RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSHZ3 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000021217

Ensembl transcript IDs: ENSMUST00000021641.8

Found 267 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATGCAAAAGTGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTaGGAAATGCCAGCACACCCAAGTCTCATGGAAAAAGTGTGCCTG +
Preference number: 1 (lower is better)
Translates to: MQKCFVVLRGLKMKG*EMPAHPSLMEKVCL
Trigger: CAGGCACACTTTTTCCATGAGACTTGGGTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCACTTTTGCAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR GCA 90 bp AGGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTaGCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACG +
Preference number: 1 (lower is better)
Translates to: RFSYGVSCQLFLQIN*QKWRQEWLGEPVTT
Trigger: CGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR CCA 90 bp TATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATaGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTT +
Preference number: 1 (lower is better)
Translates to: YGVSCQLFLQINCQK*RQEWLGEPVTTGYL
Trigger: AAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR GCA 90 bp ACAAAACAGGGCACAGAGTGTGTCACGGTGTCTGTGGTGTTTACATaGCAATATTTTATACATAGGTTCTCATATGGTGTCAGCTGTCAG +
Preference number: 1 (lower is better)
Translates to: TKQGTECVTVSVVFT*QYFIHRFSYGVSCQ
Trigger: CTGACAGCTGACACCATATGAGAACCTATGTATAAAATATTGGCATGTAAACACCACAGACACCGTGACACACTCTGTGCCCTGTTTTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR CCA 90 bp GGTGGGAAATGCCAGCACACCCAAGTCTCATGGAAAAAGTGTGCCTaGTTTCCTTATAAATGCTTAATTAAACCGTCTGTTAATGCATGC +
Preference number: 1 (lower is better)
Translates to: GGKCQHTQVSWKKCA*FPYKCLIKPSVNAC
Trigger: GCATGCATTAACAGACGGTTTAATTAAGCATTTATAAGGAAACCAGGCACACTTTTTCCATGAGACTTGGGTGTGCTGGCATTTCCCACC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR CCA 90 bp CATCGTCAACAACAAAACAGGGCACAGAGTGTGTCACGGTGTCTGTaGTGTTTACATGCCAATATTTTATACATAGGTTCTCATATGGTG +
Preference number: 1 (lower is better)
Translates to: HRQQQNRAQSVSRCL*CLHANILYIGSHMV
Trigger: CACCATATGAGAACCTATGTATAAAATATTGGCATGTAAACACCACAGACACCGTGACACACTCTGTGCCCTGTTTTGTTGTTGACGATG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR GCA 90 bp CACACCCAAGTCTCATGGAAAAAGTGTGCCTGGTTTCCTTATAAATaGTTAATTAAACCGTCTGTTAATGCATGCAGCTTGAAGCATCGA +
Preference number: 1 (lower is better)
Translates to: HTQVSWKKCAWFPYK*LIKPSVNACSLKHR
Trigger: TCGATGCTTCAAGCTGCATGCATTAACAGACGGTTTAATTAAGCATTTATAAGGAAACCAGGCACACTTTTTCCATGAGACTTGGGTGTG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR CCA 90 bp TTACCACGGGTTACCTTTCATAAGCCTAAAGATAAAACTGCAGTGTaGGATCTTGGGAGAATAATTAGGAGGAACAAAACAAAGTTACCG +
Preference number: 1 (lower is better)
Translates to: LPRVTFHKPKDKTAV*DLGRIIRRNKTKLP
Trigger: CGGTAACTTTGTTTTGTTCCTCCTAATTATTCTCCCAAGATCCCACACTGCAGTTTTATCTTTAGGCTTATGAAAGGTAACCCGTGGTAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR GCA 90 bp ATTTTATACATAGGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTaGAAATTAACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGC +
Preference number: 1 (lower is better)
Translates to: ILYIGSHMVSAVSYF*KLTARNGDKNGLES
Trigger: GCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACCTATGTATAAAAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR-3UTR TCA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACTTAATGCATGCAGCTTaGAGCATCGAGGGGATGCTC +
Preference number: 2 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYLMHAA*SIEGML
Trigger: GAGCATCCCCTCGATGCTTCAAGCTGCATGCATTAA...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR-3UTR GCA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACAGAGGGGCTTTAAGGTaGCTTCAGCATTTTCTCCTC +
Preference number: 2 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYRGALR*LQHFLL
Trigger: GAGGAGAAAATGCTGAAGGCACCTTAAAGCCCCTCT...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR-3UTR GCA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACCCGTCTGTTAATGCATaGAGCTTGAAGCATCGAGGG +
Preference number: 2 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHPSVNA*SLKHRG
Trigger: CCCTCGATGCTTCAAGCTGCATGCATTAACAGACGG...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR-3UTR CCA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACGATAAAACTGCAGTGTaGGATCTTGGGAGAATAATT +
Preference number: 2 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYDKTAV*DLGRII
Trigger: AATTATTCTCCCAAGATCCCACACTGCAGTTTTATC...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR-3UTR GCA 90 bp TCACATCATGGTGTGCCATCGTCAACAACAAAACAGGGCACAGAGTGTGTCACGAAATTAATGCAAAAGTaGTTCGTAGTACTCAGAGGG +
Preference number: 2 (lower is better)
Translates to: SHHGVPSSTTKQGTECVTKLMQK*FVVLRG
Trigger: CCCTCTGAGTACTACGAAGCACTTTTGCATTAATTT...CGTGACACACTCTGTGCCCTGTTTTGTTGTTGACGATGGCACACCATGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR-3UTR GCA 90 bp TCACATCATGGTGTGCCATCGTCAACAACAAAACAGGGCACAGAGTGTGTCACGGCTGTCAGTTATTTCTaGAAATTAACTGCCAGAAAT +
Preference number: 2 (lower is better)
Translates to: SHHGVPSSTTKQGTECVTAVSYF*KLTARN
Trigger: ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGC...CGTGACACACTCTGTGCCCTGTTTTGTTGTTGACGATGGCACACCATGATGTGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR CAA 90 bp AGTTATTTCTGCAAATTAACTGCCAGAAATGGAGACAAGAATGGCTaGGAGAGCCGGTTACCACGGGTTACCTTTCATAAGCCTAAAGAT +
Preference number: 2 (lower is better)
Translates to: SYFCKLTARNGDKNG*ESRLPRVTFHKPKD
Trigger: ATCTTTAGGCTTATGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTTAATTTGCAGAAATAACT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR-3UTR GCA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATCCCAGAACAATCCTCTaGAGTGAACATAAGAACGTG +
Preference number: 2 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNPRTIL*SEHKNV
Trigger: CACGTTCTTATGTTCACTGCAGAGGATTGTTCTGGG...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR-3UTR GCA 90 bp AGGGGATGCTCACAATTAAATCCCATTTACACAAAGTTCCAAACACTTAGCACTGAACATAAGAACGTGTaGCAAGAACAAGACAGAGAG +
Preference number: 2 (lower is better)
Translates to: RGCSQLNPIYTKFQTLSTEHKNV*QEQDRE
Trigger: CTCTCTGTCTTGTTCTTGGCACACGTTCTTATGTTC...AGTGCTAAGTGTTTGGAACTTTGTGTAAATGGGATTTAATTGTGAGCATCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR-3UTR GCA 90 bp GTGTCACGGTGTCTGTGGTGTTTACATGCCAATATTTTATACATAGGTTCTCATACAAACATCATACCTTaGTTTGAGATAATGCTTCTG +
Preference number: 2 (lower is better)
Translates to: VSRCLWCLHANILYIGSHTNIIP*FEIMLL
Trigger: CAGAAGCATTATCTCAAAGCAAGGTATGATGTTTGT...ATGAGAACCTATGTATAAAATATTGGCATGTAAACACCACAGACACCGTGACAC
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR-3UTR CCA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATTGGAAAAAGTGTGCCTaGTTTCCTTATAAATGCTTA +
Preference number: 2 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNWKKCA*FPYKCL
Trigger: TAAGCATTTATAAGGAAACCAGGCACACTTTTTCCA...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR-3UTR CAA 90 bp TCACATCATGGTGTGCCATCGTCAACAACAAAACAGGGCACAGAGTGTGTCACGGGAGACAAGAATGGCTaGGAGAGCCGGTTACCACGG +
Preference number: 3 (lower is better)
Translates to: SHHGVPSSTTKQGTECVTGDKNG*ESRLPR
Trigger: CCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCC...CGTGACACACTCTGTGCCCTGTTTTGTTGTTGACGATGGCACACCATGATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR GCA 72 bp CGTGTGCCAAGAACAAGACAGAGAGGGGCTTTAAGGTaGCTTCAGCATTTTCTCCTCCAGTCATTTCCGCTC +
Preference number: 3 (lower is better)
Translates to: RVPRTRQRGALR*LQHFLLQSFPL
Trigger: GAGCGGAAATGACTGGAGGAGAAAATGCTGAAGGCACCTTAAAGCCCCTCTCTGTCTTGTTCTTGGCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR-3UTR CAA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACGTTAATGCATGCAGCTaGAAGCATCGAGGGGATGCT +
Preference number: 3 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHVNACS*KHRGDA
Trigger: AGCATCCCCTCGATGCTTCAAGCTGCATGCATTAAC...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR GCA 72 bp TATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTaGCAGAAATGGAGACAAGAATGGCTTGGAGAGCCG +
Preference number: 3 (lower is better)
Translates to: YGVSCQLFLQIN*QKWRQEWLGEP
Trigger: CGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR CCA 72 bp CAACAAAACAGGGCACAGAGTGTGTCACGGTGTCTGTaGTGTTTACATGCCAATATTTTATACATAGGTTCT +
Preference number: 3 (lower is better)
Translates to: QQNRAQSVSRCL*CLHANILYIGS
Trigger: AGAACCTATGTATAAAATATTGGCATGTAAACACCACAGACACCGTGACACACTCTGTGCCCTGTTTTGTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
3UTR GCA 72 bp GTCTCATGGAAAAAGTGTGCCTGGTTTCCTTATAAATaGTTAATTAAACCGTCTGTTAATGCATGCAGCTTG +
Preference number: 3 (lower is better)
Translates to: VSWKKCAWFPYK*LIKPSVNACSL
Trigger: CAAGCTGCATGCATTAACAGACGGTTTAATTAAGCATTTATAAGGAAACCAGGCACACTTTTTCCATGAGAC
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACTGGCTGTGCTGCCGCTaGGACCTCCGCTCAGGGGCT +
Preference number: 4 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHWLCCR*DLRSGA
Trigger: AGCCCCTGAGCGGAGGTCTCAGCGGCAGCACAGCCA...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACTCCGCCTTCTTGGCCTaGAGGGGTGGTGGGGTGGCC +
Preference number: 4 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHSAFLA*RGGGVA
Trigger: GGCCACCCCACCACCCCTTCAGGCCAAGAAGGCGGA...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCACAGGCAGCGAGGGCTTaGCGGCCTTGCCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSQAARA*RPCPGG
Trigger: TCCACCTGGGCAAGGCCGCCAAGCCCTCGCTGCCTG...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACGCCATGGCACTCTGGTaGCAGTCAAAGCTCCCGCTG +
Preference number: 4 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYAMALW*QSKLPL
Trigger: CAGCGGGAGCTTTGACTGGCACCAGAGTGCCATGGC...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp TCACATCATGGTGTGCCATCGTCAACAACAAAACAGGGCACAGAGTGTGTCACGCGGCCTTTCCTCTTCTaGGCCGGAGTCGACTCCTCG +
Preference number: 4 (lower is better)
Translates to: SHHGVPSSTTKQGTECVTRPFLF*AGVDSS
Trigger: CGAGGAGTCGACTCCGGCGCAGAAGAGGAAAGGCCG...CGTGACACACTCTGTGCCCTGTTTTGTTGTTGACGATGGCACACCATGATGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACTCCTCCAGGGGCACCTaGACCTCCTTGGTCTCCTCC +
Preference number: 4 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHSSRGT*TSLVSS
Trigger: GGAGGAGACCAAGGAGGTCCAGGTGCCCCTGGAGGA...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp TCACATCATGGTGTGCCATCGTCAACAACAAAACAGGGCACAGAGTGTGTCACGCGGTTCTGGGACACCTaGTGCAGGGTCTTCGCCATG +
