Pregenerated sensors for TSC22D4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029723Ensembl transcript IDs: ENSMUST00000031738.5, ENSMUST00000100539.10, ENSMUST00000100540.10, ENSMUST00000110983.3, ENSMUST00000110985.2, ENSMUST00000141733.8
Found 255 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGCAGCCTGCCAGGCCTGGCAAGGGCACCATGTGCCCTAAGAGCCTaGCCCACACCCAGCCTTAAGACAAGGGGCCCATTCAGGGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: GSLPGLARAPCALRA*PTPSLKTRGPFRAP Trigger: AGGAGCCCTGAATGGGCCCCTTGTCTTAAGGCTGGGTGTGGGCCAGGCTCTTAGGGCACATGGTGCCCTTGCCAGGCCTGGCAGGCTGCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR TCA 90 bp | CCTGAGGACTCTGGGGAGACCGAGCGGGATGGGACAGGCCAATATTaGGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCATGGGC | + |
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Preference number: 1 (lower is better) Translates to: PEDSGETERDGTGQY*AFNSHPWALELGMG Trigger: GCCCATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTCCCATCCCGCTCGGTCTCCCCAGAGTCCTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000141733.8 |
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| 3UTR GCA 90 bp | TTAGTGCTGTTCCCTTTGCCCCCACTAGGTGGGGCCCTTCTTGGCTaGCTCAGTCGGTCTGGGAGAGAAGGAGGAGCTTGCTCACCCACT | + |
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Preference number: 1 (lower is better) Translates to: LVLFPLPPLGGALLG*LSRSGREGGACSPT Trigger: AGTGGGTGAGCAAGCTCCTCCTTCTCTCCCAGACCGACTGAGGCAGCCAAGAAGGGCCCCACCTAGTGGGGGCAAAGGGAACAGCACTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR CCA 90 bp | TTCTCCTTCAAGGCTCTTAGTGCTGTTCCCTTTGCCCCCACTAGGTaGGGCCCTTCTTGGCTGCCTCAGTCGGTCTGGGAGAGAAGGAGG | + |
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Preference number: 1 (lower is better) Translates to: FSFKALSAVPFAPTR*GPSWLPQSVWERRR Trigger: CCTCCTTCTCTCCCAGACCGACTGAGGCAGCCAAGAAGGGCCCCACCTAGTGGGGGCAAAGGGAACAGCACTAAGAGCCTTGAAGGAGAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR TCA 90 bp | GGATCTGGGGCTCCCCTGCCTAAAGAGGACTTCGGGCATCATGTTTaGGGCCCTGCACTGGTTCAGAGTGACGGGAAGTATGGGAGGGAT | + |
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Preference number: 1 (lower is better) Translates to: GSGAPLPKEDFGHHV*GPALVQSDGKYGRD Trigger: ATCCCTCCCATACTTCCCGTCACTCTGAACCAGTGCAGGGCCTCAAACATGATGCCCGAAGTCCTCTTTAGGCAGGGGAGCCCCAGATCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110983.3 |
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| 3UTR TCA 90 bp | AGATACTGTCCATACACCCTCCCTTGGCAGAGGAGAGGGGGCACTTaGAGAGAACGGGGTGAGGCCTGCCAGGGAACCTCCAAATCTTTC | + |
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Preference number: 1 (lower is better) Translates to: RYCPYTLPWQRRGGT*RERGEACQGTSKSF Trigger: GAAAGATTTGGAGGTTCCCTGGCAGGCCTCACCCCGTTCTCTTCAAGTGCCCCCTCTCCTCTGCCAAGGGAGGGTGTATGGACAGTATCT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR TCA 90 bp | CAACTGAAGACTAAGGCCACGAGACCGTGGGTAAGGAGGAGGTGCTaGTTACACAAGCCTCGGTTGGGAGTCAGGGCCACCCCACAGATA | + |
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Preference number: 1 (lower is better) Translates to: QLKTKATRPWVRRRC*LHKPRLGVRATPQI Trigger: TATCTGTGGGGTGGCCCTGACTCCCAACCGAGGCTTGTGTAATCAGCACCTCCTCCTTACCCACGGTCTCGTGGCCTTAGTCTTCAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR CCA 90 bp | CAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTaGGCATGGGCATTAAAGCTACATAGGAAGAGGGGGCAGGCTGCC | + |
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Preference number: 1 (lower is better) Translates to: QANIEPSTPIPGHWS*AWALKLHRKRGQAA Trigger: GGCAGCCTGCCCCCTCTTCCTATGTAGCTTTAATGCCCATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
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| 3UTR CCA 90 bp | AATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCATaGGCATTAAAGCTACATAGGAAGAGGGGGCAGGCTGCCGGCACA | + |
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Preference number: 1 (lower is better) Translates to: NIEPSTPIPGHWSWA*ALKLHRKRGQAAGT Trigger: TGTGCCGGCAGCCTGCCCCCTCTTCCTATGTAGCTTTAATGCCCATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
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| 3UTR CCA 90 bp | CCCTGCCTAAAGAGGACTTCGGGCATCATGTTTGAGGCCCTGCACTaGTTCAGAGTGACGGGAAGTATGGGAGGGATGAGACCACATACG | + |
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Preference number: 1 (lower is better) Translates to: PCLKRTSGIMFEALH*FRVTGSMGGMRPHT Trigger: CGTATGTGGTCTCATCCCTCCCATACTTCCCGTCACTCTGAACCAGTGCAGGGCCTCAAACATGATGCCCGAAGTCCTCTTTAGGCAGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110983.3 |
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| 3UTR CCA 90 bp | ATGGGACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTaGAGTTGGGCATGGGCATTAAAGCTACATAGGAAGAGGGGGCAG | + |
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Preference number: 1 (lower is better) Translates to: MGQANIEPSTPIPGH*SWAWALKLHRKRGQ Trigger: CTGCCCCCTCTTCCTATGTAGCTTTAATGCCCATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTCCCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
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| 3UTR GCA 90 bp | GTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGTGTGCGCGAGGGCGTaGGTTGGGGACAGCATAACTACATACATAGCTAGACGCAGCAAC | + |
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Preference number: 1 (lower is better) Translates to: VCVCVCVCVFVCARA*VGDSITTYIARRSN Trigger: GTTGCTGCGTCTAGCTATGTATGTAGTTATGCTGTCCCCAACGCACGCCCTCGCGCACACAAACACACACACACACACACACACACACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR GCA 90 bp | CTTGCATTTGGGTCCTCAGCACCCTACACCCCAACTCTCCAATGCTaGATGTCTGTAATTCTAGTGGGGAAGCCGAGACTGAAGGATCCC | + |
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Preference number: 1 (lower is better) Translates to: LAFGSSAPYTPTLQC*MSVILVGKPRLKDP Trigger: GGGATCCTTCAGTCTCGGCTTCCCCACTAGAATTACAGACATGCAGCATTGGAGAGTTGGGGTGTAGGGTGCTGAGGACCCAAATGCAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR TCA 90 bp | GATGTGGCAGTATGGTCGAATGTCTCCTCACCAGTAGCTCTGGCCTaGTGGCCATTGAACCCTTCCTGTCAATCTTCCGTAAGAGTGAGG | + |
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Preference number: 1 (lower is better) Translates to: DVAVWSNVSSPVALA*WPLNPSCQSSVRVR Trigger: CCTCACTCTTACGGAAGATTGACAGGAAGGGTTCAATGGCCATCAGGCCAGAGCTACTGGTGAGGAGACATTCGACCATACTGCCACATC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| 3UTR TCA 90 bp | GGCATCCTTAGTAAGGACAGACCCTGTCTCAGAGAAGGTGAAAGGTaGAGAGTGACACCCAGGTTTATCCTCTGGTCTCTCCATGTGGGC | + |
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Preference number: 1 (lower is better) Translates to: GILSKDRPCLREGER*RVTPRFILWSLHVG Trigger: GCCCACATGGAGAGACCAGAGGATAAACCTGGGTGTCACTCTTCACCTTTCACCTTCTCTGAGACAGGGTCTGTCCTTACTAAGGATGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR GCA 90 bp | ACCACCTATAACTCCTGTTCTAGGGGATCCAACGCAATGAGGACTTaGATTTGGGTCCTCAGCACCCTACACCCCAACTCTCCAATGCTG | + |
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Preference number: 1 (lower is better) Translates to: TTYNSCSRGSNAMRT*IWVLSTLHPNSPML Trigger: CAGCATTGGAGAGTTGGGGTGTAGGGTGCTGAGGACCCAAATGCAAGTCCTCATTGCGTTGGATCCCCTAGAACAGGAGTTATAGGTGGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR CCA 90 bp | GGACCAAGACCATTCCCAAGCCATTTTCTGGCATCTTCTCCAGGGTaGACCTGGGATCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: GPRPFPSHFLASSPG*TWDLVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACAAGATCCCAGGTCCACCCTGGAGAAGATGCCAGAAAATGGCTTGGGAATGGTCTTGGTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR TCA 90 bp | CCCAGGTTTATCCTCTGGTCTCTCCATGTGGGCAATAGCACAGAGTaGACACTCGAATCACACAACAATGAACCAGGGCCAGCATACTGG | + |
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Preference number: 1 (lower is better) Translates to: PRFILWSLHVGNSTE*TLESHNNEPGPAYW Trigger: CCAGTATGCTGGCCCTGGTTCATTGTTGTGTGATTCGAGTGTTCACTCTGTGCTATTGCCCACATGGAGAGACCAGAGGATAAACCTGGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR TCA 90 bp | GGTAGTTTACCACCTATAACTCCTGTTCTAGGGGATCCAACGCAATaGGGACTTGCATTTGGGTCCTCAGCACCCTACACCCCAACTCTC | + |
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Preference number: 1 (lower is better) Translates to: GSLPPITPVLGDPTQ*GLAFGSSAPYTPTL Trigger: GAGAGTTGGGGTGTAGGGTGCTGAGGACCCAAATGCAAGTCCTCATTGCGTTGGATCCCCTAGAACAGGAGTTATAGGTGGTAAACTACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR CCA 90 bp | AGACCATTCCCAAGCCATTTTCTGGCATCTTCTCCAGGGTGGACCTaGGATCTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: RPFPSHFLASSPGWT*DLVCVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACACAAGATCCCAGGTCCACCCTGGAGAAGATGCCAGAAAATGGCTTGGGAATGGTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR CCA 90 bp | TATAACTCCTGTTCTAGGGGATCCAACGCAATGAGGACTTGCATTTaGGTCCTCAGCACCCTACACCCCAACTCTCCAATGCTGCATGTC | + |
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Preference number: 1 (lower is better) Translates to: YNSCSRGSNAMRTCI*VLSTLHPNSPMLHV Trigger: GACATGCAGCATTGGAGAGTTGGGGTGTAGGGTGCTGAGGACCCAAATGCAAGTCCTCATTGCGTTGGATCCCCTAGAACAGGAGTTATA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR TCA 90 bp | TGGTCGGGCCACCAAAGACTTAAAACTCTGCTAAGGCTTCCTCTCTaGTCCCCAGAGACAAGACTTTCTCCTTCAAGGCTCTTAGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: WSGHQRLKTLLRLPL*SPETRLSPSRLLVL Trigger: CAGCACTAAGAGCCTTGAAGGAGAAAGTCTTGTCTCTGGGGATCAGAGAGGAAGCCTTAGCAGAGTTTTAAGTCTTTGGTGGCCCGACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR TCA 90 bp | GTCAGTCTTGGCTCCATAGTGAGTTCAAGACCATCATGGGCTAAATaGTACCCTCTAGCTAGACAACTGAAGACTAAGGCCACGAGACCG | + |
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Preference number: 1 (lower is better) Translates to: VSLGSIVSSRPSWAK*YPLARQLKTKATRP Trigger: CGGTCTCGTGGCCTTAGTCTTCAGTTGTCTAGCTAGAGGGTATCATTTAGCCCATGATGGTCTTGAACTCACTATGGAGCCAAGACTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR-3UTR CCA 90 bp | GTTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGACCCCAGGCCTGGTCTTaGGGCTCCAGTGAGATGTGG | + |
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Preference number: 2 (lower is better) Translates to: VRPQAWSWGSSEMWQYGRPQAWS*GSSEMW Trigger: CCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGG...TCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| 3UTR-3UTR CCA 90 bp | CCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTCGTTCGACCCCAGGCCTaGTCTTGGGGCTCCAGTGAG | + |
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Preference number: 2 (lower is better) Translates to: PRPGLGAPVRCGSMVECLVRPQA*SWGSSE Trigger: CTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAAC...GAGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| 3UTR-3UTR TCA 90 bp | TCCTTCAAGGCTCTTAGTGCTGTTCCCTTTGCCCCCACTAGGTGGGGCCCTTCTAGGAGAGGGGGCACTTaGAGAGAACGGGGTGAGGCC | + |
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Preference number: 2 (lower is better) Translates to: SFKALSAVPFAPTRWGPSRRGGT*RERGEA Trigger: GGCCTCACCCCGTTCTCTTCAAGTGCCCCCTCTCCT...AGAAGGGCCCCACCTAGTGGGGGCAAAGGGAACAGCACTAAGAGCCTTGAAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR-3UTR GCA 90 bp | GTTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGATTCGCCTCTCCTGCCTaGGGGCCAGCTCTCTTAGTT | + |
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Preference number: 2 (lower is better) Translates to: VRPQAWSWGSSEMWQYGRFASPA*GPALLV Trigger: AACTAAGAGAGCTGGCCCGCAGGCAGGAGAGGCGAA...TCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000110983.3 |
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| 3UTR-3UTR CCA 90 bp | GGGGTAGGAGGCAGGGCTGGGTTCTTCCACGGACGAGGGGCTTCAGATAAATACCCCATCCCTGGGCACTaGAGTTGGGCATGGGCATTA | + |
