Pregenerated sensors for TSG101 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000014402Ensembl transcript IDs: ENSMUST00000014546.15, ENSMUST00000143413.3, ENSMUST00000209538.2, ENSMUST00000210664.2, ENSMUST00000211076.2
Found 96 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CTGATTGTGCCATCTCTGCTGGGACCAACAGTGGTCACAGGAGGCTaGGAAGGGTACTGTGAGCTTGTTGTGGCAGGGTATGGGCCAGCA | + |
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Preference number: 1 (lower is better) Translates to: LIVPSLLGPTVVTGG*EGYCELVVAGYGPA Trigger: TGCTGGCCCATACCCTGCCACAACAAGCTCACAGTACCCTTCCCAGCCTCCTGTGACCACTGTTGGTCCCAGCAGAGATGGCACAATCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR CCA 90 bp | GCCTGGCATGTAGGAGGTATTTGGTGGCCCTGTTGCTGTGTATGGTaGGTAGGATGCAGAAACAGTAGGCCGGGAGAACACTGGAGGCTC | + |
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Preference number: 1 (lower is better) Translates to: AWHVGGIWWPCCCVW*VGCRNSRPGEHWRL Trigger: GAGCCTCCAGTGTTCTCCCGGCCTACTGTTTCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATACCTCCTACATGCCAGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR CCA 90 bp | CATGCCTGGCATGTAGGAGGTATTTGGTGGCCCTGTTGCTGTGTATaGTGGGTAGGATGCAGAAACAGTAGGCCGGGAGAACACTGGAGG | + |
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Preference number: 1 (lower is better) Translates to: HAWHVGGIWWPCCCV*WVGCRNSRPGEHWR Trigger: CCTCCAGTGTTCTCCCGGCCTACTGTTTCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATACCTCCTACATGCCAGGCATG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR CCA 90 bp | GGGAGGGTATCCAGATGGATATGCAGAGATTCCACTTGGCATGCCTaGCATGTAGGAGGTATTTGGTGGCCCTGTTGCTGTGTATGGTGG | + |
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Preference number: 1 (lower is better) Translates to: GRVSRWICRDSTWHA*HVGGIWWPCCCVWW Trigger: CCACCATACACAGCAACAGGGCCACCAAATACCTCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCATATCCATCTGGATACCCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR CCA 90 bp | ACTGGGGTTGGGAGGGTATCCAGATGGATATGCAGAGATTCCACTTaGCATGCCTGGCATGTAGGAGGTATTTGGTGGCCCTGTTGCTGT | + |
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Preference number: 1 (lower is better) Translates to: TGVGRVSRWICRDST*HAWHVGGIWWPCCC Trigger: ACAGCAACAGGGCCACCAAATACCTCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCATATCCATCTGGATACCCTCCCAACCCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR CCA 90 bp | GTAAGGACAGCCAGGATAACCACTGGGGTTGGGAGGGTATCCAGATaGATATGCAGAGATTCCACTTGGCATGCCTGGCATGTAGGAGGT | + |
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Preference number: 1 (lower is better) Translates to: VRTARITTGVGRVSR*ICRDSTWHAWHVGG Trigger: ACCTCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCATATCCATCTGGATACCCTCCCAACCCCAGTGGTTATCCTGGCTGTCCTTAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR GCA 90 bp | GGTTGGGAGGGTATCCAGATGGATATGCAGAGATTCCACTTGGCATaGCTGGCATGTAGGAGGTATTTGGTGGCCCTGTTGCTGTGTATG | + |
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Preference number: 1 (lower is better) Translates to: GWEGIQMDMQRFHLA*LACRRYLVALLLCM Trigger: CATACACAGCAACAGGGCCACCAAATACCTCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCATATCCATCTGGATACCCTCCCAACC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR GCA 90 bp | ACAGCCAGGATAACCACTGGGGTTGGGAGGGTATCCAGATGGATATaGAGAGATTCCACTTGGCATGCCTGGCATGTAGGAGGTATTTGG | + |
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Preference number: 1 (lower is better) Translates to: TARITTGVGRVSRWI*RDSTWHAWHVGGIW Trigger: CCAAATACCTCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCATATCCATCTGGATACCCTCCCAACCCCAGTGGTTATCCTGGCTGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR CCA 90 bp | ATATGCAGAGATTCCACTTGGCATGCCTGGCATGTAGGAGGTATTTaGTGGCCCTGTTGCTGTGTATGGTGGGTAGGATGCAGAAACAGT | + |
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Preference number: 1 (lower is better) Translates to: ICRDSTWHAWHVGGI*WPCCCVWWVGCRNS Trigger: ACTGTTTCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATACCTCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCATAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR CCA 90 bp | TGTGTATGGTGGGTAGGATGCAGAAACAGTAGGCCGGGAGAACACTaGAGGCTCCTCTCCAAATATCACAATCATGATTTGAATAAGCTC | + |
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Preference number: 1 (lower is better) Translates to: CVWWVGCRNSRPGEH*RLLSKYHNHDLNKL Trigger: GAGCTTATTCAAATCATGATTGTGATATTTGGAGAGGAGCCTCCAGTGTTCTCCCGGCCTACTGTTTCTGCATCCTACCCACCATACACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR CAA 90 bp | CACTGGGGTTGGGAGGGTATCCAGATGGATATGCAGAGATTCCACTaGGCATGCCTGGCATGTAGGAGGTATTTGGTGGCCCTGTTGCTG | + |
