Pregenerated sensors for TSEN54 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000020781Ensembl transcript IDs: ENSMUST00000021134.10, ENSMUST00000106481.9, ENSMUST00000136343.2, ENSMUST00000154304.8, ENSMUST00000157061.2
Found 185 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GGGGTGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTaGAAGCACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAA | + |
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Preference number: 1 (lower is better) Translates to: GVGASLSGSTSRQWA*KHSGQARGCARPYK Trigger: TTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCACCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| 3UTR TCA 90 bp | CACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTaGGTCCTATATGAGAGACAGCTGGCACGGCCCCTGAGAGCAGTC | + |
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Preference number: 1 (lower is better) Translates to: HLGSQTPMAWTVPSR*VLYERQLARPLRAV Trigger: GACTGCTCTCAGGGGCCGTGCCAGCTGTCTCTCATATAGGACTCACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| 3UTR CCA 90 bp | GTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTaGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACAGAAGACACC | + |
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Preference number: 1 (lower is better) Translates to: VTVRQHFQAVGLKAQ*PGKRVCTSLQTEDT Trigger: GGTGTCTTCTGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| 3UTR-3UTR TCA 90 bp | ACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACAGAAGACACCTAGGATCCAGGCAGTGGGCTTaGAAGCACAGTGGCCAGGCA | + |
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Preference number: 2 (lower is better) Translates to: TVARQEGVHVPTNRRHLGSRQWA*KHSGQA Trigger: TGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGA...TCCTAGGTGTCTTCTGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| 3UTR-3UTR CCA 90 bp | CACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACAGAAGACACCTAGGGGCTTGAAAGCACAGTaGCCAGGCAAGAGGGTGTGC | + |
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Preference number: 2 (lower is better) Translates to: HSGQARGCARPYKQKTPRGLKAQ*PGKRVC Trigger: GCACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCC...CCTAGGTGTCTTCTGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTACGGTTCCATCCAGGTaGGTCCTATATGAGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: QAALPGSGLESTVARQEGTVPSR*VLYERQ Trigger: CTGTCTCTCATATAGGACTCACCTGGATGGAACCGT...ACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| 3UTR-3UTR TCA 90 bp | AGCACCCCCTTGAATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTGGTAGGTCAAGCACTTaGGGCTGCAGAGGTCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: STPLNKGTVLSPNPSPGPGRSST*GCRGLG Trigger: TCCCAGACCTCTGCAGCCTCAAGTGCTTGACCTACC...AGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000154304.8 |
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| 3UTR-3UTR TCA 90 bp | AAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCTGAAAACAAGTCCTACGGTTCCATCCAGGTaGGTCCTATATGAGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: KGTVLSPNPSPGPLKTSPTVPSR*VLYERQ Trigger: CTGTCTCTCATATAGGACTCACCTGGATGGAACCGT...AGGACTTGTTTTCAGAGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| 3UTR-3UTR TCA 90 bp | AATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCTGAAAACAAGTACGGTTCCATCCAGGTaGGTCCTATATGAGAGACAG | + |
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Preference number: 2 (lower is better) Translates to: NKGTVLSPNPSPGPLKTSTVPSR*VLYERQ Trigger: CTGTCTCTCATATAGGACTCACCTGGATGGAACCGT...ACTTGTTTTCAGAGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| 3UTR-3UTR CAA 90 bp | GGTGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTTCCAGGCAGTGGGCTaGAAAGCACAGTGGCCAGGC | + |
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Preference number: 3 (lower is better) Translates to: GGGVTVRQHFQAVGLKAQFQAVG*KAQWPG Trigger: GCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAA...CTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| 3UTR TCA 72 bp | GCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTaGAAGCACAGTGGCCAGGCAAGAGGGTGTGCACGT | + |
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Preference number: 3 (lower is better) Translates to: ASLSGSTSRQWA*KHSGQARGCAR Trigger: ACGTGCACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| 3UTR TCA 72 bp | AATGGCCTGGACGGTTCCATCCAGGTGAGTCCTATATaGGAGACAGCTGGCACGGCCCCTGAGAGCAGTCCA | + |
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Preference number: 3 (lower is better) Translates to: NGLDGSIQVSPI*ETAGTAPESSP Trigger: TGGACTGCTCTCAGGGGCCGTGCCAGCTGTCTCTCATATAGGACTCACCTGGATGGAACCGTCCAGGCCATT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| 3UTR CCA 72 bp | AGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTaGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACA | + |
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Preference number: 3 (lower is better) Translates to: RQHFQAVGLKAQ*PGKRVCTSLQT Trigger: TGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| 3UTR TCA 72 bp | TGGCTTTGGCTTTATGGCACGAAGCAAGCACCCCCTTaGATAAAGGCACAGTCCTTTCTCCTAACCCAAGTC | + |
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Preference number: 3 (lower is better) Translates to: WLWLYGTKQAPP*IKAQSFLLTQV Trigger: GACTTGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCTTGCTTCGTGCCATAAAGCCAAAGCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR CCA 90 bp | CAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTCGCTGTGGTAGCTTCTaGGACCGCGAGCGCGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: QAALPGSGLESTVARQEGRCGSF*DRERAA Trigger: CGCCGCGCGCTCGCGGTCCCAGAAGCTACCACAGCG...ACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTG 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | GCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTGTGCGCTGTGGTAGCTTCTaGGACCGCGAGCGCGCGGCG | + |
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Preference number: 4 (lower is better) Translates to: AALPGSGLESTVARQEGVRCGSF*DRERAA Trigger: CGCCGCGCGCTCGCGGTCCCAGAAGCTACCACAGCG...CACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | CAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGCCGCGGCCACCAAGCTaGCCAGGCGCTCCACGCGCT | + |
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Preference number: 4 (lower is better) Translates to: QKTPRITDPNGLDGSIQVPRPPS*PGAPRA Trigger: AGCGCGTGGAGCGCCTGGGCAGCTTGGTGGCCGCGG...CACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR TCA 90 bp | GGGTGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGCCCTGCCTGGGGCTTaGGTCCTGAGACTTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: GWGRHCQAALPGSGLESTALPGA*VLRLLL Trigger: GAGGAGAAGTCTCAGGACTCAAGCCCCAGGCAGGGC...TGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | CGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGCCGGGAGGAAGTCCTTaGGGCCATGCGACCGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: RHCQAALPGSGLESTVARPGGSP*GHATAV Trigger: CACAGCGGTCGCATGGCCCCAAGGACTTCCTCCCGG...CCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | GGTGGGGGTGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGAGCAGCTCTGGGGCTaGAGCAGGCAGGAAAGTGTG | + |
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Preference number: 4 (lower is better) Translates to: GGGGGVTVRQHFQAVGLKEQLWG*SRQESV Trigger: CACACTTTCCTGCCTGCTCCAGCCCCAGAGCTGCTC...TTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCACCCCCACC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | GGTGGGGGTGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAATGCGTCTGTCGCCTCTaGAGCAGCTCCTTGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: GGGGGVTVRQHFQAVGLKCVCRL*SSSLYS Trigger: GGAGTACAAGGAGCTGCTGCAGAGGCGACAGACGCA...TTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCACCCCCACC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR CCA 90 bp | GCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAAGCTGCCACAGCTCTTaGCGACACAGGCGCAGCCGC | + |
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Preference number: 4 (lower is better) Translates to: AVGLKAQWPGKRVCTSLQSCHSS*RHRRSR Trigger: GCGGCTGCGCCTGTGTCGCCAAGAGCTGTGGCAGCT...TTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR TCA 90 bp | CAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTCTGCCGTCCTTCCTCTaGGTAGCCCATGGTCTGCCA | + |