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Preference number: 2 (lower is better) Translates to: GVGGRAGFFHGRGASDKYPIPGH*SWAWAL Trigger: TAATGCCCATGCCCAACTCCAGTGCCCAGGGATGGG...GTATTTATCTGAAGCCCCTCGTCCGTGGAAGAACCCAGCCCTGCCTCCTACCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000141733.8 |
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| 3UTR-3UTR CCA 90 bp | GTTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGATCCGTAAGAGTGAGGTaGGGGCTTTCAAAGGATCTG | + |
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Preference number: 2 (lower is better) Translates to: VRPQAWSWGSSEMWQYGRSVRVR*GLSKDL Trigger: CAGATCCTTTGAAAGCCCCCACCTCACTCTTACGGA...TCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| 3UTR-3UTR CCA 90 bp | GGGCTCCCCTGCCTAAAGAGGACTTCGGGCATCATGTTTGAGGCCCTGCACTGGTCCGTAAGAGTGAGGTaGGGGCTTTCAAAGGATCTG | + |
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Preference number: 2 (lower is better) Translates to: GLPCLKRTSGIMFEALHWSVRVR*GLSKDL Trigger: CAGATCCTTTGAAAGCCCCCACCTCACTCTTACGGA...CCAGTGCAGGGCCTCAAACATGATGCCCGAAGTCCTCTTTAGGCAGGGGAGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110983.3 |
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| 3UTR-3UTR TCA 90 bp | AGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTCCTCTTAGTTGTTTGCGGATaGCCCAGAGCACCAGGTACA | + |
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Preference number: 2 (lower is better) Translates to: RPGLGAPVRCGSMVECLLLVVCG*PRAPGT Trigger: TGTACCTGGTGCTCTGGGTCATCCGCAAACAACTAA...GAGGAGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110983.3 |
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| 3UTR CAA 90 bp | TCCCAAGCCATTTTCTGGCATCTTCTCCAGGGTGGACCTGGGATCTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: SQAIFWHLLQGGPGI*CVCVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACACACACACACAAGATCCCAGGTCCACCCTGGAGAAGATGCCAGAAAATGGCTTGGGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR-3UTR TCA 90 bp | TTTCCAAAGGACCAGGGTTCTAGCCCTAGCATCCACACGGTAGTTTACCACCTAGGGACAGGCCAATATTaGGCCTTCAACTCCCATCCC | + |
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Preference number: 2 (lower is better) Translates to: FPKDQGSSPSIHTVVYHLGTGQY*AFNSHP Trigger: GGGATGGGAGTTGAAGGCTCAATATTGGCCTGTCCC...TAGGTGGTAAACTACCGTGTGGATGCTAGGGCTAGAACCCTGGTCCTTTGGAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR-3UTR CCA 90 bp | CAAGCCTCGGTTGGGAGTCAGGGCCACCCCACAGATACAGTAACAAACATTTACGCATCTTCTCCAGGGTaGACCTGGGATCTTGTGTGT | + |
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Preference number: 2 (lower is better) Translates to: QASVGSQGHPTDTVTNIYASSPG*TWDLVC Trigger: ACACACAAGATCCCAGGTCCACCCTGGAGAAGATGC...GTAAATGTTTGTTACTGTATCTGTGGGGTGGCCCTGACTCCCAACCGAGGCTTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR-3UTR GCA 90 bp | TTTCCAAAGGACCAGGGTTCTAGCCCTAGCATCCACACGGTAGTTTACCACCTATGGTCTCTCCACACATaGATACACACACTGACAGGC | + |
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Preference number: 2 (lower is better) Translates to: FPKDQGSSPSIHTVVYHLWSLHT*IHTLTG Trigger: GCCTGTCAGTGTGTGTATGCATGTGTGGAGAGACCA...TAGGTGGTAAACTACCGTGTGGATGCTAGGGCTAGAACCCTGGTCCTTTGGAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR-3UTR CCA 90 bp | TTTCCAAAGGACCAGGGTTCTAGCCCTAGCATCCACACGGTAGTTTACCACCTACACTGGAGTTGGGCATaGGCATTAAAGCTACATAGG | + |
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Preference number: 2 (lower is better) Translates to: FPKDQGSSPSIHTVVYHLHWSWA*ALKLHR Trigger: CCTATGTAGCTTTAATGCCCATGCCCAACTCCAGTG...TAGGTGGTAAACTACCGTGTGGATGCTAGGGCTAGAACCCTGGTCCTTTGGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR GCA 72 bp | GGCTGCCTCAGTCGGTCTGGGAGAGAAGGAGGAGCTTaGTCACCCACTGGGCCTAGTCCTCATCCAGCCAGG | + |
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Preference number: 3 (lower is better) Translates to: GCLSRSGREGGA*SPTGPSPHPAR Trigger: CCTGGCTGGATGAGGACTAGGCCCAGTGGGTGAGCAAGCTCCTCCTTCTCTCCCAGACCGACTGAGGCAGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR CCA 72 bp | CCAGGCCTGGCAAGGGCACCATGTGCCCTAAGAGCCTaGCCCACACCCAGCCTTAAGACAAGGGGCCCATTC | + |
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Preference number: 3 (lower is better) Translates to: PGLARAPCALRA*PTPSLKTRGPF Trigger: GAATGGGCCCCTTGTCTTAAGGCTGGGTGTGGGCCAGGCTCTTAGGGCACATGGTGCCCTTGCCAGGCCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR CCA 72 bp | ACTAGGTGGGGCCCTTCTTGGCTGCCTCAGTCGGTCTaGGAGAGAAGGAGGAGCTTGCTCACCCACTGGGCC | + |
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Preference number: 3 (lower is better) Translates to: TRWGPSWLPQSV*ERRRSLLTHWA Trigger: GGCCCAGTGGGTGAGCAAGCTCCTCCTTCTCTCCCAGACCGACTGAGGCAGCCAAGAAGGGCCCCACCTAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR CCA 72 bp | GCTGTTCCCTTTGCCCCCACTAGGTGGGGCCCTTCTTaGCTGCCTCAGTCGGTCTGGGAGAGAAGGAGGAGC | + |
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Preference number: 3 (lower is better) Translates to: AVPFAPTRWGPS*LPQSVWERRRS Trigger: GCTCCTCCTTCTCTCCCAGACCGACTGAGGCAGCCAAGAAGGGCCCCACCTAGTGGGGGCAAAGGGAACAGC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR GCA 72 bp | TTCCCTTTGCCCCCACTAGGTGGGGCCCTTCTTGGCTaGCTCAGTCGGTCTGGGAGAGAAGGAGGAGCTTGC | + |
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Preference number: 3 (lower is better) Translates to: FPLPPLGGALLG*LSRSGREGGAC Trigger: GCAAGCTCCTCCTTCTCTCCCAGACCGACTGAGGCAGCCAAGAAGGGCCCCACCTAGTGGGGGCAAAGGGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR TCA 72 bp | TCTGGGGAGACCGAGCGGGATGGGACAGGCCAATATTaGGCCTTCAACTCCCATCCCTGGGCACTGGAGTTG | + |
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Preference number: 3 (lower is better) Translates to: SGETERDGTGQY*AFNSHPWALEL Trigger: CAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTCCCATCCCGCTCGGTCTCCCCAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000141733.8 |
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| 3UTR TCA 72 bp | ACTAAGGCCACGAGACCGTGGGTAAGGAGGAGGTGCTaGTTACACAAGCCTCGGTTGGGAGTCAGGGCCACC | + |
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Preference number: 3 (lower is better) Translates to: TKATRPWVRRRC*LHKPRLGVRAT Trigger: GGTGGCCCTGACTCCCAACCGAGGCTTGTGTAATCAGCACCTCCTCCTTACCCACGGTCTCGTGGCCTTAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR TCA 72 bp | GTGTGTTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTaGGATGTGGCAGTATGGTCGAATGTCTCCTCACCA | + |
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Preference number: 3 (lower is better) Translates to: VCSTPGLVLGLQ*DVAVWSNVSSP Trigger: TGGTGAGGAGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAACACAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| 3UTR-3UTR CAA 90 bp | GCACCATGTGCCCTAAGAGCCTGGCCCACACCCAGCCTTAAGACAAGGGGCCCATCACCAAAGACTTCATaGTTATGGCCTCCCCTCACA | + |
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Preference number: 3 (lower is better) Translates to: APCALRAWPTPSLKTRGPSPKTS*LWPPLT Trigger: TGTGAGGGGAGGCCATAACAATGAAGTCTTTGGTGA...TGGGCCCCTTGTCTTAAGGCTGGGTGTGGGCCAGGCTCTTAGGGCACATGGTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| 3UTR CCA 72 bp | CCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCATaGGCATTAAAGCTACATAGGAAGAGGGGGCAGGCT | + |
|
Preference number: 3 (lower is better) Translates to: PSTPIPGHWSWA*ALKLHRKRGQA Trigger: AGCCTGCCCCCTCTTCCTATGTAGCTTTAATGCCCATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| 3UTR CCA 72 bp | CTACTGAGAGTCTGTCTCAGGGCTCTCAGAGGCAGATaGCCAGCCTGGTCTACAGGGAAAGTTCCTGGACAG | + |
|
Preference number: 3 (lower is better) Translates to: LLRVCLRALRGR*PAWSTGKVPGQ Trigger: CTGTCCAGGAACTTTCCCTGTAGACCAGGCTGGCCATCTGCCTCTGAGAGCCCTGAGACAGACTCTCAGTAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR-3UTR CAA 90 bp | GAGGTGCTGATTACACAAGCCTCGGTTGGGAGTCAGGGCCACCCCACAGATACATGGGACAGGCCAATATaGAGCCTTCAACTCCCATCC | + |
|
Preference number: 3 (lower is better) Translates to: EVLITQASVGSQGHPTDTWDRPI*SLQLPS Trigger: GGATGGGAGTTGAAGGCTCAATATTGGCCTGTCCCA...TGTATCTGTGGGGTGGCCCTGACTCCCAACCGAGGCTTGTGTAATCAGCACCTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR TCA 72 bp | GCTCCCCTGCCTAAAGAGGACTTCGGGCATCATGTTTaGGGCCCTGCACTGGTTCAGAGTGACGGGAAGTAT | + |
|
Preference number: 3 (lower is better) Translates to: APLPKEDFGHHV*GPALVQSDGKY Trigger: ATACTTCCCGTCACTCTGAACCAGTGCAGGGCCTCAAACATGATGCCCGAAGTCCTCTTTAGGCAGGGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110983.3 |
||
| 3UTR GCA 72 bp | GGGTCCTCAGCACCCTACACCCCAACTCTCCAATGCTaGATGTCTGTAATTCTAGTGGGGAAGCCGAGACTG | + |
|
Preference number: 3 (lower is better) Translates to: GSSAPYTPTLQC*MSVILVGKPRL Trigger: CAGTCTCGGCTTCCCCACTAGAATTACAGACATGCAGCATTGGAGAGTTGGGGTGTAGGGTGCTGAGGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR CCA 72 bp | ATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTaGGCATGGGCATTAAAGCTACATAGGAAGAGGGGG | + |
|
Preference number: 3 (lower is better) Translates to: IEPSTPIPGHWS*AWALKLHRKRG Trigger: CCCCCTCTTCCTATGTAGCTTTAATGCCCATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| 3UTR CCA 72 bp | AAGAGGACTTCGGGCATCATGTTTGAGGCCCTGCACTaGTTCAGAGTGACGGGAAGTATGGGAGGGATGAGA | + |
|
Preference number: 3 (lower is better) Translates to: KRTSGIMFEALH*FRVTGSMGGMR Trigger: TCTCATCCCTCCCATACTTCCCGTCACTCTGAACCAGTGCAGGGCCTCAAACATGATGCCCGAAGTCCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110983.3 |
||
| 3UTR-3UTR CAA 90 bp | AGTCAGGGCCACCCCACAGATACAGTAACAAACATTTACAATACCAGAGGTCCTTCCATACACCCTCCCTaGGCAGAGGAGAGGGGGCAC | + |
|
Preference number: 3 (lower is better) Translates to: SQGHPTDTVTNIYNTRGPSIHPP*AEERGH Trigger: GTGCCCCCTCTCCTCTGCCAAGGGAGGGTGTATGGA...AGGACCTCTGGTATTGTAAATGTTTGTTACTGTATCTGTGGGGTGGCCCTGACT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR TCA 72 bp | CCACCTATAACTCCTGTTCTAGGGGATCCAACGCAATaGGGACTTGCATTTGGGTCCTCAGCACCCTACACC | + |
|
Preference number: 3 (lower is better) Translates to: PPITPVLGDPTQ*GLAFGSSAPYT Trigger: GGTGTAGGGTGCTGAGGACCCAAATGCAAGTCCTCATTGCGTTGGATCCCCTAGAACAGGAGTTATAGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR GCA 72 bp | TTTGGGTCCTCAGCACCCTACACCCCAACTCTCCAATaGTGCATGTCTGTAATTCTAGTGGGGAAGCCGAGA | + |
|
Preference number: 3 (lower is better) Translates to: FGSSAPYTPTLQ*CMSVILVGKPR Trigger: TCTCGGCTTCCCCACTAGAATTACAGACATGCAGCATTGGAGAGTTGGGGTGTAGGGTGCTGAGGACCCAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR GCA 72 bp | AACTCCTGTTCTAGGGGATCCAACGCAATGAGGACTTaGATTTGGGTCCTCAGCACCCTACACCCCAACTCT | + |
|
Preference number: 3 (lower is better) Translates to: NSCSRGSNAMRT*IWVLSTLHPNS Trigger: AGAGTTGGGGTGTAGGGTGCTGAGGACCCAAATGCAAGTCCTCATTGCGTTGGATCCCCTAGAACAGGAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR CCA 72 bp | CCATTCCCAAGCCATTTTCTGGCATCTTCTCCAGGGTaGACCTGGGATCTTGTGTGTGTGTGTGTGTGTGTG | + |
|
Preference number: 3 (lower is better) Translates to: PFPSHFLASSPG*TWDLVCVCVCV Trigger: CACACACACACACACACACACAAGATCCCAGGTCCACCCTGGAGAAGATGCCAGAAAATGGCTTGGGAATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR CCA 72 bp | CTTTCCAGGGACCAAGACCATTCCCAAGCCATTTTCTaGCATCTTCTCCAGGGTGGACCTGGGATCTTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: LSRDQDHSQAIF*HLLQGGPGILC Trigger: ACACAAGATCCCAGGTCCACCCTGGAGAAGATGCCAGAAAATGGCTTGGGAATGGTCTTGGTCCCTGGAAAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR CCA 72 bp | TGTTCTAGGGGATCCAACGCAATGAGGACTTGCATTTaGGTCCTCAGCACCCTACACCCCAACTCTCCAATG | + |
|
Preference number: 3 (lower is better) Translates to: CSRGSNAMRTCI*VLSTLHPNSPM Trigger: CATTGGAGAGTTGGGGTGTAGGGTGCTGAGGACCCAAATGCAAGTCCTCATTGCGTTGGATCCCCTAGAACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR TCA 72 bp | GTATGGTCGAATGTCTCCTCACCAGTAGCTCTGGCCTaGTGGCCATTGAACCCTTCCTGTCAATCTTCCGTA | + |
|