Preference number: 4 (lower is better)
Translates to: SHHGVPSSTTKQGTECVTRFWDT*CRVFAM
Trigger: CATGGCGAAGACCCTGCAGCAGGTGTCCCAGAACCG...CGTGACACACTCTGTGCCCTGTTTTGTTGTTGACGATGGCACACCATGATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp TCACATCATGGTGTGCCATCGTCAACAACAAAACAGGGCACAGAGTGTGTCACGTGGGTTTCAGGGGCGTaGTCTTCCCCGAGGAACCCA +
Preference number: 4 (lower is better)
Translates to: SHHGVPSSTTKQGTECVTWVSGA*SSPRNP
Trigger: TGGGTTCCTCGGGGAAGAGCACGCCCCTGAAACCCA...CGTGACACACTCTGTGCCCTGTTTTGTTGTTGACGATGGCACACCATGATGTGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACTGGGGTGGCCACAGCTaGCTTCTCGGCCAGACTGTT +
Preference number: 4 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHWGGHS*LLGQTV
Trigger: AACAGTCTGGCCGAGAAGGCAGCTGTGGCCACCCCA...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACTTGCCGTTGTCACCGTaGATGAGGAAGTTGCCGGGG +
Preference number: 4 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYLPLSP*MRKLPG
Trigger: CCCCGGCAACTTCCTCATCCACGGTGACAACGGCAA...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACCGGCCTCTTCCAGGGTaGCCCCGTCAATGTCAGACT +
Preference number: 4 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHRPLPG*PRQCQT
Trigger: AGTCTGACATTGACGGGGCCACCCTGGAAGAGGCCG...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACATGTGCATGCGCTCCTaGGGGCTCAGATCGGACATG +
Preference number: 4 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYMCMRS*GLRSDM
Trigger: CATGTCCGATCTGAGCCCCCAGGAGCGCATGCACAT...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCAACTTGCTGGCCCCGGTaGAAATGGAGCCGTACAGCT +
Preference number: 4 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSTCWPR*KWSRTA
Trigger: AGCTGTACGGCTCCATTTTCACCGGGGCCAGCAAGT...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTGGGGCTATTCTCCTaGCTTTTGAAGCTGCCGTCG +
Preference number: 4 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYLGLFS*LLKLPS
Trigger: CGACGGCAGCTTCAAAAGTCAGGAGAATAGCCCCAG...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCACCAGGTGGATGTTCATaGCCGACTGCAGGGCACTCA +
Preference number: 4 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSPGGCS*PTAGHS
Trigger: TGAGTGCCCTGCAGTCGGTCATGAACATCCACCTGG...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACGATGTACTTCCCTTCTaGAGTCTGCCGCAGGCTAGC +
Preference number: 4 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYDVLPF*SLPQAS
Trigger: GCTAGCCTGCGGCAGACTTCAGAAGGGAAGTACATC...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp TCACATCATGGTGTGCCATCGTCAACAACAAAACAGGGCACAGAGTGTGTCACGTTCTGGGACACCTGCTaGAGGGTCTTCGCCATGGCA +
Preference number: 4 (lower is better)
Translates to: SHHGVPSSTTKQGTECVTFWDTC*RVFAMA
Trigger: TGCCATGGCGAAGACCCTGCAGCAGGTGTCCCAGAA...CGTGACACACTCTGTGCCCTGTTTTGTTGTTGACGATGGCACACCATGATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCACGTGAATGTGGTGGCTaGCAGTGGCACAGACTGCAC +
Preference number: 4 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSRECGG*QWHRLH
Trigger: GTGCAGTCTGTGCCACTGGCAGCCACCACATTCACG...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACGCTTGGACCAGCGCTTaGGGTTGTTGTTGTCGGTCT +
Preference number: 4 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYAWTSA*GCCCRS
Trigger: AGACCGACAACAACAACCCCAAGCGCTGGTCCAAGC...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACTGTGGTGGCTGCCAGTaGCACAGACTGCACCTTCTC +
Preference number: 4 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHCGGCQ*HRLHLL
Trigger: GAGAAGGTGCAGTCTGTGCCACTGGCAGCCACCACA...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp AACACTGTACAGTTAGACCGAACAGTCCAGCCCAGAACAATCCTCTGCAGTGAAACACATGTACTTGGCTaGGGGCTCTCCATCTGCCGC +
Preference number: 4 (lower is better)
Translates to: NTVQLDRTVQPRTILCSETHVLG*GLSICR
Trigger: GCGGCAGATGGAGAGCCCTCAGCCAAGTACATGTGT...TTCACTGCAGAGGATTGTTCTGGGCTGGACTGTTCGGTCTAACTGTACAGTGTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACTGTCCACTTCCTTTTTaGTCTCCACCGCCAGCTTCG +
Preference number: 4 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYCPLPF*SPPPAS
Trigger: CGAAGCTGGCGGTGGAGATCAAAAAGGAAGTGGACA...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACGCGGCGAGTTTGACATaGATGATACGACGGCAGATG +
Preference number: 4 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYAASLT*MIRRQM
Trigger: CATCTGCCGTCGTATCATTCATGTCAAACTCGCCGC...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACGTGACTCTAGGTGGCTaGTGTACGTGGAAGGAGTCC +
Preference number: 4 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHVTLGG*CTWKES
Trigger: GGACTCCTTCCACGTACATCAGCCACCTAGAGTCAC...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp TCACATCATGGTGTGCCATCGTCAACAACAAAACAGGGCACAGAGTGTGTCACGTGCTGCTGCTGCTACTaGTGCCACCATTGTTCTCGG +
Preference number: 4 (lower is better)
Translates to: SHHGVPSSTTKQGTECVTCCCCY*CHHCSR
Trigger: CCGAGAACAATGGTGGCAGCAGTAGCAGCAGCAGCA...CGTGACACACTCTGTGCCCTGTTTTGTTGTTGACGATGGCACACCATGATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp AACACTGTACAGTTAGACCGAACAGTCCAGCCCAGAACAATCCTCTGCAGTGAAACCTGGAGATGTGCATaGGCTCCTGGGGGCTCAGAT +
Preference number: 4 (lower is better)
Translates to: NTVQLDRTVQPRTILCSETWRCA*APGGSD
Trigger: ATCTGAGCCCCCAGGAGCGCATGCACATCTCCAGGT...TTCACTGCAGAGGATTGTTCTGGGCTGGACTGTTCGGTCTAACTGTACAGTGTT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp AACACTGTACAGTTAGACCGAACAGTCCAGCCCAGAACAATCCTCTGCAGTGAATTCTCGGAGGAGGGCTaGTGCAGGTTCAGGTTGAGG +
Preference number: 4 (lower is better)
Translates to: NTVQLDRTVQPRTILCSEFSEEG*CRFRLR
Trigger: CCTCAACCTGAACCTGCACCAGCCCTCCTCCGAGAA...TTCACTGCAGAGGATTGTTCTGGGCTGGACTGTTCGGTCTAACTGTACAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCACAGACAGGGTGGCTTTaGGGGTTCCACCTGTGGAAT +
Preference number: 4 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSQTGWL*GFHLWN
Trigger: ATTCCACAGGTGGAACCCCCAAAGCCACCCTGTCTG...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCACGCTGTTGCCAAACATaGGTTTCAGGGGCGTGCTCT +
Preference number: 4 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSRCCQT*VSGACS
Trigger: AGAGCACGCCCCTGAAACCCATGTTTGGCAACAGCG...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACACGTGGAAGGAGTCCTaGTTTGTGACGCACAGTCGT +
Preference number: 4 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHTWKES*FVTHSR
Trigger: ACGACTGTGCGTCACAAATCAGGACTCCTTCCACGT...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp AACACTGTACAGTTAGACCGAACAGTCCAGCCCAGAACAATCCTCTGCAGTGAAGAGGTGGTCTTCCGGTaGTTTCCCGTGGGTTTTGCT +
Preference number: 4 (lower is better)
Translates to: NTVQLDRTVQPRTILCSEEVVFR*FPVGFA
Trigger: AGCAAAACCCACGGGAAATCACCGGAAGACCACCTC...TTCACTGCAGAGGATTGTTCTGGGCTGGACTGTTCGGTCTAACTGTACAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp AGGGGATGCTCACAATTAAATCCCATTTACACAAAGTTCCAAACACTTAGCACTGGAAACATAGGCTGCTaGGCGCCGGGGCGCCTGCTG +
Preference number: 4 (lower is better)
Translates to: RGCSQLNPIYTKFQTLSTGNIGC*APGRLL
Trigger: CAGCAGGCGCCCCGGCGCGCAGCAGCCTATGTTTCC...AGTGCTAAGTGTTTGGAACTTTGTGTAAATGGGATTTAATTGTGAGCATCCCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACTACACGGCCTTCATCTaGTCCAGGCTATCAGACACG +
Preference number: 4 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHYTAFI*SRLSDT
Trigger: CGTGTCTGATAGCCTGGAGCAGATGAAGGCCGTGTA...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCATTCCCTTCTGAAGTCTaGCGCAGGCTAGCTGCAAAC +
Preference number: 4 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSFPSEV*RRLAAN
Trigger: GTTTGCAGCTAGCCTGCGGCAGACTTCAGAAGGGAA...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp AACACTGTACAGTTAGACCGAACAGTCCAGCCCAGAACAATCCTCTGCAGTGAATCGCTGTCCATTTCATaGCTGGAGAACTCAGCGGCC +
Preference number: 4 (lower is better)
Translates to: NTVQLDRTVQPRTILCSESLSIS*LENSAA
Trigger: GGCCGCTGAGTTCTCCAGCCATGAAATGGACAGCGA...TTCACTGCAGAGGATTGTTCTGGGCTGGACTGTTCGGTCTAACTGTACAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp AAATGCTTAATTAAACCGTCTGTTAATGCATGCAGCTTGAAGCATCGAGGGGATAGGCAGCGTGGATGCTaGGATAGCCGCCCCAGCTGG +
Preference number: 4 (lower is better)
Translates to: KCLIKPSVNACSLKHRGDRQRGC*DSRPSW
Trigger: CCAGCTGGGGCGGCTATCCCAGCATCCACGCTGCCT...ATCCCCTCGATGCTTCAAGCTGCATGCATTAACAGACGGTTTAATTAAGCATTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp TCACATCATGGTGTGCCATCGTCAACAACAAAACAGGGCACAGAGTGTGTCACGCGTGAAAGTTTGTCTTaGGCATGGGAGAGGTCTGGC +
Preference number: 4 (lower is better)
Translates to: SHHGVPSSTTKQGTECVTRESLS*AWERSG
Trigger: GCCAGACCTCTCCCATGCCCAAGACAAACTTTCACG...CGTGACACACTCTGTGCCCTGTTTTGTTGTTGACGATGGCACACCATGATGTGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCAAGGAGTGGAGGATTTTaGCGTGTGGCTCTCTGTCAA +
Preference number: 4 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSRSGGF*RVALCQ
Trigger: TTGACAGAGAGCCACACGTCAAAATCCTCCACTCCT...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp AACACTGTACAGTTAGACCGAACAGTCCAGCCCAGAACAATCCTCTGCAGTGAAGCTTCTCTCTCTCCTTaGGTTTCTCATCCGGGACTG +
Preference number: 4 (lower is better)
Translates to: NTVQLDRTVQPRTILCSEASLSP*VSHPGL
Trigger: CAGTCCCGGATGAGAAACCCAAGGAGAGAGAGAAGC...TTCACTGCAGAGGATTGTTCTGGGCTGGACTGTTCGGTCTAACTGTACAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp AACACTGTACAGTTAGACCGAACAGTCCAGCCCAGAACAATCCTCTGCAGTGAATCTCCTCCTCTTCACTaGGCTTCTCTCTCTCCTTGG +
Preference number: 4 (lower is better)
Translates to: NTVQLDRTVQPRTILCSESPPLH*ASLSPW
Trigger: CCAAGGAGAGAGAGAAGCCCAGTGAAGAGGAGGAGA...TTCACTGCAGAGGATTGTTCTGGGCTGGACTGTTCGGTCTAACTGTACAGTGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACAAAAGGCTGTTCTGGTaGGTGGTCCGTGATAATGGC +
Preference number: 4 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHKRLFW*VVRDNG
Trigger: GCCATTATCACGGACCACCCACCAGAACAGCCTTTT...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp AGGGGATGCTCACAATTAAATCCCATTTACACAAAGTTCCAAACACTTAGCACTGGCCTGAAGGGGTGGTaGGGTGGCCACAGCTGCCTT +
Preference number: 4 (lower is better)
Translates to: RGCSQLNPIYTKFQTLSTGLKGW*GGHSCL
Trigger: AAGGCAGCTGTGGCCACCCCACCACCCCTTCAGGCC...AGTGCTAAGTGTTTGGAACTTTGTGTAAATGGGATTTAATTGTGAGCATCCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCAACACGATTTCGCTGTTaGCAAACATGGGTTTCAGGG +
Preference number: 4 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSTRFRC*QTWVSG
Trigger: CCCTGAAACCCATGTTTGGCAACAGCGAAATCGTGT...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp AAATGCTTAATTAAACCGTCTGTTAATGCATGCAGCTTGAAGCATCGAGGGGATGTGAACCTGGAGATGTaGATGCGCTCCTGGGGGCTC +