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Preference number: 4 (lower is better) Translates to: QAALPGSGLESTVARQEGLPSFL*VAHGLP Trigger: TGGCAGACCATGGGCTACTCAGAGGAAGGACGGCAG...ACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR TCA 90 bp | CGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGCTGTCCCTCGCCCAATaGCATTGGCTGGGAGCAGCT | + |
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Preference number: 4 (lower is better) Translates to: RHCQAALPGSGLESTVARLSLAQ*HWLGAA Trigger: AGCTGCTCCCAGCCAATGTCATTGGGCGAGGGACAG...CCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR GCA 90 bp | GCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAGAGGACCCCAGGAACTaGAAGGGGAGCTCTGAGCCC | + |
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Preference number: 4 (lower is better) Translates to: AVGLKAQWPGKRVCTSLQEDPRN*KGSSEP Trigger: GGGCTCAGAGCTCCCCTTGCAGTTCCTGGGGTCCTC...TTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR TCA 90 bp | GGTGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGCTGGGGCTTGAGTCCTaGGACTTCTCCTCTGGGTAT | + |
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Preference number: 4 (lower is better) Translates to: GGGVTVRQHFQAVGLKAQLGLES*DFSSGY Trigger: ATACCCAGAGGAGAAGTCTCAGGACTCAAGCCCCAG...CTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR TCA 90 bp | GGTGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGATCAGAGCAAGGCTCTaGGGACCCCAGGAACTGCAA | + |
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Preference number: 4 (lower is better) Translates to: GGGVTVRQHFQAVGLKAQIRARL*GPQELQ Trigger: TTGCAGTTCCTGGGGTCCTCAGAGCCTTGCTCTGAT...CTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCACC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | TGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGAAGTCCTTGGGGCCATaGGACCGCTGTGGTAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: WGRHCQAALPGSGLESTVKSLGP*DRCGSF Trigger: GAAGCTACCACAGCGGTCGCATGGCCCCAAGGACTT...CACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | CAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGTCCTCCGCCAGCAGCTaGCACAGCTCTTGGCGACAC | + |
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Preference number: 4 (lower is better) Translates to: QKTPRITDPNGLDGSIQVSSASS*HSSWRH Trigger: GTGTCGCCAAGAGCTGTGGCAGCTGCTGGCGGAGGA...CACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | CCTGGACGGTTCCATCCAGGTGAGTCCTATATGAGAGACAGCTGGCACGGCCCCGGCGGCAGGGAGTTCTaGAGGACCTTGGGCTTCTTA | + |
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Preference number: 4 (lower is better) Translates to: PGRFHPGESYMRDSWHGPGGREF*RTLGFL Trigger: TAAGAAGCCCAAGGTCCTGCAGAACTCCCTGCCGCC...GGGGCCGTGCCAGCTGTCTCTCATATAGGACTCACCTGGATGGAACCGTCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | CAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGAGCTCCTTGTACTCCTaGCAGCTGGAGCAGCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: QKTPRITDPNGLDGSIQVSSLYS*QLEQPR Trigger: GCGGGGCTGCTCCAGCTGGCAGGAGTACAAGGAGCT...CACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR TCA 90 bp | GCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTGTGGTCTCTTCAGGTGGCTaGAGACCTGGTACTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: AALPGSGLESTVARQEGVVSSGG*RPGTAG Trigger: TCCTGCAGTACCAGGTCTTCAGCCACCTGAAGAGAC...CACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR TCA 90 bp | CAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTGTCTCTTCAGGTGGCTaGAGACCTGGTACTGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: QAALPGSGLESTVARQEGVSSGG*RPGTAG Trigger: TCCTGCAGTACCAGGTCTTCAGCCACCTGAAGAGAC...ACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | ACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGCCGCACCTCGGGATCTaGGTTAACATCCTCCCGGAA | + |
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Preference number: 4 (lower is better) Translates to: TVRQHFQAVGLKAQWPGKPHLGI*VNILPE Trigger: TTCCGGGAGGATGTTAACGCAGATCCCGAGGTGCGG...CTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR GCA 90 bp | CCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGAGTCCTATAAGCTCCTTGTACTCCTaGCAGCTGGAGCAGCCCCGC | + |
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Preference number: 4 (lower is better) Translates to: PRITDPNGLDGSIQVSPISSLYS*QLEQPR Trigger: GCGGGGCTGCTCCAGCTGGCAGGAGTACAAGGAGCT...TATAGGACTCACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR GCA 90 bp | GGTGGGGGTGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAAGTACAGAGATATGTTaGAGGACCGCGGCTGGACAA | + |
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Preference number: 4 (lower is better) Translates to: GGGGGVTVRQHFQAVGLKSTEIC*RTAAGQ Trigger: TTGTCCAGCCGCGGTCCTGCAACATATCTCTGTACT...TTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCACCCCCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR CCA 90 bp | GCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTGTGCCTCTGAGTAGCCCATaGTCTGCCAGAATTTCCCCG | + |
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Preference number: 4 (lower is better) Translates to: AALPGSGLESTVARQEGVPLSSP*SARISP Trigger: CGGGGAAATTCTGGCAGACCATGGGCTACTCAGAGG...CACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | GGTGGGGGTGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAATCTGTCAGCAGCAGCTaGTATGCCTCTTGGATAGAC | + |
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Preference number: 4 (lower is better) Translates to: GGGGGVTVRQHFQAVGLKSVSSS*YASWID Trigger: GTCTATCCAAGAGGCATACCAGCTGCTGCTGACAGA...TTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCACCCCCACC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | CGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGGCAGGCAGGAAAGTGTaGCGACTATCAGAGGCCATG | + |
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Preference number: 4 (lower is better) Translates to: RHCQAALPGSGLESTVARAGRKV*RLSEAM Trigger: CATGGCCTCTGATAGTCGCCACACTTTCCTGCCTGC...CCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | GCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTGTGAGCTTCTCCCTCCGCTaGTTCAGCTTTTGGCACCAG | + |
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Preference number: 4 (lower is better) Translates to: AALPGSGLESTVARQEGVSFSLR*FSFWHQ Trigger: CTGGTGCCAAAAGCTGAACCAGCGGAGGGAGAAGCT...CACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR TCA 90 bp | GCAAGCACCCCCTTGAATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGGCCCTGCCTGGGGCTTaGGTCCTGAGACTTCTCCTC | + |
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Preference number: 4 (lower is better) Translates to: ASTPLNKGTVLSPNPSPGALPGA*VLRLLL Trigger: GAGGAGAAGTCTCAGGACTCAAGCCCCAGGCAGGGC...CCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCTTGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR TCA 90 bp | GGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACAGAGGTAGGTCAAGCACTTaGGGCTGCAGAGGTCTGGGA | + |
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Preference number: 4 (lower is better) Translates to: GLESTVARQEGVHVPTNRGRSST*GCRGLG Trigger: TCCCAGACCTCTGCAGCCTCAAGTGCTTGACCTACC...TCTGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | CAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGAAGTCCTTGGGGCCATaGGACCGCTGTGGTAGCTTC | + |
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Preference number: 4 (lower is better) Translates to: QKTPRITDPNGLDGSIQVKSLGP*DRCGSF Trigger: GAAGCTACCACAGCGGTCGCATGGCCCCAAGGACTT...CACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | CCTACAAACAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCTCCGCCAGCAGCTaGCACAGCTCTTGGCGACAC | + |
|
Preference number: 4 (lower is better) Translates to: PTNRRHLGSQTPMAWTVPSSASS*HSSWRH Trigger: GTGTCGCCAAGAGCTGTGGCAGCTGCTGGCGGAGGA...TGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTGTTTGTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | CACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACAGAAGACACCTAGGTGCTGGACCACTGCTTaGTGTTCCCGGTCTCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: HSGQARGCARPYKQKTPRCWTTA*CSRSLR Trigger: CCGTAGAGACCGGGAACAGCAAGCAGTGGTCCAGCA...CCTAGGTGTCTTCTGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR GCA 90 bp | GGTGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGAGTACAGAGATATGTTaGAGGACCGCGGCTGGACAA | + |