Preference number: 3 (lower is better) Translates to: VWSNVSSPVALA*WPLNPSCQSSV Trigger: TACGGAAGATTGACAGGAAGGGTTCAATGGCCATCAGGCCAGAGCTACTGGTGAGGAGACATTCGACCATAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| 3UTR TCA 72 bp | ACAGACCCTGTCTCAGAGAAGGTGAAAGGTGAAGAGTaGCACCCAGGTTTATCCTCTGGTCTCTCCATGTGG | + |
|
Preference number: 3 (lower is better) Translates to: TDPVSEKVKGEE*HPGLSSGLSMW Trigger: CCACATGGAGAGACCAGAGGATAAACCTGGGTGTCACTCTTCACCTTTCACCTTCTCTGAGACAGGGTCTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTGTTTGTGTGCGCGAGGGCGTaGGTTGGGGACAGCATAACTACATACATAGCTAGA | + |
|
Preference number: 3 (lower is better) Translates to: CVCVCVFVCARA*VGDSITTYIAR Trigger: TCTAGCTATGTATGTAGTTATGCTGTCCCCAACGCACGCCCTCGCGCACACAAACACACACACACACACACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR CCA 72 bp | GCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTaGAGTTGGGCATGGGCATTAAAGCTACATAGGAAG | + |
|
Preference number: 3 (lower is better) Translates to: ANIEPSTPIPGH*SWAWALKLHRK Trigger: CTTCCTATGTAGCTTTAATGCCCATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| 3UTR CCA 72 bp | CAGGGAATGAGAGGCCAAGATAAAAGGATGGCTAGCTaGGCATCCTTAGTAAGGACAGACCCTGTCTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: QGMRGQDKRMAS*ASLVRTDPVSE Trigger: CTCTGAGACAGGGTCTGTCCTTACTAAGGATGCCCAGCTAGCCATCCTTTTATCTTGGCCTCTCATTCCCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR TCA 72 bp | ATCCTCTGGTCTCTCCATGTGGGCAATAGCACAGAGTaGACACTCGAATCACACAACAATGAACCAGGGCCA | + |
|
Preference number: 3 (lower is better) Translates to: ILWSLHVGNSTE*TLESHNNEPGP Trigger: TGGCCCTGGTTCATTGTTGTGTGATTCGAGTGTTCACTCTGTGCTATTGCCCACATGGAGAGACCAGAGGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR TCA 72 bp | AGTAAGGACAGACCCTGTCTCAGAGAAGGTGAAAGGTaGAGAGTGACACCCAGGTTTATCCTCTGGTCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: SKDRPCLREGER*RVTPRFILWSL Trigger: GAGAGACCAGAGGATAAACCTGGGTGTCACTCTTCACCTTTCACCTTCTCTGAGACAGGGTCTGTCCTTACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR TCA 72 bp | CACCAAAGACTTAAAACTCTGCTAAGGCTTCCTCTCTaGTCCCCAGAGACAAGACTTTCTCCTTCAAGGCTC | + |
|
Preference number: 3 (lower is better) Translates to: HQRLKTLLRLPL*SPETRLSPSRL Trigger: GAGCCTTGAAGGAGAAAGTCTTGTCTCTGGGGATCAGAGAGGAAGCCTTAGCAGAGTTTTAAGTCTTTGGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR TCA 72 bp | GGCTCCATAGTGAGTTCAAGACCATCATGGGCTAAATaGTACCCTCTAGCTAGACAACTGAAGACTAAGGCC | + |
|
Preference number: 3 (lower is better) Translates to: GSIVSSRPSWAK*YPLARQLKTKA Trigger: GGCCTTAGTCTTCAGTTGTCTAGCTAGAGGGTATCATTTAGCCCATGATGGTCTTGAACTCACTATGGAGCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| 3UTR TCA 72 bp | AATTATTATTTTAACAACAACCTGAATCCGAGAAGTTaGAGATACTGTCCATACACCCTCCCTTGGCAGAGG | + |
|
Preference number: 3 (lower is better) Translates to: NYYFNNNLNPRS*RYCPYTLPWQR Trigger: CCTCTGCCAAGGGAGGGTGTATGGACAGTATCTTCAACTTCTCGGATTCAGGTTGTTGTTAAAATAATAATT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR TCA 90 bp | GTGTTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCTGGAACGGGCCAGGCTaGGGCTCTGGGCTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: VFDPRPGLGAPVRCGSMVWNGPG*GSGLLR Trigger: CCGCAGCAGCCCAGAGCCTCAGCCTGGCCCGTTCCA...GACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAACAC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR CCA 90 bp | TACATAGGAAGAGGGGGCAGGCTGCCGGCACAAGGCGCAACAGCCAGTGGCAGCGCCCTGAGACAGGCCTaGCTGCGGGATAGGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: YIGRGGRLPAQGATASGSALRQA*LRDRGA Trigger: AGCACCCCTATCCCGCAGCCAGGCCTGTCTCAGGGC...GCTGCCACTGGCTGTTGCGCCTTGTGCCGGCAGCCTGCCCCCTCTTCCTATGTA 66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR TCA 90 bp | AGGGCACCATGTGCCCTAAGAGCCTGGCCCACACCCAGCCTTAAGACAAGGGGCCTGGGGTGGAGATGCTaGCAGCGGGGGTGTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: RAPCALRAWPTPSLKTRGLGWRC*QRGCLH Trigger: GTGGAGACACCCCCGCTGTCAGCATCTCCACCCCAG...GCCCCTTGTCTTAAGGCTGGGTGTGGGCCAGGCTCTTAGGGCACATGGTGCCCT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR TCA 90 bp | TACATAGGAAGAGGGGGCAGGCTGCCGGCACAAGGCGCAACAGCCAGTGGCAGCAGGGGTTGCGGCTGCTaGACCCCCAGACTCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: YIGRGGRLPAQGATASGSRGCGC*TPRLHF Trigger: GAAGTGGAGTCTGGGGGTTCAGCAGCCGCAACCCCT...GCTGCCACTGGCTGTTGCGCCTTGTGCCGGCAGCCTGCCCCCTCTTCCTATGTA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTGGCAGGGGCTCCAGGTaGCGGAGAGCCATTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PQAWSWGSSEMWQYGRMSGRGSR*RRAIPG Trigger: CCCCGGAATGGCTCTCCGCCACCTGGAGCCCCTGCC...AGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR CCA 90 bp | TGGAGTTGGGCATGGGCATTAAAGCTACATAGGAAGAGGGGGCAGGCTGCCGGCCCCGAGGATGGCAGCTaGGCCAGCTGCTCCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: WSWAWALKLHRKRGQAAGPEDGS*ASCSGL Trigger: CAGCCCGGAGCAGCTGGCCCAGCTGCCATCCTCGGG...GCCGGCAGCCTGCCCCCTCTTCCTATGTAGCTTTAATGCCCATGCCCAACTCCA 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR CCA 90 bp | GGGGTAGGAGGCAGGGCTGGGTTCTTCCACGGACGAGGGGCTTCAGATAAATACCAGAGGGCCCGAGCCTaGGGAGCCCCGAGGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: GVGGRAGFFHGRGASDKYQRARA*GAPRMA Trigger: TGCCATCCTCGGGGCTCCCCAGGCTCGGGCCCTCTG...GTATTTATCTGAAGCCCCTCGTCCGTGGAAGAACCCAGCCCTGCCTCCTACCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000141733.8 |
||
| CDS-3UTR GCA 90 bp | GGGAGAGAAGGAGGAGCTTGCTCACCCACTGGGCCTAGTCCTCATCCAGCCAGGCAGAGGCCCCTCGAATaGCCTCCAGAAGCCGACCGA | + |
|
Preference number: 4 (lower is better) Translates to: GREGGACSPTGPSPHPARQRPLE*PPEADR Trigger: TCGGTCGGCTTCTGGAGGGCATTCGAGGGGCCTCTG...CCTGGCTGGATGAGGACTAGGCCCAGTGGGTGAGCAAGCTCCTCCTTCTCTCCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR GCA 90 bp | TACATAGGAAGAGGGGGCAGGCTGCCGGCACAAGGCGCAACAGCCAGTGGCAGCTGCAGCGTTCCGCTCTaGCAGGTCTCGGATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: YIGRGGRLPAQGATASGSCSVPL*QVSDLL Trigger: GAGCAGATCCGAGACCTGGCAGAGCGGAACGCTGCA...GCTGCCACTGGCTGTTGCGCCTTGTGCCGGCAGCCTGCCCCCTCTTCCTATGTA 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR CCA 90 bp | GGACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCACCCGAGGATGGCAGCTaGGCCAGCTGCTCCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: GQANIEPSTPIPGHWSWAPEDGS*ASCSGL Trigger: CAGCCCGGAGCAGCTGGCCCAGCTGCCATCCTCGGG...TGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGCATGGGCATTAAAGCTACATAGGAAGAGGGGGCAGGCTGCCGGCACACCCGAGGATGGCAGCTaGGCCAGCTGCTCCGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: SWAWALKLHRKRGQAAGTPEDGS*ASCSGL Trigger: CAGCCCGGAGCAGCTGGCCCAGCTGCCATCCTCGGG...TGTGCCGGCAGCCTGCCCCCTCTTCCTATGTAGCTTTAATGCCCATGCCCAACT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR TCA 90 bp | GATGAGACCACATACGGCGCCGTCTTCGCCTCTCCTGCCTGCGGGCCAGCTCTCAGATCTTTCCTTGGCTaGGGGCAGCACACAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: DETTYGAVFASPACGPALRSFLG*GQHTGF Trigger: GAACCCTGTGTGCTGCCCTCAGCCAAGGAAAGATCT...GAGAGCTGGCCCGCAGGCAGGAGAGGCGAAGACGGCGCCGTATGTGGTCTCATC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110983.3 |
||
| CDS-3UTR TCA 90 bp | TTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAACTGGGGTGGAGATGCTaGCAGCGGGGGTGTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FDPRPGLGAPVRCGSMVELGWRC*QRGCLH Trigger: GTGGAGACACCCCCGCTGTCAGCATCTCCACCCCAG...TTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR GCA 90 bp | ATGAGACCACATACGGCGCCGTCTTCGCCTCTCCTGCCTGCGGGCCAGCTCTCTCGGACGTGCCTGGCTTaGCTAGGTGTTTCCAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: MRPHTAPSSPLLPAGQLSRTCLA*LGVSRT Trigger: CGTTCTGGAAACACCTAGGCAAGCCAGGCACGTCCG...AGAGAGCTGGCCCGCAGGCAGGAGAGGCGAAGACGGCGCCGTATGTGGTCTCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110983.3 |
||
| CDS-3UTR GCA 90 bp | CGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGCAGAGGCCCCTCGAATaGCCTCCAGAAGCCGACCGA | + |
|
Preference number: 4 (lower is better) Translates to: RPQAWSWGSSEMWQYGRMQRPLE*PPEADR Trigger: TCGGTCGGCTTCTGGAGGGCATTCGAGGGGCCTCTG...CATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR CCA 90 bp | GTGTTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGGCTCTCCCAAACCTTaGGGCAGCTTCACCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: VFDPRPGLGAPVRCGSMVGSPKP*GSFTTR Trigger: CCGGGTGGTGAAGCTGCCCCAAGGTTTGGGAGAGCC...GACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAACAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR CCA 90 bp | TGGAGTTGGGCATGGGCATTAAAGCTACATAGGAAGAGGGGGCAGGCTGCCGGCAGAGGGCTGGGGAGTTaGGGCGAGAGTCGGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: WSWAWALKLHRKRGQAAGRGLGS*GESRWE Trigger: CTCCCACCGACTCTCGCCCCAACTCCCCAGCCCTCT...GCCGGCAGCCTGCCCCCTCTTCCTATGTAGCTTTAATGCCCATGCCCAACTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR CCA 90 bp | CCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCATGGGCATCAGAGGGCCCGAGCCTaGGGAGCCCCGAGGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: PILSLQLPSLGTGVGHGHQRARA*GAPRMA Trigger: TGCCATCCTCGGGGCTCCCCAGGCTCGGGCCCTCTG...ATGCCCATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| 3UTR CAA 72 bp | CGCCTCTCCTGCCTGCGGGCCAGCTCTCTTAGTTGTTaGCGGATGACCCAGAGCACCAGGTACACTTCCCGC | + |
|
Preference number: 4 (lower is better) Translates to: RLSCLRASSLSC*RMTQSTRYTSR Trigger: GCGGGAAGTGTACCTGGTGCTCTGGGTCATCCGCAAACAACTAAGAGAGCTGGCCCGCAGGCAGGAGAGGCG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110983.3 |
||
| CDS-3UTR TCA 90 bp | TACATAGGAAGAGGGGGCAGGCTGCCGGCACAAGGCGCAACAGCCAGTGGCAGCCTCGCACGGCAAACATaGGGTGGGACTTCACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: YIGRGGRLPAQGATASGSLARQT*GGTSPS Trigger: ACTTGGTGAAGTCCCACCTCATGTTTGCCGTGCGAG...GCTGCCACTGGCTGTTGCGCCTTGTGCCGGCAGCCTGCCCCCTCTTCCTATGTA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR TCA 90 bp | CCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCATGGGCATCCCTCGGATGGGGGATaGCCCCCGTGGAGAGCATGG | + |
|
Preference number: 4 (lower is better) Translates to: PILSLQLPSLGTGVGHGHPSDGG*PPWRAW Trigger: CCATGCTCTCCACGGGGGTCATCCCCCATCCGAGGG...ATGCCCATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000110985.2 |
||
| CDS-3UTR GCA 90 bp | CCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTGAGGCTCTGGGCTGCTaGGGCTCCAAATGGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PQAWSWGSSEMWQYGRMSEALGC*GSKWVW Trigger: CCAGACCCATTTGGAGCCGCAGCAGCCCAGAGCCTC...AGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR GCA 90 bp | GCATGGGCATTAAAGCTACATAGGAAGAGGGGGCAGGCTGCCGGCACAAGGCGCGCCAGGTCTCGGATCTaGTCCTTCAGCACCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: AWALKLHRKRGQAAGTRRARSRI*SFSTST Trigger: GGTGGAGGTGCTGAAGGAGCAGATCCGAGACCTGGC...GCGCCTTGTGCCGGCAGCCTGCCCCCTCTTCCTATGTAGCTTTAATGCCCATGC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTAGCCCCTGGGCTTCCTaGGCCCTCATAGTCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PQAWSWGSSEMWQYGRMSSPWAS*ALIVRG Trigger: ACCACGGACTATGAGGGCCCAGGAAGCCCAGGGGCT...AGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR CCA 90 bp | TGTGTTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTGCCAGGCTGAGGCTCTaGGCTGCTGCGGCTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: CVRPQAWSWGSSEMWQYGARLRL*AAAAPN Trigger: ATTTGGAGCCGCAGCAGCCCAGAGCCTCAGCCTGGC...ACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAACACA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR CCA 90 bp | AGTTGGGCATGGGCATTAAAGCTACATAGGAAGAGGGGGCAGGCTGCCGGCACAAGATGGAGGGCCCATTaGGTGCAGAGGGCCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: SWAWALKLHRKRGQAAGTRWRAH*VQRARA Trigger: GGCTCGGGCCCTCTGCACCCAATGGGCCCTCCATCT...TGTGCCGGCAGCCTGCCCCCTCTTCCTATGTAGCTTTAATGCCCATGCCCAACT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR CCA 90 bp | GGACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCAAGATGGAGGGCCCATTaGGTGCAGAGGGCCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: GQANIEPSTPIPGHWSWARWRAH*VQRARA Trigger: GGCTCGGGCCCTCTGCACCCAATGGGCCCTCCATCT...TGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR TCA 90 bp | TTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAACAGCATCTCAGCCTCTaGCGTCCCCAATGCCGACCT | + |
