Pregenerated sensors for TSKS (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059891Ensembl transcript IDs: ENSMUST00000080233.9, ENSMUST00000120929.9, ENSMUST00000207719.2, ENSMUST00000208475.2
Found 168 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR-3UTR CCA 90 bp | GCCAGCATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGGCATATAGTCCAAAGTaGCCACCTTCTCCCCTCCTC | + |
Preference number: 2 (lower is better) Translates to: ASMRGHLLFRAWTPTFRGAYSPK*PPSPLL Trigger: GAGGAGGGGAGAAGGTGGCCACTTTGGACTATATGC...CCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCATGCTGGC 54% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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3UTR TCA 72 bp | CCATTGCCCCCGTGGACCCCTCAAGTGGCAGGTGGCTaGGTTGGTCGTGGAGGGAGCACATCTTCAAATGCA | + |
Preference number: 3 (lower is better) Translates to: PLPPWTPQVAGG*VGRGGSTSSNA Trigger: TGCATTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCCACGGGGGCAATGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR TCA 90 bp | CATTGCCCCCGTGGACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGGACCCGAGCAGCCCTaGATGGGAGTGGCAGGGCTC | + |
Preference number: 4 (lower is better) Translates to: HCPRGPLKWQVAELVVEGGPEQP*MGVAGL Trigger: GAGCCCTGCCACTCCCATTCAGGGCTGCTCGGGTCC...TCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCCACGGGGGCAATG 67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CCA 90 bp | CATTGCCCCCGTGGACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGGGTCCCCCGCTTCGTaGATCTCTTTGGATTGCCAG | + |
Preference number: 4 (lower is better) Translates to: HCPRGPLKWQVAELVVEGGSPAS*ISLDCQ Trigger: CTGGCAATCCAAAGAGATCCACGAAGCGGGGGACCC...TCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCCACGGGGGCAATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CCA 90 bp | GGACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAACAGTGCATCGGCTCGTaGGACATCCGGGGCTCCACC | + |
Preference number: 4 (lower is better) Translates to: GPLKWQVAELVVEGAHLQQCIGS*DIRGST Trigger: GGTGGAGCCCCGGATGTCCCACGAGCCGATGCACTG...TTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CCA 90 bp | CATTGCCCCCGTGGACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAAGCCCTGAATGGGAGTaGCAGGGCTCAGACCATGTC | + |
Preference number: 4 (lower is better) Translates to: HCPRGPLKWQVAELVVEGSPEWE*QGSDHV Trigger: GACATGGTCTGAGCCCTGCCACTCCCATTCAGGGCT...TCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCCACGGGGGCAATG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | CATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTGGGGTTCCTCGGGGCTaGCAGGAGGACCCGAGCAGC | + |
Preference number: 4 (lower is better) Translates to: HLLFRAWTPTFRGSPSIAGVPRG*QEDPSS Trigger: GCTGCTCGGGTCCTCCTGGCAGCCCCGAGGAACCCC...AGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | GGACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAACTGTGCGGACTGCCATaGCCCAGCCACTGGAGGACA | + |
Preference number: 4 (lower is better) Translates to: GPLKWQVAELVVEGAHLQLCGLP*PSHWRT Trigger: TGTCCTCCAGTGGCTGGGGCATGGCAGTCCGCACAG...TTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | GGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTAGGGTCCCTCCCCTGTaGGGACTGCCATGCCCCAGC | + |
Preference number: 4 (lower is better) Translates to: GHLLFRAWTPTFRGSPSIRVPPL*GLPCPS Trigger: GCTGGGGCATGGCAGTCCGCACAGGGGAGGGACCCT...AATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CCA 90 bp | GGACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAGCTGCAGGGACTCCGTaGATAACTGCTGCCCCTGGC | + |
Preference number: 4 (lower is better) Translates to: GPLKWQVAELVVEGAHLQAAGTP*ITAAPG Trigger: GCCAGGGGCAGCAGTTATCCACGGAGTCCCTGCAGC...TTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CCA 90 bp | ATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCGGGCCAACCGAAGGGTaGAGCTCAGGGCCTCTGCCC | + |
Preference number: 4 (lower is better) Translates to: MRGHLLFRAWTPTFRGSPGPTEG*SSGPLP Trigger: GGGCAGAGGCCCTGAGCTCCACCCTTCGGTTGGCCC...GGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR GCA 90 bp | GAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCAAGGTGGCCCTGGCAGTaGCAGTGGACCACTGTCCTC | + |
Preference number: 4 (lower is better) Translates to: EAIYCSEPGLPRLGGAPPRWPWQ*QWTTVL Trigger: GAGGACAGTGGTCCACTGGCACTGCCAGGGCCACCT...TGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | AGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCCTCCTGCAAGCCCCTTaGGGACTGTGCCTGTTCCCG | + |
Preference number: 4 (lower is better) Translates to: RGHLLFRAWTPTFRGSPSLLQAP*GLCLFP Trigger: CGGGAACAGGCACAGTCCGCAAGGGGCTTGCAGGAG...GGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | GGACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAGCACGTTCCAGCAGCTaGTGCAGGGACTCCGTGGAT | + |
Preference number: 4 (lower is better) Translates to: GPLKWQVAELVVEGAHLQARSSS*CRDSVD Trigger: ATCCACGGAGTCCCTGCAGCAGCTGCTGGAACGTGC...TTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | GGACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAGGAGCTCAGGGCCTCTaGCCTGACGTGTTTGGCCAA | + |
Preference number: 4 (lower is better) Translates to: GPLKWQVAELVVEGAHLQGAQGL*PDVFGQ Trigger: TTGGCCAAACACGTCAGGGCAGAGGCCCTGAGCTCC...TTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CCA 90 bp | GACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAAGGAAGCAGGTGGCCCTaGCAGTGCCAGTGGACCACT | + |
Preference number: 4 (lower is better) Translates to: DPSSGRWLSWSWREHIFKGSRWP*QCQWTT Trigger: AGTGGTCCACTGGCACTGCCAGGGCCACCTGCTTCC...TTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CCA 90 bp | GAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCACGAACGGCCTCGTCTTaGGCCAACCGAAGGGTGGAG | + |
Preference number: 4 (lower is better) Translates to: EAIYCSEPGLPRLGGAPPRTASS*ANRRVE Trigger: CTCCACCCTTCGGTTGGCCCAAGACGAGGCCGTTCG...TGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | GAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCAGAGTGTAGGCGCCGCTaGGCTTACTGGACTGGGCAG | + |
Preference number: 4 (lower is better) Translates to: EAIYCSEPGLPRLGGAPPECRRR*AYWTGQ Trigger: CTGCCCAGTCCAGTAAGCCCAGCGGCGCCTACACTC...TGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | ATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTGGCGCTCCAGCTCCTaGGGAGAGGAGTGTAGGCGC | + |
Preference number: 4 (lower is better) Translates to: MRGHLLFRAWTPTFRGSPWRSSS*GEECRR Trigger: GCGCCTACACTCCTCTCCCCAGGAGCTGGAGCGCCA...GGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCAT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208475.2 |
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CDS-3UTR TCA 90 bp | GCCAGCATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGTCAGGGCCTCTGCCCTaGCGTGTTTGGCCAAGGCCT | + |
Preference number: 4 (lower is better) Translates to: ASMRGHLLFRAWTPTFRGSGPLP*RVWPRP Trigger: AGGCCTTGGCCAAACACGTCAGGGCAGAGGCCCTGA...CCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCATGCTGGC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR TCA 90 bp | GGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTTCAGGGCCTCTGCCCTaGCGTGTTTGGCCAAGGCCT | + |
Preference number: 4 (lower is better) Translates to: GHLLFRAWTPTFRGSPSISGPLP*RVWPRP Trigger: AGGCCTTGGCCAAACACGTCAGGGCAGAGGCCCTGA...AATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR TCA 90 bp | GGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTCAAGTGGCAGGTGGCTaGGTTGGTCGTGGAGGGAGC | + |