|
Preference number: 4 (lower is better) Translates to: GGGVTVRQHFQAVGLKAQSTEIC*RTAAGQ Trigger: TTGTCCAGCCGCGGTCCTGCAACATATCTCTGTACT...CTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCACC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR GCA 90 bp | GGGTGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAACATCGAAGCTGATCTaGAAGCCTCCAGACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: GWGRHCQAALPGSGLESTTSKLI*KPPDFS Trigger: GGAGAAGTCTGGAGGCTTGCAGATCAGCTTCGATGT...TGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000154304.8 |
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| CDS-3UTR CCA 90 bp | TGGCACGAAGCAAGCACCCCCTTGAATAAAGGCACAGTCCTTTCTCCTAACCCACCGGGAGGAAGTCCTTaGGGCCATGCGACCGCTGTG | + |
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Preference number: 4 (lower is better) Translates to: WHEASTPLNKGTVLSPNPPGGSP*GHATAV Trigger: CACAGCGGTCGCATGGCCCCAAGGACTTCCTCCCGG...TGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCTTGCTTCGTGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | GGGTGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACATCTGTCAGCAGCAGCTaGTATGCCTCTTGGATAGAC | + |
|
Preference number: 4 (lower is better) Translates to: GWGRHCQAALPGSGLESTSVSSS*YASWID Trigger: GTCTATCCAAGAGGCATACCAGCTGCTGCTGACAGA...TGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | TGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGCGCTGGTTCAGCTTTTaGCACCAGGACTCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: WGRHCQAALPGSGLESTVRWFSF*HQDSAS Trigger: AGATGCTGAGTCCTGGTGCCAAAAGCTGAACCAGCG...CACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR TCA 90 bp | CCTACAAACAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCACTGTCCCTCGCCCAATaGCATTGGCTGGGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: PTNRRHLGSQTPMAWTVPLSLAQ*HWLGAA Trigger: AGCTGCTCCCAGCCAATGTCATTGGGCGAGGGACAG...TGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTGTTTGTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR TCA 90 bp | GCAAGCACCCCCTTGAATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCTGTCCCTCGCCCAATaGCATTGGCTGGGAGCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: ASTPLNKGTVLSPNPSPGLSLAQ*HWLGAA Trigger: AGCTGCTCCCAGCCAATGTCATTGGGCGAGGGACAG...CCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR TCA 90 bp | AGCACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACAGAAGACACCTAGGTAGGTCAAGCACTTaGGGCTGCAGAGGTCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: STVARQEGVHVPTNRRHLGRSST*GCRGLG Trigger: TCCCAGACCTCTGCAGCCTCAAGTGCTTGACCTACC...TAGGTGTCTTCTGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | CAATGGCCTGGACGGTTCCATCCAGGTGAGTCCTATATGAGAGACAGCTGGCACTGCTGGACCACTGCTTaGTGTTCCCGGTCTCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: QWPGRFHPGESYMRDSWHCWTTA*CSRSLR Trigger: CCGTAGAGACCGGGAACAGCAAGCAGTGGTCCAGCA...GTGCCAGCTGTCTCTCATATAGGACTCACCTGGATGGAACCGTCCAGGCCATTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR GCA 90 bp | AGCACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACAGAAGACACCTATGCTGGACCACTGCTTaGTGTTCCCGGTCTCTACGG | + |
|
Preference number: 4 (lower is better) Translates to: STVARQEGVHVPTNRRHLCWTTA*CSRSLR Trigger: CCGTAGAGACCGGGAACAGCAAGCAGTGGTCCAGCA...TAGGTGTCTTCTGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR GCA 90 bp | ACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACAGAAGACACCTAGGACCGCACCTCGGGATCTaGGTTAACATCCTCCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: TVARQEGVHVPTNRRHLGPHLGI*VNILPE Trigger: TTCCGGGAGGATGTTAACGCAGATCCCGAGGTGCGG...TCCTAGGTGTCTTCTGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR CCA 90 bp | CCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGAGTCCTATACACAAAGCCCTCTTCTaGTTTCCACTCCGCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: PRITDPNGLDGSIQVSPIHKALF*FPLRGH Trigger: GTGGCCGCGGAGTGGAAACCAGAAGAGGGCTTTGTG...TATAGGACTCACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | CGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGTTCTCCTCTGGGTATTaGCTACTCTGGTCACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: RHCQAALPGSGLESTVARFSSGY*LLWSQA Trigger: TGCCTGTGACCAGAGTAGCCAATACCCAGAGGAGAA...CCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | GCAAGCACCCCCTTGAATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGGCTCTGAGCCCTGCCTaGGGCTTGAGTCCTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: ASTPLNKGTVLSPNPSPGALSPA*GLSPET Trigger: AGTCTCAGGACTCAAGCCCCAGGCAGGGCTCAGAGC...CCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | GCAAGCACCCCCTTGAATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGGAGCAGCTCTGGGGCTaGAGCAGGCAGGAAAGTGTG | + |
|
Preference number: 4 (lower is better) Translates to: ASTPLNKGTVLSPNPSPGEQLWG*SRQESV Trigger: CACACTTTCCTGCCTGCTCCAGCCCCAGAGCTGCTC...CCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR TCA 90 bp | CCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGAGTCCTATAATCAGAGCAAGGCTCTaGGGACCCCAGGAACTGCAA | + |
|
Preference number: 4 (lower is better) Translates to: PRITDPNGLDGSIQVSPIIRARL*GPQELQ Trigger: TTGCAGTTCCTGGGGTCCTCAGAGCCTTGCTCTGAT...TATAGGACTCACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | AAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCTGAAAACAAGTCCTGAGGACCCCAGGAACTaGAAGGGGAGCTCTGAGCCC | + |
|
Preference number: 4 (lower is better) Translates to: KGTVLSPNPSPGPLKTSPEDPRN*KGSSEP Trigger: GGGCTCAGAGCTCCCCTTGCAGTTCCTGGGGTCCTC...AGGACTTGTTTTCAGAGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | CCTACAAACAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATGCGTCTGTCGCCTCTaGAGCAGCTCCTTGTACTCC | + |
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Preference number: 4 (lower is better) Translates to: PTNRRHLGSQTPMAWTVPCVCRL*SSSLYS Trigger: GGAGTACAAGGAGCTGCTGCAGAGGCGACAGACGCA...TGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTGTTTGTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR GCA 90 bp | CAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTGCAAGGTGTGTCGTCTaGAGTACAGAGATATGTTGC | + |
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Preference number: 4 (lower is better) Translates to: QAALPGSGLESTVARQEGARCVV*STEICC Trigger: GCAACATATCTCTGTACTGCAGACGACACACCTTGC...ACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR CCA 90 bp | GTCCCTACAAACAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCACAAAGCCCTCTTCTaGTTTCCACTCCGCGGCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VPTNRRHLGSQTPMAWTVHKALF*FPLRGH Trigger: GTGGCCGCGGAGTGGAAACCAGAAGAGGGCTTTGTG...AACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTGTTTGTAGGGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | CCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGAGTCCTATAGGGTATTGGCTACTCTaGTCACAGGCAGGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PRITDPNGLDGSIQVSPIGYWLL*SQAGEL Trigger: CAGCTCACCTGCCTGTGACCAGAGTAGCCAATACCC...TATAGGACTCACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | GCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAACTGAGACTTCTCCTCTaGGTATTGGCTACTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: AVGLKAQWPGKRVCTSLQLRLLL*VLATLV Trigger: GACCAGAGTAGCCAATACCCAGAGGAGAAGTCTCAG...TTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | TGGCACGAAGCAAGCACCCCCTTGAATAAAGGCACAGTCCTTTCTCCTAACCCAGCTCTGAGCCCTGCCTaGGGCTTGAGTCCTGAGACT | + |
|