|
Preference number: 4 (lower is better) Translates to: FDPRPGLGAPVRCGSMVEQHLSL*RPQCRP Trigger: AGGTCGGCATTGGGGACGTCAGAGGCTGAGATGCTG...TTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 |
||
| CDS-3UTR TCA 90 bp | CCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTCCAGCATCTCAGCCTCTaGCGTCCCCAATGCCGACCT | + |
|
Preference number: 4 (lower is better) Translates to: PRPGLGAPVRCGSMVECLQHLSL*RPQCRP Trigger: AGGTCGGCATTGGGGACGTCAGAGGCTGAGATGCTG...GAGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 |
||
| CDS-3UTR TCA 90 bp | AGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTCCTCAGGGGTTGCGGCTGCTaGACCCCCAGACTCCACTTC | + |
|
Preference number: 4 (lower is better) Translates to: RPGLGAPVRCGSMVECLLRGCGC*TPRLHF Trigger: GAAGTGGAGTCTGGGGGTTCAGCAGCCGCAACCCCT...GAGGAGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR GCA 90 bp | TGTGTTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTATGATCTGCCTCCGGTaGCTCCAGAGGCCCCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: CVRPQAWSWGSSEMWQYGMICLR*LQRPLE Trigger: TTCGAGGGGCCTCTGGAGGCACCGGAGGCAGATCAT...ACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAACACA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR GCA 90 bp | ACTGAAGGATCCCTGGGGCTTGCTGGCCAGTCAGTCTTAGCTCCATCCGTGAACGAGGCTCTGGGCTGCTaGGGCTCCAAATGGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: TEGSLGLAGQSVLAPSVNEALGC*GSKWVW Trigger: CCAGACCCATTTGGAGCCGCAGCAGCCCAGAGCCTC...GTTCACGGATGGAGCTAAGACTGACTGGCCAGCAAGCCCCAGGGATCCTTCAGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR GCA 90 bp | TTAAAGCTACATAGGAAGAGGGGGCAGGCTGCCGGCACAAGGCGCAACAGCCAGGCCAGGTCTCGGATCTaGTCCTTCAGCACCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: LKLHRKRGQAAGTRRNSQARSRI*SFSTST Trigger: GGTGGAGGTGCTGAAGGAGCAGATCCGAGACCTGGC...CTGGCTGTTGCGCCTTGTGCCGGCAGCCTGCCCCCTCTTCCTATGTAGCTTTAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR CCA 90 bp | TGTCAATCTTCCGTAAGAGTGAGGTGGGGGCTTTCAAAGGATCTGGGGCTCCCCGCCCTGAGACAGGCCTaGCTGCGGGATAGGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: CQSSVRVRWGLSKDLGLPALRQA*LRDRGA Trigger: AGCACCCCTATCCCGCAGCCAGGCCTGTCTCAGGGC...GGGGAGCCCCAGATCCTTTGAAAGCCCCCACCTCACTCTTACGGAAGATTGACA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR CCA 90 bp | TCCTTCAAGGCTCTTAGTGCTGTTCCCTTTGCCCCCACTAGGTGGGGCCCTTCTGCCAGGCTGAGGCTCTaGGCTGCTGCGGCTCCAAAT | + |
|
Preference number: 4 (lower is better) Translates to: SFKALSAVPFAPTRWGPSARLRL*AAAAPN Trigger: ATTTGGAGCCGCAGCAGCCCAGAGCCTCAGCCTGGC...AGAAGGGCCCCACCTAGTGGGGGCAAAGGGAACAGCACTAAGAGCCTTGAAGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR CCA 90 bp | CAAGCCTCGGTTGGGAGTCAGGGCCACCCCACAGATACAGTAACAAACATTTACCAGAGGGCCCGAGCCTaGGGAGCCCCGAGGATGGCA | + |
|
Preference number: 4 (lower is better) Translates to: QASVGSQGHPTDTVTNIYQRARA*GAPRMA Trigger: TGCCATCCTCGGGGCTCCCCAGGCTCGGGCCCTCTG...GTAAATGTTTGTTACTGTATCTGTGGGGTGGCCCTGACTCCCAACCGAGGCTTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR CCA 90 bp | GACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCATCCCCCGTGGAGAGCATaGGGAAGACACGCAGCCCCT | + |
|
Preference number: 4 (lower is better) Translates to: DRPILSLQLPSLGTGVGHPPWRA*GRHAAP Trigger: AGGGGCTGCGTGTCTTCCCCATGCTCTCCACGGGGG...ATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110985.2 |
||
| 3UTR CAA 72 bp | CTCTGGGGAGACCGAGCGGGATGGGACAGGCCAATATaGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: LWGDRAGWDRPI*SLQLPSLGTGV Trigger: AACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTCCCATCCCGCTCGGTCTCCCCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000141733.8 |
||
| CDS-3UTR TCA 90 bp | TTTCCAAAGGACCAGGGTTCTAGCCCTAGCATCCACACGGTAGTTTACCACCTATGGAACGGGCCAGGCTaGGGCTCTGGGCTGCTGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FPKDQGSSPSIHTVVYHLWNGPG*GSGLLR Trigger: CCGCAGCAGCCCAGAGCCTCAGCCTGGCCCGTTCCA...TAGGTGGTAAACTACCGTGTGGATGCTAGGGCTAGAACCCTGGTCCTTTGGAAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR GCA 90 bp | AGTTGGGCATGGGCATTAAAGCTACATAGGAAGAGGGGGCAGGCTGCCGGCACAATGATCTGCCTCCGGTaGCTCCAGAGGCCCCTCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SWAWALKLHRKRGQAAGTMICLR*LQRPLE Trigger: TTCGAGGGGCCTCTGGAGGCACCGGAGGCAGATCAT...TGTGCCGGCAGCCTGCCCCCTCTTCCTATGTAGCTTTAATGCCCATGCCCAACT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR GCA 90 bp | GGACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCAGCCAGGTCTCGGATCTaGTCCTTCAGCACCTCCACC | + |
|
Preference number: 4 (lower is better) Translates to: GQANIEPSTPIPGHWSWAARSRI*SFSTST Trigger: GGTGGAGGTGCTGAAGGAGCAGATCCGAGACCTGGC...TGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGAGGCAGGGCTGGGTTCTTCCACGGACGAGGGGCTTCAGATAAATACCCTTGCAGCGTTCCGCTCTaGCAGGTCTCGGATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGGRAGFFHGRGASDKYPCSVPL*QVSDLL Trigger: GAGCAGATCCGAGACCTGGCAGAGCGGAACGCTGCA...AGGGTATTTATCTGAAGCCCCTCGTCCGTGGAAGAACCCAGCCCTGCCTCCTAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000141733.8 |
||
| CDS-3UTR CCA 90 bp | CCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTCGACCTGGTCCTCGTGTaGGAGGAAACTGAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: PRPGLGAPVRCGSMVECLDLVLV*EETEPA Trigger: TGCTGGCTCAGTTTCCTCCCACACGAGGACCAGGTC...GAGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| CDS-3UTR CCA 90 bp | GAGTGTGTTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGACCTGGTCCTCGTGTaGGAGGAAACTGAGCCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: ECVRPQAWSWGSSEMWQYDLVLV*EETEPA Trigger: TGCTGGCTCAGTTTCCTCCCACACGAGGACCAGGTC...ATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAACACACTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| CDS-3UTR CCA 90 bp | ATGGGACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGAGCCCCTGGGCTTCCTaGGCCCTCATAGTCCGTGGT | + |
|
Preference number: 4 (lower is better) Translates to: MGQANIEPSTPIPGHWSWSPWAS*ALIVRG Trigger: ACCACGGACTATGAGGGCCCAGGAAGCCCAGGGGCT...CCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTCCCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR CCA 90 bp | GACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCATGGCTCTCCCAAACCTTaGGGCAGCTTCACCACCCGG | + |
|
Preference number: 4 (lower is better) Translates to: DRPILSLQLPSLGTGVGHGSPKP*GSFTTR Trigger: CCGGGTGGTGAAGCTGCCCCAAGGTTTGGGAGAGCC...ATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR CCA 90 bp | GTGTTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCAAGCCGACCGAAGCTTaGAGGCTCCAGATCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: VFDPRPGLGAPVRCGSMVKPTEA*RLQISL Trigger: GAGAGAGATCTGGAGCCTCCAAGCTTCGGTCGGCTT...GACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAACAC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR CCA 90 bp | CCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCATGGGCATGAAGGAGCGGGCCTGTaGTCCAGGAGAAGTAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: PILSLQLPSLGTGVGHGHEGAGL*SRRSRG Trigger: CCCCCTACTTCTCCTGGACCACAGGCCCGCTCCTTC...ATGCCCATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR CCA 90 bp | ATGGTCGAATGTCTCCTCACCAGTAGCTCTGGCCTGATGGCCATTGAACCCTTCAGAGGGCTGGGGAGTTaGGGCGAGAGTCGGTGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: MVECLLTSSSGLMAIEPFRGLGS*GESRWE Trigger: CTCCCACCGACTCTCGCCCCAACTCCCCAGCCCTCT...GAAGGGTTCAATGGCCATCAGGCCAGAGCTACTGGTGAGGAGACATTCGACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR TCA 90 bp | CCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTCTTCGGGCATCATGTTTaGGGCCCTGCACTGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PRPGLGAPVRCGSMVECLFGHHV*GPALVQ Trigger: CTGAACCAGTGCAGGGCCTCAAACATGATGCCCGAA...GAGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 |
||
| CDS-3UTR TCA 90 bp | CCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTTTCGGGCATCATGTTTaGGGCCCTGCACTGGTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: PQAWSWGSSEMWQYGRMSFGHHV*GPALVQ Trigger: CTGAACCAGTGCAGGGCCTCAAACATGATGCCCGAA...AGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 |
||
| CDS-3UTR TCA 90 bp | GAGTGTGTTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATTCATCGCTGTCCAGGTaGCCGCTGATAGCCAACATG | + |
|
Preference number: 4 (lower is better) Translates to: ECVRPQAWSWGSSEMWQYSSLSR*PLIANM Trigger: CATGTTGGCTATCAGCGGTCACCTGGACAGCGATGA...ATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAACACACTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR GCA 90 bp | TACATAGGAAGAGGGGGCAGGCTGCCGGCACAAGGCGCAACAGCCAGTGGCAGCCAATCTTGTTGTCAATaGCAACCAGGCTTCCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: YIGRGGRLPAQGATASGSQSCCQ*QPGFRN Trigger: GTTCCGGAAGCCTGGTTGGCATTGACAACAAGATTG...GCTGCCACTGGCTGTTGCGCCTTGTGCCGGCAGCCTGCCCCCTCTTCCTATGTA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR GCA 90 bp | TGGAGTTGGGCATGGGCATTAAAGCTACATAGGAAGAGGGGGCAGGCTGCCGGCATTCTCCTGCTCCAATaGAGCGTTCCGCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSWAWALKLHRKRGQAAGILLLQ*SVPLCQ Trigger: CTGGCAGAGCGGAACGCTGCATTGGAGCAGGAGAAT...GCCGGCAGCCTGCCCCCTCTTCCTATGTAGCTTTAATGCCCATGCCCAACTCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR CCA 90 bp | CTCGGTTGGGAGTCAGGGCCACCCCACAGATACAGTAACAAACATTTACAATACGGCAGGGGCTCCAGGTaGCGGAGAGCCATTCCGGGG | + |
|
Preference number: 4 (lower is better) Translates to: LGWESGPPHRYSNKHLQYGRGSR*RRAIPG Trigger: CCCCGGAATGGCTCTCCGCCACCTGGAGCCCCTGCC...GTATTGTAAATGTTTGTTACTGTATCTGTGGGGTGGCCCTGACTCCCAACCGAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR CCA 90 bp | GGCAGTATGGTCGAATGTCTCCTCACCAGTAGCTCTGGCCTGATGGCCATTGAAGAAGGAGCGGGCCTGTaGTCCAGGAGAAGTAGGGGG | + |
|
Preference number: 4 (lower is better) Translates to: GSMVECLLTSSSGLMAIEEGAGL*SRRSRG Trigger: CCCCCTACTTCTCCTGGACCACAGGCCCGCTCCTTC...TTCAATGGCCATCAGGCCAGAGCTACTGGTGAGGAGACATTCGACCATACTGCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR CCA 90 bp | GTTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAGGCTCCAAATGGGTCTaGAGACTTATGGACCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VRPQAWSWGSSEMWQYGRGSKWV*RLMDQA Trigger: AGCCTGGTCCATAAGTCTCCAGACCCATTTGGAGCC...TCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAAC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR CCA 90 bp | AGGGCACCATGTGCCCTAAGAGCCTGGCCCACACCCAGCCTTAAGACAAGGGGCACGGCAAACATGAGGTaGGACTTCACCAAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: RAPCALRAWPTPSLKTRGTANMR*DFTKSM Trigger: CATGGACTTGGTGAAGTCCCACCTCATGTTTGCCGT...GCCCCTTGTCTTAAGGCTGGGTGTGGGCCAGGCTCTTAGGGCACATGGTGCCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR CCA 90 bp | CAAGCCTCGGTTGGGAGTCAGGGCCACCCCACAGATACAGTAACAAACATTTACAGATGGAGGGCCCATTaGGTGCAGAGGGCCCGAGCC | + |
|
Preference number: 4 (lower is better) Translates to: QASVGSQGHPTDTVTNIYRWRAH*VQRARA Trigger: GGCTCGGGCCCTCTGCACCCAATGGGCCCTCCATCT...GTAAATGTTTGTTACTGTATCTGTGGGGTGGCCCTGACTCCCAACCGAGGCTTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR TCA 90 bp | ACTGAAGGATCCCTGGGGCTTGCTGGCCAGTCAGTCTTAGCTCCATCCGTGAACCTCGCACGGCAAACATaGGGTGGGACTTCACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: TEGSLGLAGQSVLAPSVNLARQT*GGTSPS Trigger: ACTTGGTGAAGTCCCACCTCATGTTTGCCGTGCGAG...GTTCACGGATGGAGCTAAGACTGACTGGCCAGCAAGCCCCAGGGATCCTTCAGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR GCA 90 bp | AGATGTGGCAGTATGGTCGAATGTCTCCTCACCAGTAGCTCTGGCCTGATGGCCCGGACGTGCCTGGCTTaGCTAGGTGTTTCCAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: RCGSMVECLLTSSSGLMARTCLA*LGVSRT Trigger: CGTTCTGGAAACACCTAGGCAAGCCAGGCACGTCCG...GGCCATCAGGCCAGAGCTACTGGTGAGGAGACATTCGACCATACTGCCACATCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| CDS-3UTR GCA 90 bp | TGTCAATCTTCCGTAAGAGTGAGGTGGGGGCTTTCAAAGGATCTGGGGCTCCCCTTCGCCTCTCCTGCCTaGGGGCCAGCTCTCTTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: CQSSVRVRWGLSKDLGLPFASPA*GPALLV Trigger: AACTAAGAGAGCTGGCCCGCAGGCAGGAGAGGCGAA...GGGGAGCCCCAGATCCTTTGAAAGCCCCCACCTCACTCTTACGGAAGATTGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 |