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Preference number: 2 (lower is better) Translates to: HWGWEGIQMDMQRFH*ACLACRRYLVALLL Trigger: CAGCAACAGGGCCACCAAATACCTCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCATATCCATCTGGATACCCTCCCAACCCCAGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCTCACTGATTGTGCCATCTCTGCTGGGACCAACAGTGGTCACAGGAGGCTGCAGAGATTCCACTTaGCATGCCTGGCATGTAGGA | + |
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Preference number: 2 (lower is better) Translates to: VSSLIVPSLLGPTVVTGGCRDST*HAWHVG Trigger: TCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCA...GCCTCCTGTGACCACTGTTGGTCCCAGCAGAGATGGCACAATCAGTGAGGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR-3UTR TCA 90 bp | ATAGTGTCCTCACTGATTGTGCCATCTCTGCTGGGACCAACAGTGGTCACAGGACTGGGAAGGGTACTGTaGGCTTGTTGTGGCAGGGTA | + |
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Preference number: 2 (lower is better) Translates to: IVSSLIVPSLLGPTVVTGLGRVL*ACCGRV Trigger: TACCCTGCCACAACAAGCTCACAGTACCCTTCCCAG...TCCTGTGACCACTGTTGGTCCCAGCAGAGATGGCACAATCAGTGAGGACACTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR-3UTR CCA 90 bp | TGCAGAGATTCCACTTGGCATGCCTGGCATGTAGGAGGTATTTGGTGGCCCTGTAGGCCGGGAGAACACTaGAGGCTCCTCTCCAAATAT | + |
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Preference number: 2 (lower is better) Translates to: CRDSTWHAWHVGGIWWPCRPGEH*RLLSKY Trigger: ATATTTGGAGAGGAGCCTCCAGTGTTCTCCCGGCCT...ACAGGGCCACCAAATACCTCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCTCACTGATTGTGCCATCTCTGCTGGGACCAACAGTGGTCACAGGAGGCGGGAGGGTATCCAGATaGATATGCAGAGATTCCACT | + |
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Preference number: 2 (lower is better) Translates to: VSSLIVPSLLGPTVVTGGGRVSR*ICRDST Trigger: AGTGGAATCTCTGCATATCCATCTGGATACCCTCCC...GCCTCCTGTGACCACTGTTGGTCCCAGCAGAGATGGCACAATCAGTGAGGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTCCTCACTGATTGTGCCATCTCTGCTGGGACCAACAGTGGTCACAGGAGGCTGTTGCTGTGTATGGTaGGTAGGATGCAGAAACAGT | + |
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Preference number: 2 (lower is better) Translates to: VSSLIVPSLLGPTVVTGGCCCVW*VGCRNS Trigger: ACTGTTTCTGCATCCTACCCACCATACACAGCAACA...GCCTCCTGTGACCACTGTTGGTCCCAGCAGAGATGGCACAATCAGTGAGGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR CAA 90 bp | GATATGCAGAGATTCCACTTGGCATGCCTGGCATGTAGGAGGTATTaGGTGGCCCTGTTGCTGTGTATGGTGGGTAGGATGCAGAAACAG | + |
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Preference number: 2 (lower is better) Translates to: DMQRFHLACLACRRY*VALLLCMVGRMQKQ Trigger: CTGTTTCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATACCTCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCATATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTCCTCACTGATTGTGCCATCTCTGCTGGGACCAACAGTGGTCACAGGAGGCGTATCCAGATGGATATaGAGAGATTCCACTTGGCAT | + |
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Preference number: 2 (lower is better) Translates to: VSSLIVPSLLGPTVVTGGVSRWI*RDSTWH Trigger: ATGCCAAGTGGAATCTCTGCATATCCATCTGGATAC...GCCTCCTGTGACCACTGTTGGTCCCAGCAGAGATGGCACAATCAGTGAGGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR-3UTR GCA 90 bp | ACTGATTGTGCCATCTCTGCTGGGACCAACAGTGGTCACAGGAGGCTGGGAAGGGTAGATTTTCCCATTTaGATCCACATGCTTTCCTGT | + |
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Preference number: 2 (lower is better) Translates to: TDCAISAGTNSGHRRLGRVDFPI*IHMLSC Trigger: ACAGGAAAGCATGTGGATGCAAATGGGAAAATCTAC...CCTTCCCAGCCTCCTGTGACCACTGTTGGTCCCAGCAGAGATGGCACAATCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR-3UTR CCA 90 bp | ACAGCCAGGATAACCACTGGGGTTGGGAGGGTATCCAGATGGATATGCAGAGATCATGTAGGAGGTATTTaGTGGCCCTGTTGCTGTGTA | + |
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Preference number: 2 (lower is better) Translates to: TARITTGVGRVSRWICRDHVGGI*WPCCCV Trigger: TACACAGCAACAGGGCCACCAAATACCTCCTACATG...ATCTCTGCATATCCATCTGGATACCCTCCCAACCCCAGTGGTTATCCTGGCTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR-3UTR GCA 90 bp | ATGCAGAGATTCCACTTGGCATGCCTGGCATGTAGGAGGTATTTGGTGGCCCTGCCATTTGCATCCACATaGTTTCCTGTTTTAATAGTC | + |
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Preference number: 2 (lower is better) Translates to: MQRFHLACLACRRYLVALPFAST*FPVLIV Trigger: GACTATTAAAACAGGAAAGCATGTGGATGCAAATGG...CAGGGCCACCAAATACCTCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR-3UTR TCA 90 bp | GTAGGAGGTATTTGGTGGCCCTGTTGCTGTGTATGGTGGGTAGGATGCAGAAACATCACAATCATGATTTaGATAAGCTCCAGCAACTCT | + |
