALRDRAARP*WLRSSD
Trigger: GTCACTTGACCTCAGCCACAATGGCCTGGCAGCCCT...GTCCCTAAGTGCCTTCCCTTTTGTCTGGACTGACCTGACCCATGATGTTTGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGGCTGCCAGGCCATaGTGGCTGAGGTCAAGTGAC +
Preference number: 5 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTRAARP*WLRSSD
Trigger: GTCACTTGACCTCAGCCACAATGGCCTGGCAGCCCT...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp TCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGCGGTTATGGCTCAGATaGATGTCACTCAAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: SSLDAAGLPSQRKKLTGLRLWLR*MSLKGE
Trigger: CTCCCCCTTGAGTGACATCAATCTGAGCCATAACCG...CAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp TCCAGTCTCGATGCTGCGGGACTCCCATCCCAGAGGAAGAAACTGACAGGCTTGAGGCGATGGATAAGATaGTGGGATAGGTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: SSLDAAGLPSQRKKLTGLRRWIR*WDRSTC
Trigger: GCACGTGGACCTATCCCACAATCTTATCCATCGCCT...CAAGCCTGTCAGTTTCTTCCTCTGGGATGGGAGTCCCGCAGCATCGAGACTGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAACCTGCCCACTTGAGCTaGGGGTTGCCTGACAAGTCC +
Preference number: 5 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKPAHLS*GLPDKS
Trigger: GGACTTGTCAGGCAACCCCAAGCTCAAGTGGGCAGG...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACACCTGCCCACTTGAGCTaGGGGTTGCCTGACAAGTCC +
Preference number: 5 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTPAHLS*GLPDKS
Trigger: GGACTTGTCAGGCAACCCCAAGCTCAAGTGGGCAGG...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp GGGCGCTCACCTACATGTAGTCCAAACATCATGGGTCAGGTCAGTCCAGACAAATCAGCTCCTGCCCACTaGAGCTTGGGGTTGCCTGAC +
Preference number: 5 (lower is better)
Translates to: GRSPTCSPNIMGQVSPDKSAPAH*SLGLPD
Trigger: GTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTGA...TTTGTCTGGACTGACCTGACCCATGATGTTTGGACTACATGTAGGTGAGCGCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp CTGAGTCAGCTTTGCAATGCGGGCGCTCACCTACATGTAGTCCAAACATCATGGACGGTTTCTAGCCGGTaGGAAGACAGGTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: LSQLCNAGAHLHVVQTSWTVSSR*EDRSRW
Trigger: CCACCTGGACCTGTCTTCCAACCGGCTAGAAACCGT...CCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp GTCCAAACATCATGGGTCAGGTCAGTCCAGACAAAAGGGAAGGCACTTAGGGACACGGTTTCTAGCCGGTaGGAAGACAGGTCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: VQTSWVRSVQTKGKALRDTVSSR*EDRSRW
Trigger: CCACCTGGACCTGTCTTCCAACCGGCTAGAAACCGT...GTCCCTAAGTGCCTTCCCTTTTGTCTGGACTGACCTGACCCATGATGTTTGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp AGCAGGGCTCAGGAAGGGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGGCGATGGATAAGATaGTGGGATAGGTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: SRAQEGTKVWFGITVPLLRRWIR*WDRSTC
Trigger: GCACGTGGACCTATCCCACAATCTTATCCATCGCCT...GAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCCCTTCCTGAGCCCTGCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp GGACCAAAGTCTGGTTTGGCATCACAGTCCCTTTGCTCAGAGTTCTGGGAGGTGAGGCGATGGATAAGATaGTGGGATAGGTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: GPKSGLASQSLCSEFWEVRRWIR*WDRSTC