Preference number: 4 (lower is better)
Translates to: KCLIKPSVNACSLKHRGDVNLEM*MRSWGL
Trigger: GAGCCCCCAGGAGCGCATGCACATCTCCAGGTTCAC...ATCCCCTCGATGCTTCAAGCTGCATGCATTAACAGACGGTTTAATTAAGCATTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACGCCGTACCGATTATTTaGCGTGATGTAAGGGTTGGA +
Preference number: 4 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHAVPII*RDVRVG
Trigger: TCCAACCCTTACATCACGCCAAATAATCGGTACGGC...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp AAATGCTTAATTAAACCGTCTGTTAATGCATGCAGCTTGAAGCATCGAGGGGATAGTGCCATGCATAGCTaGCCCCGTTCTGGTGGCCGT +
Preference number: 4 (lower is better)
Translates to: KCLIKPSVNACSLKHRGDSAMHS*PRSGGR
Trigger: ACGGCCACCAGAACGGGGCCAGCTATGCATGGCACT...ATCCCCTCGATGCTTCAAGCTGCATGCATTAACAGACGGTTTAATTAAGCATTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp GTGTCACGGTGTCTGTGGTGTTTACATGCCAATATTTTATACATAGGTTCTCATGATGCTCCGCCTTCTTaGCCTGAAGGGGTGGTGGGG +
Preference number: 4 (lower is better)
Translates to: VSRCLWCLHANILYIGSHDAPPS*PEGVVG
Trigger: CCCCACCACCCCTTCAGGCCAAGAAGGCGGAGCATC...ATGAGAACCTATGTATAAAATATTGGCATGTAAACACCACAGACACCGTGACAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATGAACTCAGCGGCCGGTaGGTTCTGGTAGCTAGGGCA +
Preference number: 4 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNELSGR*VLVARA
Trigger: TGCCCTAGCTACCAGAACTCACCGGCCGCTGAGTTC...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACTGTTCTCAAGGGATTTaGGGATATCTAGTCCACCTT +
Preference number: 4 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYCSQGI*GYLVHL
Trigger: AAGGTGGACTAGATATCCTCAAATCCCTTGAGAACA...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCACATATCGGATATATCTaGCAAGGCATTCTCACGCAG +
Preference number: 4 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSHIGYI*QGILTQ
Trigger: CTGCGTGAGAATGCCTTGTCAGATATATCCGATATG...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp AAATGCTTAATTAAACCGTCTGTTAATGCATGCAGCTTGAAGCATCGAGGGGATAGCCGTACAGCTTGCTaGTCTGGCGGTACAGCTGCA +
Preference number: 4 (lower is better)
Translates to: KCLIKPSVNACSLKHRGDSRTAC*SGGTAA
Trigger: TGCAGCTGTACCGCCAGAGCAGCAAGCTGTACGGCT...ATCCCCTCGATGCTTCAAGCTGCATGCATTAACAGACGGTTTAATTAAGCATTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp CCTAAAGATAAAACTGCAGTGTGGGATCTTGGGAGAATAATTAGGAGGAACAAAGGCCTCGAAGTGCCATaGATAGCTGGCCCCGTTCTG +
Preference number: 4 (lower is better)
Translates to: PKDKTAVWDLGRIIRRNKGLEVP*IAGPVL
Trigger: CAGAACGGGGCCAGCTATGCATGGCACTTCGAGGCC...TTTGTTCCTCCTAATTATTCTCCCAAGATCCCACACTGCAGTTTTATCTTTAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATGGCAGCATTCGGTTCTaGGACACCTGCTGCAGGGTC +
Preference number: 4 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNGSIRF*DTCCRV
Trigger: GACCCTGCAGCAGGTGTCCCAGAACCGAATGCTGCC...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp GTGTCACGGTGTCTGTGGTGTTTACATGCCAATATTTTATACATAGGTTCTCATGAGAGGTCTGGCTGCTaGGTGGAGAGACCAGGGTCT +
Preference number: 4 (lower is better)
Translates to: VSRCLWCLHANILYIGSHERSGC*VERPGS
Trigger: AGACCCTGGTCTCTCCACCCAGCAGCCAGACCTCTC...ATGAGAACCTATGTATAAAATATTGGCATGTAAACACCACAGACACCGTGACAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCATCTCCTCCTCATTCTTaGTGGAACTGCTTTCAAAGT +
Preference number: 4 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSSPPHS*WNCFQS
Trigger: ACTTTGAAAGCAGTTCCATCAAGAATGAGGAGGAGA...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp AACACTGTACAGTTAGACCGAACAGTCCAGCCCAGAACAATCCTCTGCAGTGAAACCGATTATTTGGCGTaGTGTAAGGGTTGGAGTTCT +
Preference number: 4 (lower is better)
Translates to: NTVQLDRTVQPRTILCSETDYLA*CKGWSS
Trigger: AGAACTCCAACCCTTACATCACGCCAAATAATCGGT...TTCACTGCAGAGGATTGTTCTGGGCTGGACTGTTCGGTCTAACTGTACAGTGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp AGGGGATGCTCACAATTAAATCCCATTTACACAAAGTTCCAAACACTTAGCACTCGTTGTCACCGTGGATaGGGAAGTTGCCGGGGATGT +
Preference number: 4 (lower is better)
Translates to: RGCSQLNPIYTKFQTLSTRCHRG*GSCRGC
Trigger: ACATCCCCGGCAACTTCCTCATCCACGGTGACAACG...AGTGCTAAGTGTTTGGAACTTTGTGTAAATGGGATTTAATTGTGAGCATCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp AGGGGATGCTCACAATTAAATCCCATTTACACAAAGTTCCAAACACTTAGCACTAGTCAAAGCTCCCGCTaGCACAGCTGCTGCTGCTAC +
Preference number: 4 (lower is better)
Translates to: RGCSQLNPIYTKFQTLSTSQSSR*HSCCCY
Trigger: GTAGCAGCAGCAGCTGTGGCAGCGGGAGCTTTGACT...AGTGCTAAGTGTTTGGAACTTTGTGTAAATGGGATTTAATTGTGAGCATCCCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp CAACAGCTGATTATATGCACCTCTCTATTAAACACTGTACAGTTAGACCGAACATTCGCCATGGCACTCTaGTGCCAGTCAAAGCTCCCG +
Preference number: 4 (lower is better)
Translates to: QQLIICTSLLNTVQLDRTFAMAL*CQSKLP
Trigger: CGGGAGCTTTGACTGGCACCAGAGTGCCATGGCGAA...TGTTCGGTCTAACTGTACAGTGTTTAATAGAGAGGTGCATATAATCAGCTGTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp CCTAAAGATAAAACTGCAGTGTGGGATCTTGGGAGAATAATTAGGAGGAACAAAACCGTTTGCGAGGCTTaGACCAGCGCTTGGGGTTGT +
Preference number: 4 (lower is better)
Translates to: PKDKTAVWDLGRIIRRNKTVCEA*TSAWGC
Trigger: ACAACCCCAAGCGCTGGTCCAAGCCTCGCAAACGGT...TTTGTTCCTCCTAATTATTCTCCCAAGATCCCACACTGCAGTTTTATCTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp TCACATCATGGTGTGCCATCGTCAACAACAAAACAGGGCACAGAGTGTGTCACGTTAGTTTTGATCATATaGACGCTCAGGTCTTGGAGG +
Preference number: 4 (lower is better)
Translates to: SHHGVPSSTTKQGTECVTLVLII*TLRSWR
Trigger: CCTCCAAGACCTGAGCGTCCATATGATCAAAACTAA...CGTGACACACTCTGTGCCCTGTTTTGTTGTTGACGATGGCACACCATGATGTGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp AGGGGATGCTCACAATTAAATCCCATTTACACAAAGTTCCAAACACTTAGCACTTGGCATCAGACAGGGTaGCTTTGGGGGTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: RGCSQLNPIYTKFQTLSTWHQTG*LWGFHL
Trigger: CAGGTGGAACCCCCAAAGCCACCCTGTCTGATGCCA...AGTGCTAAGTGTTTGGAACTTTGTGTAAATGGGATTTAATTGTGAGCATCCCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATGGTCACTCGTCTCACTaGTGTGAGACTCGCTGTCCA +
Preference number: 4 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNGHSSH*CETRCP
Trigger: TGGACAGCGAGTCTCACATCAGTGAGACGAGTGACC...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp CCTAAAGATAAAACTGCAGTGTGGGATCTTGGGAGAATAATTAGGAGGAACAAACCATCATGTGAGCTGTaGGCTCCTGGAGCGTGTCAT +
Preference number: 4 (lower is better)
Translates to: PKDKTAVWDLGRIIRRNKPSCEL*APGACH
Trigger: ATGACACGCTCCAGGAGCTCACAGCTCACATGATGG...TTTGTTCCTCCTAATTATTCTCCCAAGATCCCACACTGCAGTTTTATCTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp AGGGGATGCTCACAATTAAATCCCATTTACACAAAGTTCCAAACACTTAGCACTCTGGGAGTGCCATTCTaGGCCTTGTTGATGGCAGAC +
Preference number: 4 (lower is better)
Translates to: RGCSQLNPIYTKFQTLSTLGVPF*ALLMAD
Trigger: GTCTGCCATCAACAAGGCTCAGAATGGCACTCCCAG...AGTGCTAAGTGTTTGGAACTTTGTGTAAATGGGATTTAATTGTGAGCATCCCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp CCTAAAGATAAAACTGCAGTGTGGGATCTTGGGAGAATAATTAGGAGGAACAAATCATGGAGAGACCGGTaGACCTGGAGATGTGCATGC +
Preference number: 4 (lower is better)
Translates to: PKDKTAVWDLGRIIRRNKSWRDR*TWRCAC
Trigger: GCATGCACATCTCCAGGTTCACCGGTCTCTCCATGA...TTTGTTCCTCCTAATTATTCTCCCAAGATCCCACACTGCAGTTTTATCTTTAGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATTGCTGCTGCTACTGCTaGCACCATTGTTCTCGGAGG +
Preference number: 4 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNCCCYC*HHCSRR
Trigger: CCTCCGAGAACAATGGTGGCAGCAGTAGCAGCAGCA...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp CAACAGCTGATTATATGCACCTCTCTATTAAACACTGTACAGTTAGACCGAACACCAACAAAGACCGTTTaGGAGGCTTGGACCAGCGCT +
Preference number: 4 (lower is better)
Translates to: QQLIICTSLLNTVQLDRTPTKTV*EAWTSA
Trigger: AGCGCTGGTCCAAGCCTCGCAAACGGTCTTTGTTGG...TGTTCGGTCTAACTGTACAGTGTTTAATAGAGAGGTGCATATAATCAGCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp GTGTCACGGTGTCTGTGGTGTTTACATGCCAATATTTTATACATAGGTTCTCATGCTTCACCAGCTCCTTaGCATTCTCTACGGGCTCTG +
Preference number: 4 (lower is better)
Translates to: VSRCLWCLHANILYIGSHASPAP*HSLRAL
Trigger: CAGAGCCCGTAGAGAATGGCAAGGAGCTGGTGAAGC...ATGAGAACCTATGTATAAAATATTGGCATGTAAACACCACAGACACCGTGACAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp CAACAGCTGATTATATGCACCTCTCTATTAAACACTGTACAGTTAGACCGAACAATGTTCATGACCGACTaGAGGGCACTCAGGGGGTTC +
Preference number: 4 (lower is better)
Translates to: QQLIICTSLLNTVQLDRTMFMTD*RALRGF
Trigger: GAACCCCCTGAGTGCCCTGCAGTCGGTCATGAACAT...TGTTCGGTCTAACTGTACAGTGTTTAATAGAGAGGTGCATATAATCAGCTGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATAGGCTAGCTGCAAACTaGGCCTGCAGGATTAGCAGG +
Preference number: 4 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNRLAAN*ACRISR
Trigger: CCTGCTAATCCTGCAGGCGCAGTTTGCAGCTAGCCT...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp CAACAGCTGATTATATGCACCTCTCTATTAAACACTGTACAGTTAGACCGAACATGTCCATTTCATGGCTaGAGAACTCAGCGGCCGGTG +
Preference number: 4 (lower is better)
Translates to: QQLIICTSLLNTVQLDRTCPFHG*RTQRPV
Trigger: CACCGGCCGCTGAGTTCTCCAGCCATGAAATGGACA...TGTTCGGTCTAACTGTACAGTGTTTAATAGAGAGGTGCATATAATCAGCTGTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCATGGACCAATAGGAATTaGACAGGAAGTTGTTGTACA +
Preference number: 4 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSWTNRN*TGSCCT
Trigger: TGTACAACAACTTCCTGTCCAATTCCTATTGGTCCA...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCATTTCAGACGGCGACTTaGTTTGTGCTATTTGATTGT +
Preference number: 4 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSFQTAT*FVLFDC
Trigger: ACAATCAAATAGCACAAACCAAGTCGCCGTCTGAAA...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp AAATGCTTAATTAAACCGTCTGTTAATGCATGCAGCTTGAAGCATCGAGGGGATGGTGCAGGTTCAGGTTaGGGTTGGACCAATAGGAAT +
Preference number: 4 (lower is better)
Translates to: KCLIKPSVNACSLKHRGDGAGSG*GWTNRN
Trigger: ATTCCTATTGGTCCAACCTCAACCTGAACCTGCACC...ATCCCCTCGATGCTTCAAGCTGCATGCATTAACAGACGGTTTAATTAAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp CAACAGCTGATTATATGCACCTCTCTATTAAACACTGTACAGTTAGACCGAACACTGAGGATTCCAGTTTaGCTGGCGGCCTTTCCTCTT +
Preference number: 4 (lower is better)
Translates to: QQLIICTSLLNTVQLDRTLRIPV*LAAFPL
Trigger: AAGAGGAAAGGCCGCCAGTCAAACTGGAATCCTCAG...TGTTCGGTCTAACTGTACAGTGTTTAATAGAGAGGTGCATATAATCAGCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp GTGTCACGGTGTCTGTGGTGTTTACATGCCAATATTTTATACATAGGTTCTCATCTCGTCTCACTGATGTaGGACTCGCTGTCCATTTCA +
Preference number: 4 (lower is better)
Translates to: VSRCLWCLHANILYIGSHLVSLM*DSLSIS