Preference number: 4 (lower is better) Translates to: WHEASTPLNKGTVLSPNPALSPA*GLSPET Trigger: AGTCTCAGGACTCAAGCCCCAGGCAGGGCTCAGAGC...TGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCTTGCTTCGTGCCA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | CCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGAGTCCTATAAGCTTCTCCCTCCGCTaGTTCAGCTTTTGGCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRITDPNGLDGSIQVSPISFSLR*FSFWHQ Trigger: CTGGTGCCAAAAGCTGAACCAGCGGAGGGAGAAGCT...TATAGGACTCACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR TCA 90 bp | AAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCTGAAAACAAGTCCTCTGCCGTCCTTCCTCTaGGTAGCCCATGGTCTGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KGTVLSPNPSPGPLKTSPLPSFL*VAHGLP Trigger: TGGCAGACCATGGGCTACTCAGAGGAAGGACGGCAG...AGGACTTGTTTTCAGAGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR TCA 90 bp | CACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACAGAAGACACCTAGGGGCCATGTTGGGGAATaGGATCTGCTCAAAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: HSGQARGCARPYKQKTPRGHVGE*DLLKVP Trigger: TGGAACTTTGAGCAGATCTCATTCCCCAACATGGCC...CCTAGGTGTCTTCTGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | CCTACAAACAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCAAACTCCTCTTCCTCTTaGCAGACCCATCCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: PTNRRHLGSQTPMAWTVPNSSSS*QTHPPG Trigger: GCCTGGAGGATGGGTCTGGCAAGAGGAAGAGGAGTT...TGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTGTTTGTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | CAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGAGCTGGTATGCCTCTTaGATAGACAGTGGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: QKTPRITDPNGLDGSIQVSWYAS*IDSGRS Trigger: AGACCTCCCACTGTCTATCCAAGAGGCATACCAGCT...CACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | CACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACAGAAGACACCTAGGAGCTGGTATGCCTCTTaGATAGACAGTGGGAGGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HSGQARGCARPYKQKTPRSWYAS*IDSGRS Trigger: AGACCTCCCACTGTCTATCCAAGAGGCATACCAGCT...CCTAGGTGTCTTCTGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | GTCCCTACAAACAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTGGGTATTGGCTACTCTaGTCACAGGCAGGTGAGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VPTNRRHLGSQTPMAWTVGYWLL*SQAGEL Trigger: CAGCTCACCTGCCTGTGACCAGAGTAGCCAATACCC...AACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTGTTTGTAGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | TGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGTATCAGAGGCCATGTTaGGGAATGAGATCTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: WGRHCQAALPGSGLESTVYQRPC*GMRSAQ Trigger: TTGAGCAGATCTCATTCCCCAACATGGCCTCTGATA...CACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | GTCCCTACAAACAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTGCAGGCAGGAAAGTGTaGCGACTATCAGAGGCCATG | + |
|
Preference number: 4 (lower is better) Translates to: VPTNRRHLGSQTPMAWTVAGRKV*RLSEAM Trigger: CATGGCCTCTGATAGTCGCCACACTTTCCTGCCTGC...AACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTGTTTGTAGGGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | GCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAAAGGAGATGTCACCGTaGTCCACTAGAGCAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: AVGLKAQWPGKRVCTSLQKEMSP*STRAKI Trigger: GATCTTTGCTCTAGTGGACCACGGTGACATCTCCTT...TTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR TCA 90 bp | CCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGAGTCCTATAGGCCATGTTGGGGAATaGGATCTGCTCAAAGTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: PRITDPNGLDGSIQVSPIGHVGE*DLLKVP Trigger: TGGAACTTTGAGCAGATCTCATTCCCCAACATGGCC...TATAGGACTCACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | CCTACAAACAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCACAGCAGCAGCTGGTATaGCTCTTGGATAGACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PTNRRHLGSQTPMAWTVPQQQLV*LLDRQW Trigger: CCACTGTCTATCCAAGAGGCATACCAGCTGCTGCTG...TGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTGTTTGTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | AGCACCCCCTTGAATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCAGCAGCAGCTGGTATaGCTCTTGGATAGACAGTGG | + |
|
Preference number: 4 (lower is better) Translates to: STPLNKGTVLSPNPSPGPQQQLV*LLDRQW Trigger: CCACTGTCTATCCAAGAGGCATACCAGCTGCTGCTG...AGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
||
| CDS-3UTR GCA 90 bp | CAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGTTGGGGAATGAGATCTaGTCAAAGTTCCAGCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: QKTPRITDPNGLDGSIQVLGNEI*SKFQRS Trigger: GCTACGCTGGAACTTTGAGCAGATCTCATTCCCCAA...CACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | CACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACAGAAGACACCTAGGTTGGGGAATGAGATCTaGTCAAAGTTCCAGCGTAGC | + |
|
Preference number: 4 (lower is better) Translates to: HSGQARGCARPYKQKTPRLGNEI*SKFQRS Trigger: GCTACGCTGGAACTTTGAGCAGATCTCATTCCCCAA...CCTAGGTGTCTTCTGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | AAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCTGAAAACAAGTCCTCCGCACCTCGGGATCTaGGTTAACATCCTCCCGGAA | + |
|
Preference number: 4 (lower is better) Translates to: KGTVLSPNPSPGPLKTSPPHLGI*VNILPE Trigger: TTCCGGGAGGATGTTAACGCAGATCCCGAGGTGCGG...AGGACTTGTTTTCAGAGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR GCA 90 bp | AATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCTGAAAACAAGTAGCTCCTTGTACTCCTaGCAGCTGGAGCAGCCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: NKGTVLSPNPSPGPLKTSSSLYS*QLEQPR Trigger: GCGGGGCTGCTCCAGCTGGCAGGAGTACAAGGAGCT...ACTTGTTTTCAGAGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR GCA 90 bp | CAATGGCCTGGACGGTTCCATCCAGGTGAGTCCTATATGAGAGACAGCTGGCACACATCGAAGCTGATCTaGAAGCCTCCAGACTTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: QWPGRFHPGESYMRDSWHTSKLI*KPPDFS Trigger: GGAGAAGTCTGGAGGCTTGCAGATCAGCTTCGATGT...GTGCCAGCTGTCTCTCATATAGGACTCACCTGGATGGAACCGTCCAGGCCATTG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000154304.8 |
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| CDS-3UTR CCA 90 bp | CACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACAGAAGACACCTAGGCTCTTGGATAGACAGTaGGAGGTCTTGGTAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: HSGQARGCARPYKQKTPRLLDRQ*EVLVEE Trigger: CTCTTCTACCAAGACCTCCCACTGTCTATCCAAGAG...CCTAGGTGTCTTCTGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | TGGCACGAAGCAAGCACCCCCTTGAATAAAGGCACAGTCCTTTCTCCTAACCCACCCAGTCTCTTCAGGTaGCTGAAGACCTGGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: WHEASTPLNKGTVLSPNPPSLFR*LKTWYC Trigger: GCAGTACCAGGTCTTCAGCCACCTGAAGAGACTGGG...TGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCTTGCTTCGTGCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | ACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACAGAAGACACCTAGGACTGAGACTTCTCCTCTaGGTATTGGCTACTCTGGTC | + |
|
Preference number: 4 (lower is better) Translates to: TVARQEGVHVPTNRRHLGLRLLL*VLATLV Trigger: GACCAGAGTAGCCAATACCCAGAGGAGAAGTCTCAG...TCCTAGGTGTCTTCTGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | GCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAATATCAGAGGCCATGTTaGGGAATGAGATCTGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AVGLKAQWPGKRVCTSLQYQRPC*GMRSAQ Trigger: TTGAGCAGATCTCATTCCCCAACATGGCCTCTGATA...TTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | GCAAGCACCCCCTTGAATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCGCTGGTTCAGCTTTTaGCACCAGGACTCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: ASTPLNKGTVLSPNPSPGRWFSF*HQDSAS Trigger: AGATGCTGAGTCCTGGTGCCAAAAGCTGAACCAGCG...CCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCTTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR TCA 90 bp | GTCCCTACAAACAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATTCTCTATTTTGTaGCTCTCTCGGTCACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: VPTNRRHLGSQTPMAWTVPFSIL*LSRSHP Trigger: GGGGTGTGACCGAGAGAGTCACAAAATAGAGAATGG...AACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTGTTTGTAGGGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR TCA 90 bp | CCTACAAACAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCACCATTCTCTATTTTGTaGCTCTCTCGGTCACACCCC | + |
|
Preference number: 4 (lower is better) Translates to: PTNRRHLGSQTPMAWTVPPFSIL*LSRSHP Trigger: GGGGTGTGACCGAGAGAGTCACAAAATAGAGAATGG...TGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTGTTTGTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | AAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCTGAAAACAAGTCCTCCTCTGAGTAGCCCATaGTCTGCCAGAATTTCCCCG | + |
|
Preference number: 4 (lower is better) Translates to: KGTVLSPNPSPGPLKTSPPLSSP*SARISP Trigger: CGGGGAAATTCTGGCAGACCATGGGCTACTCAGAGG...AGGACTTGTTTTCAGAGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | ACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACAGAAGACACCTAGGACTCTTGGATAGACAGTaGGAGGTCTTGGTAGAAGAG | + |
|
