Pregenerated sensors for TSC22D3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031431Ensembl transcript IDs: ENSMUST00000055738.12, ENSMUST00000112996.9, ENSMUST00000123898.2
Found 78 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | TTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTGTCACTGGAGTaGACCCAGATGGGCATGTCCTTGGGACATCTCTTGGCACCAGCT | + |
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Preference number: 1 (lower is better) Translates to: LVSRDLLFVRGLSLE*TQMGMSLGHLLAPA Trigger: AGCTGGTGCCAAGAGATGTCCCAAGGACATGCCCATCTGGGTCCACTCCAGTGACAGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| 3UTR GCA 90 bp | CTGCCCCTGCCTGGAAAAGACAGAGAAGAAGAGAGAGGTTGCTTCTaGTTAGAACACAAGTGGCTTCTTCATAGGAACAGTCATTGTCAG | + |
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Preference number: 1 (lower is better) Translates to: LPLPGKDREEERGCF*LEHKWLLHRNSHCQ Trigger: CTGACAATGACTGTTCCTATGAAGAAGCCACTTGTGTTCTAAGCAGAAGCAACCTCTCTCTTCTTCTCTGTCTTTTCCAGGCAGGGGCAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| 3UTR-3UTR TCA 90 bp | CCCTGGGAGCCCCCAGGGCCCGGTGACACGACAGGCTCACTGGCTTGGTGTTACGTAAAGTTCTCCACATaGGATGACGCTTGGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: PWEPPGPGDTTGSLAWCYVKFST*DDAWGA Trigger: GGCTCCCCAAGCGTCATCTCATGTGGAGAACTTTAC...GTAACACCAAGCCAGTGAGCCTGTCGTGTCACCGGGCCCTGGGGGCTCCCAGGG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| 3UTR-3UTR CCA 90 bp | GACAGGCTCACTGGCTTGGTGTTACTAGGCCCCATGCAACTTAGTCTCCAGAGATGGAGTGGACCCAGATaGGCATGTCCTTGGGACATC | + |
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Preference number: 2 (lower is better) Translates to: DRLTGLVLLGPMQLSLQRWSGPR*ACPWDI Trigger: GATGTCCCAAGGACATGCCCATCTGGGTCCACTCCA...TCTCTGGAGACTAAGTTGCATGGGGCCTAGTAACACCAAGCCAGTGAGCCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| 3UTR-3UTR TCA 90 bp | CCATGCAACTTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTGTCACTGGAGGTAAAGTTCTCCACATaGGATGACGCTTGGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: PCNLVSRDLLFVRGLSLEVKFST*DDAWGA Trigger: GGCTCCCCAAGCGTCATCTCATGTGGAGAACTTTAC...CTCCAGTGACAGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAAGTTGCATGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| 3UTR-3UTR TCA 90 bp | GAGTGGACCCAGATGGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTAGTTCTCCACATGAGATaGCGCTTGGGGAGCCAAAAA | + |
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Preference number: 2 (lower is better) Translates to: EWTQMGMSLGHLLAPAMLVLHMR*RLGSQK Trigger: TTTTTGGCTCCCCAAGCGTCATCTCATGTGGAGAAC...TAACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCCATCTGGGTCCACTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| 3UTR-3UTR TCA 90 bp | TTACTAGGCCCCATGCAACTTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTGTAAAGTTCTCCACATaGGATGACGCTTGGGGAGCC | + |
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Preference number: 2 (lower is better) Translates to: LLGPMQLSLQRPALCQGSVKFST*DDAWGA Trigger: GGCTCCCCAAGCGTCATCTCATGTGGAGAACTTTAC...AGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAAGTTGCATGGGGCCTAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| 3UTR-3UTR CCA 90 bp | TTACTAGGCCCCATGCAACTTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTAGATGGGCATGTCCTTaGGACATCTCTTGGCACCAG | + |
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Preference number: 2 (lower is better) Translates to: LLGPMQLSLQRPALCQGSRWACP*DISWHQ Trigger: CTGGTGCCAAGAGATGTCCCAAGGACATGCCCATCT...AGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAAGTTGCATGGGGCCTAGTAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| 3UTR-3UTR CAA 90 bp | CCCTGGGAGCCCCCAGGGCCCGGTGACACGACAGGCTCACTGGCTTGGTGTTACTCCTTGGGACATCTCTaGGCACCAGCTATGTTAGGT | + |
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Preference number: 3 (lower is better) Translates to: PWEPPGPGDTTGSLAWCYSLGHL*APAMLG Trigger: ACCTAACATAGCTGGTGCCAAGAGATGTCCCAAGGA...GTAACACCAAGCCAGTGAGCCTGTCGTGTCACCGGGCCCTGGGGGCTCCCAGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| 3UTR CCA 72 bp | AGAGACCTGCTCTTTGTCAGGGGTCTGTCACTGGAGTaGACCCAGATGGGCATGTCCTTGGGACATCTCTTG | + |