Preference number: 4 (lower is better) Translates to: GHLLFRAWTPTFRGSPSIQVAGG*VGRGGS Trigger: GCTCCCTCCACGACCAACTCAGCCACCTGCCACTTG...AATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208475.2 |
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CDS-3UTR GCA 90 bp | GGACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAACGGGGCGTCTCATCCTaGAGTTGCTGCTGGAGGTAT | + |
Preference number: 4 (lower is better) Translates to: GPLKWQVAELVVEGAHLQRGVSS*SCCWRY Trigger: ATACCTCCAGCAGCAACTGCAGGATGAGACGCCCCG...TTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | ATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCGTGGATAACTGCTaGCCCTGGCTGGCACAGCGC | + |
Preference number: 4 (lower is better) Translates to: MRGHLLFRAWTPTFRGSPSVDNC*PWLAQR Trigger: GCGCTGTGCCAGCCAGGGGCAGCAGTTATCCACGGA...GGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR GCA 90 bp | GGACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAACGTTCCAGCAGCTGCTaGAGGGACTCCGTGGATAAC | + |
Preference number: 4 (lower is better) Translates to: GPLKWQVAELVVEGAHLQRSSSC*RDSVDN Trigger: GTTATCCACGGAGTCCCTGCAGCAGCTGCTGGAACG...TTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | AGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCGCACGTTCCAGCAGCTaGTGCAGGGACTCCGTGGAT | + |
Preference number: 4 (lower is better) Translates to: RGHLLFRAWTPTFRGSPSARSSS*CRDSVD Trigger: ATCCACGGAGTCCCTGCAGCAGCTGCTGGAACGTGC...GGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | CATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTTGCGCCCGCTCCCACTaGCCCAGGAAGCCATCCAGA | + |
Preference number: 4 (lower is better) Translates to: HLLFRAWTPTFRGSPSIACARSH*PRKPSR Trigger: TCTGGATGGCTTCCTGGGCCAGTGGGAGCGGGCGCA...AGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CCA 90 bp | ATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCGTAGCCTCTGGCAACTaGGGCAGGCAGGAGCCAGAC | + |
Preference number: 4 (lower is better) Translates to: MRGHLLFRAWTPTFRGSPVASGN*GRQEPD Trigger: GTCTGGCTCCTGCCTGCCCCAGTTGCCAGAGGCTAC...GGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | ATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTTGGGCCAACCGAAGGGTaGAGCTCAGGGCCTCTGCCC | + |
Preference number: 4 (lower is better) Translates to: IYCSEPGLPRLGGAPPLLGPTEG*SSGPLP Trigger: GGGCAGAGGCCCTGAGCTCCACCCTTCGGTTGGCCC...AAGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAAT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | AGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCGGCAGGTGGCTGAGTTaGTCGTGGAGGGAGCACATC | + |
Preference number: 4 (lower is better) Translates to: RGHLLFRAWTPTFRGSPSGRWLS*SWREHI Trigger: GATGTGCTCCCTCCACGACCAACTCAGCCACCTGCC...GGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208475.2 |
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CDS-3UTR TCA 90 bp | GACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAATTCAGCGTCTTCCACTaGACGGGTCACCTTGCGGCA | + |
Preference number: 4 (lower is better) Translates to: DPSSGRWLSWSWREHIFKFSVFH*TGHLAA Trigger: TGCCGCAAGGTGACCCGTTCAGTGGAAGACGCTGAA...TTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | ATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTTCTGATGCCACCGGGCTaGCAGCGAGGACACCTCCCT | + |
Preference number: 4 (lower is better) Translates to: IYCSEPGLPRLGGAPPLLLMPPG*QRGHLP Trigger: AGGGAGGTGTCCTCGCTGGCAGCCCGGTGGCATCAG...AAGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CCA 90 bp | CATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTCCGAGCAGCCCTGAATaGGAGTGGCAGGGCTCAGAC | + |
Preference number: 4 (lower is better) Translates to: HLLFRAWTPTFRGSPSIAPSSPE*EWQGSD Trigger: GTCTGAGCCCTGCCACTCCCATTCAGGGCTGCTCGG...AGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CCA 90 bp | AGCATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCTGTTTGGCCAAGGCCTaGCGCTCCAGCTCCTGGGGA | + |
Preference number: 4 (lower is better) Translates to: SMRGHLLFRAWTPTFRGSCLAKA*RSSSWG Trigger: TCCCCAGGAGCTGGAGCGCCAGGCCTTGGCCAAACA...GCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCATGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208475.2 |
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CDS-3UTR GCA 90 bp | CATTGCCCCCGTGGACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAAGCAAGGCAGAGTTCTaGTTCAGGACATTGGTTTTG | + |
Preference number: 4 (lower is better) Translates to: HCPRGPLKWQVAELVVEGSKAEF*FRTLVL Trigger: CAAAACCAATGTCCTGAAGCAGAACTCTGCCTTGCT...TCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCCACGGGGGCAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | AGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCAGTGCACAACTCATCTaGTCGTCCTCGCAGCTCCTG | + |
Preference number: 4 (lower is better) Translates to: RGHLLFRAWTPTFRGSPSSAQLI*SSSQLL Trigger: CAGGAGCTGCGAGGACGAGCAGATGAGTTGTGCACT...GGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | ATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTTTCCGTGGATAACTGCTaGCCCTGGCTGGCACAGCGC | + |
Preference number: 4 (lower is better) Translates to: IYCSEPGLPRLGGAPPLLSVDNC*PWLAQR Trigger: GCGCTGTGCCAGCCAGGGGCAGCAGTTATCCACGGA...AAGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR GCA 90 bp | AGCATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCGACTCCGTGGATAACTaGTGCCCCTGGCTGGCACAG | + |
Preference number: 4 (lower is better) Translates to: SMRGHLLFRAWTPTFRGSDSVDN*CPWLAQ Trigger: CTGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTC...GCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCATGCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR GCA 90 bp | GCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCGTTCCAGCAGCTGCTaGAGGGACTCCGTGGATAAC | + |
Preference number: 4 (lower is better) Translates to: AIYCSEPGLPRLGGAPPLRSSSC*RDSVDN Trigger: GTTATCCACGGAGTCCCTGCAGCAGCTGCTGGAACG...CAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR GCA 90 bp | CATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTGGAGCTCAGGGCCTCTaGCCTGACGTGTTTGGCCAA | + |
Preference number: 4 (lower is better) Translates to: HLLFRAWTPTFRGSPSIAGAQGL*PDVFGQ Trigger: TTGGCCAAACACGTCAGGGCAGAGGCCCTGAGCTCC...AGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | GGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGATGTCAGGGTCCTCTaGAGCCCAGGGTGTTGTAGG | + |
Preference number: 4 (lower is better) Translates to: GHLLFRAWTPTFRGSPSIDVRVL*SPGCCR Trigger: CCTACAACACCCTGGGCTCCAGAGGACCCTGACATC...AATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CCA 90 bp | GAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCACCAGCTCCTCCAGAATaGGTTTTACTGGGCCCAGTG | + |
Preference number: 4 (lower is better) Translates to: EAIYCSEPGLPRLGGAPPPAPPE*VLLGPV Trigger: CACTGGGCCCAGTAAAACCCATTCTGGAGGAGCTGG...TGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | ATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTTGCTGCAGGGACTCCGTaGATAACTGCTGCCCCTGGC | + |
Preference number: 4 (lower is better) Translates to: IYCSEPGLPRLGGAPPLLAAGTP*ITAAPG Trigger: GCCAGGGGCAGCAGTTATCCACGGAGTCCCTGCAGC...AAGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | TGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAATGCATATAGTCGTAGCCTCTGGCAACTaGGGCAGGCAGGAGCCAGAC | + |