Preference number: 4 (lower is better) Translates to: TVARQEGVHVPTNRRHLGLLDRQ*EVLVEE Trigger: CTCTTCTACCAAGACCTCCCACTGTCTATCCAAGAG...TCCTAGGTGTCTTCTGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | AAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCTGAAAACAAGTCCTCCCAGTCTCTTCAGGTaGCTGAAGACCTGGTACTGC | + |
|
Preference number: 4 (lower is better) Translates to: KGTVLSPNPSPGPLKTSPPSLFR*LKTWYC Trigger: GCAGTACCAGGTCTTCAGCCACCTGAAGAGACTGGG...AGGACTTGTTTTCAGAGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CCA 90 bp | TGGCACGAAGCAAGCACCCCCTTGAATAAAGGCACAGTCCTTTCTCCTAACCCACGCTGGTTCAGCTTTTaGCACCAGGACTCAGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: WHEASTPLNKGTVLSPNPRWFSF*HQDSAS Trigger: AGATGCTGAGTCCTGGTGCCAAAAGCTGAACCAGCG...TGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCTTGCTTCGTGCCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR GCA 90 bp | AATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCTGAAAACAAGTGGCGGCAGGGAGTTCTaGAGGACCTTGGGCTTCTTA | + |
|
Preference number: 4 (lower is better) Translates to: NKGTVLSPNPSPGPLKTSGGREF*RTLGFL Trigger: TAAGAAGCCCAAGGTCCTGCAGAACTCCCTGCCGCC...ACTTGTTTTCAGAGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | AATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCTGAAAACAAGTTGCGTCTGTCGCCTCTaGAGCAGCTCCTTGTACTCC | + |
|
Preference number: 4 (lower is better) Translates to: NKGTVLSPNPSPGPLKTSCVCRL*SSSLYS Trigger: GGAGTACAAGGAGCTGCTGCAGAGGCGACAGACGCA...ACTTGTTTTCAGAGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR GCA 90 bp | AGCACCCCCTTGAATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTGCAAGGTGTGTCGTCTaGAGTACAGAGATATGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: STPLNKGTVLSPNPSPGPARCVV*STEICC Trigger: GCAACATATCTCTGTACTGCAGACGACACACCTTGC...AGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR CCA 90 bp | GCAAGCACCCCCTTGAATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGAAGGAGATGTCACCGTaGTCCACTAGAGCAAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: ASTPLNKGTVLSPNPSPGKEMSP*STRAKI Trigger: GATCTTTGCTCTAGTGGACCACGGTGACATCTCCTT...CCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCTTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR GCA 90 bp | AATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCTGAAAACAAGTAACTCCTCTTCCTCTTaGCAGACCCATCCTCCAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NKGTVLSPNPSPGPLKTSNSSSS*QTHPPG Trigger: GCCTGGAGGATGGGTCTGGCAAGAGGAAGAGGAGTT...ACTTGTTTTCAGAGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| 3UTR CAA 72 bp | ATGGCTTTGGCTTTATGGCACGAAGCAAGCACCCCCTaGAATAAAGGCACAGTCCTTTCTCCTAACCCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: MALALWHEASTP*NKGTVLSPNPS Trigger: ACTTGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCTTGCTTCGTGCCATAAAGCCAAAGCCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS-3UTR CCA 90 bp | AATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCTGAAAACAAGTTTCTCCTCTGGGTATTaGCTACTCTGGTCACAGGCA | + |
|
Preference number: 4 (lower is better) Translates to: NKGTVLSPNPSPGPLKTSFSSGY*LLWSQA Trigger: TGCCTGTGACCAGAGTAGCCAATACCCAGAGGAGAA...ACTTGTTTTCAGAGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS GCA 90 bp | TCCGCCTGGGCCTCCGAGCCGTCCGGGAGGAAGTCCTTGGGGCCATaGGACCGCTGTGGTAGCTTCTGGGACCGCGAGCGCGCGGCGCGG | + |
|
Preference number: 5 (lower is better) Translates to: SAWASEPSGRKSLGP*DRCGSFWDRERAAR Trigger: CCGCGCCGCGCGCTCGCGGTCCCAGAAGCTACCACAGCGGTCGCATGGCCCCAAGGACTTCCTCCCGGACGGCTCGGAGGCCCAGGCGGA 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS CCA 90 bp | GCAGCCGCTCCGCCTGGGCCTCCGAGCCGTCCGGGAGGAAGTCCTTaGGGCCATGCGACCGCTGTGGTAGCTTCTGGGACCGCGAGCGCG | + |
|
Preference number: 5 (lower is better) Translates to: AAAPPGPPSRPGGSP*GHATAVVASGTASA Trigger: CGCGCTCGCGGTCCCAGAAGCTACCACAGCGGTCGCATGGCCCCAAGGACTTCCTCCCGGACGGCTCGGAGGCCCAGGCGGAGCGGCTGC 73% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS CCA 90 bp | AGCAGCTGCCACAGCTCTTGGCGACACAGGCGCAGCCGCTCCGCCTaGGCCTCCGAGCCGTCCGGGAGGAAGTCCTTGGGGCCATGCGAC | + |
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Preference number: 5 (lower is better) Translates to: SSCHSSWRHRRSRSA*ASEPSGRKSLGPCD Trigger: GTCGCATGGCCCCAAGGACTTCCTCCCGGACGGCTCGGAGGCCCAGGCGGAGCGGCTGCGCCTGTGTCGCCAAGAGCTGTGGCAGCTGCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS GCA 90 bp | CATAGGTGTGGAGGCCGGGGCTGGCTCTTCTGCGTCTGTCGCCTCTaGAGCAGCTCCTTGTACTCCTGCCAGCTGGAGCAGCCCCGCACC | + |
|
Preference number: 5 (lower is better) Translates to: HRCGGRGWLFCVCRL*SSSLYSCQLEQPRT Trigger: GGTGCGGGGCTGCTCCAGCTGGCAGGAGTACAAGGAGCTGCTGCAGAGGCGACAGACGCAGAAGAGCCAGCCCCGGCCTCCACACCTATG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 ENSMUST00000157061.2 |
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| CDS-3UTR CAA 90 bp | TGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGCAGCTGCCACAGCTCTaGGCGACACAGGCGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: WGRHCQAALPGSGLESTVQLPQL*ATQAQP Trigger: CGGCTGCGCCTGTGTCGCCAAGAGCTGTGGCAGCTG...CACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS CCA 90 bp | CCAGAATTTCCCCGCAGGAGACGTCAACTCCACAAAGCCCTCTTCTaGTTTCCACTCCGCGGCCACCAAGCTGCCCAGGCGCTCCACGCG | + |
|
Preference number: 5 (lower is better) Translates to: PEFPRRRRQLHKALF*FPLRGHQAAQALHA Trigger: CGCGTGGAGCGCCTGGGCAGCTTGGTGGCCGCGGAGTGGAAACCAGAAGAGGGCTTTGTGGAGTTGACGTCTCCTGCGGGGAAATTCTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS GCA 90 bp | GAGCAGCCCCGCACCTCGGGATCTGCGTTAACATCCTCCCGGAACTaGTGGACCACTGCTTGCTGTTCCCGGTCTCTACGGGAGAGCTTC | + |
|
Preference number: 5 (lower is better) Translates to: EQPRTSGSALTSSRN*WTTACCSRSLRESF Trigger: GAAGCTCTCCCGTAGAGACCGGGAACAGCAAGCAGTGGTCCAGCAGTTCCGGGAGGATGTTAACGCAGATCCCGAGGTGCGGGGCTGCTC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS CCA 90 bp | CAGCCCCGCACCTCGGGATCTGCGTTAACATCCTCCCGGAACTGCTaGACCACTGCTTGCTGTTCCCGGTCTCTACGGGAGAGCTTCTCC | + |
|
Preference number: 5 (lower is better) Translates to: QPRTSGSALTSSRNC*TTACCSRSLRESFS Trigger: GGAGAAGCTCTCCCGTAGAGACCGGGAACAGCAAGCAGTGGTCCAGCAGTTCCGGGAGGATGTTAACGCAGATCCCGAGGTGCGGGGCTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS GCA 90 bp | CACCTCGGGATCTGCGTTAACATCCTCCCGGAACTGCTGGACCACTaGTTGCTGTTCCCGGTCTCTACGGGAGAGCTTCTCCCTCCGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HLGICVNILPELLDH*LLFPVSTGELLPPL Trigger: CAGCGGAGGGAGAAGCTCTCCCGTAGAGACCGGGAACAGCAAGCAGTGGTCCAGCAGTTCCGGGAGGATGTTAACGCAGATCCCGAGGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS GCA 90 bp | CTCCTTGTACTCCTGCCAGCTGGAGCAGCCCCGCACCTCGGGATCTaGGTTAACATCCTCCCGGAACTGCTGGACCACTGCTTGCTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LLVLLPAGAAPHLGI*VNILPELLDHCLLF Trigger: GAACAGCAAGCAGTGGTCCAGCAGTTCCGGGAGGATGTTAACGCAGATCCCGAGGTGCGGGGCTGCTCCAGCTGGCAGGAGTACAAGGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS GCA 90 bp | TCGGGATCTGCGTTAACATCCTCCCGGAACTGCTGGACCACTGCTTaGTGTTCCCGGTCTCTACGGGAGAGCTTCTCCCTCCGCTGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SGSALTSSRNCWTTA*CSRSLRESFSLRWF Trigger: GAACCAGCGGAGGGAGAAGCTCTCCCGTAGAGACCGGGAACAGCAAGCAGTGGTCCAGCAGTTCCGGGAGGATGTTAACGCAGATCCCGA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS CCA 90 bp | GCTCTGAGGACCCCAGGAACTGCAAGGGGAGCTCTGAGCCCTGCCTaGGGCTTGAGTCCTGAGACTTCTCCTCTGGGTATTGGCTACTCT | + |
|
Preference number: 5 (lower is better) Translates to: ALRTPGTARGALSPA*GLSPETSPLGIGYS Trigger: AGAGTAGCCAATACCCAGAGGAGAAGTCTCAGGACTCAAGCCCCAGGCAGGGCTCAGAGCTCCCCTTGCAGTTCCTGGGGTCCTCAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 |
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| CDS CCA 90 bp | CTCAGCATCTGTCCCTCGCCCAATGACATTGGCTGGGAGCAGCTCTaGGGCTGGAGCAGGCAGGAAAGTGTGGCGACTATCAGAGGCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LSICPSPNDIGWEQL*GWSRQESVATIRGH Trigger: ATGGCCTCTGATAGTCGCCACACTTTCCTGCCTGCTCCAGCCCCAGAGCTGCTCCCAGCCAATGTCATTGGGCGAGGGACAGATGCTGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 |
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| CDS CCA 90 bp | ACTGCTTGCTGTTCCCGGTCTCTACGGGAGAGCTTCTCCCTCCGCTaGTTCAGCTTTTGGCACCAGGACTCAGCATCTGTCCCTCGCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TACCSRSLRESFSLR*FSFWHQDSASVPRP Trigger: TGGGCGAGGGACAGATGCTGAGTCCTGGTGCCAAAAGCTGAACCAGCGGAGGGAGAAGCTCTCCCGTAGAGACCGGGAACAGCAAGCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS-3UTR CAA 90 bp | CCTACAAACAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCACAGCTGCCACAGCTCTaGGCGACACAGGCGCAGCCG | + |