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Preference number: 3 (lower is better) Translates to: RDLLFVRGLSLE*TQMGMSLGHLL Trigger: CAAGAGATGTCCCAAGGACATGCCCATCTGGGTCCACTCCAGTGACAGACCCCTGACAAAGAGCAGGTCTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| 3UTR-3UTR CAA 90 bp | GACAGGCTCACTGGCTTGGTGTTACTAGGCCCCATGCAACTTAGTCTCCAGAGACAGATGGGCATGTCCTaGGGACATCTCTTGGCACCA | + |
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Preference number: 3 (lower is better) Translates to: DRLTGLVLLGPMQLSLQRQMGMS*GHLLAP Trigger: TGGTGCCAAGAGATGTCCCAAGGACATGCCCATCTG...TCTCTGGAGACTAAGTTGCATGGGGCCTAGTAACACCAAGCCAGTGAGCCTGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR GCA 90 bp | GGCCCGGTGACACGACAGGCTCACTGGCTTGGTGTTACTAGGCCCCATGCAACTTGGAACTTTTCCAGTTaGTCGGGGCTTGCCAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: GPVTRQAHWLGVTRPHATWNFSS*SGLASV Trigger: GACGCTGGCAAGCCCCGAGCAACTGGAAAAGTTCCA...AGTTGCATGGGGCCTAGTAACACCAAGCCAGTGAGCCTGTCGTGTCACCGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR CCA 90 bp | GGCCCCATGCAACTTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTGTCACTTGGGGCTTCAGGTGCTaGCTCTTCAGGGCTCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: GPMQLSLQRPALCQGSVTWGFRC*LFRAQP Trigger: CGGCTGAGCCCTGAAGAGCCAGCACCTGAAGCCCCA...AGTGACAGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAAGTTGCATGGGGCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR CCA 90 bp | TGGACCCAGATGGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTAGGTTGGGGCTTCAGGTGCTaGCTCTTCAGGGCTCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: WTQMGMSLGHLLAPAMLGWGFRC*LFRAQP Trigger: CGGCTGAGCCCTGAAGAGCCAGCACCTGAAGCCCCA...ACCTAACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCCATCTGGGTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR GCA 90 bp | GGAGTGGACCCAGATGGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTTTCTGGGGCTTCAGGTaGTGGCTCTTCAGGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GVDPDGHVLGTSLGTSYVFWGFR*WLFRAQ Trigger: CTGAGCCCTGAAGAGCCAGCACCTGAAGCCCCAGAA...AACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCCATCTGGGTCCACTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR GCA 90 bp | CCATGCAACTTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTGTCACTGGAGGGTCGAGGCAGCAGTTaGAGCAGTCGAGGCCAACAG | + |
|
Preference number: 4 (lower is better) Translates to: PCNLVSRDLLFVRGLSLEGRGSS*SSRGQQ Trigger: CTGTTGGCCTCGACTGCTGCAACTGCTGCCTCGACC...CTCCAGTGACAGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAAGTTGCATGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS-3UTR GCA 90 bp | ACCCAGATGGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTAGGTGTAGCAGCTGCCGAAAGTTaGTCACGAAGGGGCTGCCCG | + |
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Preference number: 4 (lower is better) Translates to: TQMGMSLGHLLAPAMLGVAAAES*SRRGCP Trigger: CGGGCAGCCCCTTCGTGAGCAACTTTCGGCAGCTGC...TACACCTAACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCCATCTGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS-3UTR CCA 90 bp | TTACTAGGCCCCATGCAACTTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTCTAGGGCCACCACACTaGCTCCGGAGGCACTGTGGA | + |
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Preference number: 4 (lower is better) Translates to: LLGPMQLSLQRPALCQGSLGPPH*LRRHCG Trigger: TCCACAGTGCCTCCGGAGCCAGTGTGGTGGCCCTAG...AGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAAGTTGCATGGGGCCTAGTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS-3UTR GCA 90 bp | GACAGGCTCACTGGCTTGGTGTTACTAGGCCCCATGCAACTTAGTCTCCAGAGATTCTGGGGCTTCAGGTaGTGGCTCTTCAGGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: DRLTGLVLLGPMQLSLQRFWGFR*WLFRAQ Trigger: CTGAGCCCTGAAGAGCCAGCACCTGAAGCCCCAGAA...TCTCTGGAGACTAAGTTGCATGGGGCCTAGTAACACCAAGCCAGTGAGCCTGTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR CCA 90 bp | GGCCCGGTGACACGACAGGCTCACTGGCTTGGTGTTACTAGGCCCCATGCAACTTCTTCACGAGGTCCATaGCCTGCTCAATCTTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: GPVTRQAHWLGVTRPHATSSRGP*PAQSCC Trigger: ACAACAAGATTGAGCAGGCCATGGACCTCGTGAAGA...AGTTGCATGGGGCCTAGTAACACCAAGCCAGTGAGCCTGTCGTGTCACCGGGCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR CCA 90 bp | GGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTAGGTGTAAAGTTCTCTGGGGCTTCAGGTGCTaGCTCTTCAGGGCTCAGCCG | + |