Trigger: TGAAATGGACAGCGAGTCTCACATCAGTGAGACGAG...ATGAGAACCTATGTATAAAATATTGGCATGTAAACACCACAGACACCGTGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp GTGTCACGGTGTCTGTGGTGTTTACATGCCAATATTTTATACATAGGTTCTCATATGCATTTGAGGATCTaGGACTTTCGGGCCTCGAAG +
Preference number: 4 (lower is better)
Translates to: VSRCLWCLHANILYIGSHMHLRI*DFRASK
Trigger: CTTCGAGGCCCGAAAGTCTCAGATCCTCAAATGCAT...ATGAGAACCTATGTATAAAATATTGGCATGTAAACACCACAGACACCGTGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp GTGTCACGGTGTCTGTGGTGTTTACATGCCAATATTTTATACATAGGTTCTCATAGTTCCTCCATGGCGTaGAAGTTTGTCTTGGGCATG +
Preference number: 4 (lower is better)
Translates to: VSRCLWCLHANILYIGSHSSSMA*KFVLGM
Trigger: CATGCCCAAGACAAACTTTCACGCCATGGAGGAACT...ATGAGAACCTATGTATAAAATATTGGCATGTAAACACCACAGACACCGTGACAC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp CCTAAAGATAAAACTGCAGTGTGGGATCTTGGGAGAATAATTAGGAGGAACAAATGGGCTGGTCATTGTTaGCGTGGTAGAAATAGCGGT +
Preference number: 4 (lower is better)
Translates to: PKDKTAVWDLGRIIRRNKWAGHC*RGRNSG
Trigger: ACCGCTATTTCTACCACGTCAACAATGACCAGCCCA...TTTGTTCCTCCTAATTATTCTCCCAAGATCCCACACTGCAGTTTTATCTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp CCTAAAGATAAAACTGCAGTGTGGGATCTTGGGAGAATAATTAGGAGGAACAAAAGGATTAGCAGGTGCTaGGGATTCCAGTTTGACTGG +
Preference number: 4 (lower is better)
Translates to: PKDKTAVWDLGRIIRRNKRISRC*GFQFDW
Trigger: CCAGTCAAACTGGAATCCTCAGCACCTGCTAATCCT...TTTGTTCCTCCTAATTATTCTCCCAAGATCCCACACTGCAGTTTTATCTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATGGCTCAGATCGGACATaGTGTACTTCCCTTCTGAAG +
Preference number: 4 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNGSDRT*CTSLLK
Trigger: CTTCAGAAGGGAAGTACATCATGTCCGATCTGAGCC...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp CCTAAAGATAAAACTGCAGTGTGGGATCTTGGGAGAATAATTAGGAGGAACAAATGGGTGGCGAGAGCTTaGCTTCTGGCTCTTTCATTT +
Preference number: 4 (lower is better)
Translates to: PKDKTAVWDLGRIIRRNKWVARA*LLALSF
Trigger: AAATGAAAGAGCCAGAAGGCAAGCTCTCGCCACCCA...TTTGTTCCTCCTAATTATTCTCCCAAGATCCCACACTGCAGTTTTATCTTTAGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp AAATGCTTAATTAAACCGTCTGTTAATGCATGCAGCTTGAAGCATCGAGGGGATCGAGAGCTTGCCTTCTaGCTCTTTCATTTTCTCCTC +
Preference number: 4 (lower is better)
Translates to: KCLIKPSVNACSLKHRGDRELAF*LFHFLL
Trigger: GAGGAGAAAATGAAAGAGCCAGAAGGCAAGCTCTCG...ATCCCCTCGATGCTTCAAGCTGCATGCATTAACAGACGGTTTAATTAAGCATTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATGACTGTTGCTCATCTTaGAAAGCATGCTCATGGGGT +
Preference number: 4 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNDCCSS*KACSWG
Trigger: ACCCCATGAGCATGCTTTTCAAGATGAGCAACAGTC...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp AAATGCTTAATTAAACCGTCTGTTAATGCATGCAGCTTGAAGCATCGAGGGGATCAGTGTCCAAGTTTTTaGGGAACTTTGTTCCACCTG +
Preference number: 4 (lower is better)
Translates to: KCLIKPSVNACSLKHRGDQCPSF*GTLFHL
Trigger: CAGGTGGAACAAAGTTCCTCAAAAACTTGGACACTG...ATCCCCTCGATGCTTCAAGCTGCATGCATTAACAGACGGTTTAATTAAGCATTT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp GTGTCACGGTGTCTGTGGTGTTTACATGCCAATATTTTATACATAGGTTCTCATTCACCAGTTCCTCCATaGCGTGAAAGTTTGTCTTGG +
Preference number: 4 (lower is better)
Translates to: VSRCLWCLHANILYIGSHSPVPP*RESLSW
Trigger: CCAAGACAAACTTTCACGCCATGGAGGAACTGGTGA...ATGAGAACCTATGTATAAAATATTGGCATGTAAACACCACAGACACCGTGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp GTGTCACGGTGTCTGTGGTGTTTACATGCCAATATTTTATACATAGGTTCTCATCACAAAAGGCTGTTCTaGTGGGTGGTCCGTGATAAT +
Preference number: 4 (lower is better)
Translates to: VSRCLWCLHANILYIGSHHKRLF*WVVRDN
Trigger: ATTATCACGGACCACCCACCAGAACAGCCTTTTGTG...ATGAGAACCTATGTATAAAATATTGGCATGTAAACACCACAGACACCGTGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATAGATGTGACTCTAGGTaGCTGATGTACGTGGAAGGA +
Preference number: 4 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNRCDSR*LMYVEG
Trigger: TCCTTCCACGTACATCAGCCACCTAGAGTCACATCT...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp GTGTCACGGTGTCTGTGGTGTTTACATGCCAATATTTTATACATAGGTTCTCATAGGAGTCCTGATTTGTaGCGCACAGTCGTTACAAAA +
Preference number: 4 (lower is better)
Translates to: VSRCLWCLHANILYIGSHRSPDL*RTVVTK
Trigger: TTTTGTAACGACTGTGCGTCACAAATCAGGACTCCT...ATGAGAACCTATGTATAAAATATTGGCATGTAAACACCACAGACACCGTGACAC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATGAGGATTTTGACGTGTaGCTCTCTGTCAAGTTCTTC +
Preference number: 4 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNEDFDV*LSVKFF
Trigger: GAAGAACTTGACAGAGAGCCACACGTCAAAATCCTC...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR TCA 90 bp CCTAAAGATAAAACTGCAGTGTGGGATCTTGGGAGAATAATTAGGAGGAACAAATGGGTTTTGCTAAGGTaGAGTTTAACAGCATGCTTG +
Preference number: 4 (lower is better)
Translates to: PKDKTAVWDLGRIIRRNKWVLLR*SLTACL
Trigger: CAAGCATGCTGTTAAACTTCACCTTAGCAAAACCCA...TTTGTTCCTCCTAATTATTCTCCCAAGATCCCACACTGCAGTTTTATCTTTAGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CCA 90 bp AGGGGATGCTCACAATTAAATCCCATTTACACAAAGTTCCAAACACTTAGCACTGTTACAAAAGAACACTaGGTGTCCAGTGTCCAAGTT +
Preference number: 4 (lower is better)
Translates to: RGCSQLNPIYTKFQTLSTVTKEH*VSSVQV
Trigger: AACTTGGACACTGGACACCCAGTGTTCTTTTGTAAC...AGTGCTAAGTGTTTGGAACTTTGTGTAAATGGGATTTAATTGTGAGCATCCCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR GCA 90 bp AGGGGATGCTCACAATTAAATCCCATTTACACAAAGTTCCAAACACTTAGCACTCGGCGACTTGGTTTGTaGTATTTGATTGTTAATCTG +
Preference number: 4 (lower is better)
Translates to: RGCSQLNPIYTKFQTLSTRRLGL*YLIVNL
Trigger: CAGATTAACAATCAAATAGCACAAACCAAGTCGCCG...AGTGCTAAGTGTTTGGAACTTTGTGTAAATGGGATTTAATTGTGAGCATCCCCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 90 bp TTGAAGCTGCCGTCGCTGGAGGCCTCCATCTTGATGGGTTCGCTCTaGTCGCTGCTGCACGGGGACGGCGTGGCCCGCTTGGGTGGCGAG +
Preference number: 5 (lower is better)
Translates to: LKLPSLEASILMGSL*SLLHGDGVARLGGE
Trigger: CTCGCCACCCAAGCGGGCCACGCCGTCCCCGTGCAGCAGCGAGCAGAGCGAACCCATCAAGATGGAGGCCTCCAGCGACGGCAGCTTCAA
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 90 bp TCCGCTCAGGGGCTTCACCAGCTCCTTGCCATTCTCTACGGGCTCTaGGGAGGGGCTCGCCTCCTTGCACGCATCTCTTGGTGGGCTGGG +
Preference number: 5 (lower is better)
Translates to: SAQGLHQLLAILYGL*GGARLLARISWWAG
Trigger: CCCAGCCCACCAAGAGATGCGTGCAAGGAGGCGAGCCCCTCCGCAGAGCCCGTAGAGAATGGCAAGGAGCTGGTGAAGCCCCTGAGCGGA
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 90 bp CCGCCAGCTTCGGGGAGACACTCGCGGGCGTATTGGAGGGAGACGTaGATGTGGTGGCTGCCAGTGGCACAGACTGCACCTTCTCGTCCA +
Preference number: 5 (lower is better)
Translates to: PPASGRHSRAYWRET*MWWLPVAQTAPSRP
Trigger: TGGACGAGAAGGTGCAGTCTGTGCCACTGGCAGCCACCACATTCACGTCTCCCTCCAATACGCCCGCGAGTGTCTCCCCGAAGCTGGCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 90 bp GCAGGGTCTTCGCCATGGCACTCTGGTGCCAGTCAAAGCTCCCGCTaGCACAGCTGCTGCTGCTACTGCTGCTGCTGCTACTGCTGCCAC +
Preference number: 5 (lower is better)
Translates to: AGSSPWHSGASQSSR*HSCCCYCCCCYCCH
Trigger: GTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGGCAGCGGGAGCTTTGACTGGCACCAGAGTGCCATGGCGAAGACCCTGC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 90 bp GTGGGGTGGCCACAGCTGCCTTCTCGGCCAGACTGTTGCTCATCTTaGAAAGCATGCTCATGGGGTCCAGCGCAGGCAGCGAGGGCTTGG +
Preference number: 5 (lower is better)
Translates to: VGWPQLPSRPDCCSS*KACSWGPAQAARAW
Trigger: CCAAGCCCTCGCTGCCTGCGCTGGACCCCATGAGCATGCTTTTCAAGATGAGCAACAGTCTGGCCGAGAAGGCAGCTGTGGCCACCCCAC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 90 bp AGCTCCCGCTGCCACAGCTGCTGCTGCTACTGCTGCTGCTGCTACTaGTGCCACCATTGTTCTCGGAGGAGGGCTGGTGCAGGTTCAGGT +
Preference number: 5 (lower is better)
Translates to: SSRCHSCCCYCCCCY*CHHCSRRRAGAGSG
Trigger: ACCTGAACCTGCACCAGCCCTCCTCCGAGAACAATGGTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGGCAGCGGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 90 bp GCCAGTCAAAGCTCCCGCTGCCACAGCTGCTGCTGCTACTGCTGCTaGTGCTACTGCTGCCACCATTGTTCTCGGAGGAGGGCTGGTGCA +
Preference number: 5 (lower is better)
Translates to: ASQSSRCHSCCCYCC*CYCCHHCSRRRAGA
Trigger: TGCACCAGCCCTCCTCCGAGAACAATGGTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGGCAGCGGGAGCTTTGACTGGC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 90 bp GGTGCCAGTCAAAGCTCCCGCTGCCACAGCTGCTGCTGCTACTGCTaGTGCTGCTACTGCTGCCACCATTGTTCTCGGAGGAGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: GASQSSRCHSCCCYC*CCYCCHHCSRRRAG
Trigger: ACCAGCCCTCCTCCGAGAACAATGGTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGGCAGCGGGAGCTTTGACTGGCACC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 90 bp TGGGTTCGCTCTGCTCGCTGCTGCACGGGGACGGCGTGGCCCGCTTaGGTGGCGAGAGCTTGCCTTCTGGCTCTTTCATTTTCTCCTCAA +
Preference number: 5 (lower is better)
Translates to: WVRSARCCTGTAWPA*VARACLLALSFSPQ
Trigger: TTGAGGAGAAAATGAAAGAGCCAGAAGGCAAGCTCTCGCCACCCAAGCGGGCCACGCCGTCCCCGTGCAGCAGCGAGCAGAGCGAACCCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 90 bp AGTCAAAGCTCCCGCTGCCACAGCTGCTGCTGCTACTGCTGCTGCTaGTACTGCTGCCACCATTGTTCTCGGAGGAGGGCTGGTGCAGGT +
Preference number: 5 (lower is better)
Translates to: SQSSRCHSCCCYCCC*YCCHHCSRRRAGAG
Trigger: ACCTGCACCAGCCCTCCTCCGAGAACAATGGTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGGCAGCGGGAGCTTTGACT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 90 bp TCTGGTGCCAGTCAAAGCTCCCGCTGCCACAGCTGCTGCTGCTACTaGTGCTGCTGCTACTGCTGCCACCATTGTTCTCGGAGGAGGGCT +
Preference number: 5 (lower is better)
Translates to: SGASQSSRCHSCCCY*CCCYCCHHCSRRRA
Trigger: AGCCCTCCTCCGAGAACAATGGTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGGCAGCGGGAGCTTTGACTGGCACCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 90 bp TGGCACTCTGGTGCCAGTCAAAGCTCCCGCTGCCACAGCTGCTGCTaGTACTGCTGCTGCTGCTACTGCTGCCACCATTGTTCTCGGAGG +
Preference number: 5 (lower is better)
Translates to: WHSGASQSSRCHSCC*YCCCCYCCHHCSRR
Trigger: CCTCCGAGAACAATGGTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGGCAGCGGGAGCTTTGACTGGCACCAGAGTGCCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 90 bp CCATGGCACTCTGGTGCCAGTCAAAGCTCCCGCTGCCACAGCTGCTaGTGCTACTGCTGCTGCTGCTACTGCTGCCACCATTGTTCTCGG +
Preference number: 5 (lower is better)
Translates to: PWHSGASQSSRCHSC*CYCCCCYCCHHCSR
Trigger: CCGAGAACAATGGTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGGCAGCGGGAGCTTTGACTGGCACCAGAGTGCCATGG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 90 bp ACTCGCGGGCGTATTGGAGGGAGACGTGAATGTGGTGGCTGCCAGTaGCACAGACTGCACCTTCTCGTCCAGCAAGGTGGTGATGGTGGG +
Preference number: 5 (lower is better)