|
Preference number: 5 (lower is better) Translates to: PTNRRHLGSQTPMAWTVPQLPQL*ATQAQP Trigger: CGGCTGCGCCTGTGTCGCCAAGAGCTGTGGCAGCTG...TGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTGTTTGTAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CAA 90 bp | GGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCCTTCTCCTCTGGGTATaGGCTACTCTGGTCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GRHCQAALPGSGLESTVALLLWV*ATLVTG Trigger: GCCTGTGACCAGAGTAGCCAATACCCAGAGGAGAAG...GGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CAA 90 bp | GCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTGTGCCGCTGGTTCAGCTTTaGGCACCAGGACTCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: AALPGSGLESTVARQEGVPLVQL*APGLSI Trigger: GATGCTGAGTCCTGGTGCCAAAAGCTGAACCAGCGG...CACACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS CCA 90 bp | TCCCGGTCTCTACGGGAGAGCTTCTCCCTCCGCTGGTTCAGCTTTTaGCACCAGGACTCAGCATCTGTCCCTCGCCCAATGACATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: SRSLRESFSLRWFSF*HQDSASVPRPMTLA Trigger: AGCCAATGTCATTGGGCGAGGGACAGATGCTGAGTCCTGGTGCCAAAAGCTGAACCAGCGGAGGGAGAAGCTCTCCCGTAGAGACCGGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS-3UTR CAA 90 bp | CAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACAGTGGCCAGGCAAGAGGGTCAGCTGGTATGCCTCTaGGATAGACAGTGGGAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: QAALPGSGLESTVARQEGQLVCL*DRQWEV Trigger: GACCTCCCACTGTCTATCCAAGAGGCATACCAGCTG...ACCCTCTTGCCTGGCCACTGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CAA 90 bp | TGGCACGAAGCAAGCACCCCCTTGAATAAAGGCACAGTCCTTTCTCCTAACCCATCCGGGAGGAAGTCCTaGGGGCCATGCGACCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: WHEASTPLNKGTVLSPNPSGRKS*GPCDRC Trigger: ACAGCGGTCGCATGGCCCCAAGGACTTCCTCCCGGA...TGGGTTAGGAGAAAGGACTGTGCCTTTATTCAAGGGGGTGCTTGCTTCGTGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CAA 90 bp | CCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGAGTCCTATAAGCCCTGCCTGGGGCTaGAGTCCTGAGACTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: PRITDPNGLDGSIQVSPISPAWG*SPETSP Trigger: AGGAGAAGTCTCAGGACTCAAGCCCCAGGCAGGGCT...TATAGGACTCACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
||
| CDS-3UTR CAA 90 bp | GGGTGGGGGCGTCACTGTCAGGCAGCACTTCCAGGCAGTGGGCTTGAAAGCACACTATCAGAGGCCATGTaGGGGAATGAGATCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: GWGRHCQAALPGSGLESTLSEAM*GNEICS Trigger: TGAGCAGATCTCATTCCCCAACATGGCCTCTGATAG...TGTGCTTTCAAGCCCACTGCCTGGAAGTGCTGCCTGACAGTGACGCCCCCACCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CAA 90 bp | CAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGCCGCTGGTTCAGCTTTaGGCACCAGGACTCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: QKTPRITDPNGLDGSIQVPLVQL*APGLSI Trigger: GATGCTGAGTCCTGGTGCCAAAAGCTGAACCAGCGG...CACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS TCA 90 bp | CAGATACAAAGCCTCTTCGGGGTGAAGTCGCTGCCGTCCTTCCTCTaGGTAGCCCATGGTCTGCCAGAATTTCCCCGCAGGAGACGTCAA | + |
|
Preference number: 5 (lower is better) Translates to: QIQSLFGVKSLPSFL*VAHGLPEFPRRRRQ Trigger: TTGACGTCTCCTGCGGGGAAATTCTGGCAGACCATGGGCTACTCAGAGGAAGGACGGCAGCGACTTCACCCCGAAGAGGCTTTGTATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CAA 90 bp | ACAGTGGCCAGGCAAGAGGGTGTGCACGTCCCTACAAACAGAAGACACCTAGGACCGCTGGTTCAGCTTTaGGCACCAGGACTCAGCATC | + |
|
Preference number: 5 (lower is better) Translates to: TVARQEGVHVPTNRRHLGPLVQL*APGLSI Trigger: GATGCTGAGTCCTGGTGCCAAAAGCTGAACCAGCGG...TCCTAGGTGTCTTCTGTTTGTAGGGACGTGCACACCCTCTTGCCTGGCCACTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 |
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| CDS TCA 90 bp | GAGCAAAGATCAGGGGAACATCCCCACTCTGGTAGGTCAAGCACTTaGGGCTGCAGAGGTCTGGGACAGGGTCATCAAACCGGTAACCTC | + |
|
Preference number: 5 (lower is better) Translates to: EQRSGEHPHSGRSST*GCRGLGQGHQTGNL Trigger: GAGGTTACCGGTTTGATGACCCTGTCCCAGACCTCTGCAGCCTCAAGTGCTTGACCTACCAGAGTGGGGATGTTCCCCTGATCTTTGCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000106481.9 |
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| CDS CCA 90 bp | AAGGTGTGTCGTCTGCAGTACAGAGATATGTTGCAGGACCGCGGCTaGACAATCGGCTTTATCAGGGTCGAGCAAGGGGGTAACGGACTG | + |
|
Preference number: 5 (lower is better) Translates to: KVCRLQYRDMLQDRG*TIGFIRVEQGGNGL Trigger: CAGTCCGTTACCCCCTTGCTCGACCCTGATAAAGCCGATTGTCCAGCCGCGGTCCTGCAACATATCTCTGTACTGCAGACGACACACCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 ENSMUST00000157061.2 |
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| CDS CCA 90 bp | AGACTCATTTCAGGGTCTGGCAAACTGGTGGCAGGGTTCAAGGGATaGGCTGGCAGCAGCCAGAGGCACTGCTCAATCATCTCATACCCA | + |
|
Preference number: 5 (lower is better) Translates to: RLISGSGKLVAGFKG*AGSSQRHCSIISYP Trigger: TGGGTATGAGATGATTGAGCAGTGCCTCTGGCTGCTGCCAGCCCATCCCTTGAACCCTGCCACCAGTTTGCCAGACCCTGAAATGAGTCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157061.2 |
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| CDS-3UTR CAA 90 bp | CCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGAGTCCTATACTTCTCCTCTGGGTATaGGCTACTCTGGTCACAGGC | + |
|
Preference number: 5 (lower is better) Translates to: PRITDPNGLDGSIQVSPILLLWV*ATLVTG Trigger: GCCTGTGACCAGAGTAGCCAATACCCAGAGGAGAAG...TATAGGACTCACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS TCA 90 bp | TTTTTCGGAACGTCGCCACAGCGTCAGCCTGGTAAACATCGAAGCTaGTCTGCAAGCCTCCAGACTTCTCCAGCAGCCGGTAACCTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: FFGTSPQRQPGKHRS*SASLQTSPAAGNLH Trigger: ATGGAGGTTACCGGCTGCTGGAGAAGTCTGGAGGCTTGCAGATCAGCTTCGATGTTTACCAGGCTGACGCTGTGGCGACGTTCCGAAAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000154304.8 ENSMUST00000157061.2 |
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| CDS CCA 90 bp | GGTGTCCTCTGTCAGCAGCAGCTGGTATGCCTCTTGGATAGACAGTaGGAGGTCTTGGTAGAAGAGCTGAATCGAACCACACTCCAGCAG | + |
|
Preference number: 5 (lower is better) Translates to: GVLCQQQLVCLLDRQ*EVLVEELNRTTLQQ Trigger: CTGCTGGAGTGTGGTTCGATTCAGCTCTTCTACCAAGACCTCCCACTGTCTATCCAAGAGGCATACCAGCTGCTGCTGACAGAGGACACC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS CCA 90 bp | AACATCCCCACTCTGGTAGGTCAAGCACTTGAGGCTGCAGAGGTCTaGGACAGGGTCATCAAACCGGTAACCTCCATCAGCAAGGTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: NIPTLVGQALEAAEV*DRVIKPVTSISKVC Trigger: ACACACCTTGCTGATGGAGGTTACCGGTTTGATGACCCTGTCCCAGACCTCTGCAGCCTCAAGTGCTTGACCTACCAGAGTGGGGATGTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000106481.9 |
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| CDS CCA 90 bp | CATTTCAGGGTCTGGCAAACTGGTGGCAGGGTTCAAGGGATGGGCTaGCAGCAGCCAGAGGCACTGCTCAATCATCTCATACCCACTAAT | + |
|
Preference number: 5 (lower is better) Translates to: HFRVWQTGGRVQGMG*QQPEALLNHLIPTN Trigger: ATTAGTGGGTATGAGATGATTGAGCAGTGCCTCTGGCTGCTGCCAGCCCATCCCTTGAACCCTGCCACCAGTTTGCCAGACCCTGAAATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157061.2 |
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| CDS-3UTR CAA 90 bp | AATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCTGAAAACAAGTTCCGGGAGGAAGTCCTaGGGGCCATGCGACCGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NKGTVLSPNPSPGPLKTSSGRKS*GPCDRC Trigger: ACAGCGGTCGCATGGCCCCAAGGACTTCCTCCCGGA...ACTTGTTTTCAGAGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CAA 90 bp | AAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCTGAAAACAAGTCCTAGCCCTGCCTGGGGCTaGAGTCCTGAGACTTCTCCT | + |
|
Preference number: 5 (lower is better) Translates to: KGTVLSPNPSPGPLKTSPSPAWG*SPETSP Trigger: AGGAGAAGTCTCAGGACTCAAGCCCCAGGCAGGGCT...AGGACTTGTTTTCAGAGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CAA 90 bp | CCTAGGATCACAGACCCCAATGGCCTGGACGGTTCCATCCAGGTGAGTCCTATAGAGTTCTGCAGGACCTaGGGCTTCTTATTAACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PRITDPNGLDGSIQVSPIEFCRT*GFLLTD Trigger: GTCTGTTAATAAGAAGCCCAAGGTCCTGCAGAACTC...TATAGGACTCACCTGGATGGAACCGTCCAGGCCATTGGGGTCTGTGATCCTAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS GCA 90 bp | GTACTGCAGGAAACTCAAGGTGTCCTCTGTCAGCAGCAGCTGGTATaGCTCTTGGATAGACAGTGGGAGGTCTTGGTAGAAGAGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: VLQETQGVLCQQQLV*LLDRQWEVLVEELN Trigger: ATTCAGCTCTTCTACCAAGACCTCCCACTGTCTATCCAAGAGGCATACCAGCTGCTGCTGACAGAGGACACCTTGAGTTTCCTGCAGTAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 |