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Preference number: 4 (lower is better) Translates to: GHVLGTSLGTSYVRCKVLWGFRC*LFRAQP Trigger: CGGCTGAGCCCTGAAGAGCCAGCACCTGAAGCCCCA...GAGAACTTTACACCTAACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR GCA 90 bp | GGCCCCATGCAACTTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTGTCACTAAGACGAGCTTCTCCTaGAGCTGCCGAAAGTTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GPMQLSLQRPALCQGSVTKTSFS*SCRKLL Trigger: GAGCAACTTTCGGCAGCTGCAGGAGAAGCTCGTCTT...AGTGACAGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAAGTTGCATGGGGCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS-3UTR CCA 90 bp | CCATGCAACTTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTGTCACTGGAGAGACCGCCACCTCCATaGGGGTCTGATACATTTCGG | + |
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Preference number: 4 (lower is better) Translates to: PCNLVSRDLLFVRGLSLERPPPP*GSDTFR Trigger: CCGAAATGTATCAGACCCCCATGGAGGTGGCGGTCT...CTCCAGTGACAGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAAGTTGCATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000055738.12 |
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| CDS-3UTR GCA 90 bp | GGCCCCATGCAACTTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTGTCACTACGAGGTCCATGGCCTaGTCAATCTTGTTGTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: GPMQLSLQRPALCQGSVTTRSMA*SILLSR Trigger: CCTAGACAACAAGATTGAGCAGGCCATGGACCTCGT...AGTGACAGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAAGTTGCATGGGGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR GCA 90 bp | GGAGTGGACCCAGATGGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTACGAGGTCCATGGCCTaGTCAATCTTGTTGTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: GVDPDGHVLGTSLGTSYVTRSMA*SILLSR Trigger: CCTAGACAACAAGATTGAGCAGGCCATGGACCTCGT...AACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCCATCTGGGTCCACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR GCA 90 bp | TTACTAGGCCCCATGCAACTTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTTGGAACTTTTCCAGTTaGTCGGGGCTTGCCAGCGTC | + |
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Preference number: 4 (lower is better) Translates to: LLGPMQLSLQRPALCQGSWNFSS*SGLASV Trigger: GACGCTGGCAAGCCCCGAGCAACTGGAAAAGTTCCA...AGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAAGTTGCATGGGGCCTAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR GCA 90 bp | GGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTAGGTGTAAAGTTCTCTTCTGGGGCTTCAGGTaGTGGCTCTTCAGGGCTCAG | + |
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Preference number: 4 (lower is better) Translates to: GHVLGTSLGTSYVRCKVLFWGFR*WLFRAQ Trigger: CTGAGCCCTGAAGAGCCAGCACCTGAAGCCCCAGAA...GAGAACTTTACACCTAACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR GCA 90 bp | GAGTGGACCCAGATGGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTATGGTCTGGTCTATGTTaGGGTTGCAGATGCCCTCAT | + |
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Preference number: 4 (lower is better) Translates to: EWTQMGMSLGHLLAPAMLWSGLC*GCRCPH Trigger: ATGAGGGCATCTGCAACCGCAACATAGACCAGACCA...TAACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCCATCTGGGTCCACTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS-3UTR CCA 90 bp | GAGTGGACCCAGATGGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTAGCTCCGGAGGCACTGTaGAAGAAAAGTAGAATGGAG | + |