Preference number: 4 (lower is better) Translates to: WQVAELVVEGAHLQMHIVVASGN*GRQEPD Trigger: GTCTGGCTCCTGCCTGCCCCAGTTGCCAGAGGCTAC...GACTATATGCATTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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3UTR CAA 72 bp | TGCCCCCGTGGACCCCTCAAGTGGCAGGTGGCTGAGTaGGTCGTGGAGGGAGCACATCTTCAAATGCATATA | + |
Preference number: 4 (lower is better) Translates to: CPRGPLKWQVAE*VVEGAHLQMHI Trigger: TATATGCATTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCCACGGGGGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR TCA 90 bp | ATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTTAGGCAGAGGACCGCTTaGGGTTCAGGCACCAGTGCA | + |
Preference number: 4 (lower is better) Translates to: IYCSEPGLPRLGGAPPLLRQRTA*GSGTSA Trigger: TGCACTGGTGCCTGAACCTCAAGCGGTCCTCTGCCT...AAGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | TGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAATGCATATAGTCCCGGTGGAGACCTTCTaGAACTCCTGCTCGCTCAGC | + |
Preference number: 4 (lower is better) Translates to: WQVAELVVEGAHLQMHIVPVETF*NSCSLS Trigger: GCTGAGCGAGCAGGAGTTGCAGAAGGTCTCCACCGG...GACTATATGCATTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | AGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCTTTTACTGGGCCCAGTaGCTCCAGTTCACTCCTCAG | + |
Preference number: 4 (lower is better) Translates to: RGHLLFRAWTPTFRGSPSFYWAQ*LQFTPQ Trigger: CTGAGGAGTGAACTGGAGGCACTGGGCCCAGTAAAA...GGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR GCA 90 bp | ATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTTGACTCCGTGGATAACTaGTGCCCCTGGCTGGCACAG | + |
Preference number: 4 (lower is better) Translates to: IYCSEPGLPRLGGAPPLLDSVDN*CPWLAQ Trigger: CTGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTC...AAGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | CATTGCCCCCGTGGACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGACTTCGTGGATCTCTTTaGATTGCCAGATTGTCTTCA | + |
Preference number: 4 (lower is better) Translates to: HCPRGPLKWQVAELVVEGLRGSL*IARLSS Trigger: TGAAGACAATCTGGCAATCCAAAGAGATCCACGAAG...TCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCCACGGGGGCAATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CCA 90 bp | AAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAATGCATATATGTAGGGGAAGCAGGTaGCCCTGGCAGTGCCAGTGG | + |
Preference number: 4 (lower is better) Translates to: KWQVAELVVEGAHLQMHICRGSR*PWQCQW Trigger: CCACTGGCACTGCCAGGGCCACCTGCTTCCCCTACA...TATATGCATTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CCA 90 bp | GAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCACAGAATGGGTTTTACTaGGCCCAGTGCCTCCAGTTC | + |
Preference number: 4 (lower is better) Translates to: EAIYCSEPGLPRLGGAPPQNGFY*AQCLQF Trigger: GAACTGGAGGCACTGGGCCCAGTAAAACCCATTCTG...TGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | ATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCCCAGCTCCTCCAGAATaGGTTTTACTGGGCCCAGTG | + |
Preference number: 4 (lower is better) Translates to: MRGHLLFRAWTPTFRGSPPAPPE*VLLGPV Trigger: CACTGGGCCCAGTAAAACCCATTCTGGAGGAGCTGG...GGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCAT 56% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | ATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTTCTTGTGTAGCCTCTaGCAACTGGGGCAGGCAGGA | + |
Preference number: 4 (lower is better) Translates to: MRGHLLFRAWTPTFRGSPFLCSL*QLGQAG Trigger: TCCTGCCTGCCCCAGTTGCCAGAGGCTACACAAGAA...GGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | AAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAATGCATATACGAACGGCCTCGTCTTaGGCCAACCGAAGGGTGGAG | + |
Preference number: 4 (lower is better) Translates to: KWQVAELVVEGAHLQMHIRTASS*ANRRVE Trigger: CTCCACCCTTCGGTTGGCCCAAGACGAGGCCGTTCG...TATATGCATTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CCA 90 bp | GCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGTCAGCAGTAGGTTCTTaGCCCGAACGGCCTCGTCTT | + |
Preference number: 4 (lower is better) Translates to: AIYCSEPGLPRLGGAPPLSAVGS*PERPRL Trigger: AAGACGAGGCCGTTCGGGCCAAGAACCTACTGCTGA...CAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | GGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTTCAGCAGTAGGTTCTTaGCCCGAACGGCCTCGTCTT | + |
Preference number: 4 (lower is better) Translates to: GHLLFRAWTPTFRGSPSISAVGS*PERPRL Trigger: AAGACGAGGCCGTTCGGGCCAAGAACCTACTGCTGA...AATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | GAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCAGCATATAGTCCAAAGTaGCCACCTTCTCCTCCGGCT | + |
Preference number: 4 (lower is better) Translates to: EAIYCSEPGLPRLGGAPPAYSPK*PPSPPA Trigger: AGCCGGAGGAGAAGGTGGCCACTTTGGACTATATGC...TGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208475.2 |
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CDS-3UTR TCA 90 bp | GGACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAATTTCCTTCAAGCTGGTaGTGGAGTCTTTGGCACGTA | + |
Preference number: 4 (lower is better) Translates to: GPLKWQVAELVVEGAHLQFPSSW*WSLWHV Trigger: TACGTGCCAAAGACTCCATCACCAGCTTGAAGGAAA...TTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | GCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTGAACGGGTCACCTTaGGGCAGTTCTCCTTCAACT | + |
Preference number: 4 (lower is better) Translates to: AIYCSEPGLPRLGGAPPLLNGSP*GSSPST Trigger: AGTTGAAGGAGAACTGCCGCAAGGTGACCCGTTCAG...CAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CCA 90 bp | CATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTTTCTTGTGTAGCCTCTaGCAACTGGGGCAGGCAGGA | + |
Preference number: 4 (lower is better) Translates to: HLLFRAWTPTFRGSPSIAFLCSL*QLGQAG Trigger: TCCTGCCTGCCCCAGTTGCCAGAGGCTACACAAGAA...AGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | AGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCTGGCTGAGTTGGTCGTaGAGGGAGCACATCTTCAAA | + |
Preference number: 4 (lower is better) Translates to: RGHLLFRAWTPTFRGSPSWLSWS*REHIFK Trigger: TTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCA...GGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208475.2 |
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CDS-3UTR GCA 90 bp | AAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAATGCATATAAGGTTCAGGCACCAGTaGATCGGCTCGTGGGACATC | + |
Preference number: 4 (lower is better) Translates to: KWQVAELVVEGAHLQMHIRFRHQ*IGSWDI Trigger: GATGTCCCACGAGCCGATGCACTGGTGCCTGAACCT...TATATGCATTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | CATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTTTTTACTGGGCCCAGTaGCTCCAGTTCACTCCTCAG | + |
Preference number: 4 (lower is better) Translates to: HLLFRAWTPTFRGSPSIAFYWAQ*LQFTPQ Trigger: CTGAGGAGTGAACTGGAGGCACTGGGCCCAGTAAAA...AGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CCA 90 bp | AGCATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCAGAATGGGTTTTACTaGGCCCAGTGCCTCCAGTTC | + |
Preference number: 4 (lower is better) Translates to: SMRGHLLFRAWTPTFRGSQNGFY*AQCLQF Trigger: GAACTGGAGGCACTGGGCCCAGTAAAACCCATTCTG...GCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCATGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR TCA 90 bp | AGCATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCGTACCAATCCACTGTTaGCCCCACTCAGTAGTTCTG | + |