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Preference number: 2 (lower is better) Translates to: VGGIWWPCCCVWWVGCRNITIMI*ISSSNS Trigger: AGAGTTGCTGGAGCTTATTCAAATCATGATTGTGAT...GTTTCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATACCTCCTAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR-3UTR TCA 90 bp | TGTCTATGTACATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATATACATTTCTCTGCATaGCATTCTACACTAAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: CLCTYECSGHRDQKTILDIHFSA*HSTLKG Trigger: TCCCTTTAGTGTAGAATGTCATGCAGAGAAATGTAT...ATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATGTACATAGACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| 3UTR CCA 72 bp | GTAGGAGGTATTTGGTGGCCCTGTTGCTGTGTATGGTaGGTAGGATGCAGAAACAGTAGGCCGGGAGAACAC | + |
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Preference number: 3 (lower is better) Translates to: VGGIWWPCCCVW*VGCRNSRPGEH Trigger: GTGTTCTCCCGGCCTACTGTTTCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATACCTCCTAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR CCA 72 bp | GATTCCACTTGGCATGCCTGGCATGTAGGAGGTATTTaGTGGCCCTGTTGCTGTGTATGGTGGGTAGGATGC | + |
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Preference number: 3 (lower is better) Translates to: DSTWHAWHVGGI*WPCCCVWWVGC Trigger: GCATCCTACCCACCATACACAGCAACAGGGCCACCAAATACCTCCTACATGCCAGGCATGCCAAGTGGAATC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR CCA 72 bp | GGGAGGGTATCCAGATGGATATGCAGAGATTCCACTTaGCATGCCTGGCATGTAGGAGGTATTTGGTGGCCC | + |
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Preference number: 3 (lower is better) Translates to: GRVSRWICRDST*HAWHVGGIWWP Trigger: GGGCCACCAAATACCTCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCATATCCATCTGGATACCCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR GCA 72 bp | CATGCCTGGCATGTAGGAGGTATTTGGTGGCCCTGTTaGTGTGTATGGTGGGTAGGATGCAGAAACAGTAGG | + |
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Preference number: 3 (lower is better) Translates to: HAWHVGGIWWPC*CVWWVGCRNSR Trigger: CCTACTGTTTCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATACCTCCTACATGCCAGGCATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR CCA 72 bp | CATGTAGGAGGTATTTGGTGGCCCTGTTGCTGTGTATaGTGGGTAGGATGCAGAAACAGTAGGCCGGGAGAA | + |
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Preference number: 3 (lower is better) Translates to: HVGGIWWPCCCV*WVGCRNSRPGE Trigger: TTCTCCCGGCCTACTGTTTCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATACCTCCTACATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR GCA 72 bp | ATAACCACTGGGGTTGGGAGGGTATCCAGATGGATATaGAGAGATTCCACTTGGCATGCCTGGCATGTAGGA | + |
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Preference number: 3 (lower is better) Translates to: ITTGVGRVSRWI*RDSTWHAWHVG Trigger: TCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCATATCCATCTGGATACCCTCCCAACCCCAGTGGTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR CCA 72 bp | TCCAGATGGATATGCAGAGATTCCACTTGGCATGCCTaGCATGTAGGAGGTATTTGGTGGCCCTGTTGCTGT | + |
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Preference number: 3 (lower is better) Translates to: SRWICRDSTWHA*HVGGIWWPCCC Trigger: ACAGCAACAGGGCCACCAAATACCTCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCATATCCATCTGGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR-3UTR CAA 90 bp | ACAGCCAGGATAACCACTGGGGTTGGGAGGGTATCCAGATGGATATGCAGAGATGGTAGATTTTCCCATTaGCATCCACATGCTTTCCTG | + |
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Preference number: 3 (lower is better) Translates to: TARITTGVGRVSRWICRDGRFSH*HPHAFL Trigger: CAGGAAAGCATGTGGATGCAAATGGGAAAATCTACC...ATCTCTGCATATCCATCTGGATACCCTCCCAACCCCAGTGGTTATCCTGGCTGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR CCA 72 bp | TGGGTAGGATGCAGAAACAGTAGGCCGGGAGAACACTaGAGGCTCCTCTCCAAATATCACAATCATGATTTG | + |
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Preference number: 3 (lower is better) Translates to: WVGCRNSRPGEH*RLLSKYHNHDL Trigger: CAAATCATGATTGTGATATTTGGAGAGGAGCCTCCAGTGTTCTCCCGGCCTACTGTTTCTGCATCCTACCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| 3UTR-3UTR CAA 90 bp | CATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATCCCCAAAGCTGAAGCCAGGCTTCTTTaGTGCATCTTATCTCAAGTC | + |
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Preference number: 3 (lower is better) Translates to: HMSVVATETRRQYWIPKAEARLL*CILSQV Trigger: GACTTGAGATAAGATGCACAAAAGAAGCCTGGCTTC...AGCTTTGGGGATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CCA 90 bp | GCCCAGTCAGTCCCAGCACAGCACAGACGCTTACAGAGGGTAGAAAGTGCATTATGTTGTGGCAGGGTATaGGCCAGCAGGTGGGTAAGG | + |
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Preference number: 4 (lower is better) Translates to: AQSVPAQHRRLQRVESALCCGRV*ASRWVR Trigger: CCTTACCCACCTGCTGGCCCATACCCTGCCACAACA...TAATGCACTTTCTACCCTCTGTAAGCGTCTGTGCTGTGCTGGGACTGACTGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| 3UTR CAA 72 bp | TGGGAGGGTATCCAGATGGATATGCAGAGATTCCACTaGGCATGCCTGGCATGTAGGAGGTATTTGGTGGCC | + |
