RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSC22D2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000027806

Ensembl transcript IDs: ENSMUST00000099090.7, ENSMUST00000196049.2, ENSMUST00000199164.2

Found 370 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CGGCTGCTGTGGAGGTTGCGTTGGCTGAGGAGGCTGTGCTATCATTaGTTGTTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGCTGG +
Preference number: 1 (lower is better)
Translates to: RLLWRLRWLRRLCYH*LLLRSATRIGLLGW
Trigger: CCAGCCCAACAGGCCAATCCTGGTAGCACTTCTCAACAACAAGCAATGATAGCACAGCCTCCTCAGCCAACGCAACCTCCACAGCAGCCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
3UTR GCA 90 bp TTCTCCTCGTGTACTGATGACACACAAGTGGACCGACAGCCACAGTaGTGCATGACATCTGAGAGGGAAGCTCCTGTAGAACGATTGTCT +
Preference number: 1 (lower is better)
Translates to: FSSCTDDTQVDRQPQ*CMTSEREAPVERLS
Trigger: AGACAATCGTTCTACAGGAGCTTCCCTCTCAGATGTCATGCAGCACTGTGGCTGTCGGTCCACTTGTGTGTCATCAGTACACGAGGAGAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR GCA 90 bp TCCTCGTGTACTGATGACACACAAGTGGACCGACAGCCACAGTGCTaGATGACATCTGAGAGGGAAGCTCCTGTAGAACGATTGTCTAAT +
Preference number: 1 (lower is better)
Translates to: SSCTDDTQVDRQPQC*MTSEREAPVERLSN
Trigger: ATTAGACAATCGTTCTACAGGAGCTTCCCTCTCAGATGTCATGCAGCACTGTGGCTGTCGGTCCACTTGTGTGTCATCAGTACACGAGGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CCA 90 bp GTACTTCACCTTCTACTTTCACATTGGATGCTGAGATCCTGGGGTTaGAGAGGGGGCAAAGATCATGTCCTAAACAGCTTTCGCTCCTCA +
Preference number: 1 (lower is better)
Translates to: VLHLLLSHWMLRSWG*RGGKDHVLNSFRSS
Trigger: TGAGGAGCGAAAGCTGTTTAGGACATGATCTTTGCCCCCTCTCCAACCCCAGGATCTCAGCATCCAATGTGAAAGTAGAAGGTGAAGTAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR TCA 90 bp ATTGCTTTCAGTTTTTCCTTAACGAGGCTTAAGAAAGCTTTATGCTaGGGAGACATTCGGCTGCTGTGGAGGTTGCGTTGGCTGAGGAGG +
Preference number: 1 (lower is better)
Translates to: IAFSFSLTRLKKALC*GDIRLLWRLRWLRR
Trigger: CCTCCTCAGCCAACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTTAAGCCTCGTTAAGGAAAAACTGAAAGCAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
3UTR CCA 90 bp ACCTGGCTCACCTCTGTTCCTGACTCTGGAGTTCAGTGTGCCTCGTaGAAATGGGGAACAGATTTGGATGGAAACTTCATTACACAACTT +
Preference number: 1 (lower is better)
Translates to: TWLTSVPDSGVQCAS*KWGTDLDGNFITQL
Trigger: AAGTTGTGTAATGAAGTTTCCATCCAAATCTGTTCCCCATTTCCACGAGGCACACTGAACTCCAGAGTCAGGAACAGAGGTGAGCCAGGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CCA 90 bp AACATGGTACTTCACCTTCTACTTTCACATTGGATGCTGAGATCCTaGGGTTGGAGAGGGGGCAAAGATCATGTCCTAAACAGCTTTCGC +
Preference number: 1 (lower is better)
Translates to: NMVLHLLLSHWMLRS*GWRGGKDHVLNSFR
Trigger: GCGAAAGCTGTTTAGGACATGATCTTTGCCCCCTCTCCAACCCCAGGATCTCAGCATCCAATGTGAAAGTAGAAGGTGAAGTACCATGTT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CCA 90 bp AGGCCAAGCACACAGCCGAAGCATGGCTACTTGCTTTCTATAAAGTaGAAAGAACACCAGTGGCACACAAGGAAAGATTGCTTTCAGTTT +
Preference number: 1 (lower is better)
Translates to: RPSTQPKHGYLLSIK*KEHQWHTRKDCFQF
Trigger: AAACTGAAAGCAATCTTTCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATAGAAAGCAAGTAGCCATGCTTCGGCTGTGTGCTTGGCCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CCA 90 bp GAACGATTGTCTAATACTGAAAAGGCCAAGCACACAGCCGAAGCATaGCTACTTGCTTTCTATAAAGTGGAAAGAACACCAGTGGCACAC +
Preference number: 1 (lower is better)
Translates to: ERLSNTEKAKHTAEA*LLAFYKVERTPVAH
Trigger: GTGTGCCACTGGTGTTCTTTCCACTTTATAGAAAGCAAGTAGCCATGCTTCGGCTGTGTGCTTGGCCTTTTCAGTATTAGACAATCGTTC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CCA 90 bp AAACTGGAGTCAGAATCCATACTATCTCTTCAGGAAGCAAGAGGCTaGAAAGGTTTGGAATTATGGTGGCCAGTCACCTGGAGGAAGATT +
Preference number: 1 (lower is better)
Translates to: KLESESILSLQEARG*KGLELWWPVTWRKI
Trigger: AATCTTCCTCCAGGTGACTGGCCACCATAATTCCAAACCTTTCCAGCCTCTTGCTTCCTGAAGAGATAGTATGGATTCTGACTCCAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CCA 90 bp TTATTGTGGATAAGCAACATGGTACTTCACCTTCTACTTTCACATTaGATGCTGAGATCCTGGGGTTGGAGAGGGGGCAAAGATCATGTC +
Preference number: 1 (lower is better)
Translates to: LLWISNMVLHLLLSH*MLRSWGWRGGKDHV
Trigger: GACATGATCTTTGCCCCCTCTCCAACCCCAGGATCTCAGCATCCAATGTGAAAGTAGAAGGTGAAGTACCATGTTGCTTATCCACAATAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR TCA 90 bp GAAGTGCTACCAGGATTGGCCTGTTGGGCTGGGAGTTGGGACAACTaGTCATTGTTTGAAAGAGATTTTAACAGTGCATTTTCTCGTTCA +
Preference number: 1 (lower is better)
Translates to: EVLPGLACWAGSWDN*SLFERDFNSAFSRS
Trigger: TGAACGAGAAAATGCACTGTTAAAATCTCTTTCAAACAATGATCAGTTGTCCCAACTCCCAGCCCAACAGGCCAATCCTGGTAGCACTTC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
3UTR TCA 90 bp CTGGGGACTGGCCTTTCACCTTTCAACAGAATCACTGAAGAGAAATaGAACACATCCATCATAAAGGACATGTCATCAAGGCTTAATAGC +
Preference number: 1 (lower is better)
Translates to: LGTGLSPFNRITEEK*NTSIIKDMSSRLNS
Trigger: GCTATTAAGCCTTGATGACATGTCCTTTATGATGGATGTGTTTCATTTCTCTTCAGTGATTCTGTTGAAAGGTGAAAGGCCAGTCCCCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR TCA 90 bp ATTGTGAATCCTGGGGACTGGCCTTTCACCTTTCAACAGAATCACTaGAGAGAAATGAAACACATCCATCATAAAGGACATGTCATCAAG +
Preference number: 1 (lower is better)
Translates to: IVNPGDWPFTFQQNH*REMKHIHHKGHVIK
Trigger: CTTGATGACATGTCCTTTATGATGGATGTGTTTCATTTCTCTTCAGTGATTCTGTTGAAAGGTGAAAGGCCAGTCCCCAGGATTCACAAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CCA 90 bp GCTAGAATTAGACACTGGCCTAGTATTTATTATATACGCCAAGTGTaGGAGAGGTTTCCTTGTCTGCAGTCTTCTTTGGGTTTATCTATC +
Preference number: 1 (lower is better)
Translates to: ARIRHWPSIYYIRQV*ERFPCLQSSLGLSI
Trigger: GATAGATAAACCCAAAGAAGACTGCAGACAAGGAAACCTCTCCCACACTTGGCGTATATAATAAATACTAGGCCAGTGTCTAATTCTAGC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR TCA 90 bp TTCACATCCTATCTTGCCCATAGTGGCTCTACTAGAATCTCACTCTaGATCCTTAGGGTTATTACATATTCAAGTCTACATACTTACCTA +
Preference number: 1 (lower is better)
Translates to: FTSYLAHSGSTRISL*ILRVITYSSLHTYL