Preference number: 4 (lower is better) Translates to: SMRGHLLFRAWTPTFRGSVPIHC*PHSVVL Trigger: CAGAACTACTGAGTGGGGTCAACAGTGGATTGGTAC...GCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCATGCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | GCCAGCATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGTCATCCTGCAGTTGCTaGTGGAGGTATCTTAGCTTC | + |
Preference number: 4 (lower is better) Translates to: ASMRGHLLFRAWTPTFRGSSCSC*WRYLSF Trigger: GAAGCTAAGATACCTCCAGCAGCAACTGCAGGATGA...CCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCATGCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | TCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAATGCATACCAGCCTCCAGTTTTTaGTCCAACTCCTGCAACTCG | + |
Preference number: 4 (lower is better) Translates to: SSGRWLSWSWREHIFKCIPASSF*SNSCNS Trigger: CGAGTTGCAGGAGTTGGAGCAAAAACTGGAGGCTGG...TATGCATTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR GCA 90 bp | ATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTGGATCTCTTTGGATTaGCAGATTGTCTTCACCACC | + |
Preference number: 4 (lower is better) Translates to: MRGHLLFRAWTPTFRGSPWISLD*QIVFTT Trigger: GGTGGTGAAGACAATCTGGCAATCCAAAGAGATCCA...GGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS GCA 90 bp | AGCCACTGGAGGACAGGCCTCGCTGCCGCGGGGGTTCCTCGGGGCTaGCAGGAGGACCCGAGCAGCCCTGAATGGGAGTGGCAGGGCTCA | + |
Preference number: 5 (lower is better) Translates to: SHWRTGLAAAGVPRG*QEDPSSPEWEWQGS Trigger: TGAGCCCTGCCACTCCCATTCAGGGCTGCTCGGGTCCTCCTGGCAGCCCCGAGGAACCCCCGCGGCAGCGAGGCCTGTCCTCCAGTGGCT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS GCA 90 bp | ACTCCTGCTCGCTCAGCGAGGGTCCCTCCCCTGTGCGGACTGCCATaGCCCAGCCACTGGAGGACAGGCCTCGCTGCCGCGGGGGTTCCT | + |
Preference number: 5 (lower is better) Translates to: TPARSARVPPLCGLP*PSHWRTGLAAAGVP Trigger: AGGAACCCCCGCGGCAGCGAGGCCTGTCCTCCAGTGGCTGGGGCATGGCAGTCCGCACAGGGGAGGGACCCTCGCTGAGCGAGCAGGAGT 71% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CCA 90 bp | GCGGGGGTTCCTCGGGGCTGCCAGGAGGACCCGAGCAGCCCTGAATaGGAGTGGCAGGGCTCAGACCATGTCGGGAGAGGCCAGCCTCCA | + |
Preference number: 5 (lower is better) Translates to: AGVPRGCQEDPSSPE*EWQGSDHVGRGQPP Trigger: TGGAGGCTGGCCTCTCCCGACATGGTCTGAGCCCTGCCACTCCCATTCAGGGCTGCTCGGGTCCTCCTGGCAGCCCCGAGGAACCCCCGC 70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CCA 90 bp | AAGCCCCTTGCGGACTGTGCCTGTTCCCGCTGCGCCCGCTCCCACTaGCCCAGGAAGCCATCCAGACGGCCGCCAAGGCCTCCCAGCAAC | + |
Preference number: 5 (lower is better) Translates to: KPLADCACSRCARSH*PRKPSRRPPRPPSN Trigger: GTTGCTGGGAGGCCTTGGCGGCCGTCTGGATGGCTTCCTGGGCCAGTGGGAGCGGGCGCAGCGGGAACAGGCACAGTCCGCAAGGGGCTT 70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CCA 90 bp | AGGGTGGAGCTCAGGGCCTCTGCCCTGACGTGTTTGGCCAAGGCCTaGCGCTCCAGCTCCTGGGGAGAGGAGTGTAGGCGCCGCTGGGCT | + |
Preference number: 5 (lower is better) Translates to: RVELRASALTCLAKA*RSSSWGEECRRRWA Trigger: AGCCCAGCGGCGCCTACACTCCTCTCCCCAGGAGCTGGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGAGGCCCTGAGCTCCACCCT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208475.2 |
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CDS TCA 90 bp | CCTCGTCTTGGGCCAACCGAAGGGTGGAGCTCAGGGCCTCTGCCCTaGCGTGTTTGGCCAAGGCCTGGCGCTCCAGCTCCTGGGGAGAGG | + |
Preference number: 5 (lower is better) Translates to: PRLGPTEGWSSGPLP*RVWPRPGAPAPGER Trigger: CCTCTCCCCAGGAGCTGGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCGGTTGGCCCAAGACGAGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000208475.2 |
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CDS GCA 90 bp | TCCCTCCTCAGCTCCTCCAGGCCGGTGGAGACCTTCTGCAACTCCTaGTCGCTCAGCGAGGGTCCCTCCCCTGTGCGGACTGCCATGCCC | + |
Preference number: 5 (lower is better) Translates to: SLLSSSRPVETFCNS*SLSEGPSPVRTAMP Trigger: GGGCATGGCAGTCCGCACAGGGGAGGGACCCTCGCTGAGCGAGCAGGAGTTGCAGAAGGTCTCCACCGGCCTGGAGGAGCTGAGGAGGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS GCA 90 bp | GTCAGCGCACGTTCCAGCAGCTGCTGCAGGGACTCCGTGGATAACTaGTGCCCCTGGCTGGCACAGCGCGCACAGGGGCCTTGGGCAGAC | + |
Preference number: 5 (lower is better) Translates to: VSARSSSCCRDSVDN*CPWLAQRAQGPWAD Trigger: GTCTGCCCAAGGCCCCTGTGCGCGCTGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTGCAGCAGCTGCTGGAACGTGCGCTGAC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS GCA 90 bp | AACGGCCTCGTCTTGGGCCAACCGAAGGGTGGAGCTCAGGGCCTCTaGCCTGACGTGTTTGGCCAAGGCCTGGCGCTCCAGCTCCTGGGG | + |
Preference number: 5 (lower is better) Translates to: NGLVLGQPKGGAQGL*PDVFGQGLALQLLG Trigger: CCCCAGGAGCTGGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCGGTTGGCCCAAGACGAGGCCGTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208475.2 |
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CDS CCA 90 bp | GGGAAGCAGGTGGCCCTGGCAGTGCCAGTGGACCACTGTCCTCTGTaGTCGAGTCTGTGCCCGAGGAGTCGGGCTCCACGGCAGCCAGGT | + |
Preference number: 5 (lower is better) Translates to: GKQVALAVPVDHCPL*SSLCPRSRAPRQPG Trigger: ACCTGGCTGCCGTGGAGCCCGACTCCTCGGGCACAGACTCGACCACAGAGGACAGTGGTCCACTGGCACTGCCAGGGCCACCTGCTTCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000207719.2 |
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CDS CCA 90 bp | GCCTCTGCCCTGACGTGTTTGGCCAAGGCCTGGCGCTCCAGCTCCTaGGGAGAGGAGTGTAGGCGCCGCTGGGCTTACTGGACTGGGCAG | + |
Preference number: 5 (lower is better) Translates to: ASALTCLAKAWRSSS*GEECRRRWAYWTGQ Trigger: CTGCCCAGTCCAGTAAGCCCAGCGGCGCCTACACTCCTCTCCCCAGGAGCTGGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGAGGC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208475.2 |
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CDS GCA 90 bp | GAGGACACCTCCCTCCTCAGCTCCTCCAGGCCGGTGGAGACCTTCTaGAACTCCTGCTCGCTCAGCGAGGGTCCCTCCCCTGTGCGGACT | + |
Preference number: 5 (lower is better) Translates to: EDTSLLSSSRPVETF*NSCSLSEGPSPVRT Trigger: AGTCCGCACAGGGGAGGGACCCTCGCTGAGCGAGCAGGAGTTGCAGAAGGTCTCCACCGGCCTGGAGGAGCTGAGGAGGGAGGTGTCCTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS GCA 90 bp | TTCACCTCATCCACCAGCGGGGTCAGCGCACGTTCCAGCAGCTGCTaGAGGGACTCCGTGGATAACTGCTGCCCCTGGCTGGCACAGCGC | + |
Preference number: 5 (lower is better) Translates to: FTSSTSGVSARSSSC*RDSVDNCCPWLAQR Trigger: GCGCTGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTGCAGCAGCTGCTGGAACGTGCGCTGACCCCGCTGGTGGATGAGGTGAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS CCA 90 bp | CCAGCAGCTGCTGCAGGGACTCCGTGGATAACTGCTGCCCCTGGCTaGCACAGCGCGCACAGGGGCCTTGGGCAGACCGATCCAAGTTCA | + |
Preference number: 5 (lower is better) Translates to: PAAAAGTPWITAAPG*HSAHRGLGQTDPSS Trigger: TGAACTTGGATCGGTCTGCCCAAGGCCCCTGTGCGCGCTGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTGCAGCAGCTGCTGG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS GCA 90 bp | GACACGTTGGTGCAGGCAGAGGACCGCTTGAGGTTCAGGCACCAGTaGATCGGCTCGTGGGACATCCGGGGCTCCACCCCATGGAAGGAC | + |
Preference number: 5 (lower is better) Translates to: DTLVQAEDRLRFRHQ*IGSWDIRGSTPWKD Trigger: GTCCTTCCATGGGGTGGAGCCCCGGATGTCCCACGAGCCGATGCACTGGTGCCTGAACCTCAAGCGGTCCTCTGCCTGCACCAACGTGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS GCA 90 bp | CTCTCCACCATAGTGCACAACTCATCTGCTCGTCCTCGCAGCTCCTaGAAGCCCCTTGCGGACTGTGCCTGTTCCCGCTGCGCCCGCTCC | + |