Trigger: GCACGTGGACCTATCCCACAATCTTATCCATCGCCT...CACCTCCCAGAACTCTGAGCAAAGGGACTGTGATGCCAAACCAGACTTTGGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp CTGAGTCAGCTTTGCAATGCGGGCGCTCACCTACATGTAGTCCAAACATCATGGCGGTTATGGCTCAGATaGATGTCACTCAAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: LSQLCNAGAHLHVVQTSWRLWLR*MSLKGE
Trigger: CTCCCCCTTGAGTGACATCAATCTGAGCCATAACCG...CCATGATGTTTGGACTACATGTAGGTGAGCGCCCGCATTGCAAAGCTGACTCAG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACACGGTTATGGCTCAGATaGATGTCACTCAAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTRLWLR*MSLKGE
Trigger: CTCCCCCTTGAGTGACATCAATCTGAGCCATAACCG...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp CACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGAGGGTGGATAGGCGATGGATAAGATaGTGGGATAGGTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: HVCCSWSHITIFPTRRVDRRWIR*WDRSTC
Trigger: GCACGTGGACCTATCCCACAATCTTATCCATCGCCT...ATCCACCCTCCTTGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp ACACCAGGTGAGCACGTTTGCTGCTCTTGGTCCCATATTACCATCTTCCCCACAAGGCGATGGATAAGATaGTGGGATAGGTCCACGTGC +
Preference number: 5 (lower is better)
Translates to: TPGEHVCCSWSHITIFPTRRWIR*WDRSTC
Trigger: GCACGTGGACCTATCCCACAATCTTATCCATCGCCT...TGTGGGGAAGATGGTAATATGGGACCAAGAGCAGCAAACGTGCTCACCTGGTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS CCA 90 bp CTGTGGGTGGTGAAGGCAGATATCGAGACCTCTCGTAGTCGGTTATaGCTCAGATTGATGTCACTCAAGGGGGAGCTGGTGAAAATCTCT +
Preference number: 5 (lower is better)
Translates to: LWVVKADIETSRSRL*LRLMSLKGELVKIS
Trigger: AGAGATTTTCACCAGCTCCCCCTTGAGTGACATCAATCTGAGCCATAACCGACTACGAGAGGTCTCGATATCTGCCTTCACCACCCACAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS-3UTR CAA 90 bp TTGTTATTGGGTATAGGCCCCAGGTACAAAAACTATCCTTGGCCCATATCTTTACGGTTATGGCTCAGATaGATGTCACTCAAGGGGGAG +
Preference number: 5 (lower is better)
Translates to: LLLGIGPRYKNYPWPISLRLWLR*MSLKGE
Trigger: CTCCCCCTTGAGTGACATCAATCTGAGCCATAACCG...TAAAGATATGGGCCAAGGATAGTTTTTGTACCTGGGGCCTATACCCAATAACAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS TCA 72 bp CGGCAGGGCTGCCAGGCCATTGTGGCTGAGGTCAAGTaGCTCCAGGTAGCGCAGTCGGGAGAAGGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: RQGCQAIVAEVK*LQVAQSGEGRG
Trigger: CCCTCTGCCTTCTCCCGACTGCGCTACCTGGAGTCACTTGACCTCAGCCACAATGGCCTGGCAGCCCTGCCG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS CAA 72 bp GCCCGGGCTGGATGGGGAAGCAGGCGATGGATAAGATaGTGGGATAGGTCCACGTGCAGTGCCCGGCCCTGG +
Preference number: 6 (lower is better)
Translates to: ARAGWGSRRWIR*WDRSTCSARPW
Trigger: CCAGGGCCGGGCACTGCACGTGGACCTATCCCACAATCTTATCCATCGCCTGCTTCCCCATCCAGCCCGGGC
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS TCA 72 bp CACTTGAGCTTGGGGTTGCCTGACAAGTCCAGGACCTaGAGGCCTGGGAGCTCCCGGAAGCCGTGGGGTGGT +
Preference number: 6 (lower is better)
Translates to: HLSLGLPDKSRT*RPGSSRKPWGG
Trigger: ACCACCCCACGGCTTCCGGGAGCTCCCAGGCCTTCAGGTCCTGGACTTGTCAGGCAACCCCAAGCTCAAGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS TCA 72 bp CACCTCAGCTCCTGCCCACTTGAGCTTGGGGTTGCCTaGCAAGTCCAGGACCTGAAGGCCTGGGAGCTCCCG +
Preference number: 6 (lower is better)
Translates to: HLSSCPLELGVA*QVQDLKAWELP