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Preference number: 4 (lower is better) Translates to: WEGIQMDMQRFH*ACLACRRYLVA Trigger: GGCCACCAAATACCTCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCATATCCATCTGGATACCCTCCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| CDS-3UTR CCA 90 bp | GCCCAGTCAGTCCCAGCACAGCACAGACGCTTACAGAGGGTAGAAAGTGCATTATGCAGAGATTCCACTTaGCATGCCTGGCATGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: AQSVPAQHRRLQRVESALCRDST*HAWHVG Trigger: TCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCA...TAATGCACTTTCTACCCTCTGTAAGCGTCTGTGCTGTGCTGGGACTGACTGGGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR TCA 90 bp | GTGTCCTCACTGATTGTGCCATCTCTGCTGGGACCAACAGTGGTCACAGGAGGCATGACATTGACAGTTTaGCGGACGGTTAGATCTCTA | + |
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Preference number: 4 (lower is better) Translates to: VSSLIVPSLLGPTVVTGGMTLTV*RTVRSL Trigger: TAGAGATCTAACCGTCCGTCAAACTGTCAATGTCAT...GCCTCCTGTGACCACTGTTGGTCCCAGCAGAGATGGCACAATCAGTGAGGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| CDS-3UTR CCA 90 bp | GCCCAGTCAGTCCCAGCACAGCACAGACGCTTACAGAGGGTAGAAAGTGCATTACATGTAGGAGGTATTTaGTGGCCCTGTTGCTGTGTA | + |
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Preference number: 4 (lower is better) Translates to: AQSVPAQHRRLQRVESALHVGGI*WPCCCV Trigger: TACACAGCAACAGGGCCACCAAATACCTCCTACATG...TAATGCACTTTCTACCCTCTGTAAGCGTCTGTGCTGTGCTGGGACTGACTGGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CCA 90 bp | GTAGGAGGTATTTGGTGGCCCTGTTGCTGTGTATGGTGGGTAGGATGCAGAAACGGCTCGATAACGCACTaGGATTGTACCAGTGAGGTT | + |
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Preference number: 4 (lower is better) Translates to: VGGIWWPCCCVWWVGCRNGSITH*DCTSEV Trigger: AACCTCACTGGTACAATCCCAGTGCGTTATCGAGCC...GTTTCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATACCTCCTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| CDS-3UTR TCA 90 bp | GCCCAGTCAGTCCCAGCACAGCACAGACGCTTACAGAGGGTAGAAAGTGCATTAATGACATTGACAGTTTaGCGGACGGTTAGATCTCTA | + |
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Preference number: 4 (lower is better) Translates to: AQSVPAQHRRLQRVESALMTLTV*RTVRSL Trigger: TAGAGATCTAACCGTCCGTCAAACTGTCAATGTCAT...TAATGCACTTTCTACCCTCTGTAAGCGTCTGTGCTGTGCTGGGACTGACTGGGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CCA 90 bp | AAGAAGAAGAAAAGAATGCTTTACGGAGAGGTCGGTCTCCAGCTGACAGCACATAGGCCGGGAGAACACTaGAGGCTCCTCTCCAAATAT | + |
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Preference number: 4 (lower is better) Translates to: KKKKRMLYGEVGLQLTAHRPGEH*RLLSKY Trigger: ATATTTGGAGAGGAGCCTCCAGTGTTCTCCCGGCCT...ATGTGCTGTCAGCTGGAGACCGACCTCTCCGTAAAGCATTCTTTTCTTCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CCA 90 bp | TCAGTCCCAGCACAGCACAGACGCTTACAGAGGGTAGAAAGTGCATTAATAAAAGTATGGGCCAGCAGGTaGGTAAGGACAGCCAGGATA | + |
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Preference number: 4 (lower is better) Translates to: SVPAQHRRLQRVESALIKVWASR*VRTARI Trigger: TATCCTGGCTGTCCTTACCCACCTGCTGGCCCATAC...TTTTATTAATGCACTTTCTACCCTCTGTAAGCGTCTGTGCTGTGCTGGGACTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CCA 90 bp | TCAGTCCCAGCACAGCACAGACGCTTACAGAGGGTAGAAAGTGCATTAATAAAAACTGTGAGCTTGTTGTaGCAGGGTATGGGCCAGCAG | + |
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Preference number: 4 (lower is better) Translates to: SVPAQHRRLQRVESALIKTVSLL*QGMGQQ Trigger: CTGCTGGCCCATACCCTGCCACAACAAGCTCACAGT...TTTTATTAATGCACTTTCTACCCTCTGTAAGCGTCTGTGCTGTGCTGGGACTGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CCA 90 bp | CATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATCCCCAAAGCTTTGTGCCATCTCTGCTaGGACCAACAGTGGTCACAG | + |
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Preference number: 4 (lower is better) Translates to: HMSVVATETRRQYWIPKALCHLC*DQQWSQ Trigger: CTGTGACCACTGTTGGTCCCAGCAGAGATGGCACAA...AGCTTTGGGGATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CCA 90 bp | AAGAAGAAGAAAAGAATGCTTTACGGAGAGGTCGGTCTCCAGCTGACAGCACATGCATTAAGCTCTGCCTaGGCACCATCCATTTCCTCC | + |
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Preference number: 4 (lower is better) Translates to: KKKKRMLYGEVGLQLTAHALSSA*APSISS Trigger: GGAGGAAATGGATGGTGCCCAGGCAGAGCTTAATGC...ATGTGCTGTCAGCTGGAGACCGACCTCTCCGTAAAGCATTCTTTTCTTCTTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR GCA 90 bp | GTCAGTCCCAGCACAGCACAGACGCTTACAGAGGGTAGAAAGTGCATTAATAAAATTTGGTGGCCCTGTTaGTGTGTATGGTGGGTAGGA | + |
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Preference number: 4 (lower is better) Translates to: VSPSTAQTLTEGRKCINKIWWPC*CVWWVG Trigger: TCCTACCCACCATACACAGCAACAGGGCCACCAAAT...TTTATTAATGCACTTTCTACCCTCTGTAAGCGTCTGTGCTGTGCTGGGACTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CCA 90 bp | AAGAAGAAGAAAAGAATGCTTTACGGAGAGGTCGGTCTCCAGCTGACAGCACATTCCACTTGGCATGCCTaGCATGTAGGAGGTATTTGG | + |