Preference number: 5 (lower is better) Translates to: LSTIVHNSSARPRSS*KPLADCACSRCARS Trigger: GGAGCGGGCGCAGCGGGAACAGGCACAGTCCGCAAGGGGCTTGCAGGAGCTGCGAGGACGAGCAGATGAGTTGTGCACTATGGTGGAGAG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS GCA 90 bp | TGCTTCACCTCATCCACCAGCGGGGTCAGCGCACGTTCCAGCAGCTaGTGCAGGGACTCCGTGGATAACTGCTGCCCCTGGCTGGCACAG | + |
Preference number: 5 (lower is better) Translates to: CFTSSTSGVSARSSS*CRDSVDNCCPWLAQ Trigger: CTGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTGCAGCAGCTGCTGGAACGTGCGCTGACCCCGCTGGTGGATGAGGTGAAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS GCA 90 bp | AACGGCCTCGTCTTGGGCCAACCGAAGGGTGGAGCTCAGGGCCTCTaGCCTGACGTGTTTGGCCAAGGCCTGGCGCTCCAGCTCCAGAAT | + |
Preference number: 5 (lower is better) Translates to: NGLVLGQPKGGAQGL*PDVFGQGLALQLQN Trigger: ATTCTGGAGCTGGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCGGTTGGCCCAAGACGAGGCCGTT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CCA 90 bp | AGGGTCCTCTGGAGCCCAGGGTGTTGTAGGGGAAGCAGGTGGCCCTaGCAGTGCCAGTGGACCACTGTCCTCTGTGGTCGAGTCTGTGCC | + |
Preference number: 5 (lower is better) Translates to: RVLWSPGCCRGSRWP*QCQWTTVLCGRVCA Trigger: GGCACAGACTCGACCACAGAGGACAGTGGTCCACTGGCACTGCCAGGGCCACCTGCTTCCCCTACAACACCCTGGGCTCCAGAGGACCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000207719.2 |
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CDS CCA 90 bp | GTTCCTCGGGGCTGCCAGGAGGACCCGAGCAGCCCTGAATGGGAGTaGCAGGGCTCAGACCATGTCGGGAGAGGCCAGCCTCCAGTTTTT | + |
Preference number: 5 (lower is better) Translates to: VPRGCQEDPSSPEWE*QGSDHVGRGQPPVF Trigger: AAAAACTGGAGGCTGGCCTCTCCCGACATGGTCTGAGCCCTGCCACTCCCATTCAGGGCTGCTCGGGTCCTCCTGGCAGCCCCGAGGAAC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS TCA 90 bp | CCTCGTCTTGGGCCAACCGAAGGGTGGAGCTCAGGGCCTCTGCCCTaGCGTGTTTGGCCAAGGCCTGGCGCTCCAGCTCCAGAATCTTCT | + |
Preference number: 5 (lower is better) Translates to: PRLGPTEGWSSGPLP*RVWPRPGAPAPESS Trigger: AGAAGATTCTGGAGCTGGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCGGTTGGCCCAAGACGAGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CCA 90 bp | GATGTCAGGGTCCTCTGGAGCCCAGGGTGTTGTAGGGGAAGCAGGTaGCCCTGGCAGTGCCAGTGGACCACTGTCCTCTGTGGTCGAGTC | + |
Preference number: 5 (lower is better) Translates to: DVRVLWSPGCCRGSR*PWQCQWTTVLCGRV Trigger: GACTCGACCACAGAGGACAGTGGTCCACTGGCACTGCCAGGGCCACCTGCTTCCCCTACAACACCCTGGGCTCCAGAGGACCCTGACATC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000207719.2 |
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CDS CCA 90 bp | ATCTTGTCCGTCAGCAGTAGGTTCTTGGCCCGAACGGCCTCGTCTTaGGCCAACCGAAGGGTGGAGCTCAGGGCCTCTGCCCTGACGTGT | + |
Preference number: 5 (lower is better) Translates to: ILSVSSRFLARTASS*ANRRVELRASALTC Trigger: ACACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCGGTTGGCCCAAGACGAGGCCGTTCGGGCCAAGAACCTACTGCTGACGGACAAGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS CCA 90 bp | AGCTGGGCACGGCTTTCTACCCCCGCAGGTGGGTCCCCCGCTTCGTaGATCTCTTTGGATTGCCAGATTGTCTTCACCACCACGCTTGCC | + |
Preference number: 5 (lower is better) Translates to: SWARLSTPAGGSPAS*ISLDCQIVFTTTLA Trigger: GGCAAGCGTGGTGGTGAAGACAATCTGGCAATCCAAAGAGATCCACGAAGCGGGGGACCCACCTGCGGGGGTAGAAAGCCGTGCCCAGCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS-3UTR CAA 90 bp | GAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCAGCGCGCACAGGGGCCTaGGGCAGACCGATCCAAGTT | + |
Preference number: 5 (lower is better) Translates to: EAIYCSEPGLPRLGGAPPARTGA*GRPIQV Trigger: AACTTGGATCGGTCTGCCCAAGGCCCCTGTGCGCGC...TGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CAA 90 bp | AGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCCCGAACGGCCTCGTCTaGGGCCAACCGAAGGGTGGA | + |
Preference number: 5 (lower is better) Translates to: RGHLLFRAWTPTFRGSPSPNGLV*GQPKGG Trigger: TCCACCCTTCGGTTGGCCCAAGACGAGGCCGTTCGG...GGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CAA 90 bp | CATTGCCCCCGTGGACCCCTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGACACTCCGGCTTCATCTaGTCCGTCAGCAGTAGGTTC | + |
Preference number: 5 (lower is better) Translates to: HCPRGPLKWQVAELVVEGHSGFI*SVSSRF Trigger: GAACCTACTGCTGACGGACAAGATGAAGCCGGAGTG...TCCCTCCACGACCAACTCAGCCACCTGCCACTTGAGGGGTCCACGGGGGCAATG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CAA 90 bp | GCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGGCGCGCACAGGGGCCTaGGGCAGACCGATCCAAGTT | + |
Preference number: 5 (lower is better) Translates to: AIYCSEPGLPRLGGAPPLARTGA*GRPIQV Trigger: AACTTGGATCGGTCTGCCCAAGGCCCCTGTGCGCGC...CAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CAA 90 bp | GCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGTCTGCCCTGACGTGTTaGGCCAAGGCCTGGCGCTCC | + |
Preference number: 5 (lower is better) Translates to: AIYCSEPGLPRLGGAPPLSALTC*AKAWRS Trigger: GGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGA...CAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CAA 90 bp | GCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCCGAACGGCCTCGTCTaGGGCCAACCGAAGGGTGGA | + |
Preference number: 5 (lower is better) Translates to: AIYCSEPGLPRLGGAPPLPNGLV*GQPKGG Trigger: TCCACCCTTCGGTTGGCCCAAGACGAGGCCGTTCGG...CAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CAA 90 bp | ATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCCCGGGAGTTCTGAAGTaGCCGTCCCAGCTCCTCCAG | + |
Preference number: 5 (lower is better) Translates to: MRGHLLFRAWTPTFRGSPPGVLK*PSQLLQ Trigger: CTGGAGGAGCTGGGACGGCAACTTCAGAACTCCCGG...GGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCAT 59% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CAA 90 bp | ATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTTGAGCAAGGACACGTaGGTGCAGGCAGAGGACCGC | + |
Preference number: 5 (lower is better) Translates to: MRGHLLFRAWTPTFRGSPLSKDT*VQAEDR Trigger: GCGGTCCTCTGCCTGCACCAACGTGTCCTTGCTCAA...GGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CAA 90 bp | ATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTTGCTCCTGCAAGCCCCTaGCGGACTGTGCCTGTTCCC | + |
Preference number: 5 (lower is better) Translates to: IYCSEPGLPRLGGAPPLLAPASP*RTVPVP Trigger: GGGAACAGGCACAGTCCGCAAGGGGCTTGCAGGAGC...AAGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CAA 90 bp | AGCATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCGGGAGTTCTGAAGTaGCCGTCCCAGCTCCTCCAG | + |
Preference number: 5 (lower is better) Translates to: SMRGHLLFRAWTPTFRGSPGVLK*PSQLLQ Trigger: CTGGAGGAGCTGGGACGGCAACTTCAGAACTCCCGG...GCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCATGCT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CAA 90 bp | TGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAATGCATATAGTCTCTGCCCTGACGTGTTaGGCCAAGGCCTGGCGCTCC | + |
Preference number: 5 (lower is better) Translates to: WQVAELVVEGAHLQMHIVSALTC*AKAWRS Trigger: GGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGA...GACTATATGCATTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CAA 90 bp | ATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTGGCAGGTGGCTGAGTaGGTCGTGGAGGGAGCACAT | + |
Preference number: 5 (lower is better) Translates to: MRGHLLFRAWTPTFRGSPWQVAE*VVEGAH Trigger: ATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCA...GGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208475.2 |