Trigger: TAGGTAAGTATGTAGACTTGAATATGTAATAACCCTAAGGATTCAGAGTGAGATTCTAGTAGAGCCACTATGGGCAAGATAGGATGTGAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR TCA 90 bp TTTCTAAACTGTCTCCAGTTTTTACCCACCACTCTACCAAAGAACTaGATTGAGATTCTCCCACTATCATCCAATGAATCATTCTTGTTA +
Preference number: 1 (lower is better)
Translates to: FLNCLQFLPTTLPKN*IEILPLSSNESFLL
Trigger: TAACAAGAATGATTCATTGGATGATAGTGGGAGAATCTCAATTCAGTTCTTTGGTAGAGTGGTGGGTAAAAACTGGAGACAGTTTAGAAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR TCA 90 bp CTGCAGTCTTCTTTGGGTTTATCTATCAATATACTAATTGCAAGATaGCAGAAACTATCATCTGGAAGACATTTTGAATTGCAGTGGGCA +
Preference number: 1 (lower is better)
Translates to: LQSSLGLSINILIAR*QKLSSGRHFELQWA
Trigger: TGCCCACTGCAATTCAAAATGTCTTCCAGATGATAGTTTCTGTCATCTTGCAATTAGTATATTGATAGATAAACCCAAAGAAGACTGCAG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CAA 90 bp CTGCTGTGGAGGTTGCGTTGGCTGAGGAGGCTGTGCTATCATTGCTaGTTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGCTGGGAG +
Preference number: 2 (lower is better)
Translates to: LLWRLRWLRRLCYHC*LLRSATRIGLLGWE
Trigger: CTCCCAGCCCAACAGGCCAATCCTGGTAGCACTTCTCAACAACAAGCAATGATAGCACAGCCTCCTCAGCCAACGCAACCTCCACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
3UTR CAA 90 bp TCGGCTGCTGTGGAGGTTGCGTTGGCTGAGGAGGCTGTGCTATCATaGCTTGTTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGCTG +
Preference number: 2 (lower is better)
Translates to: SAAVEVALAEEAVLS*LVVEKCYQDWPVGL
Trigger: CAGCCCAACAGGCCAATCCTGGTAGCACTTCTCAACAACAAGCAATGATAGCACAGCCTCCTCAGCCAACGCAACCTCCACAGCAGCCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
3UTR CAA 90 bp TGGAGGTTGCGTTGGCTGAGGAGGCTGTGCTATCATTGCTTGTTGTaGAGAAGTGCTACCAGGATTGGCCTGTTGGGCTGGGAGTTGGGA +
Preference number: 2 (lower is better)
Translates to: WRLRWLRRLCYHCLL*RSATRIGLLGWELG
Trigger: TCCCAACTCCCAGCCCAACAGGCCAATCCTGGTAGCACTTCTCAACAACAAGCAATGATAGCACAGCCTCCTCAGCCAACGCAACCTCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
3UTR CAA 90 bp CTGTGGAGGTTGCGTTGGCTGAGGAGGCTGTGCTATCATTGCTTGTaGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGCTGGGAGTTG +
Preference number: 2 (lower is better)
Translates to: LWRLRWLRRLCYHCL*LRSATRIGLLGWEL
Trigger: CAACTCCCAGCCCAACAGGCCAATCCTGGTAGCACTTCTCAACAACAAGCAATGATAGCACAGCCTCCTCAGCCAACGCAACCTCCACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
3UTR-3UTR CCA 90 bp GGCTTAAGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTCCAGGATTGGCCTGTTaGGCTGGGAGTTGGGACAAC +
Preference number: 2 (lower is better)
Translates to: GLRKLYAEETFGCCGGCVPGLAC*AGSWDN
Trigger: GTTGTCCCAACTCCCAGCCCAACAGGCCAATCCTGG...AACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTTAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
3UTR CAA 90 bp CCACAGTGCTGCATGACATCTGAGAGGGAAGCTCCTGTAGAACGATaGTCTAATACTGAAAAGGCCAAGCACACAGCCGAAGCATGGCTA +
Preference number: 2 (lower is better)
Translates to: PQCCMTSEREAPVER*SNTEKAKHTAEAWL
Trigger: TAGCCATGCTTCGGCTGTGTGCTTGGCCTTTTCAGTATTAGACAATCGTTCTACAGGAGCTTCCCTCTCAGATGTCATGCAGCACTGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CAA 90 bp GGTACTTCACCTTCTACTTTCACATTGGATGCTGAGATCCTGGGGTaGGAGAGGGGGCAAAGATCATGTCCTAAACAGCTTTCGCTCCTC +
Preference number: 2 (lower is better)
Translates to: GTSPSTFTLDAEILG*ERGQRSCPKQLSLL
Trigger: GAGGAGCGAAAGCTGTTTAGGACATGATCTTTGCCCCCTCTCCAACCCCAGGATCTCAGCATCCAATGTGAAAGTAGAAGGTGAAGTACC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR TCA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCAGCCACAGTGCTGCATaGCATCTGAGAGGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLSHSAA*HLRGKL
Trigger: GAGCTTCCCTCTCAGATGTCATGCAGCACTGTGGCT...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR CCA 90 bp GGCTTAAGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTCTATTTTGTTGTCAATaGCTACAACACCGCCCCCAG +
Preference number: 2 (lower is better)
Translates to: GLRKLYAEETFGCCGGCVLFCCQ*LQHRPQ
Trigger: CTGGGGGCGGTGTTGTAGCCATTGACAACAAAATAG...AACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTTAAGCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
3UTR-3UTR TCA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCGTGCTGCATGACATCTaGGAGGGAAGCTCCTGTAGA +
Preference number: 2 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLVLHDI*EGSSCR
Trigger: TCTACAGGAGCTTCCCTCTCAGATGTCATGCAGCAC...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR GCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTCGACAGCCACAGTGCTaGATGACATCTGAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTRQPQC*MTSERE
Trigger: TTCCCTCTCAGATGTCATGCAGCACTGTGGCTGTCG...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR GCA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCCGACAGCCACAGTGCTaGATGACATCTGAGAGGGAA +
Preference number: 2 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLRQPQC*MTSERE
Trigger: TTCCCTCTCAGATGTCATGCAGCACTGTGGCTGTCG...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR TCA 90 bp CTATCATTGCTTGTTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGCTGGGACAGATGCACAATTTATaGCCTGATGAGACACTCTTG +
Preference number: 2 (lower is better)
Translates to: LSLLVVEKCYQDWPVGLGQMHNL*PDETLL
Trigger: CAAGAGTGTCTCATCAGGTCATAAATTGTGCATCTG...TCCCAGCCCAACAGGCCAATCCTGGTAGCACTTCTCAACAACAAGCAATGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
3UTR-3UTR CCA 90 bp AACGTGACAGGAAGGCTCAAGGTACATCCATGGGTGGTAAGAAACATGGGAGAGCACACAGCCGAAGCATaGCTACTTGCTTTCTATAAA +
Preference number: 2 (lower is better)
Translates to: NVTGRLKVHPWVVRNMGEHTAEA*LLAFYK
Trigger: TTTATAGAAAGCAAGTAGCCATGCTTCGGCTGTGTG...CTCTCCCATGTTTCTTACCACCCATGGATGTACCTTGAGCCTTCCTGTCACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CAA 90 bp CTTATTGTGGATAAGCAACATGGTACTTCACCTTCTACTTTCACATaGGATGCTGAGATCCTGGGGTTGGAGAGGGGGCAAAGATCATGT +