|
Preference number: 4 (lower is better) Translates to: KKKKRMLYGEVGLQLTAHSTWHA*HVGGIW Trigger: CCAAATACCTCCTACATGCCAGGCATGCCAAGTGGA...ATGTGCTGTCAGCTGGAGACCGACCTCTCCGTAAAGCATTCTTTTCTTCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CCA 90 bp | CATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATCCCCAAAGCTGATAACCACTGGGGTTaGGAGGGTATCCAGATGGAT | + |
|
Preference number: 4 (lower is better) Translates to: HMSVVATETRRQYWIPKADNHWG*EGIQMD Trigger: ATCCATCTGGATACCCTCCCAACCCCAGTGGTTATC...AGCTTTGGGGATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR TCA 90 bp | TGTCTATGTACATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATCTGGGAAGGGTACTGTaGGCTTGTTGTGGCAGGGTA | + |
|
Preference number: 4 (lower is better) Translates to: CLCTYECSGHRDQKTILDLGRVL*ACCGRV Trigger: TACCCTGCCACAACAAGCTCACAGTACCCTTCCCAG...ATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATGTACATAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR TCA 90 bp | CATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATCCCCAAAGCTCTTGATCTAAGCGGGTaGCCATCTCTTCCAGTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: HMSVVATETRRQYWIPKALDLSG*PSLPVS Trigger: AGAAACTGGAAGAGATGGTCACCCGCTTAGATCAAG...AGCTTTGGGGATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CCA 90 bp | CATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATCCCCAAAGCTACCTCGATAACGCACTaGGATTGTACCAGTGAGGTT | + |
|
Preference number: 4 (lower is better) Translates to: HMSVVATETRRQYWIPKATSITH*DCTSEV Trigger: AACCTCACTGGTACAATCCCAGTGCGTTATCGAGGT...AGCTTTGGGGATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CCA 90 bp | GTCAGTCCCAGCACAGCACAGACGCTTACAGAGGGTAGAAAGTGCATTAATAAAGGGAGGGTATCCAGATaGATATGCAGAGATTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VSPSTAQTLTEGRKCINKGRVSR*ICRDST Trigger: AGTGGAATCTCTGCATATCCATCTGGATACCCTCCC...TTTATTAATGCACTTTCTACCCTCTGTAAGCGTCTGTGCTGTGCTGGGACTGAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR TCA 90 bp | TCAGTCCCAGCACAGCACAGACGCTTACAGAGGGTAGAAAGTGCATTAATAAAATTTGTCACTGACTGCTaGGATGAGAGATGCACGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SVPAQHRRLQRVESALIKFVTDC*DERCTD Trigger: ATCCGTGCATCTCTCATCTCAGCAGTCAGTGACAAA...TTTTATTAATGCACTTTCTACCCTCTGTAAGCGTCTGTGCTGTGCTGGGACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR GCA 90 bp | TCAGTCCCAGCACAGCACAGACGCTTACAGAGGGTAGAAAGTGCATTAATAAAAAGATTCCACTTGGCATaGCTGGCATGTAGGAGGTAT | + |
|
Preference number: 4 (lower is better) Translates to: SVPAQHRRLQRVESALIKRFHLA*LACRRY Trigger: ATACCTCCTACATGCCAGGCATGCCAAGTGGAATCT...TTTTATTAATGCACTTTCTACCCTCTGTAAGCGTCTGTGCTGTGCTGGGACTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR GCA 90 bp | TCAGTCCCAGCACAGCACAGACGCTTACAGAGGGTAGAAAGTGCATTAATAAAAGTCTTCCTTGCCTTTTaGATTAGTGCCCTTAGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: SVPAQHRRLQRVESALIKVFLAF*ISALSW Trigger: CCAGCTAAGGGCACTAATGCAAAAGGCAAGGAAGAC...TTTTATTAATGCACTTTCTACCCTCTGTAAGCGTCTGTGCTGTGCTGGGACTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CCA 90 bp | TGCAGAGATTCCACTTGGCATGCCTGGCATGTAGGAGGTATTTGGTGGCCCTGTCTCTATATTTGTACTTaGACATCATCTTCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: CRDSTWHAWHVGGIWWPCLYICT*TSSSSA Trigger: AGCTGAAGAAGATGATGTCCAAGTACAAATATAGAG...ACAGGGCCACCAAATACCTCCTACATGCCAGGCATGCCAAGTGGAATCTCTGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| CDS-3UTR GCA 90 bp | AAGAAGAAGAAAAGAATGCTTTACGGAGAGGTCGGTCTCCAGCTGACAGCACATGTATCCAGATGGATATaGAGAGATTCCACTTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KKKKRMLYGEVGLQLTAHVSRWI*RDSTWH Trigger: ATGCCAAGTGGAATCTCTGCATATCCATCTGGATAC...ATGTGCTGTCAGCTGGAGACCGACCTCTCCGTAAAGCATTCTTTTCTTCTTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CCA 90 bp | TGTCTATGTACATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATATTAGTGCCCTTAGCTaGAACTGTTTACGGGACAGG | + |
|
Preference number: 4 (lower is better) Translates to: CLCTYECSGHRDQKTILDISALS*NCLRDR Trigger: CCTGTCCCGTAAACAGTTCCAGCTAAGGGCACTAAT...ATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATGTACATAGACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR TCA 90 bp | CATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATCCCCAAAGCTATCACAATCATGATTTaGATAAGCTCCAGCAACTCT | + |
|
Preference number: 4 (lower is better) Translates to: HMSVVATETRRQYWIPKAITIMI*ISSSNS Trigger: AGAGTTGCTGGAGCTTATTCAAATCATGATTGTGAT...AGCTTTGGGGATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
||
| CDS-3UTR GCA 90 bp | CATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATCCCCAAAGCTCCATTTGCATCCACATaGTTTCCTGTTTTAATAGTC | + |
|