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| CDS GCA 90 bp | AGGAAAGTGTGGCGACTATCAGAGGCCATGTTGGGGAATGAGATCTaGTCAAAGTTCCAGCGTAGCTTAGGGGTTCCCTTAGCTCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: RKVWRLSEAMLGNEI*SKFQRSLGVPLAPF Trigger: GAATGGAGCTAAGGGAACCCCTAAGCTACGCTGGAACTTTGAGCAGATCTCATTCCCCAACATGGCCTCTGATAGTCGCCACACTTTCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 |
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| CDS-3UTR CAA 90 bp | GTCCCTACAAACAGAAGACACCTAGGATCACAGACCCCAATGGCCTGGACGGTTGAGTTCTGCAGGACCTaGGGCTTCTTATTAACAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VPTNRRHLGSQTPMAWTVEFCRT*GFLLTD Trigger: GTCTGTTAATAAGAAGCCCAAGGTCCTGCAGAACTC...AACCGTCCAGGCCATTGGGGTCTGTGATCCTAGGTGTCTTCTGTTTGTAGGGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS-3UTR CAA 90 bp | AATAAAGGCACAGTCCTTTCTCCTAACCCAAGTCCTGGGCCTCTGAAAACAAGTCTATCAGAGGCCATGTaGGGGAATGAGATCTGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: NKGTVLSPNPSPGPLKTSLSEAM*GNEICS Trigger: TGAGCAGATCTCATTCCCCAACATGGCCTCTGATAG...ACTTGTTTTCAGAGGCCCAGGACTTGGGTTAGGAGAAAGGACTGTGCCTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS CCA 72 bp | TCCACGCGCTCCTCCGCCAGCAGCTGCCACAGCTCTTaGCGACACAGGCGCAGCCGCTCCGCCTGGGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: STRSSASSCHSS*RHRRSRSAWAS Trigger: GGAGGCCCAGGCGGAGCGGCTGCGCCTGTGTCGCCAAGAGCTGTGGCAGCTGCTGGCGGAGGAGCGCGTGGA 74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS CAA 90 bp | CGCAGCCGCTCCGCCTGGGCCTCCGAGCCGTCCGGGAGGAAGTCCTaGGGGCCATGCGACCGCTGTGGTAGCTTCTGGGACCGCGAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RSRSAWASEPSGRKS*GPCDRCGSFWDRER Trigger: GCGCTCGCGGTCCCAGAAGCTACCACAGCGGTCGCATGGCCCCAAGGACTTCCTCCCGGACGGCTCGGAGGCCCAGGCGGAGCGGCTGCG 73% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS CCA 72 bp | CACAGCTCTTGGCGACACAGGCGCAGCCGCTCCGCCTaGGCCTCCGAGCCGTCCGGGAGGAAGTCCTTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: HSSWRHRRSRSA*ASEPSGRKSLG Trigger: CCCCAAGGACTTCCTCCCGGACGGCTCGGAGGCCCAGGCGGAGCGGCTGCGCCTGTGTCGCCAAGAGCTGTG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS GCA 72 bp | GCCTCCGAGCCGTCCGGGAGGAAGTCCTTGGGGCCATaGGACCGCTGTGGTAGCTTCTGGGACCGCGAGCGC | + |
|
Preference number: 6 (lower is better) Translates to: ASEPSGRKSLGP*DRCGSFWDRER Trigger: GCGCTCGCGGTCCCAGAAGCTACCACAGCGGTCGCATGGCCCCAAGGACTTCCTCCCGGACGGCTCGGAGGC 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS CAA 72 bp | TCCGCCTGGGCCTCCGAGCCGTCCGGGAGGAAGTCCTaGGGGCCATGCGACCGCTGTGGTAGCTTCTGGGAC | + |
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Preference number: 6 (lower is better) Translates to: SAWASEPSGRKS*GPCDRCGSFWD Trigger: GTCCCAGAAGCTACCACAGCGGTCGCATGGCCCCAAGGACTTCCTCCCGGACGGCTCGGAGGCCCAGGCGGA 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS GCA 72 bp | GGAGGCCGGGGCTGGCTCTTCTGCGTCTGTCGCCTCTaGAGCAGCTCCTTGTACTCCTGCCAGCTGGAGCAG | + |
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Preference number: 6 (lower is better) Translates to: GGRGWLFCVCRL*SSSLYSCQLEQ Trigger: CTGCTCCAGCTGGCAGGAGTACAAGGAGCTGCTGCAGAGGCGACAGACGCAGAAGAGCCAGCCCCGGCCTCC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 ENSMUST00000157061.2 |
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| CDS CCA 72 bp | GTAACGGACTGGCCCCATAGGTGTGGAGGCCGGGGCTaGCTCTTCTGCGTCTGTCGCCTCTGCAGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: VTDWPHRCGGRG*LFCVCRLCSSS Trigger: GGAGCTGCTGCAGAGGCGACAGACGCAGAAGAGCCAGCCCCGGCCTCCACACCTATGGGGCCAGTCCGTTAC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 ENSMUST00000157061.2 |
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| CDS GCA 72 bp | CTCCTGCCAGCTGGAGCAGCCCCGCACCTCGGGATCTaGGTTAACATCCTCCCGGAACTGCTGGACCACTGC | + |
|
Preference number: 6 (lower is better) Translates to: LLPAGAAPHLGI*VNILPELLDHC Trigger: GCAGTGGTCCAGCAGTTCCGGGAGGATGTTAACGCAGATCCCGAGGTGCGGGGCTGCTCCAGCTGGCAGGAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS TCA 72 bp | AGCCTCTTCGGGGTGAAGTCGCTGCCGTCCTTCCTCTaGGTAGCCCATGGTCTGCCAGAATTTCCCCGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: SLFGVKSLPSFL*VAHGLPEFPRR Trigger: CCTGCGGGGAAATTCTGGCAGACCATGGGCTACTCAGAGGAAGGACGGCAGCGACTTCACCCCGAAGAGGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS GCA 72 bp | CGCACCTCGGGATCTGCGTTAACATCCTCCCGGAACTaGTGGACCACTGCTTGCTGTTCCCGGTCTCTACGG | + |
|
Preference number: 6 (lower is better) Translates to: RTSGSALTSSRN*WTTACCSRSLR Trigger: CCGTAGAGACCGGGAACAGCAAGCAGTGGTCCAGCAGTTCCGGGAGGATGTTAACGCAGATCCCGAGGTGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS CAA 90 bp | CTCGGGATCTGCGTTAACATCCTCCCGGAACTGCTGGACCACTGCTaGCTGTTCCCGGTCTCTACGGGAGAGCTTCTCCCTCCGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: LGICVNILPELLDHC*LFPVSTGELLPPLV Trigger: AACCAGCGGAGGGAGAAGCTCTCCCGTAGAGACCGGGAACAGCAAGCAGTGGTCCAGCAGTTCCGGGAGGATGTTAACGCAGATCCCGAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS CCA 72 bp | ACCCCAGGAACTGCAAGGGGAGCTCTGAGCCCTGCCTaGGGCTTGAGTCCTGAGACTTCTCCTCTGGGTATT | + |
|
Preference number: 6 (lower is better) Translates to: TPGTARGALSPA*GLSPETSPLGI Trigger: AATACCCAGAGGAGAAGTCTCAGGACTCAAGCCCCAGGCAGGGCTCAGAGCTCCCCTTGCAGTTCCTGGGGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 |
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| CDS CCA 72 bp | CTACGGGAGAGCTTCTCCCTCCGCTGGTTCAGCTTTTaGCACCAGGACTCAGCATCTGTCCCTCGCCCAATG | + |
|
Preference number: 6 (lower is better) Translates to: LRESFSLRWFSF*HQDSASVPRPM Trigger: CATTGGGCGAGGGACAGATGCTGAGTCCTGGTGCCAAAAGCTGAACCAGCGGAGGGAGAAGCTCTCCCGTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS CCA 72 bp | ACCTCGGGATCTGCGTTAACATCCTCCCGGAACTGCTaGACCACTGCTTGCTGTTCCCGGTCTCTACGGGAG | + |
|
Preference number: 6 (lower is better) Translates to: TSGSALTSSRNC*TTACCSRSLRE Trigger: CTCCCGTAGAGACCGGGAACAGCAAGCAGTGGTCCAGCAGTTCCGGGAGGATGTTAACGCAGATCCCGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS CAA 72 bp | GCCAGGCTGACGGGCGGCAGGGAGTTCTGCAGGACCTaGGGCTTCTTATTAACAGACCGACAGCTGGAACTC | + |
|
Preference number: 6 (lower is better) Translates to: ARLTGGREFCRT*GFLLTDRQLEL Trigger: GAGTTCCAGCTGTCGGTCTGTTAATAAGAAGCCCAAGGTCCTGCAGAACTCCCTGCCGCCCGTCAGCCTGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS CAA 90 bp | TTCCCGGTCTCTACGGGAGAGCTTCTCCCTCCGCTGGTTCAGCTTTaGGCACCAGGACTCAGCATCTGTCCCTCGCCCAATGACATTGGC | + |
|
Preference number: 6 (lower is better) Translates to: FPVSTGELLPPLVQL*APGLSICPSPNDIG Trigger: GCCAATGTCATTGGGCGAGGGACAGATGCTGAGTCCTGGTGCCAAAAGCTGAACCAGCGGAGGGAGAAGCTCTCCCGTAGAGACCGGGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS TCA 72 bp | ACGTCGCCACAGCGTCAGCCTGGTAAACATCGAAGCTaGTCTGCAAGCCTCCAGACTTCTCCAGCAGCCGGT | + |
|
Preference number: 6 (lower is better) Translates to: TSPQRQPGKHRS*SASLQTSPAAG Trigger: ACCGGCTGCTGGAGAAGTCTGGAGGCTTGCAGATCAGCTTCGATGTTTACCAGGCTGACGCTGTGGCGACGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000154304.8 ENSMUST00000157061.2 |
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| CDS CCA 72 bp | GGTGAAGTCGCTGCCGTCCTTCCTCTGAGTAGCCCATaGTCTGCCAGAATTTCCCCGCAGGAGACGTCAACT | + |
|
Preference number: 6 (lower is better) Translates to: GEVAAVLPLSSP*SARISPQETST Trigger: AGTTGACGTCTCCTGCGGGGAAATTCTGGCAGACCATGGGCTACTCAGAGGAAGGACGGCAGCGACTTCACC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS CCA 72 bp | TGTTCCCGGTCTCTACGGGAGAGCTTCTCCCTCCGCTaGTTCAGCTTTTGGCACCAGGACTCAGCATCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: CSRSLRESFSLR*FSFWHQDSASV Trigger: GACAGATGCTGAGTCCTGGTGCCAAAAGCTGAACCAGCGGAGGGAGAAGCTCTCCCGTAGAGACCGGGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS CCA 72 bp | TGCACCTCAGACTCATTTCAGGGTCTGGCAAACTGGTaGCAGGGTTCAAGGGATGGGCTGGCAGCAGCCAGA | + |
|
Preference number: 6 (lower is better) Translates to: CTSDSFQGLANW*QGSRDGLAAAR Trigger: TCTGGCTGCTGCCAGCCCATCCCTTGAACCCTGCCACCAGTTTGCCAGACCCTGAAATGAGTCTGAGGTGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157061.2 |
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| CDS CAA 72 bp | TCTACGGGAGAGCTTCTCCCTCCGCTGGTTCAGCTTTaGGCACCAGGACTCAGCATCTGTCCCTCGCCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: STGELLPPLVQL*APGLSICPSPN Trigger: ATTGGGCGAGGGACAGATGCTGAGTCCTGGTGCCAAAAGCTGAACCAGCGGAGGGAGAAGCTCTCCCGTAGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS CAA 72 bp | TGCGTTAACATCCTCCCGGAACTGCTGGACCACTGCTaGCTGTTCCCGGTCTCTACGGGAGAGCTTCTCCCT | + |