Translates to: TRGRIGGRRECGGCQ*HRLHLLVQQGGDGG
Trigger: CCCACCATCACCACCTTGCTGGACGAGAAGGTGCAGTCTGTGCCACTGGCAGCCACCACATTCACGTCTCCCTCCAATACGCCCGCGAGT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 90 bp GACTGCAGGGCACTCAGGGGGTTCACAAAAGGCTGTTCTGGTGGGTaGTCCGTGATAATGGCTGTGCTGCCGCTGAGACCTCCGCTCAGG +
Preference number: 5 (lower is better)
Translates to: DCRALRGFTKGCSGG*SVIMAVLPLRPPLR
Trigger: CCTGAGCGGAGGTCTCAGCGGCAGCACAGCCATTATCACGGACCACCCACCAGAACAGCCTTTTGTGAACCCCCTGAGTGCCCTGCAGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 90 bp GACCGACTGCAGGGCACTCAGGGGGTTCACAAAAGGCTGTTCTGGTaGGTGGTCCGTGATAATGGCTGTGCTGCCGCTGAGACCTCCGCT +
Preference number: 5 (lower is better)
Translates to: DRLQGTQGVHKRLFW*VVRDNGCAAAETSA
Trigger: AGCGGAGGTCTCAGCGGCAGCACAGCCATTATCACGGACCACCCACCAGAACAGCCTTTTGTGAACCCCCTGAGTGCCCTGCAGTCGGTC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 90 bp GTATTGGAGGGAGACGTGAATGTGGTGGCTGCCAGTGGCACAGACTaGACCTTCTCGTCCAGCAAGGTGGTGATGGTGGGCGTGACCGGT +
Preference number: 5 (lower is better)
Translates to: VLEGDVNVVAASGTD*TFSSSKVVMVGVTG
Trigger: ACCGGTCACGCCCACCATCACCACCTTGCTGGACGAGAAGGTGCAGTCTGTGCCACTGGCAGCCACCACATTCACGTCTCCCTCCAATAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 90 bp GGAGACACTCGCGGGCGTATTGGAGGGAGACGTGAATGTGGTGGCTaGCAGTGGCACAGACTGCACCTTCTCGTCCAGCAAGGTGGTGAT +
Preference number: 5 (lower is better)
Translates to: GDTRGRIGGRRECGG*QWHRLHLLVQQGGD
Trigger: ATCACCACCTTGCTGGACGAGAAGGTGCAGTCTGTGCCACTGGCAGCCACCACATTCACGTCTCCCTCCAATACGCCCGCGAGTGTCTCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 90 bp CATGACCGACTGCAGGGCACTCAGGGGGTTCACAAAAGGCTGTTCTaGTGGGTGGTCCGTGATAATGGCTGTGCTGCCGCTGAGACCTCC +
Preference number: 5 (lower is better)
Translates to: HDRLQGTQGVHKRLF*WVVRDNGCAAAETS
Trigger: GGAGGTCTCAGCGGCAGCACAGCCATTATCACGGACCACCCACCAGAACAGCCTTTTGTGAACCCCCTGAGTGCCCTGCAGTCGGTCATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 90 bp GAAATAGCGGTCCAGATGCTCCGCCTTCTTGGCCTGAAGGGGTGGTaGGGTGGCCACAGCTGCCTTCTCGGCCAGACTGTTGCTCATCTT +
Preference number: 5 (lower is better)
Translates to: EIAVQMLRLLGLKGW*GGHSCLLGQTVAHL
Trigger: AAGATGAGCAACAGTCTGGCCGAGAAGGCAGCTGTGGCCACCCCACCACCCCTTCAGGCCAAGAAGGCGGAGCATCTGGACCGCTATTTC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 90 bp CTTTCCTCTTCTGCGCCGGAGTCGACTCCTCGGCCTCTTCCAGGGTaGCCCCGTCAATGTCAGACTTCTCAGAGATGCTGGAAGGAGTGG +
Preference number: 5 (lower is better)
Translates to: LSSSAPESTPRPLPG*PRQCQTSQRCWKEW
Trigger: CCACTCCTTCCAGCATCTCTGAGAAGTCTGACATTGACGGGGCCACCCTGGAAGAGGCCGAGGAGTCGACTCCGGCGCAGAAGAGGAAAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 90 bp CTCGCCTCCTTGCACGCATCTCTTGGTGGGCTGGGGCTATTCTCCTaGCTTTTGAAGCTGCCGTCGCTGGAGGCCTCCATCTTGATGGGT +
Preference number: 5 (lower is better)
Translates to: LASLHASLGGLGLFS*LLKLPSLEASILMG
Trigger: ACCCATCAAGATGGAGGCCTCCAGCGACGGCAGCTTCAAAAGTCAGGAGAATAGCCCCAGCCCACCAAGAGATGCGTGCAAGGAGGCGAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 90 bp GTGCCATGCATAGCTGGCCCCGTTCTGGTGGCCGTACCGATTATTTaGCGTGATGTAAGGGTTGGAGTTCTTCTGCAGGGCGTCGCTGGC +
Preference number: 5 (lower is better)
Translates to: VPCIAGPVLVAVPII*RDVRVGVLLQGVAG
Trigger: GCCAGCGACGCCCTGCAGAAGAACTCCAACCCTTACATCACGCCAAATAATCGGTACGGCCACCAGAACGGGGCCAGCTATGCATGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 90 bp AGGGCAGGCCTTGCTGAGTTCCTTCTCTGGACACATGTACTTGGCTaGGGGCTCTCCATCTGCCGCTTGTTCCTCCGGCTCTACGTCATC +
Preference number: 5 (lower is better)
Translates to: RAGLAEFLLWTHVLG*GLSICRLFLRLYVI
Trigger: GATGACGTAGAGCCGGAGGAACAAGCGGCAGATGGAGAGCCCTCAGCCAAGTACATGTGTCCAGAGAAGGAACTCAGCAAGGCCTGCCCT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACGAGGGGCTCGCCTCCTaGCACGCATCTCTTGGTGGG +
Preference number: 5 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYEGLAS*HASLGG
Trigger: CCCACCAAGAGATGCGTGCAAGGAGGCGAGCCCCTC...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 90 bp ATGCATAGCTGGCCCCGTTCTGGTGGCCGTACCGATTATTTGGCGTaGTGTAAGGGTTGGAGTTCTTCTGCAGGGCGTCGCTGGCATCAG +
Preference number: 5 (lower is better)
Translates to: MHSWPRSGGRTDYLA*CKGWSSSAGRRWHQ
Trigger: CTGATGCCAGCGACGCCCTGCAGAAGAACTCCAACCCTTACATCACGCCAAATAATCGGTACGGCCACCAGAACGGGGCCAGCTATGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 90 bp AGTTGTTGTACACGGCCTTCATCTGCTCCAGGCTATCAGACACGATaGTGTCCTCCAGGGGCACCTGGACCTCCTTGGTCTCCTCCTCAT +
Preference number: 5 (lower is better)
Translates to: SCCTRPSSAPGYQTR*CPPGAPGPPWSPPH
Trigger: ATGAGGAGGAGACCAAGGAGGTCCAGGTGCCCCTGGAGGACACCATCGTGTCTGATAGCCTGGAGCAGATGAAGGCCGTGTACAACAACT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTACTGCTGCCACCATaGTTCTCGGAGGAGGGCTGG +
Preference number: 5 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYLLLPP*FSEEGW
Trigger: CCAGCCCTCCTCCGAGAACAATGGTGGCAGCAGTAG...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACGACCAGCGCTTGGGGTaGTTGTTGTCGGTCTCGTGG +
Preference number: 5 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYDQRLG*LLSVSW
Trigger: CCACGAGACCGACAACAACAACCCCAAGCGCTGGTC...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCAGACCGTTTGCGAGGCTaGGACCAGCGCTTGGGGTTG +
Preference number: 5 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSDRLRG*DQRLGL
Trigger: CAACCCCAAGCGCTGGTCCAAGCCTCGCAAACGGTC...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCAGAGGGCTTGGCGGCCTaGCCCAGGTGGATGTTCATG +
Preference number: 5 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSEGLAA*PRWMFM
Trigger: CATGAACATCCACCTGGGCAAGGCCGCCAAGCCCTC...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 90 bp GAACTGCTTTCAAAGTCAGCCATCCGGTCACTCGTCTCACTGATGTaGGACTCGCTGTCCATTTCATGGCTGGAGAACTCAGCGGCCGGT +
Preference number: 5 (lower is better)
Translates to: ELLSKSAIRSLVSLM*DSLSISWLENSAAG
Trigger: ACCGGCCGCTGAGTTCTCCAGCCATGAAATGGACAGCGAGTCTCACATCAGTGAGACGAGTGACCGGATGGCTGACTTTGAAAGCAGTTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 90 bp ATCTGCTCCAGGCTATCAGACACGATGGTGTCCTCCAGGGGCACCTaGACCTCCTTGGTCTCCTCCTCATTCTTGATGGAACTGCTTTCA +
Preference number: 5 (lower is better)
Translates to: ICSRLSDTMVSSRGT*TSLVSSSFLMELLS
Trigger: TGAAAGCAGTTCCATCAAGAATGAGGAGGAGACCAAGGAGGTCCAGGTGCCCCTGGAGGACACCATCGTGTCTGATAGCCTGGAGCAGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACTCCAACAAAGACCGTTaGCGAGGCTTGGACCAGCGC +
Preference number: 5 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYSNKDR*RGLDQR
Trigger: GCGCTGGTCCAAGCCTCGCAAACGGTCTTTGTTGGA...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCATCAGACAGGGTGGCTTaGGGGGTTCCACCTGTGGAA +
Preference number: 5 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSSDRVA*GVPPVE
Trigger: TTCCACAGGTGGAACCCCCAAAGCCACCCTGTCTGA...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp TCACATCATGGTGTGCCATCGTCAACAACAAAACAGGGCACAGAGTGTGTCACGCCTTGCACGCATCTCTaGGTGGGCTGGGGCTATTCT +
Preference number: 5 (lower is better)
Translates to: SHHGVPSSTTKQGTECVTPCTHL*VGWGYS
Trigger: AGAATAGCCCCAGCCCACCAAGAGATGCGTGCAAGG...CGTGACACACTCTGTGCCCTGTTTTGTTGTTGACGATGGCACACCATGATGTGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCAGGCTTCACCAGCTCCTaGCCATTCTCTACGGGCTCT +
Preference number: 5 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSGFTSS*PFSTGS
Trigger: AGAGCCCGTAGAGAATGGCAAGGAGCTGGTGAAGCC...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AGGGGATGCTCACAATTAAATCCCATTTACACAAAGTTCCAAACACTTAGCACTGCAGGCAGCGAGGGCTaGGCGGCCTTGCCCAGGTGG +
Preference number: 5 (lower is better)
Translates to: RGCSQLNPIYTKFQTLSTAGSEG*AALPRW
Trigger: CCACCTGGGCAAGGCCGCCAAGCCCTCGCTGCCTGC...AGTGCTAAGTGTTTGGAACTTTGTGTAAATGGGATTTAATTGTGAGCATCCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACTCTGGACACATGTACTaGGCTGAGGGCTCTCCATCT +
Preference number: 5 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYSGHMY*AEGSPS
Trigger: AGATGGAGAGCCCTCAGCCAAGTACATGTGTCCAGA...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACGCAGCAGGGATGATTTaGGCTGCAACGGGTGTGACA +
Preference number: 5 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHAAGMI*AATGVT
Trigger: TGTCACACCCGTTGCAGCCAAAATCATCCCTGCTGC...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACCCAGGGTCTGGGTTTTaGTGGGAGACACGATTTCGC +
Preference number: 5 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHPGSGF*WETRFR
Trigger: GCGAAATCGTGTCTCCCACAAAAACCCAGACCCTGG...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp TCACATCATGGTGTGCCATCGTCAACAACAAAACAGGGCACAGAGTGTGTCACGCCATGGCGTGAAAGTTaGTCTTGGGCATGGGAGAGG +
Preference number: 5 (lower is better)
Translates to: SHHGVPSSTTKQGTECVTPWRES*SWAWER
Trigger: CCTCTCCCATGCCCAAGACAAACTTTCACGCCATGG...CGTGACACACTCTGTGCCCTGTTTTGTTGTTGACGATGGCACACCATGATGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AACACTGTACAGTTAGACCGAACAGTCCAGCCCAGAACAATCCTCTGCAGTGAACGACGGCAGATGTCTTaGCCGTTGTCACCGTGGATG +
Preference number: 5 (lower is better)
Translates to: NTVQLDRTVQPRTILCSERRQMS*PLSPWM
Trigger: CATCCACGGTGACAACGGCAAAGACATCTGCCGTCG...TTCACTGCAGAGGATTGTTCTGGGCTGGACTGTTCGGTCTAACTGTACAGTGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 90 bp CTTTGTCGCTCTTCCCTTTTGTCAAGTCTATGGGCTGGTCATTGTTaGCGTGGTAGAAATAGCGGTCCAGATGCTCCGCCTTCTTGGCCT +
Preference number: 5 (lower is better)
Translates to: LCRSSLLSSLWAGHC*RGRNSGPDAPPSWP
Trigger: AGGCCAAGAAGGCGGAGCATCTGGACCGCTATTTCTACCACGTCAACAATGACCAGCCCATAGACTTGACAAAAGGGAAGAGCGACAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 90 bp CGGATATATCTGACAAGGCATTCTCACGCAGCGGCGAGTTTGACATaGATGATACGACGGCAGATGTCTTTGCCGTTGTCACCGTGGATG +
Preference number: 5 (lower is better)
Translates to: RIYLTRHSHAAASLT*MIRRQMSLPLSPWM
Trigger: CATCCACGGTGACAACGGCAAAGACATCTGCCGTCGTATCATTCATGTCAAACTCGCCGCTGCGTGAGAATGCCTTGTCAGATATATCCG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 90 bp AATTTTGATAAGTCCCGTAGCCGGAAGCCCAGATGTGACTCTAGGTaGCTGATGTACGTGGAAGGAGTCCTGATTTGTGACGCACAGTCG +
Preference number: 5 (lower is better)
Translates to: NFDKSRSRKPRCDSR*LMYVEGVLICDAQS
Trigger: CGACTGTGCGTCACAAATCAGGACTCCTTCCACGTACATCAGCCACCTAGAGTCACATCTGGGCTTCCGGCTACGGGACTTATCAAAATT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AACACTGTACAGTTAGACCGAACAGTCCAGCCCAGAACAATCCTCTGCAGTGAACGCTTGGGGTTGTTGTaGTCGGTCTCGTGGTTGTCA +
Preference number: 5 (lower is better)
Translates to: NTVQLDRTVQPRTILCSERLGLL*SVSWLS