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Preference number: 4 (lower is better) Translates to: EWTQMGMSLGHLLAPAMLAPEAL*KKSRME Trigger: CTCCATTCTACTTTTCTTCCACAGTGCCTCCGGAGC...TAACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCCATCTGGGTCCACTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS-3UTR GCA 90 bp | TTACTAGGCCCCATGCAACTTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTACGAGGTCCATGGCCTaGTCAATCTTGTTGTCTAGG | + |
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Preference number: 4 (lower is better) Translates to: LLGPMQLSLQRPALCQGSTRSMA*SILLSR Trigger: CCTAGACAACAAGATTGAGCAGGCCATGGACCTCGT...AGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAAGTTGCATGGGGCCTAGTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR GCA 90 bp | GGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTAGGTGTAAAGTTCTCAGCTTCTCCTGCAGCTaGCGAAAGTTGCTCACGAAG | + |
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Preference number: 4 (lower is better) Translates to: GHVLGTSLGTSYVRCKVLSFSCS*RKLLTK Trigger: CTTCGTGAGCAACTTTCGGCAGCTGCAGGAGAAGCT...GAGAACTTTACACCTAACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS-3UTR CCA 90 bp | GAGTGGACCCAGATGGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTATCTTCACGAGGTCCATaGCCTGCTCAATCTTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: EWTQMGMSLGHLLAPAMLSSRGP*PAQSCC Trigger: ACAACAAGATTGAGCAGGCCATGGACCTCGTGAAGA...TAACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCCATCTGGGTCCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| 3UTR CAA 72 bp | GAGTGGACCCAGATGGGCATGTCCTTGGGACATCTCTaGGCACCAGCTATGTTAGGTGTAAAGTTCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: EWTQMGMSLGHL*APAMLGVKFST Trigger: TGTGGAGAACTTTACACCTAACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCCATCTGGGTCCACTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR CCA 90 bp | GAAAGTGTTCACTGTCACAGAACCTCCTTACACAAGCTTCCTGGGTACATTTTCCTAGGGCCACCACACTaGCTCCGGAGGCACTGTTAT | + |
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Preference number: 4 (lower is better) Translates to: ESVHCHRTSLHKLPGYIFLGPPH*LRRHCY Trigger: ATAACAGTGCCTCCGGAGCCAGTGTGGTGGCCCTAG...GAAAATGTACCCAGGAAGCTTGTGTAAGGAGGTTCTGTGACAGTGAACACTTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000055738.12 |
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| CDS-3UTR CCA 90 bp | ACCCAGATGGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTAGGTGTATCTTCACGAGGTCCATaGCCTGCTCAATCTTGTTGT | + |
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Preference number: 4 (lower is better) Translates to: TQMGMSLGHLLAPAMLGVSSRGP*PAQSCC Trigger: ACAACAAGATTGAGCAGGCCATGGACCTCGTGAAGA...TACACCTAACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCCATCTGGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR CCA 90 bp | GGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTAGGTGTAAAGTTCTCATGGAGAGCATGGTCTaGTCTATGTTGCGGTTGCAG | + |
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Preference number: 4 (lower is better) Translates to: GHVLGTSLGTSYVRCKVLMESMV*SMLRLQ Trigger: CTGCAACCGCAACATAGACCAGACCATGCTCTCCAT...GAGAACTTTACACCTAACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS-3UTR CCA 90 bp | ATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTAGGTGTAAAGTTCTCCACAGTAGAATGGAGAGCATaGTCTGGTCTATGTTGCGGT | + |
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Preference number: 4 (lower is better) Translates to: MSLGHLLAPAMLGVKFSTVEWRA*SGLCCG Trigger: ACCGCAACATAGACCAGACCATGCTCTCCATTCTAC...TGTGGAGAACTTTACACCTAACATAGCTGGTGCCAAGAGATGTCCCAAGGACAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS CCA 90 bp | TGCCCGGGCTCTCCCCGCTCTTCTCCTTCTGGAGCTCGCAGCGGTTaGCCAGGTCGAGGCAGCAGTTGCAGCAGTCGAGGCCAACAGGTG | + |
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Preference number: 5 (lower is better) Translates to: CPGSPRSSPSGARSG*PGRGSSCSSRGQQV Trigger: CACCTGTTGGCCTCGACTGCTGCAACTGCTGCCTCGACCTGGCCAACCGCTGCGAGCTCCAGAAGGAGAAGAGCGGGGAGAGCCCGGGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS CCA 90 bp | TTGCTCACGAAGGGGCTGCCCGGGCTCTCCCCGCTCTTCTCCTTCTaGAGCTCGCAGCGGTTGGCCAGGTCGAGGCAGCAGTTGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: LLTKGLPGLSPLFSF*SSQRLARSRQQLQQ Trigger: CTGCTGCAACTGCTGCCTCGACCTGGCCAACCGCTGCGAGCTCCAGAAGGAGAAGAGCGGGGAGAGCCCGGGCAGCCCCTTCGTGAGCAA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS GCA 90 bp | TCTCCTTCTGGAGCTCGCAGCGGTTGGCCAGGTCGAGGCAGCAGTTaGAGCAGTCGAGGCCAACAGGTGAGCGGCACTCGGTCTTGGGCT | + |