Preference number: 2 (lower is better)
Translates to: LIVDKQHGTSPSTFT*DAEILGLERGQRSC
Trigger: ACATGATCTTTGCCCCCTCTCCAACCCCAGGATCTCAGCATCCAATGTGAAAGTAGAAGGTGAAGTACCATGTTGCTTATCCACAATAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR TCA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAAGTGCTGCATGACATCTaGGAGGGAAGCTCCTGTAGA +
Preference number: 2 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQVLHDI*EGSSCR
Trigger: TCTACAGGAGCTTCCCTCTCAGATGTCATGCAGCAC...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR GCA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTTGGGCACATGTAGAATaGAGACTCTCCTTGCTTTAC +
Preference number: 2 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFWAHVE*RLSLLY
Trigger: GTAAAGCAAGGAGAGTCTGCATTCTACATGTGCCCA...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR CCA 90 bp CTTACCACTTACCTAGCATACAGCCTTGTATTTATCTCAGAGTTCTCAGTCCTACTGATGACACACAAGTaGACCGACAGCCACAGTGCT +
Preference number: 2 (lower is better)
Translates to: LTTYLAYSLVFISEFSVLLMTHK*TDSHSA
Trigger: AGCACTGTGGCTGTCGGTCCACTTGTGTGTCATCAG...TAGGACTGAGAACTCTGAGATAAATACAAGGCTGTATGCTAGGTAAGTGGTAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CCA 90 bp CTTACCACTTACCTAGCATACAGCCTTGTATTTATCTCAGAGTTCTCAGTCCTACTGAGATCCTGGGGTTaGAGAGGGGGCAAAGATCAT +
Preference number: 2 (lower is better)
Translates to: LTTYLAYSLVFISEFSVLLRSWG*RGGKDH
Trigger: ATGATCTTTGCCCCCTCTCCAACCCCAGGATCTCAG...TAGGACTGAGAACTCTGAGATAAATACAAGGCTGTATGCTAGGTAAGTGGTAAG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CAA 90 bp TGTCTAATACTGAAAAGGCCAAGCACACAGCCGAAGCATGGCTACTaGCTTTCTATAAAGTGGAAAGAACACCAGTGGCACACAAGGAAA +
Preference number: 2 (lower is better)
Translates to: CLILKRPSTQPKHGY*LSIKWKEHQWHTRK
Trigger: TTTCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATAGAAAGCAAGTAGCCATGCTTCGGCTGTGTGCTTGGCCTTTTCAGTATTAGACA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR CCA 90 bp TTCAGGAAGCAAGAGGCTGGAAAGGTTTGGAATTATGGTGGCCAGTCACCTGGAACAGCTTTGCTTCTTTaGTTACAAAGTAGGTTGAAC +
Preference number: 2 (lower is better)
Translates to: FRKQEAGKVWNYGGQSPGTALLL*LQSRLN
Trigger: GTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGT...TCCAGGTGACTGGCCACCATAATTCCAAACCTTTCCAGCCTCTTGCTTCCTGAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CAA 90 bp TCAGAATCCATACTATCTCTTCAGGAAGCAAGAGGCTGGAAAGGTTaGGAATTATGGTGGCCAGTCACCTGGAGGAAGATTCAATTGTTT +
Preference number: 2 (lower is better)
Translates to: SESILSLQEARGWKG*ELWWPVTWRKIQLF
Trigger: AAACAATTGAATCTTCCTCCAGGTGACTGGCCACCATAATTCCAAACCTTTCCAGCCTCTTGCTTCCTGAAGAGATAGTATGGATTCTGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR TCA 90 bp TACCACATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCAGCCACAGTGCTGCATaGCATCTGAGAGGGAAGCTC +
Preference number: 2 (lower is better)
Translates to: YHIISNEGHEGKSLGLYSSHSAA*HLRGKL
Trigger: GAGCTTCCCTCTCAGATGTCATGCAGCACTGTGGCT...GGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAATGTGGTA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR TCA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTTGCTGGATAAAAACATaGGGTACGAAAGTGGTTCAA +
Preference number: 2 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFCWIKT*GTKVVQ
Trigger: TTGAACCACTTTCGTACCTCATGTTTTTATCCAGCA...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR GCA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTGACTACCTGTACAGGTaGACTGTGTTTTTCATACTT +
Preference number: 2 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFDYLYR*TVFFIL
Trigger: AAGTATGAAAAACACAGTGCACCTGTACAGGTAGTC...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR GCA 90 bp CTGGCCTTTCACCTTTCAACAGAATCACTGAAGAGAAATGAAACACATCCATCATCTTGGGCAGCCATCTaGCATTTAACTGTCTCCTTC +
Preference number: 2 (lower is better)
Translates to: LAFHLSTESLKRNETHPSSWAAI*HLTVSF
Trigger: GAAGGAGACAGTTAAATGGCAGATGGCTGCCCAAGA...TGATGGATGTGTTTCATTTCTCTTCAGTGATTCTGTTGAAAGGTGAAAGGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CCA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCCACACAGCCGAAGCATaGCTACTTGCTTTCTATAAA +
Preference number: 2 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLHTAEA*LLAFYK
Trigger: TTTATAGAAAGCAAGTAGCCATGCTTCGGCTGTGTG...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CAA 90 bp GTGAGAGCTAACTTTACTTTCTTCAAAGGGTACACAGTCTCAATATaGCCTGTTGACTTAGCCATCCATTCCTTCTCCACTGATCTGAAC +
Preference number: 2 (lower is better)
Translates to: VRANFTFFKGYTVSI*PVDLAIHSFSTDLN
Trigger: GTTCAGATCAGTGGAGAAGGAATGGATGGCTAAGTCAACAGGCAATATTGAGACTGTGTACCCTTTGAAGAAAGTAAAGTTAGCTCTCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CAA 90 bp CAGGATTGGCCTGTTGGGCTGGGAGTTGGGACAACTGATCATTGTTaGAAAGAGATTTTAACAGTGCATTTTCTCGTTCAAGTAAAGAGT +
Preference number: 2 (lower is better)
Translates to: QDWPVGLGVGTTDHC*KEILTVHFLVQVKS
Trigger: ACTCTTTACTTGAACGAGAAAATGCACTGTTAAAATCTCTTTCAAACAATGATCAGTTGTCCCAACTCCCAGCCCAACAGGCCAATCCTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
3UTR-3UTR TCA 90 bp TTGTATCCTAGGAAGGAAGGAATATATAGGATAGGCACACGGTTGCATGTTCTTTATCACAATAACTGGTaGCTACCTGTACAGGTGCAC +
Preference number: 2 (lower is better)
Translates to: LYPRKEGIYRIGTRLHVLYHNNW*LPVQVH
Trigger: GTGCACCTGTACAGGTAGTCACCAGTTATTGTGATA...AAGAACATGCAACCGTGTGCCTATCCTATATATTCCTTCCTTCCTAGGATACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR TCA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAATATCACAATAACTGGTaGCTACCTGTACAGGTGCAC +
Preference number: 2 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQYHNNW*LPVQVH
Trigger: GTGCACCTGTACAGGTAGTCACCAGTTATTGTGATA...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR CCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTTTGCTTTCTATAAAGTaGAAAGAACACCAGTGGCAC +
Preference number: 2 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTLLSIK*KEHQWH