Trigger: TGACAACCACGAGACCGACAACAACAACCCCAAGCG...TTCACTGCAGAGGATTGTTCTGGGCTGGACTGTTCGGTCTAACTGTACAGTGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AACACTGTACAGTTAGACCGAACAGTCCAGCCCAGAACAATCCTCTGCAGTGAAGGCTTCTCTCTCTCCTaGGGTTTCTCATCCGGGACT +
Preference number: 5 (lower is better)
Translates to: NTVQLDRTVQPRTILCSEGFSLS*GFSSGT
Trigger: AGTCCCGGATGAGAAACCCAAGGAGAGAGAGAAGCC...TTCACTGCAGAGGATTGTTCTGGGCTGGACTGTTCGGTCTAACTGTACAGTGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACAGTTGGTACTTCACATaGGCCAGCCAATGGCTGATG +
Preference number: 5 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYSWYFT*ASQWLM
Trigger: CATCAGCCATTGGCTGGCCAATGTGAAGTACCAACT...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 90 bp GGGTGGCCCCGTCAATGTCAGACTTCTCAGAGATGCTGGAAGGAGTaGAGGATTTTGACGTGTGGCTCTCTGTCAAGTTCTTCAACATAT +
Preference number: 5 (lower is better)
Translates to: GWPRQCQTSQRCWKE*RILTCGSLSSSSTY
Trigger: ATATGTTGAAGAACTTGACAGAGAGCCACACGTCAAAATCCTCCACTCCTTCCAGCATCTCTGAGAAGTCTGACATTGACGGGGCCACCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACGAATTGGACAGGAAGTaGTTGTACACGGCCTTCATC +
Preference number: 5 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYELDRK*LYTAFI
Trigger: GATGAAGGCCGTGTACAACAACTTCCTGTCCAATTC...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp CAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCTTTCAGACACGATTTCGCTGTaGCCAAACATGGGTTTCAGG +
Preference number: 5 (lower is better)
Translates to: QKWRQEWLGEPVTTGYLSDTISL*PNMGFR
Trigger: CCTGAAACCCATGTTTGGCAACAGCGAAATCGTGTC...TGAAAGGTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACGTTCGGTGGACAATTTaGATAAGTCCCGTAGCCGGA +
Preference number: 5 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHVRWTI*ISPVAG
Trigger: TCCGGCTACGGGACTTATCAAAATTGTCCACCGAAC...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACTTCTCGGCCAGACTGTaGCTCATCTTGAAAAGCATG +
Preference number: 5 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHFSARL*LILKSM
Trigger: CATGCTTTTCAAGATGAGCAACAGTCTGGCCGAGAA...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AACACTGTACAGTTAGACCGAACAGTCCAGCCCAGAACAATCCTCTGCAGTGAATGTCGCTCTTCCCTTTaGTCAAGTCTATGGGCTGGT +
Preference number: 5 (lower is better)
Translates to: NTVQLDRTVQPRTILCSECRSSL*SSLWAG
Trigger: ACCAGCCCATAGACTTGACAAAAGGGAAGAGCGACA...TTCACTGCAGAGGATTGTTCTGGGCTGGACTGTTCGGTCTAACTGTACAGTGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp TGCTTCGTAGTACTCAGAGGGCTAAAGATGAAAGGGTGGGAAATGCCAGCACACCCTAAAGAGCAACCTTaGTCGCTCTTCCCTTTTGTC +
Preference number: 5 (lower is better)
Translates to: CFVVLRGLKMKGWEMPAHPKEQP*SLFPFV
Trigger: GACAAAAGGGAAGAGCGACAAAGGTTGCTCTTTAGG...GTGTGCTGGCATTTCCCACCCTTTCATCTTTAGCCCTCTGAGTACTACGAAGCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATCCGTGGATGAGGAAGTaGCCGGGGATGTGGACGTGG +
Preference number: 5 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNPWMRK*PGMWTW
Trigger: CCACGTCCACATCCCCGGCAACTTCCTCATCCACGG...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AACTGCCAGAAATGGAGACAAGAATGGCTTGGAGAGCCGGTTACCACGGGTTACCCAGTGTCCAAGTTTTaGAGGAACTTTGTTCCACCT +
Preference number: 5 (lower is better)
Translates to: NCQKWRQEWLGEPVTTGYPVSKF*RNFVPP
Trigger: AGGTGGAACAAAGTTCCTCAAAAACTTGGACACTGG...GTAACCCGTGGTAACCGGCTCTCCAAGCCATTCTTGTCTCCATTTCTGGCAGTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATCTCTCCATCTGCCGCTaGTTCCTCCGGCTCTACGTC +
Preference number: 5 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNLSICR*FLRLYV
Trigger: GACGTAGAGCCGGAGGAACAAGCGGCAGATGGAGAG...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp TCACATCATGGTGTGCCATCGTCAACAACAAAACAGGGCACAGAGTGTGTCACGGTCTCCTCCTCATTCTaGATGGAACTGCTTTCAAAG +
Preference number: 5 (lower is better)
Translates to: SHHGVPSSTTKQGTECVTVSSSF*MELLSK
Trigger: CTTTGAAAGCAGTTCCATCAAGAATGAGGAGGAGAC...CGTGACACACTCTGTGCCCTGTTTTGTTGTTGACGATGGCACACCATGATGTGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATGGCTTGGACCAGCGCTaGGGGTTGTTGTTGTCGGTC +
Preference number: 5 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNGLDQR*GLLLSV
Trigger: GACCGACAACAACAACCCCAAGCGCTGGTCCAAGCC...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AACACTGTACAGTTAGACCGAACAGTCCAGCCCAGAACAATCCTCTGCAGTGAAGGGACTGCTTTCTCCTaGTCCACTTCCTTTTTGATC +
Preference number: 5 (lower is better)
Translates to: NTVQLDRTVQPRTILCSEGTAFS*STSFLI
Trigger: GATCAAAAAGGAAGTGGACAAGGAGAAAGCAGTCCC...TTCACTGCAGAGGATTGTTCTGGGCTGGACTGTTCGGTCTAACTGTACAGTGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 90 bp CTACTGCTTCTCCAATTCAGAAACGAACAGGAGGTGGTCTTCCGGTaGTTTCCCGTGGGTTTTGCTAAGGTGAAGTTTAACAGCATGCTT +
Preference number: 5 (lower is better)
Translates to: LLLLQFRNEQEVVFR*FPVGFAKVKFNSML
Trigger: AAGCATGCTGTTAAACTTCACCTTAGCAAAACCCACGGGAAATCACCGGAAGACCACCTCCTGTTCGTTTCTGAATTGGAGAAGCAGTAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp CCTAAAGATAAAACTGCAGTGTGGGATCTTGGGAGAATAATTAGGAGGAACAAAGGCACCTGGACCTCCTaGGTCTCCTCCTCATTCTTG +
Preference number: 5 (lower is better)
Translates to: PKDKTAVWDLGRIIRRNKGTWTS*VSSSFL
Trigger: CAAGAATGAGGAGGAGACCAAGGAGGTCCAGGTGCC...TTTGTTCCTCCTAATTATTCTCCCAAGATCCCACACTGCAGTTTTATCTTTAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATCAGCGCTTGGGGTTGTaGTTGTCGGTCTCGTGGTTG +
Preference number: 5 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNQRLGL*LSVSWL
Trigger: CAACCACGAGACCGACAACAACAACCCCAAGCGCTG...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AACACTGTACAGTTAGACCGAACAGTCCAGCCCAGAACAATCCTCTGCAGTGAAATTTTCTCCTCAACTTaGGCAACTTTCTCCGTGACT +
Preference number: 5 (lower is better)
Translates to: NTVQLDRTVQPRTILCSEIFSST*ATFSVT
Trigger: AGTCACGGAGAAAGTTGCCAAAGTTGAGGAGAAAAT...TTCACTGCAGAGGATTGTTCTGGGCTGGACTGTTCGGTCTAACTGTACAGTGTT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AAATGCTTAATTAAACCGTCTGTTAATGCATGCAGCTTGAAGCATCGAGGGGATTTGGACAGGAAGTTGTaGTACACGGCCTTCATCTGC +
Preference number: 5 (lower is better)
Translates to: KCLIKPSVNACSLKHRGDLDRKL*YTAFIC
Trigger: GCAGATGAAGGCCGTGTACAACAACTTCCTGTCCAA...ATCCCCTCGATGCTTCAAGCTGCATGCATTAACAGACGGTTTAATTAAGCATTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp CAACAGCTGATTATATGCACCTCTCTATTAAACACTGTACAGTTAGACCGAACAGCCGAGTTTGTGACCTaGATAAAGTGGCCAGTGACC +
Preference number: 5 (lower is better)
Translates to: QQLIICTSLLNTVQLDRTAEFVT*IKWPVT
Trigger: GGTCACTGGCCACTTTATCAAGGTCACAAACTCGGC...TGTTCGGTCTAACTGTACAGTGTTTAATAGAGAGGTGCATATAATCAGCTGTTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp CCTAAAGATAAAACTGCAGTGTGGGATCTTGGGAGAATAATTAGGAGGAACAAACAGATGTCTTTGCCGTaGTCACCGTGGATGAGGAAG +
Preference number: 5 (lower is better)
Translates to: PKDKTAVWDLGRIIRRNKQMSLP*SPWMRK
Trigger: CTTCCTCATCCACGGTGACAACGGCAAAGACATCTG...TTTGTTCCTCCTAATTATTCTCCCAAGATCCCACACTGCAGTTTTATCTTTAGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp TCACATCATGGTGTGCCATCGTCAACAACAAAACAGGGCACAGAGTGTGTCACGCTTGGTTTGTGCTATTaGATTGTTAATCTGTTCGGT +
Preference number: 5 (lower is better)
Translates to: SHHGVPSSTTKQGTECVTLGLCY*IVNLFG
Trigger: ACCGAACAGATTAACAATCAAATAGCACAAACCAAG...CGTGACACACTCTGTGCCCTGTTTTGTTGTTGACGATGGCACACCATGATGTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 90 bp GAGGATGTCACCAGTTTTTCAGACGGCGACTTGGTTTGTGCTATTTaGTTGTTAATCTGTTCGGTGGACAATTTTGATAAGTCCCGTAGC +
Preference number: 5 (lower is better)
Translates to: EDVTSFSDGDLVCAI*LLICSVDNFDKSRS
Trigger: GCTACGGGACTTATCAAAATTGTCCACCGAACAGATTAACAATCAAATAGCACAAACCAAGTCGCCGTCTGAAAAACTGGTGACATCCTC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp GGTTCTCATATGGTGTCAGCTGTCAGTTATTTCTGCAAATTAACTGCCAGAAATAAGGAGTGGAGGATTTaGACGTGTGGCTCTCTGTCA +
Preference number: 5 (lower is better)
Translates to: GSHMVSAVSYFCKLTARNKEWRI*TCGSLS
Trigger: TGACAGAGAGCCACACGTCAAAATCCTCCACTCCTT...ATTTCTGGCAGTTAATTTGCAGAAATAACTGACAGCTGACACCATATGAGAACC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp GTGTCACGGTGTCTGTGGTGTTTACATGCCAATATTTTATACATAGGTTCTCATAGACTGTTGCTCATCTaGAAAAGCATGCTCATGGGG +
Preference number: 5 (lower is better)
Translates to: VSRCLWCLHANILYIGSHRLLLI*KSMLMG
Trigger: CCCCATGAGCATGCTTTTCAAGATGAGCAACAGTCT...ATGAGAACCTATGTATAAAATATTGGCATGTAAACACCACAGACACCGTGACAC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp AGGGGATGCTCACAATTAAATCCCATTTACACAAAGTTCCAAACACTTAGCACTAGTTTAACAGCATGCTaGCTCGCAAAGGTCCGATTA +
Preference number: 5 (lower is better)
Translates to: RGCSQLNPIYTKFQTLSTSLTAC*LAKVRL
Trigger: TAATCGGACCTTTGCGAGCAAGCATGCTGTTAAACT...AGTGCTAAGTGTTTGGAACTTTGTGTAAATGGGATTTAATTGTGAGCATCCCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS-3UTR CAA 90 bp CAACAGCTGATTATATGCACCTCTCTATTAAACACTGTACAGTTAGACCGAACAAGACGGCGACTTGGTTaGTGCTATTTGATTGTTAAT +
Preference number: 5 (lower is better)
Translates to: QQLIICTSLLNTVQLDRTRRRLG*CYLIVN
Trigger: ATTAACAATCAAATAGCACAAACCAAGTCGCCGTCT...TGTTCGGTCTAACTGTACAGTGTTTAATAGAGAGGTGCATATAATCAGCTGTTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 72 bp CCGTCGCTGGAGGCCTCCATCTTGATGGGTTCGCTCTaGTCGCTGCTGCACGGGGACGGCGTGGCCCGCTTG +
Preference number: 6 (lower is better)
Translates to: PSLEASILMGSL*SLLHGDGVARL
Trigger: CAAGCGGGCCACGCCGTCCCCGTGCAGCAGCGAGCAGAGCGAACCCATCAAGATGGAGGCCTCCAGCGACGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp TGGGTTCGCTCTGCTCGCTGCTGCACGGGGACGGCGTaGCCCGCTTGGGTGGCGAGAGCTTGCCTTCTGGCT +
Preference number: 6 (lower is better)
Translates to: WVRSARCCTGTA*PAWVARACLLA
Trigger: AGCCAGAAGGCAAGCTCTCGCCACCCAAGCGGGCCACGCCGTCCCCGTGCAGCAGCGAGCAGAGCGAACCCA
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 72 bp CCGCTGAGACCTCCGCTCAGGGGCTTCACCAGCTCCTaGCCATTCTCTACGGGCTCTGCGGAGGGGCTCGCC +
Preference number: 6 (lower is better)
Translates to: PLRPPLRGFTSS*PFSTGSAEGLA
Trigger: GGCGAGCCCCTCCGCAGAGCCCGTAGAGAATGGCAAGGAGCTGGTGAAGCCCCTGAGCGGAGGTCTCAGCGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 90 bp GCTGTGCTGCCGCTGAGACCTCCGCTCAGGGGCTTCACCAGCTCCTaGCCATTCTCTACGGGCTCTGCGGAGGGGCTCGCCTCCTTGCAC +
Preference number: 6 (lower is better)
Translates to: AVLPLRPPLRGFTSS*PFSTGSAEGLASLH
Trigger: GTGCAAGGAGGCGAGCCCCTCCGCAGAGCCCGTAGAGAATGGCAAGGAGCTGGTGAAGCCCCTGAGCGGAGGTCTCAGCGGCAGCACAGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 72 bp TCCACCGCCAGCTTCGGGGAGACACTCGCGGGCGTATaGGAGGGAGACGTGAATGTGGTGGCTGCCAGTGGC +
Preference number: 6 (lower is better)
Translates to: STASFGETLAGV*EGDVNVVAASG
Trigger: GCCACTGGCAGCCACCACATTCACGTCTCCCTCCAATACGCCCGCGAGTGTCTCCCCGAAGCTGGCGGTGGA