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CDS-3UTR CAA 90 bp | CTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAATGCATGTCAGCAGTAGGTTCTaGGCCCGAACGGCCTCGTCT | + |
Preference number: 5 (lower is better) Translates to: LKWQVAELVVEGAHLQMHVSSRF*ARTASS Trigger: AGACGAGGCCGTTCGGGCCAAGAACCTACTGCTGAC...ATGCATTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CAA 90 bp | CATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTGTCAGCAGTAGGTTCTaGGCCCGAACGGCCTCGTCT | + |
Preference number: 5 (lower is better) Translates to: HLLFRAWTPTFRGSPSIAVSSRF*ARTASS Trigger: AGACGAGGCCGTTCGGGCCAAGAACCTACTGCTGAC...AGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000208475.2 |
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CDS-3UTR CAA 90 bp | ATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTTTTTCGTTATCCCTTaGGCAGGGCTGGTCACCCCC | + |
Preference number: 5 (lower is better) Translates to: MRGHLLFRAWTPTFRGSPFFVIP*AGLVTP Trigger: GGGGGTGACCAGCCCTGCCAAAGGGATAACGAAAAA...GGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CAA 90 bp | AAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAATGCATATACAGGCAGAGGACCGCTaGAGGTTCAGGCACCAGTGC | + |
Preference number: 5 (lower is better) Translates to: KWQVAELVVEGAHLQMHIQAEDR*RFRHQC Trigger: GCACTGGTGCCTGAACCTCAAGCGGTCCTCTGCCTG...TATATGCATTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CAA 90 bp | GAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCACTGGTGATGGAGTCTTaGGCACGTACCAATCCACTG | + |
Preference number: 5 (lower is better) Translates to: EAIYCSEPGLPRLGGAPPLVMES*ARTNPL Trigger: CAGTGGATTGGTACGTGCCAAAGACTCCATCACCAG...TGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CAA 90 bp | GCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGGCCAGCCTCCAGTTTTaGCTCCAACTCCTGCAACTC | + |
Preference number: 5 (lower is better) Translates to: AIYCSEPGLPRLGGAPPLASLQF*LQLLQL Trigger: GAGTTGCAGGAGTTGGAGCAAAAACTGGAGGCTGGC...CAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CAA 90 bp | GCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTTTGGATTGCCAGATaGTCTTCACCACCACGCTTG | + |
Preference number: 5 (lower is better) Translates to: AIYCSEPGLPRLGGAPPLLWIAR*SSPPRL Trigger: CAAGCGTGGTGGTGAAGACAATCTGGCAATCCAAAG...CAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CAA 90 bp | ATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTTACTGAACGGGTCACCTaGCGGCAGTTCTCCTTCAAC | + |
Preference number: 5 (lower is better) Translates to: IYCSEPGLPRLGGAPPLLTERVT*RQFSFN Trigger: GTTGAAGGAGAACTGCCGCAAGGTGACCCGTTCAGT...AAGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CAA 90 bp | ATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCAGCTCCAGAATCTTCTaGTGTAGCCTCTGGCAACTG | + |
Preference number: 5 (lower is better) Translates to: MRGHLLFRAWTPTFRGSPSSRIF*CSLWQL Trigger: CAGTTGCCAGAGGCTACACAAGAAGATTCTGGAGCT...GGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CAA 90 bp | ATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTTTCCTCCGGCTTCATCTaGTCCGTCAGCAGTAGGTTC | + |
Preference number: 5 (lower is better) Translates to: IYCSEPGLPRLGGAPPLLSSGFI*SVSSRF Trigger: GAACCTACTGCTGACGGACAAGATGAAGCCGGAGGA...AAGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000208475.2 |
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CDS-3UTR CAA 90 bp | AGCATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCTGGGCAGAATCTTCTaGTGTAGCCTCTGGCAACTG | + |
Preference number: 5 (lower is better) Translates to: SMRGHLLFRAWTPTFRGSLGRIF*CSLWQL Trigger: CAGTTGCCAGAGGCTACACAAGAAGATTCTGCCCAG...GCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCATGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000208475.2 |
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CDS TCA 90 bp | GCTTCTCCTCCAGCAAGGCAGAGTTCTGCTTCAGGACATTGGTTTTaGTTTCAGCGTCTTCCACTGAACGGGTCACCTTGCGGCAGTTCT | + |
Preference number: 5 (lower is better) Translates to: ASPPARQSSASGHWF*FQRLPLNGSPCGSS Trigger: AGAACTGCCGCAAGGTGACCCGTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGAACTCTGCCTTGCTGGAGGAGAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS TCA 90 bp | AGAGTTCTGCTTCAGGACATTGGTTTTGATTTCAGCGTCTTCCACTaGACGGGTCACCTTGCGGCAGTTCTCCTGGGTCAGGACATCAGG | + |
Preference number: 5 (lower is better) Translates to: RVLLQDIGFDFSVFH*TGHLAAVLLGQDIR Trigger: CCTGATGTCCTGACCCAGGAGAACTGCCGCAAGGTGACCCGTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGAACTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120929.9 |
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CDS-3UTR CAA 90 bp | CTCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAATGCATGCTTCGTGGATCTCTTaGGATTGCCAGATTGTCTTC | + |
Preference number: 5 (lower is better) Translates to: LKWQVAELVVEGAHLQMHASWIS*DCQIVF Trigger: GAAGACAATCTGGCAATCCAAAGAGATCCACGAAGC...ATGCATTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS GCA 90 bp | TGCTGCTGGAGGTATCTTAGCTTCTCCTCCAGCAAGGCAGAGTTCTaGTTCAGGACATTGGTTTTGATTTCAGCGTCTTCCACTGAACGG | + |
Preference number: 5 (lower is better) Translates to: CCWRYLSFSSSKAEF*FRTLVLISASSTER Trigger: CCGTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGAACTCTGCCTTGCTGGAGGAGAAGCTAAGATACCTCCAGCAGCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS-3UTR CAA 90 bp | TCAAGTGGCAGGTGGCTGAGTTGGTCGTGGAGGGAGCACATCTTCAAATGCATAGTGGATCTCTTTGGATaGCCAGATTGTCTTCACCAC | + |
Preference number: 5 (lower is better) Translates to: SSGRWLSWSWREHIFKCIVDLFG*PDCLHH Trigger: GTGGTGAAGACAATCTGGCAATCCAAAGAGATCCAC...TATGCATTTGAAGATGTGCTCCCTCCACGACCAACTCAGCCACCTGCCACTTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CAA 90 bp | GCCAGCATGAGAGGCCATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGTTCAGGACATTGGTTTaGATTTCAGCGTCTTCCACT | + |
Preference number: 5 (lower is better) Translates to: ASMRGHLLFRAWTPTFRGFRTLV*ISASST Trigger: AGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAA...CCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATGGCCTCTCATGCTGGC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS TCA 90 bp | AGAGTTCTGCTTCAGGACATTGGTTTTGATTTCAGCGTCTTCCACTaGACGGGTCACCTTGCGGCAGTTCTCCTTCAACTGACTGCAGTA | + |
Preference number: 5 (lower is better) Translates to: RVLLQDIGFDFSVFH*TGHLAAVLLQLTAV Trigger: TACTGCAGTCAGTTGAAGGAGAACTGCCGCAAGGTGACCCGTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGAACTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS-3UTR CAA 90 bp | CATTTATTGTTCAGAGCCTGGACTCCCACGTTTAGGGGGAGCCCCTCCATTGCTTTCTGCTTCAGGACATaGGTTTTGATTTCAGCGTCT | + |
Preference number: 5 (lower is better) Translates to: HLLFRAWTPTFRGSPSIAFCFRT*VLISAS Trigger: AGACGCTGAAATCAAAACCAATGTCCTGAAGCAGAA...AGCAATGGAGGGGCTCCCCCTAAACGTGGGAGTCCAGGCTCTGAACAATAAATG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS GCA 72 bp | CGCTCAGCGAGGGTCCCTCCCCTGTGCGGACTGCCATaGCCCAGCCACTGGAGGACAGGCCTCGCTGCCGCG | + |
Preference number: 6 (lower is better) Translates to: RSARVPPLCGLP*PSHWRTGLAAA Trigger: CGCGGCAGCGAGGCCTGTCCTCCAGTGGCTGGGGCATGGCAGTCCGCACAGGGGAGGGACCCTCGCTGAGCG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS GCA 72 bp | CTGCTCGCTCAGCGAGGGTCCCTCCCCTGTGCGGACTaGCATGCCCCAGCCACTGGAGGACAGGCCTCGCTG | + |