Trigger: GTGCCACTGGTGTTCTTTCCACTTTATAGAAAGCAA...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR CCA 90 bp CTTACCACTTACCTAGCATACAGCCTTGTATTTATCTCAGAGTTCTCAGTCCTACTCAAGGTACATCCATaGGTGGTAAGAAACATGGGA +
Preference number: 2 (lower is better)
Translates to: LTTYLAYSLVFISEFSVLLKVHP*VVRNMG
Trigger: TCCCATGTTTCTTACCACCCATGGATGTACCTTGAG...TAGGACTGAGAACTCTGAGATAAATACAAGGCTGTATGCTAGGTAAGTGGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CCA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAACTCAAGGTACATCCATaGGTGGTAAGAAACATGGGA +
Preference number: 2 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQLKVHP*VVRNMG
Trigger: TCCCATGTTTCTTACCACCCATGGATGTACCTTGAG...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR CCA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTACAGCTTTGCTTCTTTaGTTACAAAGTAGGTTGAAC +
Preference number: 2 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFTALLL*LQSRLN
Trigger: GTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGT...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR CCA 90 bp CTTACCACTTACCTAGCATACAGCCTTGTATTTATCTCAGAGTTCTCAGTCCTATGGTGGCCAGTCACCTaGAGGAAGATTCAATTGTTT +
Preference number: 2 (lower is better)
Translates to: LTTYLAYSLVFISEFSVLWWPVT*RKIQLF
Trigger: AAACAATTGAATCTTCCTCCAGGTGACTGGCCACCA...TAGGACTGAGAACTCTGAGATAAATACAAGGCTGTATGCTAGGTAAGTGGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CAA 90 bp ACAAAAGATGGCTCACTTCATTTTTGTTTCTGTACAACTGGTGCATaGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTT +
Preference number: 2 (lower is better)
Translates to: TKDGSLHFCFCTTGA*YTSSAPPYDLFVLF
Trigger: AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGTTGTACAGAAACAAAAATGAAGTGAGCCATCTTTTGT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CAA 90 bp AAAATCACTTTAAGTGCCAGGCATCAAACAAAATCTTGTGCATTCTaGGGCAGCCATCTGCCATTTAACTGTCTCCTTCTGAAACCCTTT +
Preference number: 2 (lower is better)
Translates to: KITLSARHQTKSCAF*GSHLPFNCLLLKPF
Trigger: AAAGGGTTTCAGAAGGAGACAGTTAAATGGCAGATGGCTGCCCAAGAATGCACAAGATTTTGTTTGATGCCTGGCACTTAAAGTGATTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR TCA 90 bp CTGGCCTTTCACCTTTCAACAGAATCACTGAAGAGAAATGAAACACATCCATCATGCTGGATAAAAACATaGGGTACGAAAGTGGTTCAA +
Preference number: 2 (lower is better)
Translates to: LAFHLSTESLKRNETHPSCWIKT*GTKVVQ
Trigger: TTGAACCACTTTCGTACCTCATGTTTTTATCCAGCA...TGATGGATGTGTTTCATTTCTCTTCAGTGATTCTGTTGAAAGGTGAAAGGCCAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR TCA 90 bp CTTACCACTTACCTAGCATACAGCCTTGTATTTATCTCAGAGTTCTCAGTCCTATCCAGAAGGATTATTTaGTGCAAAAGCTTTCTGACG +
Preference number: 2 (lower is better)
Translates to: LTTYLAYSLVFISEFSVLSRRII*CKSFLT
Trigger: CGTCAGAAAGCTTTTGCATCAAATAATCCTTCTGGA...TAGGACTGAGAACTCTGAGATAAATACAAGGCTGTATGCTAGGTAAGTGGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR GCA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAAAATGCAGACTCTCCTTaGTTTACTAAACCCCATCTA +
Preference number: 2 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQNADSP*FTKPHL
Trigger: TAGATGGGGTTTAGTAAAGCAAGGAGAGTCTGCATT...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR GCA 90 bp CTTACCACTTACCTAGCATACAGCCTTGTATTTATCTCAGAGTTCTCAGTCCTATTAGGACAGCCAAAATaGATGTTGCTTATGAGACGA +
Preference number: 2 (lower is better)
Translates to: LTTYLAYSLVFISEFSVLLGQPK*MLLMRR
Trigger: TCGTCTCATAAGCAACATGCATTTTGGCTGTCCTAA...TAGGACTGAGAACTCTGAGATAAATACAAGGCTGTATGCTAGGTAAGTGGTAAG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CCA 90 bp TGTACACACATAGTTATTTGCAGAAGTACACTATACAGTATTGTGTATGGCATGTGTGCCTCGTGGAAATaGGGAACAGATTTGGATGGA +
Preference number: 2 (lower is better)
Translates to: CTHIVICRSTLYSIVYGMCASWK*GTDLDG
Trigger: TCCATCCAAATCTGTTCCCCATTTCCACGAGGCACA...CATGCCATACACAATACTGTATAGTGTACTTCTGCAAATAACTATGTGTGTACA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CAA 90 bp AATAAACTTCAATTTGTCCCATGGAAATGCTGTCTCACCACTCTTTaGCATTTTTCTAAACTGTCTCCAGTTTTTACCCACCACTCTACC +
Preference number: 2 (lower is better)
Translates to: NKLQFVPWKCCLTTL*HFSKLSPVFTHHST
Trigger: GGTAGAGTGGTGGGTAAAAACTGGAGACAGTTTAGAAAAATGCAAAAGAGTGGTGAGACAGCATTTCCATGGGACAAATTGAAGTTTATT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CCA 90 bp TGTACACACATAGTTATTTGCAGAAGTACACTATACAGTATTGTGTATGGCATGCAGGAAGCAAGAGGCTaGAAAGGTTTGGAATTATGG +
Preference number: 2 (lower is better)
Translates to: CTHIVICRSTLYSIVYGMQEARG*KGLELW
Trigger: CCATAATTCCAAACCTTTCCAGCCTCTTGCTTCCTG...CATGCCATACACAATACTGTATAGTGTACTTCTGCAAATAACTATGTGTGTACA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CAA 90 bp AATAGGAGACAGGGATGTTCTCTGGAAGATCAAATGGTGGGCCAATaGGTACAAACATCAGAGGATATTAGTATTAGAAAATTGAAACAC +
Preference number: 2 (lower is better)
Translates to: NRRQGCSLEDQMVGQ*VQTSEDISIRKLKH
Trigger: GTGTTTCAATTTTCTAATACTAATATCCTCTGATGTTTGTACCAATTGGCCCACCATTTGATCTTCCAGAGAACATCCCTGTCTCCTATT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR TCA 90 bp TGTACACACATAGTTATTTGCAGAAGTACACTATACAGTATTGTGTATGGCATGCTGTTATTTATAACGTaGCAGGAAGGCTCAAGGTAC +
Preference number: 2 (lower is better)
Translates to: CTHIVICRSTLYSIVYGMLLFIT*QEGSRY
Trigger: GTACCTTGAGCCTTCCTGTCACGTTATAAATAACAG...CATGCCATACACAATACTGTATAGTGTACTTCTGCAAATAACTATGTGTGTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR GCA 90 bp TTGTATCCTAGGAAGGAAGGAATATATAGGATAGGCACACGGTTGCATGTTCTTTTAAGAGCTTTACACTaGCAATTTTCATTCTGGAGA +
Preference number: 2 (lower is better)
Translates to: LYPRKEGIYRIGTRLHVLLRALH*QFSFWR
Trigger: TCTCCAGAATGAAAATTGGCAGTGTAAAGCTCTTAA...AAGAACATGCAACCGTGTGCCTATCCTATATATTCCTTCCTTCCTAGGATACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR GCA 90 bp TGTACACACATAGTTATTTGCAGAAGTACACTATACAGTATTGTGTATGGCATGCTTCGGTCAGATTCTTaGAATTCCTTCGACAGGAAA +
Preference number: 2 (lower is better)