||
| CDS-3UTR GCA 90 bp | CCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCATGGGCATTAAAGCTACATTGCAGCGTTCCGCTCTaGCAGGTCTCGGATCTGCTC | + |
|
Preference number: 4 (lower is better) Translates to: PSTPIPGHWSWAWALKLHCSVPL*QVSDLL Trigger: GAGCAGATCCGAGACCTGGCAGAGCGGAACGCTGCA...ATGTAGCTTTAATGCCCATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR GCA 90 bp | GTAGGAGGCAGGGCTGGGTTCTTCCACGGACGAGGGGCTTCAGATAAATACCCTATTCTCCTGCTCCAATaGAGCGTTCCGCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: VGGRAGFFHGRGASDKYPILLLQ*SVPLCQ Trigger: CTGGCAGAGCGGAACGCTGCATTGGAGCAGGAGAAT...AGGGTATTTATCTGAAGCCCCTCGTCCGTGGAAGAACCCAGCCCTGCCTCCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000141733.8 |
||
| CDS-3UTR GCA 90 bp | TTAAAGCTACATAGGAAGAGGGGGCAGGCTGCCGGCACAAGGCGCAACAGCCAGAGCAATCCATTCTCCTaGTCCAATGCAGCGTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: LKLHRKRGQAAGTRRNSQSNPFS*SNAAFR Trigger: GCGGAACGCTGCATTGGAGCAGGAGAATGGATTGCT...CTGGCTGTTGCGCCTTGTGCCGGCAGCCTGCCCCCTCTTCCTATGTAGCTTTAA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR CCA 90 bp | CTACCTCTTTCCTTAGGCCAGCCTGCTAGGCCTTTCCAGGGACCAAGACCATTCATCGAAGTAGAGGGCTaGGGAGTTGGGGCGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: LPLSLGQPARPFQGPRPFIEVEG*GVGARV Trigger: GACTCTCGCCCCAACTCCCCAGCCCTCTACTTCGAT...GAATGGTCTTGGTCCCTGGAAAGGCCTAGCAGGCTGGCCTAAGGAAAGAGGTAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR CCA 90 bp | CCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTACTTATGGACCAGGCTaGCATCGAAGTAGAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: PQAWSWGSSEMWQYGRMSTYGPG*HRSRGL Trigger: CAGCCCTCTACTTCGATGCCAGCCTGGTCCATAAGT...AGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR CCA 90 bp | TGGAGTTGGGCATGGGCATTAAAGCTACATAGGAAGAGGGGGCAGGCTGCCGGCGGCTCCAAATGGGTCTaGAGACTTATGGACCAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: WSWAWALKLHRKRGQAAGGSKWV*RLMDQA Trigger: AGCCTGGTCCATAAGTCTCCAGACCCATTTGGAGCC...GCCGGCAGCCTGCCCCCTCTTCCTATGTAGCTTTAATGCCCATGCCCAACTCCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| CDS-3UTR TCA 90 bp | TGTCAATCTTCCGTAAGAGTGAGGTGGGGGCTTTCAAAGGATCTGGGGCTCCCCAGATCTTTCCTTGGCTaGGGGCAGCACACAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: CQSSVRVRWGLSKDLGLPRSFLG*GQHTGF Trigger: GAACCCTGTGTGCTGCCCTCAGCCAAGGAAAGATCT...GGGGAGCCCCAGATCCTTTGAAAGCCCCCACCTCACTCTTACGGAAGATTGACA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS-3UTR TCA 90 bp | CCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTCTTAGTTGTTTGCGGATaGCCCAGAGCACCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: PRPGLGAPVRCGSMVECLLVVCG*PRAPGT Trigger: TGTACCTGGTGCTCTGGGTCATCCGCAAACAACTAA...GAGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 |
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| CDS-3UTR TCA 90 bp | CCCATCCCTGGGCACTGGAGTTGGGCATGGGCATTAAAGCTACATAGGAAGAGGTCATCGCTGTCCAGGTaGCCGCTGATAGCCAACATG | + |
|
Preference number: 4 (lower is better) Translates to: PIPGHWSWAWALKLHRKRSSLSR*PLIANM Trigger: CATGTTGGCTATCAGCGGTCACCTGGACAGCGATGA...CCTCTTCCTATGTAGCTTTAATGCCCATGCCCAACTCCAGTGCCCAGGGATGGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| CDS-3UTR TCA 90 bp | GACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCATCTCGCACGGCAAACATaGGGTGGGACTTCACCAAGT | + |
|
Preference number: 4 (lower is better) Translates to: DRPILSLQLPSLGTGVGHLARQT*GGTSPS Trigger: ACTTGGTGAAGTCCCACCTCATGTTTGCCGTGCGAG...ATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
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| CDS-3UTR CCA 90 bp | AGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTCCTCTTTGAGGCCCTGCACTaGTTCAGAGTGACGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: RPGLGAPVRCGSMVECLLFEALH*FRVTGS Trigger: ACTTCCCGTCACTCTGAACCAGTGCAGGGCCTCAAA...GAGGAGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 |
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| CDS-3UTR CCA 90 bp | GACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCATAAGCCGACCGAAGCTTaGAGGCTCCAGATCTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: DRPILSLQLPSLGTGVGHKPTEA*RLQISL Trigger: GAGAGAGATCTGGAGCCTCCAAGCTTCGGTCGGCTT...ATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| CDS-3UTR CCA 90 bp | GTAGGAGGCAGGGCTGGGTTCTTCCACGGACGAGGGGCTTCAGATAAATACCCTACTTATGGACCAGGCTaGCATCGAAGTAGAGGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VGGRAGFFHGRGASDKYPTYGPG*HRSRGL Trigger: CAGCCCTCTACTTCGATGCCAGCCTGGTCCATAAGT...AGGGTATTTATCTGAAGCCCCTCGTCCGTGGAAGAACCCAGCCCTGCCTCCTAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| CDS-3UTR TCA 90 bp | GAATGTCTCCTCACCAGTAGCTCTGGCCTGATGGCCATTGAACCCTTCCTGTCAAGATCTTTCCTTGGCTaGGGGCAGCACACAGGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: ECLLTSSSGLMAIEPFLSRSFLG*GQHTGF Trigger: GAACCCTGTGTGCTGCCCTCAGCCAAGGAAAGATCT...TGACAGGAAGGGTTCAATGGCCATCAGGCCAGAGCTACTGGTGAGGAGACATTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS-3UTR GCA 90 bp | TTCCTGTCAATCTTCCGTAAGAGTGAGGTGGGGGCTTTCAAAGGATCTGGGGCTCGGACGTGCCTGGCTTaGCTAGGTGTTTCCAGAACG | + |
|
Preference number: 4 (lower is better) Translates to: FLSIFRKSEVGAFKGSGARTCLA*LGVSRT Trigger: CGTTCTGGAAACACCTAGGCAAGCCAGGCACGTCCG...AGCCCCAGATCCTTTGAAAGCCCCCACCTCACTCTTACGGAAGATTGACAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS-3UTR GCA 90 bp | GGGGTAGGAGGCAGGGCTGGGTTCTTCCACGGACGAGGGGCTTCAGATAAATACCAATCTTGTTGTCAATaGCAACCAGGCTTCCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GVGGRAGFFHGRGASDKYQSCCQ*QPGFRN Trigger: GTTCCGGAAGCCTGGTTGGCATTGACAACAAGATTG...GTATTTATCTGAAGCCCCTCGTCCGTGGAAGAACCCAGCCCTGCCTCCTACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000141733.8 |
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| CDS-3UTR GCA 90 bp | TTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAACAATCTTGTTGTCAATaGCAACCAGGCTTCCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: FDPRPGLGAPVRCGSMVEQSCCQ*QPGFRN Trigger: GTTCCGGAAGCCTGGTTGGCATTGACAACAAGATTG...TTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
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| CDS-3UTR GCA 90 bp | GACCATTCCCAAGCCATTTTCTGGCATCTTCTCCAGGGTGGACCTGGGATCTTGATTCTCCTGCTCCAATaGAGCGTTCCGCTCTGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: DHSQAIFWHLLQGGPGILILLLQ*SVPLCQ Trigger: CTGGCAGAGCGGAACGCTGCATTGGAGCAGGAGAAT...CAAGATCCCAGGTCCACCCTGGAGAAGATGCCAGAAAATGGCTTGGGAATGGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| CDS-3UTR GCA 90 bp | GACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCATAGCAATCCATTCTCCTaGTCCAATGCAGCGTTCCGC | + |
|
Preference number: 4 (lower is better) Translates to: DRPILSLQLPSLGTGVGHSNPFS*SNAAFR Trigger: GCGGAACGCTGCATTGGAGCAGGAGAATGGATTGCT...ATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
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| CDS-3UTR CCA 90 bp | CCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTACCATGGCCTCTTTGTaGGGCTTGACCAACTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: PQAWSWGSSEMWQYGRMSTMASL*GLTNFT Trigger: TGTAAAGTTGGTCAAGCCCCACAAAGAGGCCATGGT...AGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS-3UTR CCA 90 bp | TTCCTGTCAATCTTCCGTAAGAGTGAGGTGGGGGCTTTCAAAGGATCTGGGGCTATCGAAGTAGAGGGCTaGGGAGTTGGGGCGAGAGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLSIFRKSEVGAFKGSGAIEVEG*GVGARV Trigger: GACTCTCGCCCCAACTCCCCAGCCCTCTACTTCGAT...AGCCCCAGATCCTTTGAAAGCCCCCACCTCACTCTTACGGAAGATTGACAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
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| CDS-3UTR GCA 90 bp | GGACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCACAATCTTGTTGTCAATaGCAACCAGGCTTCCGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: GQANIEPSTPIPGHWSWAQSCCQ*QPGFRN Trigger: GTTCCGGAAGCCTGGTTGGCATTGACAACAAGATTG...TGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
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| CDS-3UTR CCA 90 bp | TGTCTCCTCACCAGTAGCTCTGGCCTGATGGCCATTGAACCCTTCCTGTCAATCTTTGAGGCCCTGCACTaGTTCAGAGTGACGGGAAGT | + |
|
Preference number: 4 (lower is better) Translates to: CLLTSSSGLMAIEPFLSIFEALH*FRVTGS Trigger: ACTTCCCGTCACTCTGAACCAGTGCAGGGCCTCAAA...GATTGACAGGAAGGGTTCAATGGCCATCAGGCCAGAGCTACTGGTGAGGAGACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 |
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| CDS-3UTR CCA 90 bp | ATGGGACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGACGGCAAACATGAGGTaGGACTTCACCAAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: MGQANIEPSTPIPGHWSWTANMR*DFTKSM Trigger: CATGGACTTGGTGAAGTCCCACCTCATGTTTGCCGT...CCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTCCCAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
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| CDS-3UTR TCA 90 bp | ATGGTCGAATGTCTCCTCACCAGTAGCTCTGGCCTGATGGCCATTGAACCCTTCTTAGTTGTTTGCGGATaGCCCAGAGCACCAGGTACA | + |
|
Preference number: 4 (lower is better) Translates to: MVECLLTSSSGLMAIEPFLVVCG*PRAPGT Trigger: TGTACCTGGTGCTCTGGGTCATCCGCAAACAACTAA...GAAGGGTTCAATGGCCATCAGGCCAGAGCTACTGGTGAGGAGACATTCGACCAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 |
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| CDS-3UTR CCA 90 bp | AGATGTGGCAGTATGGTCGAATGTCTCCTCACCAGTAGCTCTGGCCTGATGGCCACCATGGCCTCTTTGTaGGGCTTGACCAACTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: RCGSMVECLLTSSSGLMATMASL*GLTNFT Trigger: TGTAAAGTTGGTCAAGCCCCACAAAGAGGCCATGGT...GGCCATCAGGCCAGAGCTACTGGTGAGGAGACATTCGACCATACTGCCACATCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS-3UTR CCA 90 bp | CCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCATGGGCATTAAAGCTACATACGGCAAACATGAGGTaGGACTTCACCAAGTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: PSTPIPGHWSWAWALKLHTANMR*DFTKSM Trigger: CATGGACTTGGTGAAGTCCCACCTCATGTTTGCCGT...ATGTAGCTTTAATGCCCATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
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| CDS-3UTR GCA 90 bp | GACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCATTTCCGGAACCACGATTaGTGGTCTGAGAGATATACA | + |
|
Preference number: 4 (lower is better) Translates to: DRPILSLQLPSLGTGVGHFRNHD*WSERYT Trigger: TGTATATCTCTCAGACCAGCAATCGTGGTTCCGGAA...ATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141733.8 |
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| CDS-3UTR CCA 90 bp | TTCCTGTCAATCTTCCGTAAGAGTGAGGTGGGGGCTTTCAAAGGATCTGGGGCTACCATGGCCTCTTTGTaGGGCTTGACCAACTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: FLSIFRKSEVGAFKGSGATMASL*GLTNFT Trigger: TGTAAAGTTGGTCAAGCCCCACAAAGAGGCCATGGT...AGCCCCAGATCCTTTGAAAGCCCCCACCTCACTCTTACGGAAGATTGACAGGAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| 3UTR CAA 72 bp | ATTTTCTGGCATCTTCTCCAGGGTGGACCTGGGATCTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: IFWHLLQGGPGI*CVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACAAGATCCCAGGTCCACCCTGGAGAAGATGCCAGAAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| CDS GCA 90 bp | GAGGGCCCGAGCCTGGGGAGCCCCGAGGATGGCAGCTGGGCCAGCTaGTCCGGGCTGGCCAGGGCGCGCAGCAATCCATTCTCCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: EGPSLGSPEDGSWAS*SGLARARSNPFSCS Trigger: GGAGCAGGAGAATGGATTGCTGCGCGCCCTGGCCAGCCCGGAGCAGCTGGCCCAGCTGCCATCCTCGGGGCTCCCCAGGCTCGGGCCCTC 73% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