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 72 bp CTCTGCTCGCTGCTGCACGGGGACGGCGTGGCCCGCTaGGGTGGCGAGAGCTTGCCTTCTGGCTCTTTCATT +
Preference number: 6 (lower is better)
Translates to: LCSLLHGDGVAR*GGESLPSGSFI
Trigger: AATGAAAGAGCCAGAAGGCAAGCTCTCGCCACCCAAGCGGGCCACGCCGTCCCCGTGCAGCAGCGAGCAGAG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 72 bp GACACCTGCTGCAGGGTCTTCGCCATGGCACTCTGGTaGCAGTCAAAGCTCCCGCTGCCACAGCTGCTGCTG +
Preference number: 6 (lower is better)
Translates to: DTCCRVFAMALW*QSKLPLPQLLL
Trigger: CAGCAGCAGCTGTGGCAGCGGGAGCTTTGACTGGCACCAGAGTGCCATGGCGAAGACCCTGCAGCAGGTGTC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 72 bp GGGCTTCACCAGCTCCTTGCCATTCTCTACGGGCTCTaGGGAGGGGCTCGCCTCCTTGCACGCATCTCTTGG +
Preference number: 6 (lower is better)
Translates to: GLHQLLAILYGL*GGARLLARISW
Trigger: CCAAGAGATGCGTGCAAGGAGGCGAGCCCCTCCGCAGAGCCCGTAGAGAATGGCAAGGAGCTGGTGAAGCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp TGGGACACCTGCTGCAGGGTCTTCGCCATGGCACTCTaGTGCCAGTCAAAGCTCCCGCTGCCACAGCTGCTG +
Preference number: 6 (lower is better)
Translates to: WDTCCRVFAMAL*CQSKLPLPQLL
Trigger: CAGCAGCTGTGGCAGCGGGAGCTTTGACTGGCACCAGAGTGCCATGGCGAAGACCCTGCAGCAGGTGTCCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp CTCGCTGCTGCACGGGGACGGCGTGGCCCGCTTGGGTaGCGAGAGCTTGCCTTCTGGCTCTTTCATTTTCTC +
Preference number: 6 (lower is better)
Translates to: LAAARGRRGPLG*RELAFWLFHFL
Trigger: GAGAAAATGAAAGAGCCAGAAGGCAAGCTCTCGCCACCCAAGCGGGCCACGCCGTCCCCGTGCAGCAGCGAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp TCTGCTCGCTGCTGCACGGGGACGGCGTGGCCCGCTTaGGTGGCGAGAGCTTGCCTTCTGGCTCTTTCATTT +
Preference number: 6 (lower is better)
Translates to: SARCCTGTAWPA*VARACLLALSF
Trigger: AAATGAAAGAGCCAGAAGGCAAGCTCTCGCCACCCAAGCGGGCCACGCCGTCCCCGTGCAGCAGCGAGCAGA
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp GTCCAGATGCTCCGCCTTCTTGGCCTGAAGGGGTGGTaGGGTGGCCACAGCTGCCTTCTCGGCCAGACTGTT +
Preference number: 6 (lower is better)
Translates to: VQMLRLLGLKGW*GGHSCLLGQTV
Trigger: AACAGTCTGGCCGAGAAGGCAGCTGTGGCCACCCCACCACCCCTTCAGGCCAAGAAGGCGGAGCATCTGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 72 bp CCATTCTCTACGGGCTCTGCGGAGGGGCTCGCCTCCTaGCACGCATCTCTTGGTGGGCTGGGGCTATTCTCC +
Preference number: 6 (lower is better)
Translates to: PFSTGSAEGLAS*HASLGGLGLFS
Trigger: GGAGAATAGCCCCAGCCCACCAAGAGATGCGTGCAAGGAGGCGAGCCCCTCCGCAGAGCCCGTAGAGAATGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 72 bp TCCCGCTGCCACAGCTGCTGCTGCTACTGCTGCTGCTaGTACTGCTGCCACCATTGTTCTCGGAGGAGGGCT +
Preference number: 6 (lower is better)
Translates to: SRCHSCCCYCCC*YCCHHCSRRRA
Trigger: AGCCCTCCTCCGAGAACAATGGTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGGCAGCGGGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 72 bp AGCTCCCGCTGCCACAGCTGCTGCTGCTACTGCTGCTaGTGCTACTGCTGCCACCATTGTTCTCGGAGGAGG +
Preference number: 6 (lower is better)
Translates to: SSRCHSCCCYCC*CYCCHHCSRRR
Trigger: CCTCCTCCGAGAACAATGGTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGGCAGCGGGAGCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 72 bp TCGCCATGGCACTCTGGTGCCAGTCAAAGCTCCCGCTaGCACAGCTGCTGCTGCTACTGCTGCTGCTGCTAC +
Preference number: 6 (lower is better)
Translates to: SPWHSGASQSSR*HSCCCYCCCCY
Trigger: GTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGGCAGCGGGAGCTTTGACTGGCACCAGAGTGCCATGGCGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp TCTGCGCCGGAGTCGACTCCTCGGCCTCTTCCAGGGTaGCCCCGTCAATGTCAGACTTCTCAGAGATGCTGG +
Preference number: 6 (lower is better)
Translates to: SAPESTPRPLPG*PRQCQTSQRCW
Trigger: CCAGCATCTCTGAGAAGTCTGACATTGACGGGGCCACCCTGGAAGAGGCCGAGGAGTCGACTCCGGCGCAGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 72 bp TTCTGCAGGGCGTCGCTGGCATCAGACAGGGTGGCTTaGGGGGTTCCACCTGTGGAATCAGGGGAGCTAGGC +
Preference number: 6 (lower is better)
Translates to: FCRASLASDRVA*GVPPVESGELG
Trigger: GCCTAGCTCCCCTGATTCCACAGGTGGAACCCCCAAAGCCACCCTGTCTGATGCCAGCGACGCCCTGCAGAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 90 bp TTGGAGTTCTTCTGCAGGGCGTCGCTGGCATCAGACAGGGTGGCTTaGGGGGTTCCACCTGTGGAATCAGGGGAGCTAGGCAGCTCCAGC +
Preference number: 6 (lower is better)
Translates to: LEFFCRASLASDRVA*GVPPVESGELGSSS
Trigger: GCTGGAGCTGCCTAGCTCCCCTGATTCCACAGGTGGAACCCCCAAAGCCACCCTGTCTGATGCCAGCGACGCCCTGCAGAAGAACTCCAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 72 bp CACAGCTGCTGCTGCTACTGCTGCTGCTGCTACTGCTaGCACCATTGTTCTCGGAGGAGGGCTGGTGCAGGT +
Preference number: 6 (lower is better)
Translates to: HSCCCYCCCCYC*HHCSRRRAGAG
Trigger: ACCTGCACCAGCCCTCCTCCGAGAACAATGGTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 72 bp TGCCACAGCTGCTGCTGCTACTGCTGCTGCTGCTACTaGTGCCACCATTGTTCTCGGAGGAGGGCTGGTGCA +
Preference number: 6 (lower is better)
Translates to: CHSCCCYCCCCY*CHHCSRRRAGA
Trigger: TGCACCAGCCCTCCTCCGAGAACAATGGTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 72 bp CAAAGCTCCCGCTGCCACAGCTGCTGCTGCTACTGCTaGTGCTGCTACTGCTGCCACCATTGTTCTCGGAGG +
Preference number: 6 (lower is better)
Translates to: QSSRCHSCCCYC*CCYCCHHCSRR
Trigger: CCTCCGAGAACAATGGTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGGCAGCGGGAGCTTTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 72 bp TCTGGTGCCAGTCAAAGCTCCCGCTGCCACAGCTGCTaGTGCTACTGCTGCTGCTGCTACTGCTGCCACCAT +
Preference number: 6 (lower is better)
Translates to: SGASQSSRCHSC*CYCCCCYCCHH
Trigger: ATGGTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGGCAGCGGGAGCTTTGACTGGCACCAGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 72 bp CGCGGGCGTATTGGAGGGAGACGTGAATGTGGTGGCTaGCAGTGGCACAGACTGCACCTTCTCGTCCAGCAA +
Preference number: 6 (lower is better)
Translates to: RGRIGGRRECGG*QWHRLHLLVQQ
Trigger: TTGCTGGACGAGAAGGTGCAGTCTGTGCCACTGGCAGCCACCACATTCACGTCTCCCTCCAATACGCCCGCG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp AGTTCTTCTGCAGGGCGTCGCTGGCATCAGACAGGGTaGCTTTGGGGGTTCCACCTGTGGAATCAGGGGAGC +
Preference number: 6 (lower is better)
Translates to: SSSAGRRWHQTG*LWGFHLWNQGS
Trigger: GCTCCCCTGATTCCACAGGTGGAACCCCCAAAGCCACCCTGTCTGATGCCAGCGACGCCCTGCAGAAGAACT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 90 bp CCACAGCTGCTGCTGCTACTGCTGCTGCTGCTACTGCTGCCACCATaGTTCTCGGAGGAGGGCTGGTGCAGGTTCAGGTTGAGGTTGGAC +
Preference number: 6 (lower is better)
Translates to: PQLLLLLLLLLLLPP*FSEEGWCRFRLRLD
Trigger: GTCCAACCTCAACCTGAACCTGCACCAGCCCTCCTCCGAGAACAATGGTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 90 bp TTTTTGATCTCCACCGCCAGCTTCGGGGAGACACTCGCGGGCGTATaGGAGGGAGACGTGAATGTGGTGGCTGCCAGTGGCACAGACTGC +
Preference number: 6 (lower is better)
Translates to: FLISTASFGETLAGV*EGDVNVVAASGTDC
Trigger: GCAGTCTGTGCCACTGGCAGCCACCACATTCACGTCTCCCTCCAATACGCCCGCGAGTGTCTCCCCGAAGCTGGCGGTGGAGATCAAAAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 72 bp CCACAGCTGCCTTCTCGGCCAGACTGTTGCTCATCTTaGAAAGCATGCTCATGGGGTCCAGCGCAGGCAGCG +
Preference number: 6 (lower is better)
Translates to: PQLPSRPDCCSS*KACSWGPAQAA
Trigger: CGCTGCCTGCGCTGGACCCCATGAGCATGCTTTTCAAGATGAGCAACAGTCTGGCCGAGAAGGCAGCTGTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 72 bp AGTCAAAGCTCCCGCTGCCACAGCTGCTGCTGCTACTaGTGCTGCTGCTACTGCTGCCACCATTGTTCTCGG +
Preference number: 6 (lower is better)
Translates to: SQSSRCHSCCCY*CCCYCCHHCSR
Trigger: CCGAGAACAATGGTGGCAGCAGTAGCAGCAGCAGCAGTAGCAGCAGCAGCTGTGGCAGCGGGAGCTTTGACT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp CAGGGCACTCAGGGGGTTCACAAAAGGCTGTTCTGGTaGGTGGTCCGTGATAATGGCTGTGCTGCCGCTGAG +
Preference number: 6 (lower is better)
Translates to: QGTQGVHKRLFW*VVRDNGCAAAE
Trigger: CTCAGCGGCAGCACAGCCATTATCACGGACCACCCACCAGAACAGCCTTTTGTGAACCCCCTGAGTGCCCTG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp CTGCAGGGCACTCAGGGGGTTCACAAAAGGCTGTTCTaGTGGGTGGTCCGTGATAATGGCTGTGCTGCCGCT +
Preference number: 6 (lower is better)
Translates to: LQGTQGVHKRLF*WVVRDNGCAAA
Trigger: AGCGGCAGCACAGCCATTATCACGGACCACCCACCAGAACAGCCTTTTGTGAACCCCCTGAGTGCCCTGCAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 72 bp GCCACAGCTGCCTTCTCGGCCAGACTGTTGCTCATCTaGAAAAGCATGCTCATGGGGTCCAGCGCAGGCAGC +
Preference number: 6 (lower is better)
Translates to: ATAAFSARLLLI*KSMLMGSSAGS
Trigger: GCTGCCTGCGCTGGACCCCATGAGCATGCTTTTCAAGATGAGCAACAGTCTGGCCGAGAAGGCAGCTGTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 90 bp TCGCTGCTGCACGGGGACGGCGTGGCCCGCTTGGGTGGCGAGAGCTaGCCTTCTGGCTCTTTCATTTTCTCCTCAACTTTGGCAACTTTC +
Preference number: 6 (lower is better)
Translates to: SLLHGDGVARLGGES*PSGSFIFSSTLATF
Trigger: GAAAGTTGCCAAAGTTGAGGAGAAAATGAAAGAGCCAGAAGGCAAGCTCTCGCCACCCAAGCGGGCCACGCCGTCCCCGTGCAGCAGCGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 72 bp TGGCCCCGTTCTGGTGGCCGTACCGATTATTTGGCGTaGTGTAAGGGTTGGAGTTCTTCTGCAGGGCGTCGC +
Preference number: 6 (lower is better)
Translates to: WPRSGGRTDYLA*CKGWSSSAGRR
Trigger: GCGACGCCCTGCAGAAGAACTCCAACCCTTACATCACGCCAAATAATCGGTACGGCCACCAGAACGGGGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 72 bp TTGCACGCATCTCTTGGTGGGCTGGGGCTATTCTCCTaGCTTTTGAAGCTGCCGTCGCTGGAGGCCTCCATC +
Preference number: 6 (lower is better)
Translates to: LHASLGGLGLFS*LLKLPSLEASI
Trigger: GATGGAGGCCTCCAGCGACGGCAGCTTCAAAAGTCAGGAGAATAGCCCCAGCCCACCAAGAGATGCGTGCAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 72 bp TACGACGGCAGATGTCTTTGCCGTTGTCACCGTGGATaGGGAAGTTGCCGGGGATGTGGACGTGGGGGACAA +
Preference number: 6 (lower is better)
Translates to: YDGRCLCRCHRG*GSCRGCGRGGQ
Trigger: TTGTCCCCCACGTCCACATCCCCGGCAACTTCCTCATCCACGGTGACAACGGCAAAGACATCTGCCGTCGTA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp TCTGAGACTTTCGGGCCTCGAAGTGCCATGCATAGCTaGCCCCGTTCTGGTGGCCGTACCGATTATTTGGCG +
Preference number: 6 (lower is better)
Translates to: SETFGPRSAMHS*PRSGGRTDYLA
Trigger: CGCCAAATAATCGGTACGGCCACCAGAACGGGGCCAGCTATGCATGGCACTTCGAGGCCCGAAAGTCTCAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp CGTATTGGAGGGAGACGTGAATGTGGTGGCTGCCAGTaGCACAGACTGCACCTTCTCGTCCAGCAAGGTGGT +
Preference number: 6 (lower is better)
Translates to: RIGGRRECGGCQ*HRLHLLVQQGG
Trigger: ACCACCTTGCTGGACGAGAAGGTGCAGTCTGTGCCACTGGCAGCCACCACATTCACGTCTCCCTCCAATACG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp GCACTCAGGGGGTTCACAAAAGGCTGTTCTGGTGGGTaGTCCGTGATAATGGCTGTGCTGCCGCTGAGACCT +
Preference number: 6 (lower is better)
Translates to: ALRGFTKGCSGG*SVIMAVLPLRP