Translates to: CTHIVICRSTLYSIVYGMLRSDS*NSFDRK
Trigger: TTTCCTGTCGAAGGAATTGCAAGAATCTGACCGAAG...CATGCCATACACAATACTGTATAGTGTACTTCTGCAAATAACTATGTGTGTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CCA 90 bp TGTACACACATAGTTATTTGCAGAAGTACACTATACAGTATTGTGTATGGCATGCATGAGGTACGAAAGTaGTTCAAAGATTACAGGCCA +
Preference number: 2 (lower is better)
Translates to: CTHIVICRSTLYSIVYGMHEVRK*FKDYRP
Trigger: TGGCCTGTAATCTTTGAACCACTTTCGTACCTCATG...CATGCCATACACAATACTGTATAGTGTACTTCTGCAAATAACTATGTGTGTACA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR GCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTAATGCAGACTCTCCTTaGTTTACTAAACCCCATCTA +
Preference number: 2 (lower is better)
Translates to: STIRVLDKNMRYESGSKINADSP*FTKPHL
Trigger: TAGATGGGGTTTAGTAAAGCAAGGAGAGTCTGCATT...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR GCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTGACTACCTGTACAGGTaGACTGTGTTTTTCATACTT +
Preference number: 2 (lower is better)
Translates to: STIRVLDKNMRYESGSKIDYLYR*TVFFIL
Trigger: AAGTATGAAAAACACAGTGCACCTGTACAGGTAGTC...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR CCA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCTTGCTTTCTATAAAGTaGAAAGAACACCAGTGGCAC +
Preference number: 2 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFLLSIK*KEHQWH
Trigger: GTGCCACTGGTGTTCTTTCCACTTTATAGAAAGCAA...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR CCA 90 bp ACTCTTAAGGTGTATTTGCAAACTGGAGTCAGAATCCATACTATCTCTTCAGGAAAAGCAGAGGAATCGTaGCAATTTCTATTAGAAAGT +
Preference number: 2 (lower is better)
Translates to: TLKVYLQTGVRIHTISSGKAEES*QFLLES
Trigger: ACTTTCTAATAGAAATTGCCACGATTCCTCTGCTTT...TCCTGAAGAGATAGTATGGATTCTGACTCCAGTTTGCAAATACACCTTAAGAGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CCA 90 bp AAATTCGTAACCTATTATGGAAATAGGAGACAGGGATGTTCTCTGGAAGATCAAAATGGGGAACAGATTTaGATGGAAACTTCATTACAC +
Preference number: 2 (lower is better)
Translates to: KFVTYYGNRRQGCSLEDQNGEQI*METSLH
Trigger: GTGTAATGAAGTTTCCATCCAAATCTGTTCCCCATT...TTGATCTTCCAGAGAACATCCCTGTCTCCTATTTCCATAATAGGTTACGAATTT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR TCA 90 bp TACCACATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCCTACAGGCACCTTTCTaGATTCAAGTAAAAGTTTTG +
Preference number: 2 (lower is better)
Translates to: YHIISNEGHEGKSLGLYSLQAPF*IQVKVL
Trigger: CAAAACTTTTACTTGAATTCAGAAAGGTGCCTGTAG...GGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAATGTGGTA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CCA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCAAAGCAGAGGAATCGTaGCAATTTCTATTAGAAAGT +
Preference number: 2 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFKAEES*QFLLES
Trigger: ACTTTCTAATAGAAATTGCCACGATTCCTCTGCTTT...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
34% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR CAA 90 bp GGCTTAAGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTACCAGGATTGGCCTGTaGGGCTGGGAGTTGGGACAA +
Preference number: 3 (lower is better)
Translates to: GLRKLYAEETFGCCGGCVTRIGL*GWELGQ
Trigger: TTGTCCCAACTCCCAGCCCAACAGGCCAATCCTGGT...AACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTTAAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
3UTR GCA 72 bp ACTGATGACACACAAGTGGACCGACAGCCACAGTGCTaGATGACATCTGAGAGGGAAGCTCCTGTAGAACGA +
Preference number: 3 (lower is better)
Translates to: TDDTQVDRQPQC*MTSEREAPVER
Trigger: TCGTTCTACAGGAGCTTCCCTCTCAGATGTCATGCAGCACTGTGGCTGTCGGTCCACTTGTGTGTCATCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR GCA 72 bp TGTACTGATGACACACAAGTGGACCGACAGCCACAGTaGTGCATGACATCTGAGAGGGAAGCTCCTGTAGAA +
Preference number: 3 (lower is better)
Translates to: CTDDTQVDRQPQ*CMTSEREAPVE
Trigger: TTCTACAGGAGCTTCCCTCTCAGATGTCATGCAGCACTGTGGCTGTCGGTCCACTTGTGTGTCATCAGTACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR TCA 72 bp ACATGGTACTTCACCTTCTACTTTCACATTGGATGCTaGGATCCTGGGGTTGGAGAGGGGGCAAAGATCATG +
Preference number: 3 (lower is better)
Translates to: TWYFTFYFHIGC*DPGVGEGAKIM
Trigger: CATGATCTTTGCCCCCTCTCCAACCCCAGGATCTCAGCATCCAATGTGAAAGTAGAAGGTGAAGTACCATGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CCA 72 bp CTTCACCTTCTACTTTCACATTGGATGCTGAGATCCTaGGGTTGGAGAGGGGGCAAAGATCATGTCCTAAAC +
Preference number: 3 (lower is better)
Translates to: LHLLLSHWMLRS*GWRGGKDHVLN
Trigger: GTTTAGGACATGATCTTTGCCCCCTCTCCAACCCCAGGATCTCAGCATCCAATGTGAAAGTAGAAGGTGAAG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CCA 72 bp CTATCATTGCTTGTTGTTGAGAAGTGCTACCAGGATTaGCCTGTTGGGCTGGGAGTTGGGACAACTGATCAT +
Preference number: 3 (lower is better)
Translates to: LSLLVVEKCYQD*PVGLGVGTTDH
Trigger: ATGATCAGTTGTCCCAACTCCCAGCCCAACAGGCCAATCCTGGTAGCACTTCTCAACAACAAGCAATGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
3UTR-3UTR CAA 90 bp AACGTGACAGGAAGGCTCAAGGTACATCCATGGGTGGTAAGAAACATGGGAGAGGCTCCTGTAGAACGATaGTCTAATACTGAAAAGGCC +
Preference number: 3 (lower is better)
Translates to: NVTGRLKVHPWVVRNMGEAPVER*SNTEKA
Trigger: GGCCTTTTCAGTATTAGACAATCGTTCTACAGGAGC...CTCTCCCATGTTTCTTACCACCCATGGATGTACCTTGAGCCTTCCTGTCACGTT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR CAA 90 bp TTCAGGAAGCAAGAGGCTGGAAAGGTTTGGAATTATGGTGGCCAGTCACCTGGAGCATCAAACAAAATCTaGTGCATTCTTGGGCAGCCA +
Preference number: 3 (lower is better)
Translates to: FRKQEAGKVWNYGGQSPGASNKI*CILGQP
Trigger: TGGCTGCCCAAGAATGCACAAGATTTTGTTTGATGC...TCCAGGTGACTGGCCACCATAATTCCAAACCTTTCCAGCCTCTTGCTTCCTGAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CAA 90 bp CTATCATTGCTTGTTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGCTGGGAGCTTGTTCTATTTTGTaGTCAATGGCTACAACACCG +
Preference number: 3 (lower is better)
Translates to: LSLLVVEKCYQDWPVGLGACSIL*SMATTP