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| CDS CCA 90 bp | TTGGGTGCAGAGGGCCCGAGCCTGGGGAGCCCCGAGGATGGCAGCTaGGCCAGCTGCTCCGGGCTGGCCAGGGCGCGCAGCAATCCATTC | + |
|
Preference number: 5 (lower is better) Translates to: LGAEGPSLGSPEDGS*ASCSGLARARSNPF Trigger: GAATGGATTGCTGCGCGCCCTGGCCAGCCCGGAGCAGCTGGCCCAGCTGCCATCCTCGGGGCTCCCCAGGCTCGGGCCCTCTGCACCCAA 72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
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| CDS GCA 90 bp | GCCAGCTGCTCCGGGCTGGCCAGGGCGCGCAGCAATCCATTCTCCTaGTCCAATGCAGCGTTCCGCTCTGCCAGGTCTCGGATCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ASCSGLARARSNPFS*SNAAFRSARSRICS Trigger: GGAGCAGATCCGAGACCTGGCAGAGCGGAACGCTGCATTGGAGCAGGAGAATGGATTGCTGCGCGCCCTGGCCAGCCCGGAGCAGCTGGC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
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| CDS CCA 90 bp | ACGGGCCAGGCTGAGGCTCTGGGCTGCTGCGGCTCCAAATGGGTCTaGAGACTTATGGACCAGGCTGGCATCGAAGTAGAGGGCTGGGGA | + |
|
Preference number: 5 (lower is better) Translates to: TGQAEALGCCGSKWV*RLMDQAGIEVEGWG Trigger: TCCCCAGCCCTCTACTTCGATGCCAGCCTGGTCCATAAGTCTCCAGACCCATTTGGAGCCGCAGCAGCCCAGAGCCTCAGCCTGGCCCGT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
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| CDS-3UTR CAA 90 bp | GCATGGGCATTAAAGCTACATAGGAAGAGGGGGCAGGCTGCCGGCACAAGGCGCGTGACAGTGGAGGGGTaGCGGCTGCTGAACCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: AWALKLHRKRGQAAGTRRVTVEG*RLLNPQ Trigger: CTGGGGGTTCAGCAGCCGCAACCCCTCCACTGTCAC...GCGCCTTGTGCCGGCAGCCTGCCCCCTCTTCCTATGTAGCTTTAATGCCCATGC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| CDS GCA 90 bp | ACCGCTGATAGCCAACATGGAACGGGCCAGGCTGAGGCTCTGGGCTaGTGCGGCTCCAAATGGGTCTGGAGACTTATGGACCAGGCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: TADSQHGTGQAEALG*CGSKWVWRLMDQAG Trigger: GCCAGCCTGGTCCATAAGTCTCCAGACCCATTTGGAGCCGCAGCAGCCCAGAGCCTCAGCCTGGCCCGTTCCATGTTGGCTATCAGCGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
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| CDS CCA 90 bp | CATGGAACGGGCCAGGCTGAGGCTCTGGGCTGCTGCGGCTCCAAATaGGTCTGGAGACTTATGGACCAGGCTGGCATCGAAGTAGAGGGC | + |
|
Preference number: 5 (lower is better) Translates to: HGTGQAEALGCCGSK*VWRLMDQAGIEVEG Trigger: GCCCTCTACTTCGATGCCAGCCTGGTCCATAAGTCTCCAGACCCATTTGGAGCCGCAGCAGCCCAGAGCCTCAGCCTGGCCCGTTCCATG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
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| CDS GCA 90 bp | GCTGATAGCCAACATGGAACGGGCCAGGCTGAGGCTCTGGGCTGCTaGGGCTCCAAATGGGTCTGGAGACTTATGGACCAGGCTGGCATC | + |
|
Preference number: 5 (lower is better) Translates to: ADSQHGTGQAEALGC*GSKWVWRLMDQAGI Trigger: GATGCCAGCCTGGTCCATAAGTCTCCAGACCCATTTGGAGCCGCAGCAGCCCAGAGCCTCAGCCTGGCCCGTTCCATGTTGGCTATCAGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
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| CDS CCA 90 bp | GCCTCCAGAGGCCCCTCGAATGCCCTCCAGAAGCCGACCGAAGCTTaGAGGCTCCAGATCTCTCTCGTAAACATCCACACACGTCCACCG | + |
|
Preference number: 5 (lower is better) Translates to: ASRGPSNALQKPTEA*RLQISLVNIHTRPP Trigger: CGGTGGACGTGTGTGGATGTTTACGAGAGAGATCTGGAGCCTCCAAGCTTCGGTCGGCTTCTGGAGGGCATTCGAGGGGCCTCTGGAGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
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| CDS CCA 90 bp | GGCTGGCATCGAAGTAGAGGGCTGGGGAGTTGGGGCGAGAGTCGGTaGGAGGTACCTTTCCTGTCTCCGCTGGAGCAACTAACTCCATCC | + |
|
Preference number: 5 (lower is better) Translates to: GWHRSRGLGSWGESR*EVPFLSPLEQLTPS Trigger: GGATGGAGTTAGTTGCTCCAGCGGAGACAGGAAAGGTACCTCCCACCGACTCTCGCCCCAACTCCCCAGCCCTCTACTTCGATGCCAGCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
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| CDS CCA 90 bp | GAGACTTATGGACCAGGCTGGCATCGAAGTAGAGGGCTGGGGAGTTaGGGCGAGAGTCGGTGGGAGGTACCTTTCCTGTCTCCGCTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: ETYGPGWHRSRGLGS*GESRWEVPFLSPLE Trigger: CTCCAGCGGAGACAGGAAAGGTACCTCCCACCGACTCTCGCCCCAACTCCCCAGCCCTCTACTTCGATGCCAGCCTGGTCCATAAGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
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| CDS-3UTR CAA 90 bp | TTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAAGTCTCCACCTTAGCCTaGCCAGGTCCTGCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: FDPRPGLGAPVRCGSMVEVSTLA*PGPASW Trigger: CCAGCTGGCAGGACCTGGCAAGGCTAAGGTGGAGAC...TTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
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| CDS-3UTR CAA 90 bp | ATGGGACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGCAGATGGAGGGCCCATaGGGTGCAGAGGGCCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: MGQANIEPSTPIPGHWSWQMEGP*GAEGPS Trigger: GCTCGGGCCCTCTGCACCCAATGGGCCCTCCATCTG...CCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTCCCAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
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| CDS TCA 90 bp | CTGGGCCCGCATCCAGGTCGGCGACCATGGCCTCTTTGTGGGGCTTaGCCAACTTTACAGTGTCAGAGTCCATGGAAGCCTTCTCCGGTC | + |
|
Preference number: 5 (lower is better) Translates to: LGPHPGRRPWPLCGA*PTLQCQSPWKPSPV Trigger: GACCGGAGAAGGCTTCCATGGACTCTGACACTGTAAAGTTGGTCAAGCCCCACAAAGAGGCCATGGTCGCCGACCTGGATGCGGGCCCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS TCA 90 bp | TTCGCCTCTCCTGCCTGCGGGCCAGCTCTCTTAGTTGTTTGCGGATaGCCCAGAGCACCAGGTACACTTCCCGCAGCATCTCAGCCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: FASPACGPALLVVCG*PRAPGTLPAASQPL Trigger: CAGAGGCTGAGATGCTGCGGGAAGTGTACCTGGTGCTCTGGGTCATCCGCAAACAACTAAGAGAGCTGGCCCGCAGGCAGGAGAGGCGAA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 |
||
| CDS GCA 90 bp | GAGTCCATGGAAGCCTTCTCCGGTCCTGTCAATGGACGCTTCTCGTaGTGCTCGGACGTGCCTGGCTTGCCTAGGTGTTTCCAGAACGGG | + |
|
Preference number: 5 (lower is better) Translates to: ESMEAFSGPVNGRFS*CSDVPGLPRCFQNG Trigger: CCCGTTCTGGAAACACCTAGGCAAGCCAGGCACGTCCGAGCAGCACGAGAAGCGTCCATTGACAGGACCGGAGAAGGCTTCCATGGACTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS CCA 90 bp | TGGGTCTGGAGACTTATGGACCAGGCTGGCATCGAAGTAGAGGGCTaGGGAGTTGGGGCGAGAGTCGGTGGGAGGTACCTTTCCTGTCTC | + |
|
Preference number: 5 (lower is better) Translates to: WVWRLMDQAGIEVEG*GVGARVGGRYLSCL Trigger: GAGACAGGAAAGGTACCTCCCACCGACTCTCGCCCCAACTCCCCAGCCCTCTACTTCGATGCCAGCCTGGTCCATAAGTCTCCAGACCCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
||
| CDS-3UTR CAA 90 bp | AGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTCCTCAGGCTCTCCCAAACCTaGGGGCAGCTTCACCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: RPGLGAPVRCGSMVECLLRLSQT*GQLHHP Trigger: CGGGTGGTGAAGCTGCCCCAAGGTTTGGGAGAGCCT...GAGGAGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS TCA 90 bp | AGGGGTGCTTATGCCCAAACTAGCCAGCTCCAACCTAGAATCCAATaGTCTGCCTCCGGTGCCTCCAGAGGCCCCTCGAATGCCCTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RGAYAQTSQLQPRIQ*SASGASRGPSNALQ Trigger: CTGGAGGGCATTCGAGGGGCCTCTGGAGGCACCGGAGGCAGATCATTGGATTCTAGGTTGGAGCTGGCTAGTTTGGGCATAAGCACCCCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
||
| CDS CCA 90 bp | AGCATCCCTGGGCCCGCATCCAGGTCGGCGACCATGGCCTCTTTGTaGGGCTTGACCAACTTTACAGTGTCAGAGTCCATGGAAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: SIPGPASRSATMASL*GLTNFTVSESMEAF Trigger: GAAGGCTTCCATGGACTCTGACACTGTAAAGTTGGTCAAGCCCCACAAAGAGGCCATGGTCGCCGACCTGGATGCGGGCCCAGGGATGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| CDS CCA 90 bp | CACGATTCGAACGGCTCTCTTGATCACGCACAGGAGATCTTTCCTTaGCTGAGGGCAGCACACAGGGTTCGAGCATCCCTGGGCCCGCAT | + |
|
Preference number: 5 (lower is better) Translates to: HDSNGSLDHAQEIFP*LRAAHRVRASLGPH Trigger: ATGCGGGCCCAGGGATGCTCGAACCCTGTGTGCTGCCCTCAGCCAAGGAAAGATCTCCTGTGCGTGATCAAGAGAGCCGTTCGAATCGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTTCGGACGTGCCTGGCTaGCCTAGGTGTTTCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: PQAWSWGSSEMWQYGRMSSDVPG*PRCFQN Trigger: GTTCTGGAAACACCTAGGCAAGCCAGGCACGTCCGA...AGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| CDS-3UTR CAA 90 bp | CTCTCCTGCCTGCGGGCCAGCTCTCTTAGTTGTTTGCGGATGACCCAGAGCACCGCGACCATGGCCTCTTaGTGGGGCTTGACCAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: LSCLRASSLSCLRMTQSTATMAS*WGLTNF Trigger: AAAGTTGGTCAAGCCCCACAAAGAGGCCATGGTCGC...GGTGCTCTGGGTCATCCGCAAACAACTAAGAGAGCTGGCCCGCAGGCAGGAGAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000110983.3 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTACAGGAGATCTTTCCTaGGCTGAGGGCAGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: PQAWSWGSSEMWQYGRMSTGDLS*AEGSTQ Trigger: CTGTGTGCTGCCCTCAGCCAAGGAAAGATCTCCTGT...AGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| CDS-3UTR CAA 90 bp | TTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAACTTCGGGCATCATGTTaGAGGCCCTGCACTGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FDPRPGLGAPVRCGSMVELRASC*RPCTGS Trigger: TGAACCAGTGCAGGGCCTCAAACATGATGCCCGAAG...TTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 |
||
| CDS-3UTR CAA 90 bp | CCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTCTTCGGGCATCATGTTaGAGGCCCTGCACTGGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: PQAWSWGSSEMWQYGRMSLRASC*RPCTGS Trigger: TGAACCAGTGCAGGGCCTCAAACATGATGCCCGAAG...AGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 |
||
| CDS-3UTR CAA 90 bp | CCTTCAACTCCCATCCCTGGGCACTGGAGTTGGGCATGGGCATTAAAGCTACATAGGCTCTCCCAAACCTaGGGGCAGCTTCACCACCCG | + |
|
Preference number: 5 (lower is better) Translates to: PSTPIPGHWSWAWALKLHRLSQT*GQLHHP Trigger: CGGGTGGTGAAGCTGCCCCAAGGTTTGGGAGAGCCT...ATGTAGCTTTAATGCCCATGCCCAACTCCAGTGCCCAGGGATGGGAGTTGAAGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR CAA 90 bp | TTCCTGTCAATCTTCCGTAAGAGTGAGGTGGGGGCTTTCAAAGGATCTGGGGCTGTGACAGTGGAGGGGTaGCGGCTGCTGAACCCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: FLSIFRKSEVGAFKGSGAVTVEG*RLLNPQ Trigger: CTGGGGGTTCAGCAGCCGCAACCCCTCCACTGTCAC...AGCCCCAGATCCTTTGAAAGCCCCCACCTCACTCTTACGGAAGATTGACAGGAA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR CAA 90 bp | TGTCAATCTTCCGTAAGAGTGAGGTGGGGGCTTTCAAAGGATCTGGGGCTCCCCTCGGACGTGCCTGGCTaGCCTAGGTGTTTCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: CQSSVRVRWGLSKDLGLPSDVPG*PRCFQN Trigger: GTTCTGGAAACACCTAGGCAAGCCAGGCACGTCCGA...GGGGAGCCCCAGATCCTTTGAAAGCCCCCACCTCACTCTTACGGAAGATTGACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| CDS-3UTR CAA 90 bp | TCGGGCATCATGTTTGAGGCCCTGCACTGGTTCAGAGTGACGGGAAGTATGGGATCGGACGTGCCTGGCTaGCCTAGGTGTTTCCAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: SGIMFEALHWFRVTGSMGSDVPG*PRCFQN Trigger: GTTCTGGAAACACCTAGGCAAGCCAGGCACGTCCGA...TCCCATACTTCCCGTCACTCTGAACCAGTGCAGGGCCTCAAACATGATGCCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110983.3 |
||