Trigger: CGGGAGCTCCCAGGCCTTCAGGTCCTGGACTTGTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTGAGGTG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS CCA 72 bp TGGGCTGTATCCAAAGGGATGGGCACAGGCACAATGTaGGGGCCCAGGCTGCTGCAGTCCACACGGATCAGG +
Preference number: 6 (lower is better)
Translates to: WAVSKGMGTGTM*GPRLLQSTRIR
Trigger: CCTGATCCGTGTGGACTGCAGCAGCCTGGGCCCCCACATTGTGCCTGTGCCCATCCCTTTGGATACAGCCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS CAA 72 bp TGGGTGAGGCCTGCCAGCCCCATGAAGGCATCTGGGTaGATGGTAGCCAGAGGGTTCCCATCCAGGCTCAGG +
Preference number: 6 (lower is better)
Translates to: WVRPASPMKASG*MVARGFPSRLR
Trigger: CCTGAGCCTGGATGGGAACCCTCTGGCTACCATCAACCCAGATGCCTTCATGGGGCTGGCAGGCCTCACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS TCA 72 bp AAATCTCTGCCGGCAGGGCTGCCAGGCCATTGTGGCTaGGGTCAAGTGACTCCAGGTAGCGCAGTCGGGAGA +
Preference number: 6 (lower is better)
Translates to: KSLPAGLPGHCG*GQVTPGSAVGR
Trigger: TCTCCCGACTGCGCTACCTGGAGTCACTTGACCTCAGCCACAATGGCCTGGCAGCCCTGCCGGCAGAGATTT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS TCA 72 bp GGGGGCCCAGGCTGCTGCAGTCCACACGGATCAGGCTaGAACTGTCAAAGAGGCCGAATGTCTCTTCTTCAC +
Preference number: 6 (lower is better)
Translates to: GGPGCCSPHGSG*NCQRGRMSLLH
Trigger: GTGAAGAAGAGACATTCGGCCTCTTTGACAGTTTCAGCCTGATCCGTGTGGACTGCAGCAGCCTGGGCCCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS TCA 72 bp AACCCAGGCCTGAAAACACCTCAGCTCCTGCCCACTTaGGCTTGGGGTTGCCTGACAAGTCCAGGACCTGAA +
Preference number: 6 (lower is better)
Translates to: NPGLKTPQLLPT*AWGCLTSPGPE
Trigger: TTCAGGTCCTGGACTTGTCAGGCAACCCCAAGCTCAAGTGGGCAGGAGCTGAGGTGTTTTCAGGCCTGGGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS CCA 72 bp TTCACGGTTTCTAGCCGGTTGGAAGACAGGTCCAGGTaGGCTGTATCCAAAGGGATGGGCACAGGCACAATG +
Preference number: 6 (lower is better)
Translates to: FTVSSRLEDRSR*AVSKGMGTGTM
Trigger: CATTGTGCCTGTGCCCATCCCTTTGGATACAGCCCACCTGGACCTGTCTTCCAACCGGCTAGAAACCGTGAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS CCA 72 bp CTGCCAAGACTGACTCATTCACGGTTTCTAGCCGGTTaGAAGACAGGTCCAGGTGGGCTGTATCCAAAGGGA +
Preference number: 6 (lower is better)
Translates to: LPRLTHSRFLAG*KTGPGGLYPKG
Trigger: TCCCTTTGGATACAGCCCACCTGGACCTGTCTTCCAACCGGCTAGAAACCGTGAATGAGTCAGTCTTGGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS CAA 90 bp GTGAAGGCAGATATCGAGACCTCTCGTAGTCGGTTATGGCTCAGATaGATGTCACTCAAGGGGGAGCTGGTGAAAATCTCTGCCGGCAGG +
Preference number: 6 (lower is better)
Translates to: VKADIETSRSRLWLR*MSLKGELVKISAGR
Trigger: CCTGCCGGCAGAGATTTTCACCAGCTCCCCCTTGAGTGACATCAATCTGAGCCATAACCGACTACGAGAGGTCTCGATATCTGCCTTCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2
CDS CAA 72 bp GATATCGAGACCTCTCGTAGTCGGTTATGGCTCAGATaGATGTCACTCAAGGGGGAGCTGGTGAAAATCTCT +
Preference number: 6 (lower is better)
Translates to: DIETSRSRLWLR*MSLKGELVKIS
Trigger: AGAGATTTTCACCAGCTCCCCCTTGAGTGACATCAATCTGAGCCATAACCGACTACGAGAGGTCTCGATATC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 7 transcripts:
ENSMUST00000094161.11
ENSMUST00000164726.8
ENSMUST00000165257.8
ENSMUST00000165901.8
ENSMUST00000167405.3
ENSMUST00000179780.3
ENSMUST00000206414.2