Trigger: CGGTGTTGTAGCCATTGACAACAAAATAGAACAAGC...TCCCAGCCCAACAGGCCAATCCTGGTAGCACTTCTCAACAACAAGCAATGATAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
3UTR CCA 72 bp TACTATCTCTTCAGGAAGCAAGAGGCTGGAAAGGTTTaGAATTATGGTGGCCAGTCACCTGGAGGAAGATTC +
Preference number: 3 (lower is better)
Translates to: YYLFRKQEAGKV*NYGGQSPGGRF
Trigger: GAATCTTCCTCCAGGTGACTGGCCACCATAATTCCAAACCTTTCCAGCCTCTTGCTTCCTGAAGAGATAGTA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CCA 72 bp TCAGAATCCATACTATCTCTTCAGGAAGCAAGAGGCTaGAAAGGTTTGGAATTATGGTGGCCAGTCACCTGG +
Preference number: 3 (lower is better)
Translates to: SESILSLQEARG*KGLELWWPVTW
Trigger: CCAGGTGACTGGCCACCATAATTCCAAACCTTTCCAGCCTCTTGCTTCCTGAAGAGATAGTATGGATTCTGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CCA 72 bp CTTCTACTTTCACATTGGATGCTGAGATCCTGGGGTTaGAGAGGGGGCAAAGATCATGTCCTAAACAGCTTT +
Preference number: 3 (lower is better)
Translates to: LLLSHWMLRSWG*RGGKDHVLNSF
Trigger: AAAGCTGTTTAGGACATGATCTTTGCCCCCTCTCCAACCCCAGGATCTCAGCATCCAATGTGAAAGTAGAAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR GCA 72 bp CCATTTCAGGAACCCCCTGAGAAAGACACCCTTTACTaGATTTCTTGTCATTGGTTGGTTTGTGTAGCCTCA +
Preference number: 3 (lower is better)
Translates to: PFQEPPEKDTLY*ISCHWLVCVAS
Trigger: TGAGGCTACACAAACCAACCAATGACAAGAAATGCAGTAAAGGGTGTCTTTCTCAGGGGGTTCCTGAAATGG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CCA 72 bp ACACAGCCGAAGCATGGCTACTTGCTTTCTATAAAGTaGAAAGAACACCAGTGGCACACAAGGAAAGATTGC +
Preference number: 3 (lower is better)
Translates to: TQPKHGYLLSIK*KEHQWHTRKDC
Trigger: GCAATCTTTCCTTGTGTGCCACTGGTGTTCTTTCCACTTTATAGAAAGCAAGTAGCCATGCTTCGGCTGTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CCA 72 bp GTTCCTGACTCTGGAGTTCAGTGTGCCTCGTGGAAATaGGGAACAGATTTGGATGGAAACTTCATTACACAA +
Preference number: 3 (lower is better)
Translates to: VPDSGVQCASWK*GTDLDGNFITQ
Trigger: TTGTGTAATGAAGTTTCCATCCAAATCTGTTCCCCATTTCCACGAGGCACACTGAACTCCAGAGTCAGGAAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CAA 90 bp CTATCATTGCTTGTTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGCTGGGACACCAGATCCATTGCTaGTTCTATTTTGTTGTCAAT +
Preference number: 3 (lower is better)
Translates to: LSLLVVEKCYQDWPVGLGHQIHC*FYFVVN
Trigger: ATTGACAACAAAATAGAACAAGCAATGGATCTGGTG...TCCCAGCCCAACAGGCCAATCCTGGTAGCACTTCTCAACAACAAGCAATGATAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
3UTR CCA 72 bp ATTTATAACGTGACAGGAAGGCTCAAGGTACATCCATaGGTGGTAAGAAACATGGGAGAGCCACCAAAACTT +
Preference number: 3 (lower is better)
Translates to: IYNVTGRLKVHP*VVRNMGEPPKL
Trigger: AAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGATGTACCTTGAGCCTTCCTGTCACGTTATAAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CCA 72 bp AGACACTGGCCTAGTATTTATTATATACGCCAAGTGTaGGAGAGGTTTCCTTGTCTGCAGTCTTCTTTGGGT +
Preference number: 3 (lower is better)
Translates to: RHWPSIYYIRQV*ERFPCLQSSLG
Trigger: ACCCAAAGAAGACTGCAGACAAGGAAACCTCTCCCACACTTGGCGTATATAATAAATACTAGGCCAGTGTCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CCA 72 bp TCTAATACTGAAAAGGCCAAGCACACAGCCGAAGCATaGCTACTTGCTTTCTATAAAGTGGAAAGAACACCA +
Preference number: 3 (lower is better)
Translates to: SNTEKAKHTAEA*LLAFYKVERTP
Trigger: TGGTGTTCTTTCCACTTTATAGAAAGCAAGTAGCCATGCTTCGGCTGTGTGCTTGGCCTTTTCAGTATTAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR CAA 90 bp ACTCTTAAGGTGTATTTGCAAACTGGAGTCAGAATCCATACTATCTCTTCAGGATGGAGGAAGATTCAATaGTTTACCACTGGGCTGAGG +
Preference number: 3 (lower is better)
Translates to: TLKVYLQTGVRIHTISSGWRKIQ*FTTGLR
Trigger: CCTCAGCCCAGTGGTAAACAATTGAATCTTCCTCCA...TCCTGAAGAGATAGTATGGATTCTGACTCCAGTTTGCAAATACACCTTAAGAGT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CAA 90 bp CTTACCACTTACCTAGCATACAGCCTTGTATTTATCTCAGAGTTCTCAGTCCTACATCTGGAAGACATTTaGAATTGCAGTGGGCAAGAG +
Preference number: 3 (lower is better)
Translates to: LTTYLAYSLVFISEFSVLHLEDI*NCSGQE
Trigger: CTCTTGCCCACTGCAATTCAAAATGTCTTCCAGATG...TAGGACTGAGAACTCTGAGATAAATACAAGGCTGTATGCTAGGTAAGTGGTAAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CCA 72 bp GAAATAGGAGACAGGGATGTTCTCTGGAAGATCAAATaGTGGGCCAATTGGTACAAACATCAGAGGATATTA +
Preference number: 3 (lower is better)
Translates to: EIGDRDVLWKIK*WANWYKHQRIL
Trigger: TAATATCCTCTGATGTTTGTACCAATTGGCCCACCATTTGATCTTCCAGAGAACATCCCTGTCTCCTATTTC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CAA 90 bp ACTCTTAAGGTGTATTTGCAAACTGGAGTCAGAATCCATACTATCTCTTCAGGAGCTCCTGTAGAACGATaGTCTAATACTGAAAAGGCC +
Preference number: 3 (lower is better)
Translates to: TLKVYLQTGVRIHTISSGAPVER*SNTEKA
Trigger: GGCCTTTTCAGTATTAGACAATCGTTCTACAGGAGC...TCCTGAAGAGATAGTATGGATTCTGACTCCAGTTTGCAAATACACCTTAAGAGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CAA 90 bp ATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCAACAGCTGTACAACTGGTGCATaGTACACTAGCTCAGCTCCA +
Preference number: 3 (lower is better)
Translates to: IISNEGHEGKSLGLYSNSCTTGA*YTSSAP
Trigger: TGGAGCTGAGCTAGTGTACAATGCACCAGTTGTACA...GCTGTTGGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR TCA 72 bp CTTCAAGAATTAAATGTCACCATTTCAGGAACCCCCTaGGAAAGACACCCTTTACTGCATTTCTTGTCATTG +
Preference number: 3 (lower is better)
Translates to: LQELNVTISGTP*ERHPLLHFLSL
Trigger: CAATGACAAGAAATGCAGTAAAGGGTGTCTTTCTCAGGGGGTTCCTGAAATGGTGACATTTAATTCTTGAAG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR TCA 72 bp TGTCTCCAGTTTTTACCCACCACTCTACCAAAGAACTaGATTGAGATTCTCCCACTATCATCCAATGAATCA +
Preference number: 3 (lower is better)
Translates to: CLQFLPTTLPKN*IEILPLSSNES
Trigger: TGATTCATTGGATGATAGTGGGAGAATCTCAATTCAGTTCTTTGGTAGAGTGGTGGGTAAAAACTGGAGACA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CAA 90 bp CTGGCCTTTCACCTTTCAACAGAATCACTGAAGAGAAATGAAACACATCCATCAAAATCATACGAAATGTaGAAAAGCAGAGGAATCGTG +
Preference number: 3 (lower is better)
Translates to: LAFHLSTESLKRNETHPSKSYEM*KSRGIV