Preference number: 6 (lower is better) Translates to: LLAQRGSLPCAD*HAPATGGQASL Trigger: CAGCGAGGCCTGTCCTCCAGTGGCTGGGGCATGGCAGTCCGCACAGGGGAGGGACCCTCGCTGAGCGAGCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CCA 72 bp | CCTCGGGGCTGCCAGGAGGACCCGAGCAGCCCTGAATaGGAGTGGCAGGGCTCAGACCATGTCGGGAGAGGC | + |
Preference number: 6 (lower is better) Translates to: PRGCQEDPSSPE*EWQGSDHVGRG Trigger: GCCTCTCCCGACATGGTCTGAGCCCTGCCACTCCCATTCAGGGCTGCTCGGGTCCTCCTGGCAGCCCCGAGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS TCA 72 bp | GGGCCAACCGAAGGGTGGAGCTCAGGGCCTCTGCCCTaGCGTGTTTGGCCAAGGCCTGGCGCTCCAGCTCCA | + |
Preference number: 6 (lower is better) Translates to: GPTEGWSSGPLP*RVWPRPGAPAP Trigger: TGGAGCTGGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCGGTTGGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS TCA 72 bp | GGGCCAACCGAAGGGTGGAGCTCAGGGCCTCTGCCCTaGCGTGTTTGGCCAAGGCCTGGCGCTCCAGCTCCT | + |
Preference number: 6 (lower is better) Translates to: GPTEGWSSGPLP*RVWPRPGAPAP Trigger: AGGAGCTGGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCGGTTGGCCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000208475.2 |
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CDS GCA 72 bp | CTCATCTGCTCGTCCTCGCAGCTCCTGCAAGCCCCTTaGGGACTGTGCCTGTTCCCGCTGCGCCCGCTCCCA | + |
Preference number: 6 (lower is better) Translates to: LICSSSQLLQAP*GLCLFPLRPLP Trigger: TGGGAGCGGGCGCAGCGGGAACAGGCACAGTCCGCAAGGGGCTTGCAGGAGCTGCGAGGACGAGCAGATGAG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS GCA 72 bp | TCCAGCAGCTGCTGCAGGGACTCCGTGGATAACTGCTaGCCCTGGCTGGCACAGCGCGCACAGGGGCCTTGG | + |
Preference number: 6 (lower is better) Translates to: SSSCCRDSVDNC*PWLAQRAQGPW Trigger: CCAAGGCCCCTGTGCGCGCTGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTGCAGCAGCTGCTGGA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS GCA 72 bp | CGTTCCAGCAGCTGCTGCAGGGACTCCGTGGATAACTaGTGCCCCTGGCTGGCACAGCGCGCACAGGGGCCT | + |
Preference number: 6 (lower is better) Translates to: RSSSCCRDSVDN*CPWLAQRAQGP Trigger: AGGCCCCTGTGCGCGCTGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTGCAGCAGCTGCTGGAACG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS CCA 72 bp | GGCTGCCAGGAGGACCCGAGCAGCCCTGAATGGGAGTaGCAGGGCTCAGACCATGTCGGGAGAGGCCAGCCT | + |
Preference number: 6 (lower is better) Translates to: GCQEDPSSPEWE*QGSDHVGRGQP Trigger: AGGCTGGCCTCTCCCGACATGGTCTGAGCCCTGCCACTCCCATTCAGGGCTGCTCGGGTCCTCCTGGCAGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CCA 72 bp | GCTGCAGGGACTCCGTGGATAACTGCTGCCCCTGGCTaGCACAGCGCGCACAGGGGCCTTGGGCAGACCGAT | + |
Preference number: 6 (lower is better) Translates to: AAGTPWITAAPG*HSAHRGLGQTD Trigger: ATCGGTCTGCCCAAGGCCCCTGTGCGCGCTGTGCCAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTGCAGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS TCA 72 bp | CTGTGCCCGAGGAGTCGGGCTCCACGGCAGCCAGGTTaGGCAAGGACACGTTGGTGCAGGCAGAGGACCGCT | + |
Preference number: 6 (lower is better) Translates to: LCPRSRAPRQPG*ARTRWCRQRTA Trigger: AGCGGTCCTCTGCCTGCACCAACGTGTCCTTGCTCAACCTGGCTGCCGTGGAGCCCGACTCCTCGGGCACAG 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000207719.2 |
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CDS GCA 72 bp | GTGCAGGCAGAGGACCGCTTGAGGTTCAGGCACCAGTaGATCGGCTCGTGGGACATCCGGGGCTCCACCCCA | + |
Preference number: 6 (lower is better) Translates to: VQAEDRLRFRHQ*IGSWDIRGSTP Trigger: TGGGGTGGAGCCCCGGATGTCCCACGAGCCGATGCACTGGTGCCTGAACCTCAAGCGGTCCTCTGCCTGCAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS GCA 72 bp | AGCTCCTCCAGGCCGGTGGAGACCTTCTGCAACTCCTaGTCGCTCAGCGAGGGTCCCTCCCCTGTGCGGACT | + |
Preference number: 6 (lower is better) Translates to: SSSRPVETFCNS*SLSEGPSPVRT Trigger: AGTCCGCACAGGGGAGGGACCCTCGCTGAGCGAGCAGGAGTTGCAGAAGGTCTCCACCGGCCTGGAGGAGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS GCA 72 bp | TCCACCAGCGGGGTCAGCGCACGTTCCAGCAGCTGCTaGAGGGACTCCGTGGATAACTGCTGCCCCTGGCTG | + |
Preference number: 6 (lower is better) Translates to: STSGVSARSSSC*RDSVDNCCPWL Trigger: CAGCCAGGGGCAGCAGTTATCCACGGAGTCCCTGCAGCAGCTGCTGGAACGTGCGCTGACCCCGCTGGTGGA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS GCA 72 bp | GTCTTGGGCCAACCGAAGGGTGGAGCTCAGGGCCTCTaGCCTGACGTGTTTGGCCAAGGCCTGGCGCTCCAG | + |
Preference number: 6 (lower is better) Translates to: VLGQPKGGAQGL*PDVFGQGLALQ Trigger: CTGGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCGGTTGGCCCAAGAC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS GCA 72 bp | TCATCCACCAGCGGGGTCAGCGCACGTTCCAGCAGCTaGTGCAGGGACTCCGTGGATAACTGCTGCCCCTGG | + |
Preference number: 6 (lower is better) Translates to: SSTSGVSARSSS*CRDSVDNCCPW Trigger: CCAGGGGCAGCAGTTATCCACGGAGTCCCTGCAGCAGCTGCTGGAACGTGCGCTGACCCCGCTGGTGGATGA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS CCA 72 bp | GTCAGCAGTAGGTTCTTGGCCCGAACGGCCTCGTCTTaGGCCAACCGAAGGGTGGAGCTCAGGGCCTCTGCC | + |
Preference number: 6 (lower is better) Translates to: VSSRFLARTASS*ANRRVELRASA Trigger: GGCAGAGGCCCTGAGCTCCACCCTTCGGTTGGCCCAAGACGAGGCCGTTCGGGCCAAGAACCTACTGCTGAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS CAA 90 bp | GCAGCCAGGTTGAGCAAGGACACGTTGGTGCAGGCAGAGGACCGCTaGAGGTTCAGGCACCAGTGCATCGGCTCGTGGGACATCCGGGGC | + |
Preference number: 6 (lower is better) Translates to: AARLSKDTLVQAEDR*RFRHQCIGSWDIRG Trigger: GCCCCGGATGTCCCACGAGCCGATGCACTGGTGCCTGAACCTCAAGCGGTCCTCTGCCTGCACCAACGTGTCCTTGCTCAACCTGGCTGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CAA 90 bp | CCCGAGGAGTCGGGCTCCACGGCAGCCAGGTTGAGCAAGGACACGTaGGTGCAGGCAGAGGACCGCTTGAGGTTCAGGCACCAGTGCATC | + |
Preference number: 6 (lower is better) Translates to: PEESGSTAARLSKDT*VQAEDRLRFRHQCI Trigger: GATGCACTGGTGCCTGAACCTCAAGCGGTCCTCTGCCTGCACCAACGTGTCCTTGCTCAACCTGGCTGCCGTGGAGCCCGACTCCTCGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000207719.2 |
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CDS CCA 72 bp | GACCGCTTGAGGTTCAGGCACCAGTGCATCGGCTCGTaGGACATCCGGGGCTCCACCCCATGGAAGGACACA | + |
Preference number: 6 (lower is better) Translates to: DRLRFRHQCIGS*DIRGSTPWKDT Trigger: TGTGTCCTTCCATGGGGTGGAGCCCCGGATGTCCCACGAGCCGATGCACTGGTGCCTGAACCTCAAGCGGTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CAA 90 bp | TGGGCCAACCGAAGGGTGGAGCTCAGGGCCTCTGCCCTGACGTGTTaGGCCAAGGCCTGGCGCTCCAGCTCCAGAATCTTCTTGTGTAGC | + |
Preference number: 6 (lower is better) Translates to: WANRRVELRASALTC*AKAWRSSSRIFLCS Trigger: GCTACACAAGAAGATTCTGGAGCTGGAGCGCCAGGCCTTGGCCAAACACGTCAGGGCAGAGGCCCTGAGCTCCACCCTTCGGTTGGCCCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CCA 72 bp | CCTCCGGCTTCATCTTGTCCGTCAGCAGTAGGTTCTTaGCCCGAACGGCCTCGTCTTGGGCCAACCGAAGGG | + |
Preference number: 6 (lower is better) Translates to: PPASSCPSAVGS*PERPRLGPTEG Trigger: CCCTTCGGTTGGCCCAAGACGAGGCCGTTCGGGCCAAGAACCTACTGCTGACGGACAAGATGAAGCCGGAGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS GCA 72 bp | CTCAGACCATGTCGGGAGAGGCCAGCCTCCAGTTTTTaGTCCAACTCCTGCAACTCGGCCTCCTGTCTCCGG | + |
Preference number: 6 (lower is better) Translates to: LRPCRERPASSF*SNSCNSASCLR Trigger: CCGGAGACAGGAGGCCGAGTTGCAGGAGTTGGAGCAAAAACTGGAGGCTGGCCTCTCCCGACATGGTCTGAG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS GCA 72 bp | ATAGTGCACAACTCATCTGCTCGTCCTCGCAGCTCCTaGAAGCCCCTTGCGGACTGTGCCTGTTCCCGCTGC | + |