| CDS-3UTR CAA 90 bp | GTGTTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGCCTCTTTGTGGGGCTaGACCAACTTTACAGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: VFDPRPGLGAPVRCGSMVASLWG*TNFTVS Trigger: TGACACTGTAAAGTTGGTCAAGCCCCACAAAGAGGC...GACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAACAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| CDS-3UTR CAA 90 bp | AGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTCCTCGCGACCATGGCCTCTTaGTGGGGCTTGACCAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: RPGLGAPVRCGSMVECLLATMAS*WGLTNF Trigger: AAAGTTGGTCAAGCCCCACAAAGAGGCCATGGTCGC...GAGGAGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| CDS-3UTR CAA 90 bp | AGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTCGAATGTCTCCTCACAGGAGATCTTTCCTaGGCTGAGGGCAGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: RPGLGAPVRCGSMVECLLTGDLS*AEGSTQ Trigger: CTGTGTGCTGCCCTCAGCCAAGGAAAGATCTCCTGT...GAGGAGACATTCGACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| CDS-3UTR CAA 90 bp | CAAGCCTCGGTTGGGAGTCAGGGCCACCCCACAGATACAGTAACAAACATTTACGTCTCCACCTTAGCCTaGCCAGGTCCTGCCAGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: QASVGSQGHPTDTVTNIYVSTLA*PGPASW Trigger: CCAGCTGGCAGGACCTGGCAAGGCTAAGGTGGAGAC...GTAAATGTTTGTTACTGTATCTGTGGGGTGGCCCTGACTCCCAACCGAGGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS-3UTR CAA 90 bp | CTCGGTTGGGAGTCAGGGCCACCCCACAGATACAGTAACAAACATTTACAATACCAGATGGAGGGCCCATaGGGTGCAGAGGGCCCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: LGWESGPPHRYSNKHLQYQMEGP*GAEGPS Trigger: GCTCGGGCCCTCTGCACCCAATGGGCCCTCCATCTG...GTATTGTAAATGTTTGTTACTGTATCTGTGGGGTGGCCCTGACTCCCAACCGAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS TCA 90 bp | ATCAGAGAACGGCTGTCACGGCTGTCACGATTCGAACGGCTCTCTTaGTCACGCACAGGAGATCTTTCCTTGGCTGAGGGCAGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: IRERLSRLSRFERLS*SRTGDLSLAEGSTQ Trigger: CTGTGTGCTGCCCTCAGCCAAGGAAAGATCTCCTGTGCGTGATCAAGAGAGCCGTTCGAATCGTGACAGCCGTGACAGCCGTTCTCTGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| CDS-3UTR CAA 90 bp | ATGGTCGAATGTCTCCTCACCAGTAGCTCTGGCCTGATGGCCATTGAACCCTTCGCGACCATGGCCTCTTaGTGGGGCTTGACCAACTTT | + |
|
Preference number: 5 (lower is better) Translates to: MVECLLTSSSGLMAIEPFATMAS*WGLTNF Trigger: AAAGTTGGTCAAGCCCCACAAAGAGGCCATGGTCGC...GAAGGGTTCAATGGCCATCAGGCCAGAGCTACTGGTGAGGAGACATTCGACCAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| CDS-3UTR CAA 90 bp | TGTCTCCTCACCAGTAGCTCTGGCCTGATGGCCATTGAACCCTTCCTGTCAATCACAGGAGATCTTTCCTaGGCTGAGGGCAGCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: CLLTSSSGLMAIEPFLSITGDLS*AEGSTQ Trigger: CTGTGTGCTGCCCTCAGCCAAGGAAAGATCTCCTGT...GATTGACAGGAAGGGTTCAATGGCCATCAGGCCAGAGCTACTGGTGAGGAGACA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| CDS-3UTR CAA 90 bp | TGTGTTCGACCCCAGGCCTGGTCTTGGGGCTCCAGTGAGATGTGGCAGTATGGTGCTTGTTCAATCTTGTaGTCAATGCCAACCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: CVRPQAWSWGSSEMWQYGACSIL*SMPTRL Trigger: AAGCCTGGTTGGCATTGACAACAAGATTGAACAAGC...ACCATACTGCCACATCTCACTGGAGCCCCAAGACCAGGCCTGGGGTCGAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR CAA 90 bp | TTAAAGCTACATAGGAAGAGGGGGCAGGCTGCCGGCACAAGGCGCAACAGCCAGGCTTGTTCAATCTTGTaGTCAATGCCAACCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: LKLHRKRGQAAGTRRNSQACSIL*SMPTRL Trigger: AAGCCTGGTTGGCATTGACAACAAGATTGAACAAGC...CTGGCTGTTGCGCCTTGTGCCGGCAGCCTGCCCCCTCTTCCTATGTAGCTTTAA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR CAA 90 bp | GGCAGTATGGTCGAATGTCTCCTCACCAGTAGCTCTGGCCTGATGGCCATTGAAGCCTCTTTGTGGGGCTaGACCAACTTTACAGTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: GSMVECLLTSSSGLMAIEASLWG*TNFTVS Trigger: TGACACTGTAAAGTTGGTCAAGCCCCACAAAGAGGC...TTCAATGGCCATCAGGCCAGAGCTACTGGTGAGGAGACATTCGACCATACTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
||
| CDS-3UTR CAA 90 bp | GGGATGGGACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTGCTTGTTCAATCTTGTaGTCAATGCCAACCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GMGQANIEPSTPIPGHWSACSIL*SMPTRL Trigger: AAGCCTGGTTGGCATTGACAACAAGATTGAACAAGC...ACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTCCCATCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000141733.8 |
||
| CDS-3UTR CAA 90 bp | GGGCACTGGAGTTGGGCATGGGCATTAAAGCTACATAGGAAGAGGGGGCAGGCTGCTTGTTCAATCTTGTaGTCAATGCCAACCAGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: GHWSWAWALKLHRKRGQAACSIL*SMPTRL Trigger: AAGCCTGGTTGGCATTGACAACAAGATTGAACAAGC...AGCCTGCCCCCTCTTCCTATGTAGCTTTAATGCCCATGCCCAACTCCAGTGCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR CAA 90 bp | AGTTGGGCATGGGCATTAAAGCTACATAGGAAGAGGGGGCAGGCTGCCGGCACAATGGCTTGTTCAATCTaGTTGTCAATGCCAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: SWAWALKLHRKRGQAAGTMACSI*LSMPTR Trigger: CCTGGTTGGCATTGACAACAAGATTGAACAAGCCAT...TGTGCCGGCAGCCTGCCCCCTCTTCCTATGTAGCTTTAATGCCCATGCCCAACT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR CAA 90 bp | AGATGTGGCAGTATGGTCGAATGTCTCCTCACCAGTAGCTCTGGCCTGATGGCCATGGCTTGTTCAATCTaGTTGTCAATGCCAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: RCGSMVECLLTSSSGLMAMACSI*LSMPTR Trigger: CCTGGTTGGCATTGACAACAAGATTGAACAAGCCAT...GGCCATCAGGCCAGAGCTACTGGTGAGGAGACATTCGACCATACTGCCACATCT 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
||
| CDS-3UTR CAA 90 bp | ATGGGACAGGCCAATATTGAGCCTTCAACTCCCATCCCTGGGCACTGGAGTTGGATGGCTTGTTCAATCTaGTTGTCAATGCCAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: MGQANIEPSTPIPGHWSWMACSI*LSMPTR Trigger: CCTGGTTGGCATTGACAACAAGATTGAACAAGCCAT...CCAACTCCAGTGCCCAGGGATGGGAGTTGAAGGCTCAATATTGGCCTGTCCCAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS-3UTR CAA 90 bp | CAAGCCTCGGTTGGGAGTCAGGGCCACCCCACAGATACAGTAACAAACATTTACATGGCTTGTTCAATCTaGTTGTCAATGCCAACCAGG | + |
|
Preference number: 5 (lower is better) Translates to: QASVGSQGHPTDTVTNIYMACSI*LSMPTR Trigger: CCTGGTTGGCATTGACAACAAGATTGAACAAGCCAT...GTAAATGTTTGTTACTGTATCTGTGGGGTGGCCCTGACTCCCAACCGAGGCTTG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
||
| CDS CCA 72 bp | GAGGGCCCGAGCCTGGGGAGCCCCGAGGATGGCAGCTaGGCCAGCTGCTCCGGGCTGGCCAGGGCGCGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: EGPSLGSPEDGS*ASCSGLARARS Trigger: GCTGCGCGCCCTGGCCAGCCCGGAGCAGCTGGCCCAGCTGCCATCCTCGGGGCTCCCCAGGCTCGGGCCCTC 79% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS CCA 72 bp | AGATGGAGGGCCCATTGGGTGCAGAGGGCCCGAGCCTaGGGAGCCCCGAGGATGGCAGCTGGGCCAGCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: RWRAHWVQRARA*GAPRMAAGPAA Trigger: AGCAGCTGGCCCAGCTGCCATCCTCGGGGCTCCCCAGGCTCGGGCCCTCTGCACCCAATGGGCCCTCCATCT 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS GCA 72 bp | TCCGGGCTGGCCAGGGCGCGCAGCAATCCATTCTCCTaGTCCAATGCAGCGTTCCGCTCTGCCAGGTCTCGG | + |
|
Preference number: 6 (lower is better) Translates to: SGLARARSNPFS*SNAAFRSARSR Trigger: CCGAGACCTGGCAGAGCGGAACGCTGCATTGGAGCAGGAGAATGGATTGCTGCGCGCCCTGGCCAGCCCGGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS CCA 72 bp | AGCGAGAGCCGGTGGGACAGGGGAATCCGAAGCCCCTaGGCTTCCTGGGCCCTCATAGTCCGTGGTGACGCT | + |
|
Preference number: 6 (lower is better) Translates to: SESRWDRGIRSP*ASWALIVRGDA Trigger: AGCGTCACCACGGACTATGAGGGCCCAGGAAGCCCAGGGGCTTCGGATTCCCCTGTCCCACCGGCTCTCGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
||
| CDS CCA 72 bp | CGGGCGGAGCCAAGAGGTGGGGCCCTGAGACAGGCCTaGCTGCGGGATAGGGGTGCTTATGCCCAAACTAGC | + |
|
Preference number: 6 (lower is better) Translates to: RAEPRGGALRQA*LRDRGAYAQTS Trigger: GCTAGTTTGGGCATAAGCACCCCTATCCCGCAGCCAGGCCTGTCTCAGGGCCCCACCTCTTGGCTCCGCCCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
||
| CDS CCA 72 bp | CGGTGGGACAGGGGAATCCGAAGCCCCTGGGCTTCCTaGGCCCTCATAGTCCGTGGTGACGCTGGTGATCTG | + |
|
Preference number: 6 (lower is better) Translates to: RWDRGIRSPWAS*ALIVRGDAGDL Trigger: CAGATCACCAGCGTCACCACGGACTATGAGGGCCCAGGAAGCCCAGGGGCTTCGGATTCCCCTGTCCCACCG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
||
| CDS GCA 72 bp | ATGATCTGCCTCCGGTGCCTCCAGAGGCCCCTCGAATaGCCTCCAGAAGCCGACCGAAGCTTGGAGGCTCCA | + |
|
Preference number: 6 (lower is better) Translates to: MICLRCLQRPLE*PPEADRSLEAP Trigger: TGGAGCCTCCAAGCTTCGGTCGGCTTCTGGAGGGCATTCGAGGGGCCTCTGGAGGCACCGGAGGCAGATCAT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
||
| CDS GCA 72 bp | GGCCAGGGCGCGCAGCAATCCATTCTCCTGCTCCAATaGAGCGTTCCGCTCTGCCAGGTCTCGGATCTGCTC | + |
|
Preference number: 6 (lower is better) Translates to: GQGAQQSILLLQ*SVPLCQVSDLL Trigger: GAGCAGATCCGAGACCTGGCAGAGCGGAACGCTGCATTGGAGCAGGAGAATGGATTGCTGCGCGCCCTGGCC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
||
| CDS CAA 72 bp | CGTCCACCGACCTCGACGATAAGGCTCTCCCAAACCTaGGGGCAGCTTCACCACCCGGAAACGGGAGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: RPPTSTIRLSQT*GQLHHPETGGR Trigger: CCTGCCTCCCGTTTCCGGGTGGTGAAGCTGCCCCAAGGTTTGGGAGAGCCTTATCGTCGAGGTCGGTGGACG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
||
| CDS CAA 90 bp | ATCCACACACGTCCACCGACCTCGACGATAAGGCTCTCCCAAACCTaGGGGCAGCTTCACCACCCGGAAACGGGAGGCAGGGGCTCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: IHTRPPTSTIRLSQT*GQLHHPETGGRGSR Trigger: CCTGGAGCCCCTGCCTCCCGTTTCCGGGTGGTGAAGCTGCCCCAAGGTTTGGGAGAGCCTTATCGTCGAGGTCGGTGGACGTGTGTGGAT 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
||
| CDS CCA 72 bp | GGACCAGGCTGGCATCGAAGTAGAGGGCTGGGGAGTTaGGGCGAGAGTCGGTGGGAGGTACCTTTCCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: GPGWHRSRGLGS*GESRWEVPFLS Trigger: AGACAGGAAAGGTACCTCCCACCGACTCTCGCCCCAACTCCCCAGCCCTCTACTTCGATGCCAGCCTGGTCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
||
| CDS CCA 72 bp | GGCCAGGCTGAGGCTCTGGGCTGCTGCGGCTCCAAATaGGTCTGGAGACTTATGGACCAGGCTGGCATCGAA | + |
|
Preference number: 6 (lower is better) Translates to: GQAEALGCCGSK*VWRLMDQAGIE Trigger: TTCGATGCCAGCCTGGTCCATAAGTCTCCAGACCCATTTGGAGCCGCAGCAGCCCAGAGCCTCAGCCTGGCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
||
| CDS CAA 90 bp | GGTCCTGTCAATGGACGCTTCTCGTGCTGCTCGGACGTGCCTGGCTaGCCTAGGTGTTTCCAGAACGGGACCCAACTGGGCACCTTTCGC | + |
|
Preference number: 6 (lower is better) Translates to: GPVNGRFSCCSDVPG*PRCFQNGTQLGTFR Trigger: GCGAAAGGTGCCCAGTTGGGTCCCGTTCTGGAAACACCTAGGCAAGCCAGGCACGTCCGAGCAGCACGAGAAGCGTCCATTGACAGGACC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000110983.3 |
||
| CDS CAA 90 bp | CGCCGTCTTCGCCTCTCCTGCCTGCGGGCCAGCTCTCTTAGTTGTTaGCGGATGACCCAGAGCACCAGGTACACTTCCCGCAGCATCTCA | + |
|
Preference number: 6 (lower is better) Translates to: RRLRLSCLRASSLSC*RMTQSTRYTSRSIS Trigger: TGAGATGCTGCGGGAAGTGTACCTGGTGCTCTGGGTCATCCGCAAACAACTAAGAGAGCTGGCCCGCAGGCAGGAGAGGCGAAGACGGCG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 |
||
| CDS CCA 72 bp | CGAAGTAGAGGGCTGGGGAGTTGGGGCGAGAGTCGGTaGGAGGTACCTTTCCTGTCTCCGCTGGAGCAACTA | + |
|
Preference number: 6 (lower is better) Translates to: RSRGLGSWGESR*EVPFLSPLEQL Trigger: TAGTTGCTCCAGCGGAGACAGGAAAGGTACCTCCCACCGACTCTCGCCCCAACTCCCCAGCCCTCTACTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
||
| CDS CAA 72 bp | AATGGACGCTTCTCGTGCTGCTCGGACGTGCCTGGCTaGCCTAGGTGTTTCCAGAACGGGACCCAACTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: NGRFSCCSDVPG*PRCFQNGTQLG Trigger: GCCCAGTTGGGTCCCGTTCTGGAAACACCTAGGCAAGCCAGGCACGTCCGAGCAGCACGAGAAGCGTCCATT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000110983.3 |
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| CDS CAA 72 bp | CCTGGGCCCGCATCCAGGTCGGCGACCATGGCCTCTTaGTGGGGCTTGACCAACTTTACAGTGTCAGAGTCC | + |
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Preference number: 6 (lower is better) Translates to: PGPASRSATMAS*WGLTNFTVSES Trigger: GGACTCTGACACTGTAAAGTTGGTCAAGCCCCACAAAGAGGCCATGGTCGCCGACCTGGATGCGGGCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS CAA 90 bp | CCTGGGCCCGCATCCAGGTCGGCGACCATGGCCTCTTTGTGGGGCTaGACCAACTTTACAGTGTCAGAGTCCATGGAAGCCTTCTCCGGT | + |
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Preference number: 6 (lower is better) Translates to: PGPASRSATMASLWG*TNFTVSESMEAFSG Trigger: ACCGGAGAAGGCTTCCATGGACTCTGACACTGTAAAGTTGGTCAAGCCCCACAAAGAGGCCATGGTCGCCGACCTGGATGCGGGCCCAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS CAA 90 bp | TCGAGCATCCCTGGGCCCGCATCCAGGTCGGCGACCATGGCCTCTTaGTGGGGCTTGACCAACTTTACAGTGTCAGAGTCCATGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: SSIPGPASRSATMAS*WGLTNFTVSESMEA Trigger: GGCTTCCATGGACTCTGACACTGTAAAGTTGGTCAAGCCCCACAAAGAGGCCATGGTCGCCGACCTGGATGCGGGCCCAGGGATGCTCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS CAA 90 bp | TGCCTCCAGAGGCCCCTCGAATGCCCTCCAGAAGCCGACCGAAGCTaGGAGGCTCCAGATCTCTCTCGTAAACATCCACACACGTCCACC | + |