Trigger: CACGATTCCTCTGCTTTTCAACATTTCGTATGATTT...TGATGGATGTGTTTCATTTCTCTTCAGTGATTCTGTTGAAAGGTGAAAGGCCAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR TCA 72 bp TGCAAGATGACAGAAACTATCATCTGGAAGACATTTTaGATTGCAGTGGGCAAGAGCACTTTGTGGTTATTT +
Preference number: 3 (lower is better)
Translates to: CKMTETIIWKTF*IAVGKSTLWLF
Trigger: AAATAACCACAAAGTGCTCTTGCCCACTGCAATTCAAAATGTCTTCCAGATGATAGTTTCTGTCATCTTGCA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR GCA 72 bp GATGACAGAAACTATCATCTGGAAGACATTTTGAATTaGAGTGGGCAAGAGCACTTTGTGGTTATTTTATGG +
Preference number: 3 (lower is better)
Translates to: DDRNYHLEDILN*SGQEHFVVILW
Trigger: CCATAAAATAACCACAAAGTGCTCTTGCCCACTGCAATTCAAAATGTCTTCCAGATGATAGTTTCTGTCATC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR TCA 72 bp TATCTTGCCCATAGTGGCTCTACTAGAATCTCACTCTaGATCCTTAGGGTTATTACATATTCAAGTCTACAT +
Preference number: 3 (lower is better)
Translates to: YLAHSGSTRISL*ILRVITYSSLH
Trigger: ATGTAGACTTGAATATGTAATAACCCTAAGGATTCAGAGTGAGATTCTAGTAGAGCCACTATGGGCAAGATA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CCA 72 bp ATCTCAGAGTTCTCAGTCCTACTGGAGATTCATTTTTaGCATCAGGTACCTGAGTTATTAACTTCATTCATT +
Preference number: 3 (lower is better)
Translates to: ISEFSVLLEIHF*HQVPELLTSFI
Trigger: AATGAATGAAGTTAATAACTCAGGTACCTGATGCCAAAAATGAATCTCCAGTAGGACTGAGAACTCTGAGAT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CAA 90 bp ATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCAACAGCCTCCATTACACAGCTTaGCTTCTTTGGTTACAAAGT +
Preference number: 3 (lower is better)
Translates to: IISNEGHEGKSLGLYSNSLHYTA*LLWLQS
Trigger: ACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAG...GCTGTTGGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAAT
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR-3UTR CAA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTCTCCATTACACAGCTTaGCTTCTTTGGTTACAAAGT +
Preference number: 3 (lower is better)
Translates to: STIRVLDKNMRYESGSKILHYTA*LLWLQS
Trigger: ACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAG...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR-3UTR CAA 90 bp TGTACACACATAGTTATTTGCAGAAGTACACTATACAGTATTGTGTATGGCATGCACCTGGTCTATAGGTaGAGACAGAAAATTAAAGGT +
Preference number: 3 (lower is better)
Translates to: CTHIVICRSTLYSIVYGMHLVYR*RQKIKG
Trigger: ACCTTTAATTTTCTGTCTCAACCTATAGACCAGGTG...CATGCCATACACAATACTGTATAGTGTACTTCTGCAAATAACTATGTGTGTACA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CCA 72 bp CAGAAACTATCATCTGGAAGACATTTTGAATTGCAGTaGGCAAGAGCACTTTGTGGTTATTTTATGGAAATA +
Preference number: 3 (lower is better)
Translates to: QKLSSGRHFELQ*ARALCGYFMEI
Trigger: TATTTCCATAAAATAACCACAAAGTGCTCTTGCCCACTGCAATTCAAAATGTCTTCCAGATGATAGTTTCTG
36% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CCA 72 bp AAGCTATTAAGAGCTTTACACTGCCAATTTTCATTCTaGAGAAAAACCCACCATACTACATTAATTCCTACT +
Preference number: 3 (lower is better)
Translates to: KLLRALHCQFSF*RKTHHTTLIPT
Trigger: AGTAGGAATTAATGTAGTATGGTGGGTTTTTCTCCAGAATGAAAATTGGCAGTGTAAAGCTCTTAATAGCTT
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp TTCAGGAAGCAAGAGGCTGGAAAGGTTTGGAATTATGGTGGCCAGTCACCTGGAGGGCTGCGCAGGGCTTaGCGGCTGCAGGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: FRKQEAGKVWNYGGQSPGGLRRA*RLQGHV
Trigger: CACGTGGCCCTGCAGCCGCCAAGCCCTGCGCAGCCC...TCCAGGTGACTGGCCACCATAATTCCAAACCTTTCCAGCCTCTTGCTTCCTGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp AACGTGACAGGAAGGCTCAAGGTACATCCATGGGTGGTAAGAAACATGGGAGAGGGGCTGCGCAGGGCTTaGCGGCTGCAGGGCCACGTG +
Preference number: 4 (lower is better)
Translates to: NVTGRLKVHPWVVRNMGEGLRRA*RLQGHV
Trigger: CACGTGGCCCTGCAGCCGCCAAGCCCTGCGCAGCCC...CTCTCCCATGTTTCTTACCACCCATGGATGTACCTTGAGCCTTCCTGTCACGTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp AACGTGACAGGAAGGCTCAAGGTACATCCATGGGTGGTAAGAAACATGGGAGAGAGCCCGTGCGCCCCCTaGATGGAGGCCACCACCACC +
Preference number: 4 (lower is better)
Translates to: NVTGRLKVHPWVVRNMGESPCAP*MEATTT
Trigger: GGTGGTGGTGGCCTCCATGCAGGGGGCGCACGGGCT...CTCTCCCATGTTTCTTACCACCCATGGATGTACCTTGAGCCTTCCTGTCACGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp AACGTGACAGGAAGGCTCAAGGTACATCCATGGGTGGTAAGAAACATGGGAGAGCCACTGCCACCCATCTaGTGCGGAGGCTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: NVTGRLKVHPWVVRNMGEPLPPI*CGGCTG
Trigger: GCCCGTGCAGCCTCCGCAGCAGATGGGTGGCAGTGG...CTCTCCCATGTTTCTTACCACCCATGGATGTACCTTGAGCCTTCCTGTCACGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp AACGTGACAGGAAGGCTCAAGGTACATCCATGGGTGGTAAGAAACATGGGAGAGTCTCGGTGTCCTCGGTaGTGCTGGTGGCCACCTGAG +
Preference number: 4 (lower is better)
Translates to: NVTGRLKVHPWVVRNMGESRCPR*CWWPPE
Trigger: CTCAGGTGGCCACCAGCATCACCGAGGACACCGAGA...CTCTCCCATGTTTCTTACCACCCATGGATGTACCTTGAGCCTTCCTGTCACGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCCAGGCTGCGCCAGGTTaGCATTCGGCGGCGGCGGCA +
Preference number: 4 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLQAAPG*HSAAAA
Trigger: TGCCGCCGCCGCCGAATGTCAACCTGGCGCAGCCTG...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTCCGGGCACCACGGTGTaGGGACCACCAGGCACGGCT +
Preference number: 4 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTPGTTV*GPPGTA
Trigger: AGCCGTGCCTGGTGGTCCTCACACCGTGGTGCCCGG...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCCCGGGCACCACGGTGTaGGGACCACCAGGCACGGCT +
Preference number: 4 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLPGTTV*GPPGTA
Trigger: AGCCGTGCCTGGTGGTCCTCACACCGTGGTGCCCGG...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTGGCTGCAGGGCCACGTaGGGCGGCAGGTACTCACTC +
Preference number: 4 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFGCRAT*GGRYSL
Trigger: GAGTGAGTACCTGCCGCCGCACGTGGCCCTGCAGCC...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTTGGCTGCTCAGCTGCTaGGACTGGCCCAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTWLLSC*DWPRGA