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Preference number: 5 (lower is better) Translates to: SPSGARSGWPGRGSS*SSRGQQVSGTRSWA Trigger: AGCCCAAGACCGAGTGCCGCTCACCTGTTGGCCTCGACTGCTGCAACTGCTGCCTCGACCTGGCCAACCGCTGCGAGCTCCAGAAGGAGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS GCA 90 bp | AGACGAGCTTCTCCTGCAGCTGCCGAAAGTTGCTCACGAAGGGGCTaGCCGGGCTCTCCCCGCTCTTCTCCTTCTGGAGCTCGCAGCGGT | + |
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Preference number: 5 (lower is better) Translates to: RRASPAAAESCSRRG*PGSPRSSPSGARSG Trigger: ACCGCTGCGAGCTCCAGAAGGAGAAGAGCGGGGAGAGCCCGGGCAGCCCCTTCGTGAGCAACTTTCGGCAGCTGCAGGAGAAGCTCGTCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS GCA 90 bp | AGCTTGTCAGTGTTGAGGTTCTCGAAGACGAGCTTCTCCTGCAGCTaGCGAAAGTTGCTCACGAAGGGGCTGCCCGGGCTCTCCCCGCTC | + |
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Preference number: 5 (lower is better) Translates to: SLSVLRFSKTSFSCS*RKLLTKGLPGLSPL Trigger: GAGCGGGGAGAGCCCGGGCAGCCCCTTCGTGAGCAACTTTCGGCAGCTGCAGGAGAAGCTCGTCTTCGAGAACCTCAACACTGACAAGCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS-3UTR CAA 90 bp | TGGACCCAGATGGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTAGGTTGGAGCTCGCAGCGGTaGGCCAGGTCGAGGCAGCAG | + |
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Preference number: 5 (lower is better) Translates to: WTQMGMSLGHLLAPAMLGWSSQR*ARSRQQ Trigger: CTGCTGCCTCGACCTGGCCAACCGCTGCGAGCTCCA...ACCTAACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCCATCTGGGTCCA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS TCA 90 bp | TGGAGAGCATGGTCTGGTCTATGTTGCGGTTGCAGATGCCCTCATTaGTCAGGTAGCAGGGGTCGCGCACCACGGGCTCCATGGAATCCT | + |
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Preference number: 5 (lower is better) Translates to: WRAWSGLCCGCRCPH*SGSRGRAPRAPWNP Trigger: AGGATTCCATGGAGCCCGTGGTGCGCGACCCCTGCTACCTGATCAATGAGGGCATCTGCAACCGCAACATAGACCAGACCATGCTCTCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS GCA 90 bp | TTGTTCAGCTTGTCAGTGTTGAGGTTCTCGAAGACGAGCTTCTCCTaGAGCTGCCGAAAGTTGCTCACGAAGGGGCTGCCCGGGCTCTCC | + |
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Preference number: 5 (lower is better) Translates to: LFSLSVLRFSKTSFS*SCRKLLTKGLPGLS Trigger: GGAGAGCCCGGGCAGCCCCTTCGTGAGCAACTTTCGGCAGCTGCAGGAGAAGCTCGTCTTCGAGAACCTCAACACTGACAAGCTGAACAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS-3UTR CAA 90 bp | GGCCCCATGCAACTTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTGTCACTCTGGAACTTTTCCAGTaGCTCGGGGCTTGCCAGCGT | + |
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Preference number: 5 (lower is better) Translates to: GPMQLSLQRPALCQGSVTLELFQ*LGACQR Trigger: ACGCTGGCAAGCCCCGAGCAACTGGAAAAGTTCCAG...AGTGACAGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAAGTTGCATGGGGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR CAA 90 bp | CCATGCAACTTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTGTCACTGGAGCTGGAACTTTTCCAGTaGCTCGGGGCTTGCCAGCGT | + |
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Preference number: 5 (lower is better) Translates to: PCNLVSRDLLFVRGLSLELELFQ*LGACQR Trigger: ACGCTGGCAAGCCCCGAGCAACTGGAAAAGTTCCAG...CTCCAGTGACAGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAAGTTGCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR CAA 90 bp | GGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTAGGTGTAAAGTTCTCTGCAGCTGCCGAAAGTaGCTCACGAAGGGGCTGCCC | + |
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Preference number: 5 (lower is better) Translates to: GHVLGTSLGTSYVRCKVLCSCRK*LTKGLP Trigger: GGGCAGCCCCTTCGTGAGCAACTTTCGGCAGCTGCA...GAGAACTTTACACCTAACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS-3UTR CAA 90 bp | CCATGCAACTTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTGTCACTGGAGCTGGCTCCGGAGGCATaGTCCCCTTTTCTGAAGAGG | + |