Preference number: 6 (lower is better) Translates to: IVHNSSARPRSS*KPLADCACSRC Trigger: GCAGCGGGAACAGGCACAGTCCGCAAGGGGCTTGCAGGAGCTGCGAGGACGAGCAGATGAGTTGTGCACTAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CCA 72 bp | CCCCCGCAGGTGGGTCCCCCGCTTCGTGGATCTCTTTaGATTGCCAGATTGTCTTCACCACCACGCTTGCCA | + |
Preference number: 6 (lower is better) Translates to: PPQVGPPLRGSL*IARLSSPPRLP Trigger: TGGCAAGCGTGGTGGTGAAGACAATCTGGCAATCCAAAGAGATCCACGAAGCGGGGGACCCACCTGCGGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CCA 72 bp | ACTCCGGCTTCATCTTGTCCGTCAGCAGTAGGTTCTTaGCCCGAACGGCCTCGTCTTGGGCCAACCGAAGGG | + |
Preference number: 6 (lower is better) Translates to: TPASSCPSAVGS*PERPRLGPTEG Trigger: CCCTTCGGTTGGCCCAAGACGAGGCCGTTCGGGCCAAGAACCTACTGCTGACGGACAAGATGAAGCCGGAGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS CAA 72 bp | ACCCCCGCAGGTGGGTCCCCCGCTTCGTGGATCTCTTaGGATTGCCAGATTGTCTTCACCACCACGCTTGCC | + |
Preference number: 6 (lower is better) Translates to: TPAGGSPASWIS*DCQIVFTTTLA Trigger: GGCAAGCGTGGTGGTGAAGACAATCTGGCAATCCAAAGAGATCCACGAAGCGGGGGACCCACCTGCGGGGGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CAA 72 bp | TTGAGCAAGGACACGTTGGTGCAGGCAGAGGACCGCTaGAGGTTCAGGCACCAGTGCATCGGCTCGTGGGAC | + |
Preference number: 6 (lower is better) Translates to: LSKDTLVQAEDR*RFRHQCIGSWD Trigger: GTCCCACGAGCCGATGCACTGGTGCCTGAACCTCAAGCGGTCCTCTGCCTGCACCAACGTGTCCTTGCTCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000207719.2 |
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CDS CAA 72 bp | GCTCAGACCATGTCGGGAGAGGCCAGCCTCCAGTTTTaGCTCCAACTCCTGCAACTCGGCCTCCTGTCTCCG | + |
Preference number: 6 (lower is better) Translates to: AQTMSGEASLQF*LQLLQLGLLSP Trigger: CGGAGACAGGAGGCCGAGTTGCAGGAGTTGGAGCAAAAACTGGAGGCTGGCCTCTCCCGACATGGTCTGAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CAA 72 bp | CACTCCGGCTTCATCTTGTCCGTCAGCAGTAGGTTCTaGGCCCGAACGGCCTCGTCTTGGGCCAACCGAAGG | + |
Preference number: 6 (lower is better) Translates to: HSGFILSVSSRF*ARTASSWANRR Trigger: CCTTCGGTTGGCCCAAGACGAGGCCGTTCGGGCCAAGAACCTACTGCTGACGGACAAGATGAAGCCGGAGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS CAA 72 bp | TCCTCCGGCTTCATCTTGTCCGTCAGCAGTAGGTTCTaGGCCCGAACGGCCTCGTCTTGGGCCAACCGAAGG | + |
Preference number: 6 (lower is better) Translates to: SSGFILSVSSRF*ARTASSWANRR Trigger: CCTTCGGTTGGCCCAAGACGAGGCCGTTCGGGCCAAGAACCTACTGCTGACGGACAAGATGAAGCCGGAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS CCA 72 bp | CGGCTTTCTACCCCCGCAGGTGGGTCCCCCGCTTCGTaGATCTCTTTGGATTGCCAGATTGTCTTCACCACC | + |
Preference number: 6 (lower is better) Translates to: RLSTPAGGSPAS*ISLDCQIVFTT Trigger: GGTGGTGAAGACAATCTGGCAATCCAAAGAGATCCACGAAGCGGGGGACCCACCTGCGGGGGTAGAAAGCCG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CAA 72 bp | CAAGACATGGTCAGCTCCCCTCCGGGAGTTCTGAAGTaGCCGTCCCAGCTCCTCCAGAATGGGTTTTACTGG | + |
Preference number: 6 (lower is better) Translates to: QDMVSSPPGVLK*PSQLLQNGFYW Trigger: CCAGTAAAACCCATTCTGGAGGAGCTGGGACGGCAACTTCAGAACTCCCGGAGGGGAGCTGACCATGTCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS CAA 72 bp | GTTTTGATTTCAGCGTCTTCCACTGAACGGGTCACCTaGCGGCAGTTCTCCTGGGTCAGGACATCAGGGCGG | + |
Preference number: 6 (lower is better) Translates to: VLISASSTERVT*RQFSWVRTSGR Trigger: CCGCCCTGATGTCCTGACCCAGGAGAACTGCCGCAAGGTGACCCGTTCAGTGGAAGACGCTGAAATCAAAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120929.9 |
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CDS TCA 72 bp | AAGTTCAAGACATGGTCAGCTCCCCTCCGGGAGTTCTaGAGTTGCCGTCCCAGCTCCTCCAGAATGGGTTTT | + |
Preference number: 6 (lower is better) Translates to: KFKTWSAPLREF*SCRPSSSRMGF Trigger: AAAACCCATTCTGGAGGAGCTGGGACGGCAACTTCAGAACTCCCGGAGGGGAGCTGACCATGTCTTGAACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000208475.2 |
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CDS CAA 90 bp | TCCTTCAAGCTGGTGATGGAGTCTTTGGCACGTACCAATCCACTGTaGACCCCACTCAGTAGTTCTGTGATGTCAGGGTCCTCTGGAGCC | + |
Preference number: 6 (lower is better) Translates to: SFKLVMESLARTNPL*TPLSSSVMSGSSGA Trigger: GGCTCCAGAGGACCCTGACATCACAGAACTACTGAGTGGGGTCAACAGTGGATTGGTACGTGCCAAAGACTCCATCACCAGCTTGAAGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000207719.2 |
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CDS TCA 72 bp | CTTCAGGACATTGGTTTTGATTTCAGCGTCTTCCACTaGACGGGTCACCTTGCGGCAGTTCTCCTGGGTCAG | + |
Preference number: 6 (lower is better) Translates to: LQDIGFDFSVFH*TGHLAAVLLGQ Trigger: CTGACCCAGGAGAACTGCCGCAAGGTGACCCGTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000120929.9 |
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CDS CAA 72 bp | CTGGTGATGGAGTCTTTGGCACGTACCAATCCACTGTaGACCCCACTCAGTAGTTCTGTGATGTCAGGGTCC | + |
Preference number: 6 (lower is better) Translates to: LVMESLARTNPL*TPLSSSVMSGS Trigger: GGACCCTGACATCACAGAACTACTGAGTGGGGTCAACAGTGGATTGGTACGTGCCAAAGACTCCATCACCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000207719.2 |
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CDS CAA 72 bp | CGCGTGGTCTTTTCCTTCAAGCTGGTGATGGAGTCTTaGGCACGTACCAATCCACTGTTGACCCCACTCAGT | + |
Preference number: 6 (lower is better) Translates to: RVVFSFKLVMES*ARTNPLLTPLS Trigger: ACTGAGTGGGGTCAACAGTGGATTGGTACGTGCCAAAGACTCCATCACCAGCTTGAAGGAAAAGACCACGCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 ENSMUST00000207719.2 |
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CDS CAA 90 bp | AGCTTCTCCTCCAGCAAGGCAGAGTTCTGCTTCAGGACATTGGTTTaGATTTCAGCGTCTTCCACTGAACGGGTCACCTTGCGGCAGTTC | + |
Preference number: 6 (lower is better) Translates to: SFSSSKAEFCFRTLV*ISASSTERVTLRQF Trigger: GAACTGCCGCAAGGTGACCCGTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGAACTCTGCCTTGCTGGAGGAGAAGCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS TCA 72 bp | CCAGCAAGGCAGAGTTCTGCTTCAGGACATTGGTTTTaGTTTCAGCGTCTTCCACTGAACGGGTCACCTTGC | + |
Preference number: 6 (lower is better) Translates to: PARQSSASGHWF*FQRLPLNGSPC Trigger: GCAAGGTGACCCGTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGAACTCTGCCTTGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS CAA 90 bp | TATCTTAGCTTCTCCTCCAGCAAGGCAGAGTTCTGCTTCAGGACATaGGTTTTGATTTCAGCGTCTTCCACTGAACGGGTCACCTTGCGG | + |
Preference number: 6 (lower is better) Translates to: YLSFSSSKAEFCFRT*VLISASSTERVTLR Trigger: CCGCAAGGTGACCCGTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGAACTCTGCCTTGCTGGAGGAGAAGCTAAGATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |
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CDS TCA 72 bp | CTTCAGGACATTGGTTTTGATTTCAGCGTCTTCCACTaGACGGGTCACCTTGCGGCAGTTCTCCTTCAACTG | + |
Preference number: 6 (lower is better) Translates to: LQDIGFDFSVFH*TGHLAAVLLQL Trigger: CAGTTGAAGGAGAACTGCCGCAAGGTGACCCGTTCAGTGGAAGACGCTGAAATCAAAACCAATGTCCTGAAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000080233.9 |
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CDS GCA 72 bp | AGGTATCTTAGCTTCTCCTCCAGCAAGGCAGAGTTCTaGTTCAGGACATTGGTTTTGATTTCAGCGTCTTCC | + |
Preference number: 6 (lower is better) Translates to: RYLSFSSSKAEF*FRTLVLISASS Trigger: GGAAGACGCTGAAATCAAAACCAATGTCCTGAAGCAGAACTCTGCCTTGCTGGAGGAGAAGCTAAGATACCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000080233.9 ENSMUST00000120929.9 |