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Preference number: 6 (lower is better) Translates to: CLQRPLECPPEADRS*EAPDLSRKHPHTST Trigger: GGTGGACGTGTGTGGATGTTTACGAGAGAGATCTGGAGCCTCCAAGCTTCGGTCGGCTTCTGGAGGGCATTCGAGGGGCCTCTGGAGGCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
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| CDS TCA 72 bp | GCTCTCTTGATCACGCACAGGAGATCTTTCCTTGGCTaGGGGCAGCACACAGGGTTCGAGCATCCCTGGGCC | + |
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Preference number: 6 (lower is better) Translates to: ALLITHRRSFLG*GQHTGFEHPWA Trigger: GGCCCAGGGATGCTCGAACCCTGTGTGCTGCCCTCAGCCAAGGAAAGATCTCCTGTGCGTGATCAAGAGAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS TCA 72 bp | CCTGCCTGCGGGCCAGCTCTCTTAGTTGTTTGCGGATaGCCCAGAGCACCAGGTACACTTCCCGCAGCATCT | + |
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Preference number: 6 (lower is better) Translates to: PACGPALLVVCG*PRAPGTLPAAS Trigger: AGATGCTGCGGGAAGTGTACCTGGTGCTCTGGGTCATCCGCAAACAACTAAGAGAGCTGGCCCGCAGGCAGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 |
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| CDS TCA 72 bp | CCCTGGCGCCATCCCCACCACTCGCATCTCATAAGATaGTACCAAGGACTTCACAGAGACCCCCGGCTGGGA | + |
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Preference number: 6 (lower is better) Translates to: PWRHPHHSHLIR*YQGLHRDPRLG Trigger: TCCCAGCCGGGGGTCTCTGTGAAGTCCTTGGTATCATCTTATGAGATGCGAGTGGTGGGGATGGCGCCAGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000110985.2 |
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| CDS GCA 72 bp | GAAGCCTTCTCCGGTCCTGTCAATGGACGCTTCTCGTaGTGCTCGGACGTGCCTGGCTTGCCTAGGTGTTTC | + |
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Preference number: 6 (lower is better) Translates to: EAFSGPVNGRFS*CSDVPGLPRCF Trigger: GAAACACCTAGGCAAGCCAGGCACGTCCGAGCAGCACGAGAAGCGTCCATTGACAGGACCGGAGAAGGCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS CCA 72 bp | GGGCCCGCATCCAGGTCGGCGACCATGGCCTCTTTGTaGGGCTTGACCAACTTTACAGTGTCAGAGTCCATG | + |
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Preference number: 6 (lower is better) Translates to: GPASRSATMASL*GLTNFTVSESM Trigger: CATGGACTCTGACACTGTAAAGTTGGTCAAGCCCCACAAAGAGGCCATGGTCGCCGACCTGGATGCGGGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS CCA 72 bp | AGACTTATGGACCAGGCTGGCATCGAAGTAGAGGGCTaGGGAGTTGGGGCGAGAGTCGGTGGGAGGTACCTT | + |
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Preference number: 6 (lower is better) Translates to: RLMDQAGIEVEG*GVGARVGGRYL Trigger: AAGGTACCTCCCACCGACTCTCGCCCCAACTCCCCAGCCCTCTACTTCGATGCCAGCCTGGTCCATAAGTCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
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| CDS CCA 72 bp | GCTGAGGCTCTGGGCTGCTGCGGCTCCAAATGGGTCTaGAGACTTATGGACCAGGCTGGCATCGAAGTAGAG | + |
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Preference number: 6 (lower is better) Translates to: AEALGCCGSKWV*RLMDQAGIEVE Trigger: CTCTACTTCGATGCCAGCCTGGTCCATAAGTCTCCAGACCCATTTGGAGCCGCAGCAGCCCAGAGCCTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
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| CDS CCA 72 bp | GCCTCTGACGTCCCCAATGCCGACCTGGTCCTCGTGTaGGAGGAAACTGAGCCAGCACTCATAGAAGACTTC | + |
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Preference number: 6 (lower is better) Translates to: ASDVPNADLVLV*EETEPALIEDF Trigger: GAAGTCTTCTATGAGTGCTGGCTCAGTTTCCTCCCACACGAGGACCAGGTCGGCATTGGGGACGTCAGAGGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 |
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| CDS CCA 72 bp | GGCCCCTCGAATGCCCTCCAGAAGCCGACCGAAGCTTaGAGGCTCCAGATCTCTCTCGTAAACATCCACACA | + |
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Preference number: 6 (lower is better) Translates to: GPSNALQKPTEA*RLQISLVNIHT Trigger: TGTGTGGATGTTTACGAGAGAGATCTGGAGCCTCCAAGCTTCGGTCGGCTTCTGGAGGGCATTCGAGGGGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
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| CDS CAA 72 bp | AGGCCCCTCGAATGCCCTCCAGAAGCCGACCGAAGCTaGGAGGCTCCAGATCTCTCTCGTAAACATCCACAC | + |
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Preference number: 6 (lower is better) Translates to: RPLECPPEADRS*EAPDLSRKHPH Trigger: GTGTGGATGTTTACGAGAGAGATCTGGAGCCTCCAAGCTTCGGTCGGCTTCTGGAGGGCATTCGAGGGGCCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
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| CDS CAA 72 bp | AATGGACGCTTCTCGTGCTGCTCGGACGTGCCTGGCTaGCCTAGGTGTTTCCAGAACGGGACCATGGCTTGT | + |
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Preference number: 6 (lower is better) Translates to: NGRFSCCSDVPG*PRCFQNGTMAC Trigger: ACAAGCCATGGTCCCGTTCTGGAAACACCTAGGCAAGCCAGGCACGTCCGAGCAGCACGAGAAGCGTCCATT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
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| CDS CAA 90 bp | GGTCCTGTCAATGGACGCTTCTCGTGCTGCTCGGACGTGCCTGGCTaGCCTAGGTGTTTCCAGAACGGGACCATGGCTTGTTCAATCTTG | + |
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Preference number: 6 (lower is better) Translates to: GPVNGRFSCCSDVPG*PRCFQNGTMACSIL Trigger: CAAGATTGAACAAGCCATGGTCCCGTTCTGGAAACACCTAGGCAAGCCAGGCACGTCCGAGCAGCACGAGAAGCGTCCATTGACAGGACC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
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| CDS CAA 72 bp | GCATCCAGGTCGGCGACCATGGCCTCTTTGTGGGGCTaGACCAACTTTACAGTGTCAGAGTCCATGGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: ASRSATMASLWG*TNFTVSESMEA Trigger: GGCTTCCATGGACTCTGACACTGTAAAGTTGGTCAAGCCCCACAAAGAGGCCATGGTCGCCGACCTGGATGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS TCA 72 bp | CATCCAGGTCGGCGACCATGGCCTCTTTGTGGGGCTTaGCCAACTTTACAGTGTCAGAGTCCATGGAAGCCT | + |
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Preference number: 6 (lower is better) Translates to: HPGRRPWPLCGA*PTLQCQSPWKP Trigger: AGGCTTCCATGGACTCTGACACTGTAAAGTTGGTCAAGCCCCACAAAGAGGCCATGGTCGCCGACCTGGATG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS TCA 72 bp | TATGCCCAAACTAGCCAGCTCCAACCTAGAATCCAATaGTCTGCCTCCGGTGCCTCCAGAGGCCCCTCGAAT | + |
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Preference number: 6 (lower is better) Translates to: YAQTSQLQPRIQ*SASGASRGPSN Trigger: ATTCGAGGGGCCTCTGGAGGCACCGGAGGCAGATCATTGGATTCTAGGTTGGAGCTGGCTAGTTTGGGCATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000100539.10 ENSMUST00000100540.10 |
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| CDS CCA 72 bp | AGCACCTCCACCTCTTCTCGCACGGCAAACATGAGGTaGGACTTCACCAAGTCCATGGCTTGTTCAATCTTG | + |
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Preference number: 6 (lower is better) Translates to: STSTSSRTANMR*DFTKSMACSIL Trigger: CAAGATTGAACAAGCCATGGACTTGGTGAAGTCCCACCTCATGTTTGCCGTGCGAGAAGAGGTGGAGGTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000100539.10 ENSMUST00000110985.2 ENSMUST00000141733.8 |
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| CDS CAA 90 bp | GGCTTGCCTAGGTGTTTCCAGAACGGGACCATGGCTTGTTCAATCTaGTTGTCAATGCCAACCAGGCTTCCGGAACCACTATCGTCATCG | + |
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Preference number: 6 (lower is better) Translates to: GLPRCFQNGTMACSI*LSMPTRLPEPLSSS Trigger: CGATGACGATAGTGGTTCCGGAAGCCTGGTTGGCATTGACAACAAGATTGAACAAGCCATGGTCCCGTTCTGGAAACACCTAGGCAAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
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| CDS CAA 90 bp | TTGCCTAGGTGTTTCCAGAACGGGACCATGGCTTGTTCAATCTTGTaGTCAATGCCAACCAGGCTTCCGGAACCACTATCGTCATCGCTG | + |
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Preference number: 6 (lower is better) Translates to: LPRCFQNGTMACSIL*SMPTRLPEPLSSSL Trigger: CAGCGATGACGATAGTGGTTCCGGAAGCCTGGTTGGCATTGACAACAAGATTGAACAAGCCATGGTCCCGTTCTGGAAACACCTAGGCAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
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| CDS CAA 72 bp | TGGGACTTCACCAAGTCCATGGCTTGTTCAATCTTGTaGTCAATGCCAACCAGGCTTCCGGAACCACTGTGG | + |
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Preference number: 6 (lower is better) Translates to: WDFTKSMACSIL*SMPTRLPEPLW Trigger: CCACAGTGGTTCCGGAAGCCTGGTTGGCATTGACAACAAGATTGAACAAGCCATGGACTTGGTGAAGTCCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110985.2 |
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| CDS CAA 72 bp | AGGTGGGACTTCACCAAGTCCATGGCTTGTTCAATCTaGTTGTCAATGCCAACCAGGCTTCCGGAACCACTG | + |
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Preference number: 6 (lower is better) Translates to: RWDFTKSMACSI*LSMPTRLPEPL Trigger: CAGTGGTTCCGGAAGCCTGGTTGGCATTGACAACAAGATTGAACAAGCCATGGACTTGGTGAAGTCCCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110985.2 |
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| CDS CAA 72 bp | AGGTGGGACTTCACCAAGTCCATGGCTTGTTCAATCTaGTTGTCAATGCCAACCAGGCTTCCGGAACCACGA | + |
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Preference number: 6 (lower is better) Translates to: RWDFTKSMACSI*LSMPTRLPEPR Trigger: TCGTGGTTCCGGAAGCCTGGTTGGCATTGACAACAAGATTGAACAAGCCATGGACTTGGTGAAGTCCCACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141733.8 |
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| CDS TCA 72 bp | GACTGTAGCATGGAGAACATGAACATAGAGACTGAGTaGACTAGGGTCATCAGAGAACGGCTGTCACGGCTG | + |
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Preference number: 6 (lower is better) Translates to: DCSMENMNIETE*TRVIRERLSRL Trigger: CAGCCGTGACAGCCGTTCTCTGATGACCCTAGTTCACTCAGTCTCTATGTTCATGTTCTCCATGCTACAGTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000031738.5 ENSMUST00000100540.10 ENSMUST00000110983.3 |
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| CDS CAA 72 bp | TGGGACTTCACCAAGTCCATGGCTTGTTCAATCTTGTaGTCAATGCCAACCAGGCTTCCGGAACCACTATCG | + |
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Preference number: 6 (lower is better) Translates to: WDFTKSMACSIL*SMPTRLPEPLS Trigger: CGATAGTGGTTCCGGAAGCCTGGTTGGCATTGACAACAAGATTGAACAAGCCATGGACTTGGTGAAGTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| CDS CAA 72 bp | AGGTGGGACTTCACCAAGTCCATGGCTTGTTCAATCTaGTTGTCAATGCCAACCAGGCTTCCGGAACCACTA | + |
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Preference number: 6 (lower is better) Translates to: RWDFTKSMACSI*LSMPTRLPEPL Trigger: TAGTGGTTCCGGAAGCCTGGTTGGCATTGACAACAAGATTGAACAAGCCATGGACTTGGTGAAGTCCCACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100539.10 |
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| CDS CAA 72 bp | TGTTTCCAGAACGGGACCATGGCTTGTTCAATCTTGTaGTCAATGCCAACCAGGCTTCCGGAACCACTATCG | + |
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Preference number: 6 (lower is better) Translates to: CFQNGTMACSIL*SMPTRLPEPLS Trigger: CGATAGTGGTTCCGGAAGCCTGGTTGGCATTGACAACAAGATTGAACAAGCCATGGTCCCGTTCTGGAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
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| CDS CAA 72 bp | AGGTGTTTCCAGAACGGGACCATGGCTTGTTCAATCTaGTTGTCAATGCCAACCAGGCTTCCGGAACCACTA | + |
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Preference number: 6 (lower is better) Translates to: RCFQNGTMACSI*LSMPTRLPEPL Trigger: TAGTGGTTCCGGAAGCCTGGTTGGCATTGACAACAAGATTGAACAAGCCATGGTCCCGTTCTGGAAACACCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000100540.10 |
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| CDS CAA 72 bp | TGGGACTTCACCAAGTCCATGGCTTGTTCAATCTTGTaGTCAATGCCAACCAGGCTTCCGGAACCACGATTG | + |
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Preference number: 6 (lower is better) Translates to: WDFTKSMACSIL*SMPTRLPEPRL Trigger: CAATCGTGGTTCCGGAAGCCTGGTTGGCATTGACAACAAGATTGAACAAGCCATGGACTTGGTGAAGTCCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000141733.8 |
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