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Preference number: 5 (lower is better) Translates to: PCNLVSRDLLFVRGLSLELAPEA*SPFLKR Trigger: CCTCTTCAGAAAAGGGGACAATGCCTCCGGAGCCAG...CTCCAGTGACAGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAAGTTGCATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000123898.2 |
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| CDS-3UTR CAA 90 bp | TTACTAGGCCCCATGCAACTTAGTCTCCAGAGACCTGCTCTTTGTCAGGGGTCTGCCTGCTCAATCTTGTaGTCTAGGGCCACCACACTG | + |
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Preference number: 5 (lower is better) Translates to: LLGPMQLSLQRPALCQGSACSIL*SRATTL Trigger: CAGTGTGGTGGCCCTAGACAACAAGATTGAGCAGGC...AGACCCCTGACAAAGAGCAGGTCTCTGGAGACTAAGTTGCATGGGGCCTAGTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS-3UTR CAA 90 bp | GGAGTGGACCCAGATGGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTTGGTCTATGTTGCGGTaGCAGATGCCCTCATTGATC | + |
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Preference number: 5 (lower is better) Translates to: GVDPDGHVLGTSLGTSYVWSMLR*QMPSLI Trigger: GATCAATGAGGGCATCTGCAACCGCAACATAGACCA...AACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCCATCTGGGTCCACTCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS TCA 90 bp | GCTCCATGGAATCCTGGCGCATTATGTTGTTCAGCTTGTCAGTGTTaGGGTTCTCGAAGACGAGCTTCTCCTGCAGCTGCCGAAAGTTGC | + |
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Preference number: 5 (lower is better) Translates to: APWNPGALCCSACQC*GSRRRASPAAAESC Trigger: GCAACTTTCGGCAGCTGCAGGAGAAGCTCGTCTTCGAGAACCTCAACACTGACAAGCTGAACAACATAATGCGCCAGGATTCCATGGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS-3UTR CAA 90 bp | ACCCAGATGGGCATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTAGGTGTAATGGTCTGGTCTATGTaGCGGTTGCAGATGCCCTCA | + |
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Preference number: 5 (lower is better) Translates to: TQMGMSLGHLLAPAMLGVMVWSM*RLQMPS Trigger: TGAGGGCATCTGCAACCGCAACATAGACCAGACCAT...TACACCTAACATAGCTGGTGCCAAGAGATGTCCCAAGGACATGCCCATCTGGGT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS-3UTR CAA 90 bp | ATGTCCTTGGGACATCTCTTGGCACCAGCTATGTTAGGTGTAAAGTTCTCCACAGCCTGCTCAATCTTGTaGTCTAGGGCCACCACACTG | + |
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Preference number: 5 (lower is better) Translates to: MSLGHLLAPAMLGVKFSTACSIL*SRATTL Trigger: CAGTGTGGTGGCCCTAGACAACAAGATTGAGCAGGC...TGTGGAGAACTTTACACCTAACATAGCTGGTGCCAAGAGATGTCCCAAGGACAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS CCA 72 bp | AAGGGGCTGCCCGGGCTCTCCCCGCTCTTCTCCTTCTaGAGCTCGCAGCGGTTGGCCAGGTCGAGGCAGCAG | + |
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Preference number: 6 (lower is better) Translates to: KGLPGLSPLFSF*SSQRLARSRQQ Trigger: CTGCTGCCTCGACCTGGCCAACCGCTGCGAGCTCCAGAAGGAGAAGAGCGGGGAGAGCCCGGGCAGCCCCTT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS GCA 72 bp | GGAGCTCGCAGCGGTTGGCCAGGTCGAGGCAGCAGTTaGAGCAGTCGAGGCCAACAGGTGAGCGGCACTCGG | + |
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Preference number: 6 (lower is better) Translates to: GARSGWPGRGSS*SSRGQQVSGTR Trigger: CCGAGTGCCGCTCACCTGTTGGCCTCGACTGCTGCAACTGCTGCCTCGACCTGGCCAACCGCTGCGAGCTCC 68% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS CAA 90 bp | CTGCCCGGGCTCTCCCCGCTCTTCTCCTTCTGGAGCTCGCAGCGGTaGGCCAGGTCGAGGCAGCAGTTGCAGCAGTCGAGGCCAACAGGT | + |
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Preference number: 6 (lower is better) Translates to: LPGLSPLFSFWSSQR*ARSRQQLQQSRPTG Trigger: ACCTGTTGGCCTCGACTGCTGCAACTGCTGCCTCGACCTGGCCAACCGCTGCGAGCTCCAGAAGGAGAAGAGCGGGGAGAGCCCGGGCAG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS GCA 72 bp | TCTCCTGCAGCTGCCGAAAGTTGCTCACGAAGGGGCTaGCCGGGCTCTCCCCGCTCTTCTCCTTCTGGAGCT | + |