Preference number: 4 (lower is better) Translates to: HMSVVATETRRQYWIPKAPFAST*FPVLIV Trigger: GACTATTAAAACAGGAAAGCATGTGGATGCAAATGG...AGCTTTGGGGATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
||
| CDS-3UTR CCA 90 bp | TGTCTATGTACATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATTGTTGCTGTGTATGGTaGGTAGGATGCAGAAACAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLCTYECSGHRDQKTILDCCCVW*VGCRNS Trigger: ACTGTTTCTGCATCCTACCCACCATACACAGCAACA...ATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATGTACATAGACA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR GCA 90 bp | TGTCTATGTACATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATGTAGATTTTCCCATTTaGATCCACATGCTTTCCTGT | + |
|
Preference number: 4 (lower is better) Translates to: CLCTYECSGHRDQKTILDVDFPI*IHMLSC Trigger: ACAGGAAAGCATGTGGATGCAAATGGGAAAATCTAC...ATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATGTACATAGACA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CCA 90 bp | TCAGTCCCAGCACAGCACAGACGCTTACAGAGGGTAGAAAGTGCATTAATAAAACTCTATATTTGTACTTaGACATCATCTTCTTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: SVPAQHRRLQRVESALIKLYICT*TSSSSA Trigger: AGCTGAAGAAGATGATGTCCAAGTACAAATATAGAG...TTTTATTAATGCACTTTCTACCCTCTGTAAGCGTCTGTGCTGTGCTGGGACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CCA 90 bp | TGTCTATGTACATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATAATCTGTTTATACAGTaGGGCTGTGGGAATGATAAC | + |
|
Preference number: 4 (lower is better) Translates to: CLCTYECSGHRDQKTILDNLFIQ*GCGNDN Trigger: GTTATCATTCCCACAGCCCCACTGTATAAACAGATT...ATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATGTACATAGACA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS CCA 90 bp | GCCATCTCTGCTGGGACTATTTGGTGGCCCTGTTGCTGTGTATGGTaGGTAGGATGCAGAAACAGTAGGCCGGGAGAACACTGGAGGCTC | + |
|
Preference number: 5 (lower is better) Translates to: AISAGTIWWPCCCVW*VGCRNSRPGEHWRL Trigger: GAGCCTCCAGTGTTCTCCCGGCCTACTGTTTCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATAGTCCCAGCAGAGATGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209538.2 |
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| CDS CCA 90 bp | TGTGCCATCTCTGCTGGGACTATTTGGTGGCCCTGTTGCTGTGTATaGTGGGTAGGATGCAGAAACAGTAGGCCGGGAGAACACTGGAGG | + |
|
Preference number: 5 (lower is better) Translates to: CAISAGTIWWPCCCV*WVGCRNSRPGEHWR Trigger: CCTCCAGTGTTCTCCCGGCCTACTGTTTCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATAGTCCCAGCAGAGATGGCACA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209538.2 |
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| CDS CCA 90 bp | CTAAGGCCCGCAGTCTTCCTTGCCTTTTGCATTAGTGCCCTTAGCTaGAACTGTTTACGGGACAGGAGGCGGACGTGTTTCAGGAACACA | + |
|
Preference number: 5 (lower is better) Translates to: LRPAVFLAFCISALS*NCLRDRRRTCFRNT Trigger: TGTGTTCCTGAAACACGTCCGCCTCCTGTCCCGTAAACAGTTCCAGCTAAGGGCACTAATGCAAAAGGCAAGGAAGACTGCGGGCCTTAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014546.15 ENSMUST00000209538.2 |
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| CDS CCA 90 bp | GATAGTGTCCTCACTGATTGTGCCATCTCTGCTGGGACTATTTGGTaGCCCTGTTGCTGTGTATGGTGGGTAGGATGCAGAAACAGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: DSVLTDCAISAGTIW*PCCCVWWVGCRNSR Trigger: CCTACTGTTTCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATAGTCCCAGCAGAGATGGCACAATCAGTGAGGACACTATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209538.2 |
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| CDS CCA 90 bp | ACGGATAGTGTCCTCACTGATTGTGCCATCTCTGCTGGGACTATTTaGTGGCCCTGTTGCTGTGTATGGTGGGTAGGATGCAGAAACAGT | + |
|
Preference number: 5 (lower is better) Translates to: TDSVLTDCAISAGTI*WPCCCVWWVGCRNS Trigger: ACTGTTTCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATAGTCCCAGCAGAGATGGCACAATCAGTGAGGACACTATCCGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209538.2 |
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| CDS-3UTR CAA 90 bp | CAGCAGGTGGGTAAGGACAGCCAGGATAACCACTGGGGTTGGGAGGGTATCCAGACAGGTTTGAGATCTTaGTACATAGCGATGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: QQVGKDSQDNHWGWEGIQTGLRS*YIAMTL Trigger: CAATGTCATCGCTATGTACAAAGATCTCAAACCTGT...CTGGATACCCTCCCAACCCCAGTGGTTATCCTGGCTGTCCTTACCCACCTGCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| CDS-3UTR CAA 90 bp | CATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATCCCCAAAGCTGGCCCGCAGTCTTCCTaGCCTTTTGCATTAGTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: HMSVVATETRRQYWIPKAGPQSS*PFALVP Trigger: GGGCACTAATGCAAAAGGCAAGGAAGACTGCGGGCC...AGCTTTGGGGATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS TCA 90 bp | ATCCATTTCCTCCTTCATCCGCCATCTCAGTTTGTCACTGACTGCTaGGATGAGAGATGCACGGATAGTGTCCTCACTGATTGTGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: IHFLLHPPSQFVTDC*DERCTDSVLTDCAI Trigger: GATGGCACAATCAGTGAGGACACTATCCGTGCATCTCTCATCTCAGCAGTCAGTGACAAACTGAGATGGCGGATGAAGGAGGAAATGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014546.15 ENSMUST00000209538.2 |