Trigger: AGGTCTCAGCGGCAGCACAGCCATTATCACGGACCACCCACCAGAACAGCCTTTTGTGAACCCCCTGAGTGC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 72 bp CTTGCTGAGTTCCTTCTCTGGACACATGTACTTGGCTaGGGGCTCTCCATCTGCCGCTTGTTCCTCCGGCTC +
Preference number: 6 (lower is better)
Translates to: LAEFLLWTHVLG*GLSICRLFLRL
Trigger: GAGCCGGAGGAACAAGCGGCAGATGGAGAGCCCTCAGCCAAGTACATGTGTCCAGAGAAGGAACTCAGCAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp CCAACAAAGACCGTTTGCGAGGCTTGGACCAGCGCTTaGGGTTGTTGTTGTCGGTCTCGTGGTTGTCATCGC +
Preference number: 6 (lower is better)
Translates to: PTKTVCEAWTSA*GCCCRSRGCHR
Trigger: GCGATGACAACCACGAGACCGACAACAACAACCCCAAGCGCTGGTCCAAGCCTCGCAAACGGTCTTTGTTGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 72 bp TCATCCGGGACTGCTTTCTCCTTGTCCACTTCCTTTTaGATCTCCACCGCCAGCTTCGGGGAGACACTCGCG +
Preference number: 6 (lower is better)
Translates to: SSGTAFSLSTSF*ISTASFGETLA
Trigger: CGCGAGTGTCTCCCCGAAGCTGGCGGTGGAGATCAAAAAGGAAGTGGACAAGGAGAAAGCAGTCCCGGATGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 90 bp GTGTCCTCCAGGGGCACCTGGACCTCCTTGGTCTCCTCCTCATTCTaGATGGAACTGCTTTCAAAGTCAGCCATCCGGTCACTCGTCTCA +
Preference number: 6 (lower is better)
Translates to: VSSRGTWTSLVSSSF*MELLSKSAIRSLVS
Trigger: TGAGACGAGTGACCGGATGGCTGACTTTGAAAGCAGTTCCATCAAGAATGAGGAGGAGACCAAGGAGGTCCAGGTGCCCCTGGAGGACAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 90 bp TTGGGTTTCTCATCCGGGACTGCTTTCTCCTTGTCCACTTCCTTTTaGATCTCCACCGCCAGCTTCGGGGAGACACTCGCGGGCGTATTG +
Preference number: 6 (lower is better)
Translates to: LGFSSGTAFSLSTSF*ISTASFGETLAGVL
Trigger: CAATACGCCCGCGAGTGTCTCCCCGAAGCTGGCGGTGGAGATCAAAAAGGAAGTGGACAAGGAGAAAGCAGTCCCGGATGAGAAACCCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 72 bp CGATTTCGCTGTTGCCAAACATGGGTTTCAGGGGCGTaGTCTTCCCCGAGGAACCCAGGGACAACTTCATCA +
Preference number: 6 (lower is better)
Translates to: RFRCCQTWVSGA*SSPRNPGTTSS
Trigger: TGATGAAGTTGTCCCTGGGTTCCTCGGGGAAGAGCACGCCCCTGAAACCCATGTTTGGCAACAGCGAAATCG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp AGGCTATCAGACACGATGGTGTCCTCCAGGGGCACCTaGACCTCCTTGGTCTCCTCCTCATTCTTGATGGAA +
Preference number: 6 (lower is better)
Translates to: RLSDTMVSSRGT*TSLVSSSFLME
Trigger: TTCCATCAAGAATGAGGAGGAGACCAAGGAGGTCCAGGTGCCCCTGGAGGACACCATCGTGTCTGATAGCCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp ATAGCTGGCCCCGTTCTGGTGGCCGTACCGATTATTTaGCGTGATGTAAGGGTTGGAGTTCTTCTGCAGGGC +
Preference number: 6 (lower is better)
Translates to: IAGPVLVAVPII*RDVRVGVLLQG
Trigger: GCCCTGCAGAAGAACTCCAACCCTTACATCACGCCAAATAATCGGTACGGCCACCAGAACGGGGCCAGCTAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp GGCTGCTGGGTGGAGAGACCAGGGTCTGGGTTTTTGTaGGAGACACGATTTCGCTGTTGCCAAACATGGGTT +
Preference number: 6 (lower is better)
Translates to: GCWVERPGSGFL*ETRFRCCQTWV
Trigger: AACCCATGTTTGGCAACAGCGAAATCGTGTCTCCCACAAAAACCCAGACCCTGGTCTCTCCACCCAGCAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 72 bp GACACGATGGTGTCCTCCAGGGGCACCTGGACCTCCTaGGTCTCCTCCTCATTCTTGATGGAACTGCTTTCA +
Preference number: 6 (lower is better)
Translates to: DTMVSSRGTWTS*VSSSFLMELLS
Trigger: TGAAAGCAGTTCCATCAAGAATGAGGAGGAGACCAAGGAGGTCCAGGTGCCCCTGGAGGACACCATCGTGTC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 72 bp TCCAACAAAGACCGTTTGCGAGGCTTGGACCAGCGCTaGGGGTTGTTGTTGTCGGTCTCGTGGTTGTCATCG +
Preference number: 6 (lower is better)
Translates to: SNKDRLRGLDQR*GLLLSVSWLSS
Trigger: CGATGACAACCACGAGACCGACAACAACAACCCCAAGCGCTGGTCCAAGCCTCGCAAACGGTCTTTGTTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 72 bp AGGGTCTGGGTTTTTGTGGGAGACACGATTTCGCTGTaGCCAAACATGGGTTTCAGGGGCGTGCTCTTCCCC +
Preference number: 6 (lower is better)
Translates to: RVWVFVGDTISL*PNMGFRGVLFP
Trigger: GGGGAAGAGCACGCCCCTGAAACCCATGTTTGGCAACAGCGAAATCGTGTCTCCCACAAAAACCCAGACCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 90 bp AGGCTATCAGACACGATGGTGTCCTCCAGGGGCACCTGGACCTCCTaGGTCTCCTCCTCATTCTTGATGGAACTGCTTTCAAAGTCAGCC +
Preference number: 6 (lower is better)
Translates to: RLSDTMVSSRGTWTS*VSSSFLMELLSKSA
Trigger: GGCTGACTTTGAAAGCAGTTCCATCAAGAATGAGGAGGAGACCAAGGAGGTCCAGGTGCCCCTGGAGGACACCATCGTGTCTGATAGCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 90 bp GGCTTCTCTCTCTCCTTGGGTTTCTCATCCGGGACTGCTTTCTCCTaGTCCACTTCCTTTTTGATCTCCACCGCCAGCTTCGGGGAGACA +
Preference number: 6 (lower is better)
Translates to: GFSLSLGFSSGTAFS*STSFLISTASFGET
Trigger: TGTCTCCCCGAAGCTGGCGGTGGAGATCAAAAAGGAAGTGGACAAGGAGAAAGCAGTCCCGGATGAGAAACCCAAGGAGAGAGAGAAGCC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp AAGTCCCGTAGCCGGAAGCCCAGATGTGACTCTAGGTaGCTGATGTACGTGGAAGGAGTCCTGATTTGTGAC +
Preference number: 6 (lower is better)
Translates to: KSRSRKPRCDSR*LMYVEGVLICD
Trigger: GTCACAAATCAGGACTCCTTCCACGTACATCAGCCACCTAGAGTCACATCTGGGCTTCCGGCTACGGGACTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 72 bp TCCAGAGAAGGTTTCTTCCGAGCAGCAGGGATGATTTaGGCTGCAACGGGTGTGACAGGTTCCTTGAGAGGC +
Preference number: 6 (lower is better)
Translates to: SREGFFRAAGMI*AATGVTGSLRG
Trigger: GCCTCTCAAGGAACCTGTCACACCCGTTGCAGCCAAAATCATCCCTGCTGCTCGGAAGAAACCTTCTCTGGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 90 bp AGCTCCAGCTCCAGAGAAGGTTTCTTCCGAGCAGCAGGGATGATTTaGGCTGCAACGGGTGTGACAGGTTCCTTGAGAGGCACTTTTTGG +
Preference number: 6 (lower is better)
Translates to: SSSSREGFFRAAGMI*AATGVTGSLRGTFW
Trigger: CCAAAAAGTGCCTCTCAAGGAACCTGTCACACCCGTTGCAGCCAAAATCATCCCTGCTGCTCGGAAGAAACCTTCTCTGGAGCTGGAGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 72 bp GAATTGGACAGGAAGTTGTTGTACACGGCCTTCATCTaGTCCAGGCTATCAGACACGATGGTGTCCTCCAGG +
Preference number: 6 (lower is better)
Translates to: ELDRKLLYTAFI*SRLSDTMVSSR
Trigger: CCTGGAGGACACCATCGTGTCTGATAGCCTGGAGCAGATGAAGGCCGTGTACAACAACTTCCTGTCCAATTC
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 72 bp CTCTCCTTGGGTTTCTCATCCGGGACTGCTTTCTCCTaGTCCACTTCCTTTTTGATCTCCACCGCCAGCTTC +
Preference number: 6 (lower is better)
Translates to: LSLGFSSGTAFS*STSFLISTASF
Trigger: GAAGCTGGCGGTGGAGATCAAAAAGGAAGTGGACAAGGAGAAAGCAGTCCCGGATGAGAAACCCAAGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 72 bp TCAAAGTCAGCCATCCGGTCACTCGTCTCACTGATGTaGGACTCGCTGTCCATTTCATGGCTGGAGAACTCA +
Preference number: 6 (lower is better)
Translates to: SKSAIRSLVSLM*DSLSISWLENS
Trigger: TGAGTTCTCCAGCCATGAAATGGACAGCGAGTCTCACATCAGTGAGACGAGTGACCGGATGGCTGACTTTGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 72 bp TGCTTTCAAAGTCAGCCATCCGGTCACTCGTCTCACTaGTGTGAGACTCGCTGTCCATTTCATGGCTGGAGA +
Preference number: 6 (lower is better)
Translates to: CFQSQPSGHSSH*CETRCPFHGWR
Trigger: TCTCCAGCCATGAAATGGACAGCGAGTCTCACATCAGTGAGACGAGTGACCGGATGGCTGACTTTGAAAGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 72 bp CATTGTTCTCGGAGGAGGGCTGGTGCAGGTTCAGGTTaGGGTTGGACCAATAGGAATTGGACAGGAAGTTGT +
Preference number: 6 (lower is better)
Translates to: HCSRRRAGAGSG*GWTNRNWTGSC
Trigger: ACAACTTCCTGTCCAATTCCTATTGGTCCAACCTCAACCTGAACCTGCACCAGCCCTCCTCCGAGAACAATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 72 bp CTGACAAGGCATTCTCACGCAGCGGCGAGTTTGACATaGATGATACGACGGCAGATGTCTTTGCCGTTGTCA +
Preference number: 6 (lower is better)
Translates to: LTRHSHAAASLT*MIRRQMSLPLS
Trigger: TGACAACGGCAAAGACATCTGCCGTCGTATCATTCATGTCAAACTCGCCGCTGCGTGAGAATGCCTTGTCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 72 bp TCTTCCCTTTTGTCAAGTCTATGGGCTGGTCATTGTTaGCGTGGTAGAAATAGCGGTCCAGATGCTCCGCCT +
Preference number: 6 (lower is better)
Translates to: SSLLSSLWAGHC*RGRNSGPDAPP
Trigger: AGGCGGAGCATCTGGACCGCTATTTCTACCACGTCAACAATGACCAGCCCATAGACTTGACAAAAGGGAAGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp CGTCAATGTCAGACTTCTCAGAGATGCTGGAAGGAGTaGAGGATTTTGACGTGTGGCTCTCTGTCAAGTTCT +
Preference number: 6 (lower is better)
Translates to: RQCQTSQRCWKE*RILTCGSLSSS
Trigger: AGAACTTGACAGAGAGCCACACGTCAAAATCCTCCACTCCTTCCAGCATCTCTGAGAAGTCTGACATTGACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 72 bp CTCCAATTCAGAAACGAACAGGAGGTGGTCTTCCGGTaGTTTCCCGTGGGTTTTGCTAAGGTGAAGTTTAAC +
Preference number: 6 (lower is better)
Translates to: LQFRNEQEVVFR*FPVGFAKVKFN
Trigger: GTTAAACTTCACCTTAGCAAAACCCACGGGAAATCACCGGAAGACCACCTCCTGTTCGTTTCTGAATTGGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 72 bp TACAAAAGAACACTGGGTGTCCAGTGTCCAAGTTTTTaGGGAACTTTGTTCCACCTGTCCTTCGAAGTTGGT +
Preference number: 6 (lower is better)
Translates to: YKRTLGVQCPSF*GTLFHLSFEVG
Trigger: ACCAACTTCGAAGGACAGGTGGAACAAAGTTCCTCAAAAACTTGGACACTGGACACCCAGTGTTCTTTTGTA
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp TCAGAGATGCTGGAAGGAGTGGAGGATTTTGACGTGTaGCTCTCTGTCAAGTTCTTCAACATATCGGATATA +
Preference number: 6 (lower is better)
Translates to: SEMLEGVEDFDV*LSVKFFNISDI
Trigger: TATATCCGATATGTTGAAGAACTTGACAGAGAGCCACACGTCAAAATCCTCCACTCCTTCCAGCATCTCTGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 72 bp TTACAAAAGAACACTGGGTGTCCAGTGTCCAAGTTTTaGAGGAACTTTGTTCCACCTGTCCTTCGAAGTTGG +
Preference number: 6 (lower is better)
Translates to: LQKNTGCPVSKF*RNFVPPVLRSW
Trigger: CCAACTTCGAAGGACAGGTGGAACAAAGTTCCTCAAAAACTTGGACACTGGACACCCAGTGTTCTTTTGTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CAA 72 bp GGAGGATGTCACCAGTTTTTCAGACGGCGACTTGGTTaGTGCTATTTGATTGTTAATCTGTTCGGTGGACAA +
Preference number: 6 (lower is better)
Translates to: GGCHQFFRRRLG*CYLIVNLFGGQ
Trigger: TTGTCCACCGAACAGATTAACAATCAAATAGCACAAACCAAGTCGCCGTCTGAAAAACTGGTGACATCCTCC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS GCA 72 bp GGATGTCACCAGTTTTTCAGACGGCGACTTGGTTTGTaGTATTTGATTGTTAATCTGTTCGGTGGACAATTT +
Preference number: 6 (lower is better)
Translates to: GCHQFFRRRLGL*YLIVNLFGGQF
Trigger: AAATTGTCCACCGAACAGATTAACAATCAAATAGCACAAACCAAGTCGCCGTCTGAAAAACTGGTGACATCC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS CCA 72 bp TCTCTTCTAGGTCGTTTTCAGTCAAATAGTGGTACTTaGAAGAAATATCATACTTCTCCTCCTCTTCACTGG +
Preference number: 6 (lower is better)
Translates to: SLLGRFQSNSGT*KKYHTSPPLHW
Trigger: CCAGTGAAGAGGAGGAGAAGTATGATATTTCTTCCAAGTACCACTATTTGACTGAAAACGACCTAGAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8
CDS TCA 72 bp ACCAGTTTTTCAGACGGCGACTTGGTTTGTGCTATTTaGTTGTTAATCTGTTCGGTGGACAATTTTGATAAG +
Preference number: 6 (lower is better)
Translates to: TSFSDGDLVCAI*LLICSVDNFDK
Trigger: CTTATCAAAATTGTCCACCGAACAGATTAACAATCAAATAGCACAAACCAAGTCGCCGTCTGAAAAACTGGT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000021641.8