|
Preference number: 6 (lower is better) Translates to: CVNILPELLDHC*LFPVSTGELLP Trigger: AGGGAGAAGCTCTCCCGTAGAGACCGGGAACAGCAAGCAGTGGTCCAGCAGTTCCGGGAGGATGTTAACGCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS CAA 72 bp | GCCAGGCTGACGGGCGGCAGGGAGTTCTGCAGGACCTaGGGCTTCTTATTAACAGACCTTAGCTGGAACCGA | + |
|
Preference number: 6 (lower is better) Translates to: ARLTGGREFCRT*GFLLTDLSWNR Trigger: TCGGTTCCAGCTAAGGTCTGTTAATAAGAAGCCCAAGGTCCTGCAGAACTCCCTGCCGCCCGTCAGCCTGGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000136343.2 |
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| CDS TCA 72 bp | TCAGGGGAACATCCCCACTCTGGTAGGTCAAGCACTTaGGGCTGCAGAGGTCTGGGACAGGGTCATCAAACC | + |
|
Preference number: 6 (lower is better) Translates to: SGEHPHSGRSST*GCRGLGQGHQT Trigger: GGTTTGATGACCCTGTCCCAGACCTCTGCAGCCTCAAGTGCTTGACCTACCAGAGTGGGGATGTTCCCCTGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS GCA 72 bp | ATCTGCGTTAACATCCTCCCGGAACTGCTGGACCACTaGTTGCTGTTCCCGGTCTCTACGGGAGAGCTTCTC | + |
|
Preference number: 6 (lower is better) Translates to: ICVNILPELLDH*LLFPVSTGELL Trigger: GAGAAGCTCTCCCGTAGAGACCGGGAACAGCAAGCAGTGGTCCAGCAGTTCCGGGAGGATGTTAACGCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 |
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| CDS CCA 72 bp | CGTCTGCAGTACAGAGATATGTTGCAGGACCGCGGCTaGACAATCGGCTTTATCAGGGTCGAGCAAGGGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RLQYRDMLQDRG*TIGFIRVEQGG Trigger: ACCCCCTTGCTCGACCCTGATAAAGCCGATTGTCCAGCCGCGGTCCTGCAACATATCTCTGTACTGCAGACG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 ENSMUST00000154304.8 ENSMUST00000157061.2 |
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| CDS CCA 72 bp | GTCTGGCAAACTGGTGGCAGGGTTCAAGGGATGGGCTaGCAGCAGCCAGAGGCACTGCTCAATCATCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: VWQTGGRVQGMG*QQPEALLNHLI Trigger: TATGAGATGATTGAGCAGTGCCTCTGGCTGCTGCCAGCCCATCCCTTGAACCCTGCCACCAGTTTGCCAGAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157061.2 |
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| CDS GCA 72 bp | GGGTTCAAGGGATGGGCTGGCAGCAGCCAGAGGCACTaGTCAATCATCTCATACCCACTAATGCACATTCGC | + |
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Preference number: 6 (lower is better) Translates to: GFKGWAGSSQRH*SIISYPLMHIR Trigger: GCGAATGTGCATTAGTGGGTATGAGATGATTGAGCAGTGCCTCTGGCTGCTGCCAGCCCATCCCTTGAACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157061.2 |
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| CDS CCA 72 bp | CTTAACCCTTCTGCACCTCAGACTCATTTCAGGGTCTaGCAAACTGGTGGCAGGGTTCAAGGGATGGGCTGG | + |
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Preference number: 6 (lower is better) Translates to: LNPSAPQTHFRV*QTGGRVQGMGW Trigger: CCAGCCCATCCCTTGAACCCTGCCACCAGTTTGCCAGACCCTGAAATGAGTCTGAGGTGCAGAAGGGTTAAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000157061.2 |
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| CDS GCA 72 bp | TCAGCAAGGTGTGTCGTCTGCAGTACAGAGATATGTTaGAGGACCGCGGCTGGACAATCGGCTTTATCAGGG | + |
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Preference number: 6 (lower is better) Translates to: SARCVVCSTEIC*RTAAGQSALSG Trigger: CCCTGATAAAGCCGATTGTCCAGCCGCGGTCCTGCAACATATCTCTGTACTGCAGACGACACACCTTGCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 ENSMUST00000157061.2 |
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| CDS CCA 72 bp | TGCAGGAAACTCAAGGTGTCCTCTGTCAGCAGCAGCTaGTATGCCTCTTGGATAGACAGTGGGAGGTCTTGG | + |
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Preference number: 6 (lower is better) Translates to: CRKLKVSSVSSS*YASWIDSGRSW Trigger: CCAAGACCTCCCACTGTCTATCCAAGAGGCATACCAGCTGCTGCTGACAGAGGACACCTTGAGTTTCCTGCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 |
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| CDS CAA 72 bp | CAAGGTGTCCTCTGTCAGCAGCAGCTGGTATGCCTCTaGGATAGACAGTGGGAGGTCTTGGTAGAAGAGCTG | + |
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Preference number: 6 (lower is better) Translates to: QGVLCQQQLVCL*DRQWEVLVEEL Trigger: CAGCTCTTCTACCAAGACCTCCCACTGTCTATCCAAGAGGCATACCAGCTGCTGCTGACAGAGGACACCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 |
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| CDS CAA 72 bp | GCAGGCAGGAAAGTGTGGCGACTATCAGAGGCCATGTaGGGGAATGAGATCTGCTCAAAGTTCCAGCGTAGC | + |
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Preference number: 6 (lower is better) Translates to: AGRKVWRLSEAM*GNEICSKFQRS Trigger: GCTACGCTGGAACTTTGAGCAGATCTCATTCCCCAACATGGCCTCTGATAGTCGCCACACTTTCCTGCCTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 |
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| CDS CAA 90 bp | GTAACCTCCATCAGCAAGGTGTGTCGTCTGCAGTACAGAGATATGTaGCAGGACCGCGGCTGGACAATCGGCTTTATCAGGGTCGAGCAA | + |
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Preference number: 6 (lower is better) Translates to: VTSISKVCRLQYRDM*QDRGWTIGFIRVEQ Trigger: TTGCTCGACCCTGATAAAGCCGATTGTCCAGCCGCGGTCCTGCAACATATCTCTGTACTGCAGACGACACACCTTGCTGATGGAGGTTAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 ENSMUST00000157061.2 |
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| CDS CCA 72 bp | CAGGCAGGAAAGTGTGGCGACTATCAGAGGCCATGTTaGGGAATGAGATCTGCTCAAAGTTCCAGCGTAGCT | + |
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Preference number: 6 (lower is better) Translates to: QAGKCGDYQRPC*GMRSAQSSSVA Trigger: AGCTACGCTGGAACTTTGAGCAGATCTCATTCCCCAACATGGCCTCTGATAGTCGCCACACTTTCCTGCCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 |
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| CDS CAA 72 bp | CAGCTGGTATGCCTCTTGGATAGACAGTGGGAGGTCTaGGTAGAAGAGCTGAATCGAACCACACTCCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: QLVCLLDRQWEV*VEELNRTTLQQ Trigger: CTGCTGGAGTGTGGTTCGATTCAGCTCTTCTACCAAGACCTCCCACTGTCTATCCAAGAGGCATACCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS CAA 72 bp | ATCAGCAAGGTGTGTCGTCTGCAGTACAGAGATATGTaGCAGGACCGCGGCTGGACAATCGGCTTTATCAGG | + |
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Preference number: 6 (lower is better) Translates to: ISKVCRLQYRDM*QDRGWTIGFIR Trigger: CCTGATAAAGCCGATTGTCCAGCCGCGGTCCTGCAACATATCTCTGTACTGCAGACGACACACCTTGCTGAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000154304.8 ENSMUST00000157061.2 |
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| CDS CAA 90 bp | CAGGAAACTCAAGGTGTCCTCTGTCAGCAGCAGCTGGTATGCCTCTaGGATAGACAGTGGGAGGTCTTGGTAGAAGAGCTGAATCGAACC | + |
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Preference number: 6 (lower is better) Translates to: QETQGVLCQQQLVCL*DRQWEVLVEELNRT Trigger: GGTTCGATTCAGCTCTTCTACCAAGACCTCCCACTGTCTATCCAAGAGGCATACCAGCTGCTGCTGACAGAGGACACCTTGAGTTTCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 |
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| CDS CAA 90 bp | TGTCAGCAGCAGCTGGTATGCCTCTTGGATAGACAGTGGGAGGTCTaGGTAGAAGAGCTGAATCGAACCACACTCCAGCAGATACAAAGC | + |
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Preference number: 6 (lower is better) Translates to: CQQQLVCLLDRQWEV*VEELNRTTLQQIQS Trigger: GCTTTGTATCTGCTGGAGTGTGGTTCGATTCAGCTCTTCTACCAAGACCTCCCACTGTCTATCCAAGAGGCATACCAGCTGCTGCTGACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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| CDS GCA 72 bp | GAAACTCAAGGTGTCCTCTGTCAGCAGCAGCTGGTATaGCTCTTGGATAGACAGTGGGAGGTCTTGGTAGAA | + |
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Preference number: 6 (lower is better) Translates to: ETQGVLCQQQLV*LLDRQWEVLVE Trigger: TTCTACCAAGACCTCCCACTGTCTATCCAAGAGGCATACCAGCTGCTGCTGACAGAGGACACCTTGAGTTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 ENSMUST00000136343.2 |
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| CDS CCA 72 bp | TGTCAGCAGCAGCTGGTATGCCTCTTGGATAGACAGTaGGAGGTCTTGGTAGAAGAGCTGAATCGAACCACA | + |
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Preference number: 6 (lower is better) Translates to: CQQQLVCLLDRQ*EVLVEELNRTT Trigger: TGTGGTTCGATTCAGCTCTTCTACCAAGACCTCCCACTGTCTATCCAAGAGGCATACCAGCTGCTGCTGACA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000021134.10 ENSMUST00000106481.9 |
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