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| CDS-3UTR CAA 90 bp | GTCAGTCCCAGCACAGCACAGACGCTTACAGAGGGTAGAAAGTGCATTAATAAAATGCAGAGATTCCACTaGGCATGCCTGGCATGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: VSPSTAQTLTEGRKCINKMQRFH*ACLACR Trigger: CCTACATGCCAGGCATGCCAAGTGGAATCTCTGCAT...TTTATTAATGCACTTTCTACCCTCTGTAAGCGTCTGTGCTGTGCTGGGACTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CAA 90 bp | GCCCAGTCAGTCCCAGCACAGCACAGACGCTTACAGAGGGTAGAAAGTGCATTAACAGGTTTGAGATCTTaGTACATAGCGATGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: AQSVPAQHRRLQRVESALTGLRS*YIAMTL Trigger: CAATGTCATCGCTATGTACAAAGATCTCAAACCTGT...TAATGCACTTTCTACCCTCTGTAAGCGTCTGTGCTGTGCTGGGACTGACTGGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CAA 90 bp | AAGAAGAAGAAAAGAATGCTTTACGGAGAGGTCGGTCTCCAGCTGACAGCACATATCCGCCATCTCAGTTaGTCACTGACTGCTGAGATG | + |
|
Preference number: 5 (lower is better) Translates to: KKKKRMLYGEVGLQLTAHIRHLS*SLTAEM Trigger: CATCTCAGCAGTCAGTGACAAACTGAGATGGCGGAT...ATGTGCTGTCAGCTGGAGACCGACCTCTCCGTAAAGCATTCTTTTCTTCTTCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS CCA 90 bp | TTTTTCAGATCTTCCTCTGTTCGTTTCAAGGCATTAAGCTCTGCCTaGGCACCATCCATTTCCTCCTTCATCCGCCATCTCAGTTTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FFRSSSVRFKALSSA*APSISSFIRHLSLS Trigger: TGACAAACTGAGATGGCGGATGAAGGAGGAAATGGATGGTGCCCAGGCAGAGCTTAATGCCTTGAAACGAACAGAGGAAGATCTGAAAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000014546.15 ENSMUST00000209538.2 |
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| CDS-3UTR CAA 90 bp | GTAGGAGGTATTTGGTGGCCCTGTTGCTGTGTATGGTGGGTAGGATGCAGAAACGAATCCAATACAGGTTaGAGATCTTTGTACATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: VGGIWWPCCCVWWVGCRNESNTG*RSLYIA Trigger: CGCTATGTACAAAGATCTCAAACCTGTATTGGATTC...GTTTCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATACCTCCTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000211076.2 |
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| CDS-3UTR CAA 90 bp | TGTCTATGTACATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATAAGGGTACTGTGAGCTaGTTGTGGCAGGGTATGGGC | + |
|
Preference number: 5 (lower is better) Translates to: CLCTYECSGHRDQKTILDKGTVS*LWQGMG Trigger: GCCCATACCCTGCCACAACAAGCTCACAGTACCCTT...ATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATGTACATAGACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CAA 90 bp | TCAGTCCCAGCACAGCACAGACGCTTACAGAGGGTAGAAAGTGCATTAATAAAAGGTAGATTTTCCCATTaGCATCCACATGCTTTCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVPAQHRRLQRVESALIKGRFSH*HPHAFL Trigger: CAGGAAAGCATGTGGATGCAAATGGGAAAATCTACC...TTTTATTAATGCACTTTCTACCCTCTGTAAGCGTCTGTGCTGTGCTGGGACTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS-3UTR CAA 90 bp | CATATGAGTGTAGTGGCCACAGAGACCAGAAGACAATATTGGATCCCCAAAGCTGAATCCAATACAGGTTaGAGATCTTTGTACATAGCG | + |
|
Preference number: 5 (lower is better) Translates to: HMSVVATETRRQYWIPKAESNTG*RSLYIA Trigger: CGCTATGTACAAAGATCTCAAACCTGTATTGGATTC...AGCTTTGGGGATCCAATATTGTCTTCTGGTCTCTGTGGCCACTACACTCATATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS TCA 90 bp | AATACAGGTTTGAGATCTTTGTACATAGCGATGACATTGACAGTTTaGCGGACGGTTAGATCTCTATATTTGTACTTGGACATCATCTTC | + |
|
Preference number: 5 (lower is better) Translates to: NTGLRSLYIAMTLTV*RTVRSLYLYLDIIF Trigger: GAAGATGATGTCCAAGTACAAATATAGAGATCTAACCGTCCGTCAAACTGTCAATGTCATCGCTATGTACAAAGATCTCAAACCTGTATT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014546.15 ENSMUST00000143413.3 ENSMUST00000210664.2 ENSMUST00000211076.2 |
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| CDS TCA 72 bp | GGAGGCGGACGTGTTTCAGGAACACATCCAGGTCTATaGCTCCCCGCCGCAAAGCTTCTCCAAGGTAAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: GGGRVSGTHPGL*LPAAKLLQGKR Trigger: TCTTTTACCTTGGAGAAGCTTTGCGGCGGGGAGTCATAGACCTGGATGTGTTCCTGAAACACGTCCGCCTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000014546.15 ENSMUST00000209538.2 |
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| CDS CCA 72 bp | GTCCTCACTGATTGTGCCATCTCTGCTGGGACTATTTaGTGGCCCTGTTGCTGTGTATGGTGGGTAGGATGC | + |
|
Preference number: 6 (lower is better) Translates to: VLTDCAISAGTI*WPCCCVWWVGC Trigger: GCATCCTACCCACCATACACAGCAACAGGGCCACCAAATAGTCCCAGCAGAGATGGCACAATCAGTGAGGAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209538.2 |
||
| CDS GCA 72 bp | TGTGCCATCTCTGCTGGGACTATTTGGTGGCCCTGTTaGTGTGTATGGTGGGTAGGATGCAGAAACAGTAGG | + |
|
Preference number: 6 (lower is better) Translates to: CAISAGTIWWPC*CVWWVGCRNSR Trigger: CCTACTGTTTCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATAGTCCCAGCAGAGATGGCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209538.2 |