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Preference number: 6 (lower is better) Translates to: SPAAAESCSRRG*PGSPRSSPSGA Trigger: AGCTCCAGAAGGAGAAGAGCGGGGAGAGCCCGGGCAGCCCCTTCGTGAGCAACTTTCGGCAGCTGCAGGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS GCA 72 bp | TCTCGAAGACGAGCTTCTCCTGCAGCTGCCGAAAGTTaGTCACGAAGGGGCTGCCCGGGCTCTCCCCGCTCT | + |
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Preference number: 6 (lower is better) Translates to: SRRRASPAAAES*SRRGCPGSPRS Trigger: AGAGCGGGGAGAGCCCGGGCAGCCCCTTCGTGAGCAACTTTCGGCAGCTGCAGGAGAAGCTCGTCTTCGAGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS CAA 72 bp | TTCTCGAAGACGAGCTTCTCCTGCAGCTGCCGAAAGTaGCTCACGAAGGGGCTGCCCGGGCTCTCCCCGCTC | + |
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Preference number: 6 (lower is better) Translates to: FSKTSFSCSCRK*LTKGLPGLSPL Trigger: GAGCGGGGAGAGCCCGGGCAGCCCCTTCGTGAGCAACTTTCGGCAGCTGCAGGAGAAGCTCGTCTTCGAGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS CAA 90 bp | GTGTTGAGGTTCTCGAAGACGAGCTTCTCCTGCAGCTGCCGAAAGTaGCTCACGAAGGGGCTGCCCGGGCTCTCCCCGCTCTTCTCCTTC | + |
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Preference number: 6 (lower is better) Translates to: VLRFSKTSFSCSCRK*LTKGLPGLSPLFSF Trigger: GAAGGAGAAGAGCGGGGAGAGCCCGGGCAGCCCCTTCGTGAGCAACTTTCGGCAGCTGCAGGAGAAGCTCGTCTTCGAGAACCTCAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS GCA 72 bp | GTGTTGAGGTTCTCGAAGACGAGCTTCTCCTGCAGCTaGCGAAAGTTGCTCACGAAGGGGCTGCCCGGGCTC | + |
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Preference number: 6 (lower is better) Translates to: VLRFSKTSFSCS*RKLLTKGLPGL Trigger: GAGCCCGGGCAGCCCCTTCGTGAGCAACTTTCGGCAGCTGCAGGAGAAGCTCGTCTTCGAGAACCTCAACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS TCA 72 bp | TGGTCTGGTCTATGTTGCGGTTGCAGATGCCCTCATTaGTCAGGTAGCAGGGGTCGCGCACCACGGGCTCCA | + |
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Preference number: 6 (lower is better) Translates to: WSGLCCGCRCPH*SGSRGRAPRAP Trigger: TGGAGCCCGTGGTGCGCGACCCCTGCTACCTGATCAATGAGGGCATCTGCAACCGCAACATAGACCAGACCA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS CAA 90 bp | GCGTACATCAGGTGGTTCTTCACGAGGTCCATGGCCTGCTCAATCTaGTTGTCTAGGGCCACCACACTGGCTCCGGAGGCACTGTGGAAG | + |
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Preference number: 6 (lower is better) Translates to: AYIRWFFTRSMACSI*LSRATTLAPEALWK Trigger: CTTCCACAGTGCCTCCGGAGCCAGTGTGGTGGCCCTAGACAACAAGATTGAGCAGGCCATGGACCTCGTGAAGAACCACCTGATGTACGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS CAA 72 bp | TGGTTCTTCACGAGGTCCATGGCCTGCTCAATCTTGTaGTCTAGGGCCACCACACTGGCTCCGGAGGCACTG | + |
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Preference number: 6 (lower is better) Translates to: WFFTRSMACSIL*SRATTLAPEAL Trigger: CAGTGCCTCCGGAGCCAGTGTGGTGGCCCTAGACAACAAGATTGAGCAGGCCATGGACCTCGTGAAGAACCA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 |
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| CDS CAA 72 bp | AGGTGGTTCTTCACGAGGTCCATGGCCTGCTCAATCTaGTTGTCTAGGGCCACCACACTGGCTCCGGAGGCA | + |
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Preference number: 6 (lower is better) Translates to: RWFFTRSMACSI*LSRATTLAPEA Trigger: TGCCTCCGGAGCCAGTGTGGTGGCCCTAGACAACAAGATTGAGCAGGCCATGGACCTCGTGAAGAACCACCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000055738.12 ENSMUST00000112996.9 ENSMUST00000123898.2 |
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| CDS CAA 90 bp | GCGTACATCAGGTGGTTCTTCACGAGGTCCATGGCCTGCTCAATCTaGTTGTCTAGGGCCACCACACTGGCTCCGGAGGCACTGTTATCC | + |
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Preference number: 6 (lower is better) Translates to: AYIRWFFTRSMACSI*LSRATTLAPEALLS Trigger: GGATAACAGTGCCTCCGGAGCCAGTGTGGTGGCCCTAGACAACAAGATTGAGCAGGCCATGGACCTCGTGAAGAACCACCTGATGTACGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055738.12 |