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| CDS CCA 72 bp | GCAGTCTTCCTTGCCTTTTGCATTAGTGCCCTTAGCTaGAACTGTTTACGGGACAGGAGGCGGACGTGTTTC | + |
|
Preference number: 6 (lower is better) Translates to: AVFLAFCISALS*NCLRDRRRTCF Trigger: GAAACACGTCCGCCTCCTGTCCCGTAAACAGTTCCAGCTAAGGGCACTAATGCAAAAGGCAAGGAAGACTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000014546.15 ENSMUST00000209538.2 |
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| CDS CCA 72 bp | CTCACTGATTGTGCCATCTCTGCTGGGACTATTTGGTaGCCCTGTTGCTGTGTATGGTGGGTAGGATGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: LTDCAISAGTIW*PCCCVWWVGCR Trigger: TCTGCATCCTACCCACCATACACAGCAACAGGGCCACCAAATAGTCCCAGCAGAGATGGCACAATCAGTGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000209538.2 |
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| CDS CCA 72 bp | CCCATTTGCATCCACATGCTTTCCTCGATAACGCACTaGGATTGTACCAGTGAGGTTCACCAGCTCCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: PICIHMLSSITH*DCTSEVHQLPG Trigger: TCCAGGGAGCTGGTGAACCTCACTGGTACAATCCCAGTGCGTTATCGAGGAAAGCATGTGGATGCAAATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000210664.2 |
||
| CDS GCA 72 bp | CAGATCTTCCTCTGTTCGTTTCAAGGCATTAAGCTCTaGCTGGGCACCATCCATTTCCTCCTTCATCCGCCA | + |
|
Preference number: 6 (lower is better) Translates to: QIFLCSFQGIKL*LGTIHFLLHPP Trigger: TGGCGGATGAAGGAGGAAATGGATGGTGCCCAGGCAGAGCTTAATGCCTTGAAACGAACAGAGGAAGATCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014546.15 ENSMUST00000209538.2 |
||
| CDS TCA 72 bp | CTCCTTCATCCGCCATCTCAGTTTGTCACTGACTGCTaGGATGAGAGATGCACGGATAGTGTCCTCACTGAT | + |
|
Preference number: 6 (lower is better) Translates to: LLHPPSQFVTDC*DERCTDSVLTD Trigger: ATCAGTGAGGACACTATCCGTGCATCTCTCATCTCAGCAGTCAGTGACAAACTGAGATGGCGGATGAAGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014546.15 ENSMUST00000209538.2 |
||
| CDS CAA 72 bp | GCACCATCCATTTCCTCCTTCATCCGCCATCTCAGTTaGTCACTGACTGCTGAGATGAGAGATGCACGGATA | + |
|
Preference number: 6 (lower is better) Translates to: APSISSFIRHLS*SLTAEMRDARI Trigger: TATCCGTGCATCTCTCATCTCAGCAGTCAGTGACAAACTGAGATGGCGGATGAAGGAGGAAATGGATGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000014546.15 ENSMUST00000209538.2 |
||
| CDS CCA 72 bp | CAGTTTGACGGACGGTTAGATCTCTATATTTGTACTTaGACATCATCTTCTTCAGCTGACTCTCGGACACCG | + |
|
Preference number: 6 (lower is better) Translates to: QFDGRLDLYICT*TSSSSADSRTP Trigger: CGGTGTCCGAGAGTCAGCTGAAGAAGATGATGTCCAAGTACAAATATAGAGATCTAACCGTCCGTCAAACTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014546.15 ENSMUST00000143413.3 ENSMUST00000210664.2 ENSMUST00000211076.2 |
||
| CDS CCA 72 bp | TATTGGAATATTATATATATTACCTCGATAACGCACTaGGATTGTACCAGTGAGGTTCACCAGCTCCCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: YWNIIYITSITH*DCTSEVHQLPG Trigger: TCCAGGGAGCTGGTGAACCTCACTGGTACAATCCCAGTGCGTTATCGAGGTAATATATATAATATTCCAATA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
||
| CDS CCA 72 bp | GTTATATGGGTATGTGTCCAGCAGCCACAGGCATATTaGAATATTATATATATTACCTCGATAACGCACTGG | + |
|
Preference number: 6 (lower is better) Translates to: VIWVCVQQPQAY*NIIYITSITHW Trigger: CCAGTGCGTTATCGAGGTAATATATATAATATTCCAATATGCCTGTGGCTGCTGGACACATACCCATATAAC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS CAA 72 bp | GGTTATATGGGTATGTGTCCAGCAGCCACAGGCATATaGGAATATTATATATATTACCTCGATAACGCACTG | + |
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Preference number: 6 (lower is better) Translates to: GYMGMCPAATGI*EYYIYYLDNAL Trigger: CAGTGCGTTATCGAGGTAATATATATAATATTCCAATATGCCTGTGGCTGCTGGACACATACCCATATAACC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000014546.15 |
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| CDS TCA 72 bp | TTGAGATCTTTGTACATAGCGATGACATTGACAGTTTaGCGGACGGTTAGATCTCTATATTTGTACTTGGAC | + |
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Preference number: 6 (lower is better) Translates to: LRSLYIAMTLTV*RTVRSLYLYLD Trigger: GTCCAAGTACAAATATAGAGATCTAACCGTCCGTCAAACTGTCAATGTCATCGCTATGTACAAAGATCTCAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000014546.15 ENSMUST00000143413.3 ENSMUST00000210664.2 ENSMUST00000211076.2 |
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| CDS CAA 72 bp | CTGCCATCATTAAAAACATATGAATCCAATACAGGTTaGAGATCTTTGTACATAGCGATGACATTGACAGTT | + |
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Preference number: 6 (lower is better) Translates to: LPSLKTYESNTG*RSLYIAMTLTV Trigger: AACTGTCAATGTCATCGCTATGTACAAAGATCTCAAACCTGTATTGGATTCATATGTTTTTAATGATGGCAG 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000014546.15 ENSMUST00000210664.2 ENSMUST00000211076.2 |
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