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| CDS CAA 90 bp | CAGGGGTCGCGCACCACGGGCTCCATGGAATCCTGGCGCATTATGTaGTTCAGCTTGTCAGTGTTGAGGTTCTCGAAGACGAGCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: QGSRTTGSMESWRIM*FSLSVLRFSKTSFS Trigger: GGAGAAGCTCGTCTTCGAGAACCTCAACACTGACAAGCTGAACAACATAATGCGCCAGGATTCCATGGAGCCCGTGGTGCGCGACCCCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS GCA 72 bp | TTGTCAGTGTTGAGGTTCTCGAAGACGAGCTTCTCCTaGAGCTGCCGAAAGTTGCTCACGAAGGGGCTGCCC | + |
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Preference number: 6 (lower is better) Translates to: LSVLRFSKTSFS*SCRKLLTKGLP Trigger: GGGCAGCCCCTTCGTGAGCAACTTTCGGCAGCTGCAGGAGAAGCTCGTCTTCGAGAACCTCAACACTGACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS CAA 72 bp | TGGTTCTTCACGAGGTCCATGGCCTGCTCAATCTTGTaGTCTAGGGCCACCACACTGGCTCCGGAGGCATTG | + |
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Preference number: 6 (lower is better) Translates to: WFFTRSMACSIL*SRATTLAPEAL Trigger: CAATGCCTCCGGAGCCAGTGTGGTGGCCCTAGACAACAAGATTGAGCAGGCCATGGACCTCGTGAAGAACCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000123898.2 |
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| CDS CAA 90 bp | CGCACCACGGGCTCCATGGAATCCTGGCGCATTATGTTGTTCAGCTaGTCAGTGTTGAGGTTCTCGAAGACGAGCTTCTCCTGCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: RTTGSMESWRIMLFS*SVLRFSKTSFSCSC Trigger: GCAGCTGCAGGAGAAGCTCGTCTTCGAGAACCTCAACACTGACAAGCTGAACAACATAATGCGCCAGGATTCCATGGAGCCCGTGGTGCG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS CAA 90 bp | TACATCAGGTGGTTCTTCACGAGGTCCATGGCCTGCTCAATCTTGTaGTCTAGGGCCACCACACTGGCTCCGGAGGCACTGTTATCCAGT | + |
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Preference number: 6 (lower is better) Translates to: YIRWFFTRSMACSIL*SRATTLAPEALLSS Trigger: ACTGGATAACAGTGCCTCCGGAGCCAGTGTGGTGGCCCTAGACAACAAGATTGAGCAGGCCATGGACCTCGTGAAGAACCACCTGATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000055738.12 |
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| CDS CAA 90 bp | TACATCAGGTGGTTCTTCACGAGGTCCATGGCCTGCTCAATCTTGTaGTCTAGGGCCACCACACTGGCTCCGGAGGCACTGTGGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: YIRWFFTRSMACSIL*SRATTLAPEALWKK Trigger: TTTCTTCCACAGTGCCTCCGGAGCCAGTGTGGTGGCCCTAGACAACAAGATTGAGCAGGCCATGGACCTCGTGAAGAACCACCTGATGTA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS CAA 72 bp | CGCACCACGGGCTCCATGGAATCCTGGCGCATTATGTaGTTCAGCTTGTCAGTGTTGAGGTTCTCGAAGACG | + |
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Preference number: 6 (lower is better) Translates to: RTTGSMESWRIM*FSLSVLRFSKT Trigger: CGTCTTCGAGAACCTCAACACTGACAAGCTGAACAACATAATGCGCCAGGATTCCATGGAGCCCGTGGTGCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS CAA 90 bp | GGCTCCATGGAATCCTGGCGCATTATGTTGTTCAGCTTGTCAGTGTaGAGGTTCTCGAAGACGAGCTTCTCCTGCAGCTGCCGAAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: GSMESWRIMLFSLSV*RFSKTSFSCSCRKL Trigger: CAACTTTCGGCAGCTGCAGGAGAAGCTCGTCTTCGAGAACCTCAACACTGACAAGCTGAACAACATAATGCGCCAGGATTCCATGGAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS TCA 72 bp | AATCCTGGCGCATTATGTTGTTCAGCTTGTCAGTGTTaGGGTTCTCGAAGACGAGCTTCTCCTGCAGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: NPGALCCSACQC*GSRRRASPAAA Trigger: GGCAGCTGCAGGAGAAGCTCGTCTTCGAGAACCTCAACACTGACAAGCTGAACAACATAATGCGCCAGGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS CAA 72 bp | GAATCCTGGCGCATTATGTTGTTCAGCTTGTCAGTGTaGAGGTTCTCGAAGACGAGCTTCTCCTGCAGCTGC | + |
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Preference number: 6 (lower is better) Translates to: ESWRIMLFSLSV*RFSKTSFSCSC Trigger: GCAGCTGCAGGAGAAGCTCGTCTTCGAGAACCTCAACACTGACAAGCTGAACAACATAATGCGCCAGGATTC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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| CDS CAA 72 bp | GGCTCCATGGAATCCTGGCGCATTATGTTGTTCAGCTaGTCAGTGTTGAGGTTCTCGAAGACGAGCTTCTCC | + |
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Preference number: 6 (lower is better) Translates to: GSMESWRIMLFS*SVLRFSKTSFS Trigger: GGAGAAGCTCGTCTTCGAGAACCTCAACACTGACAAGCTGAACAACATAATGCGCCAGGATTCCATGGAGCC 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000112996.9 |
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