Trigger: CGCGCCTCTGGGCCAGTCTCAGCAGCTGAGCAGCCA...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCTGGCTGCTCAGCTGCTaGGACTGGCCCAGAGGCGCG +
Preference number: 4 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLWLLSC*DWPRGA
Trigger: CGCGCCTCTGGGCCAGTCTCAGCAGCTGAGCAGCCA...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAACCCGAGTCCAGCCCGTaGGCCCCCTGCATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQPESSP*APCMEA
Trigger: GGCCTCCATGCAGGGGGCGCACGGGCTGGACTCGGG...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTGCCAGGGCCACAGGCTaGGCCAGGTTGACATTCGGC +
Preference number: 4 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFARATG*ARLTFG
Trigger: GCCGAATGTCAACCTGGCGCAGCCTGTGGCCCTGGC...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp ATCTCAGAGTTCTCAGTCCTACTGGAGATTCATTTTTGGCATCAGGTACCTGAGCCACTGCCACCCATCTaGTGCGGAGGCTGCACGGGC +
Preference number: 4 (lower is better)
Translates to: ISEFSVLLEIHFWHQVPEPLPPI*CGGCTG
Trigger: GCCCGTGCAGCCTCCGCAGCAGATGGGTGGCAGTGG...CTCAGGTACCTGATGCCAAAAATGAATCTCCAGTAGGACTGAGAACTCTGAGAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTAACGGCTGCTGTCATTaGCTGCGGCCCGGTCGCCGC +
Preference number: 4 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTNGCCH*LRPGRR
Trigger: GCGGCGACCGGGCCGCAGCCAATGACAGCAGCCGTT...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp CTTACCACTTACCTAGCATACAGCCTTGTATTTATCTCAGAGTTCTCAGTCCTAGCGGCTGCCCGACGCTaGAACTCTGCGGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: LTTYLAYSLVFISEFSVLAAARR*NSAAGR
Trigger: TCGCCCAGCCGCAGAGTTTCAGCGTCGGGCAGCCGC...TAGGACTGAGAACTCTGAGATAAATACAAGGCTGTATGCTAGGTAAGTGGTAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR TCA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAAGCGGCTGCCCGACGCTaGAACTCTGCGGCTGGGCGA +
Preference number: 4 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQAAARR*NSAAGR
Trigger: TCGCCCAGCCGCAGAGTTTCAGCGTCGGGCAGCCGC...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTCGCTGCTGCTCCGGCTaGCTGGCGTATGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTRCCSG*LAYGCS
Trigger: TGAGCAGCCATACGCCAGTCAGCCGGAGCAGCAGCG...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAAGCTGCTGTCATTGGCTaGGGCCCGGTCGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQAAVIG*GPVAAP
Trigger: GGGAGCGGCGACCGGGCCGCAGCCAATGACAGCAGC...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTGGCTCCCCGCTCCCGTaGTCTAGTTTGATCACGCGG +
Preference number: 4 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFGSPLP*SSLITR
Trigger: CCGCGTGATCAAACTAGACCACGGGAGCGGGGAGCC...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAAGGCACGGCTGGCAGCTaGCCACTGCCACCCATCTGC +
Preference number: 4 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQGTAGS*PLPPIC
Trigger: GCAGATGGGTGGCAGTGGTCAGCTGCCAGCCGTGCC...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp AACGTGACAGGAAGGCTCAAGGTACATCCATGGGTGGTAAGAAACATGGGAGAGGGAGGTTGCGTTGGCTaGGGAGGCTGTGCTATCATT +
Preference number: 4 (lower is better)
Translates to: NVTGRLKVHPWVVRNMGEGGCVG*GGCAII
Trigger: AATGATAGCACAGCCTCCTCAGCCAACGCAACCTCC...CTCTCCCATGTTTCTTACCACCCATGGATGTACCTTGAGCCTTCCTGTCACGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCGCGGCTGGGCGAGAGTaGGCTGGCTCATTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLAAGRE*AGSFSP
Trigger: CGGAGAAAATGAGCCAGCCCACTCTCGCCCAGCCGC...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp ATCTCAGAGTTCTCAGTCCTACTGGAGATTCATTTTTGGCATCAGGTACCTGAGCAGCGACGCCGAACTTaGAGCCACAGCCCCACCTAC +
Preference number: 4 (lower is better)
Translates to: ISEFSVLLEIHFWHQVPEQRRRT*SHSPTY
Trigger: GTAGGTGGGGCTGTGGCTCCAAGTTCGGCGTCGCTG...CTCAGGTACCTGATGCCAAAAATGAATCTCCAGTAGGACTGAGAACTCTGAGAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp AACGTGACAGGAAGGCTCAAGGTACATCCATGGGTGGTAAGAAACATGGGAGAGCTCACTCTGGCCGGATaGCTGCATCGGCAACAAATG +
Preference number: 4 (lower is better)
Translates to: NVTGRLKVHPWVVRNMGELTLAG*LHRQQM
Trigger: CATTTGTTGCCGATGCAGCCATCCGGCCAGAGTGAG...CTCTCCCATGTTTCTTACCACCCATGGATGTACCTTGAGCCTTCCTGTCACGTT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTGGCAGGTACTCACTCTaGCCGGATGGCTGCATCGGC +
Preference number: 4 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTGRYSL*PDGCIG
Trigger: GCCGATGCAGCCATCCGGCCAGAGTGAGTACCTGCC...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCCGCTGCAGGCACGTTTaGAACTCCGGGCACCACGGT +
Preference number: 4 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLRCRHV*NSGHHG
Trigger: ACCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCG...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTCACACTAGGCACGCTTaGAACGGGTACCGCTGCAGG +
Preference number: 4 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFHTRHA*NGYRCR
Trigger: CCTGCAGCGGTACCCGTTCCAAGCGTGCCTAGTGTG...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTGCTGCTCCGGCTGACTaGCGTATGGCTGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTAAPAD*RMAAQL
Trigger: CAGCTGAGCAGCCATACGCCAGTCAGCCGGAGCAGC...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCGTTGGCGGGCGCAGCTaGAGCGGCTGCCAGCTGCCC +
Preference number: 4 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFVGGRS*SGCQLP
Trigger: GGGCAGCTGGCAGCCGCTTCAGCTGCGCCCGCCAAC...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCGAAGCGGCTGCCAGCTaGCCATCCAGGATGAGGTTC +
Preference number: 4 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLEAAAS*PSRMRF
Trigger: GAACCTCATCCTGGATGGGCAGCTGGCAGCCGCTTC...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp ATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCAACAGCCCCGAGTCCAGCCCGTaGGCCCCCTGCATGGAGGCC +
Preference number: 4 (lower is better)
Translates to: IISNEGHEGKSLGLYSNSPESSP*APCMEA
Trigger: GGCCTCCATGCAGGGGGCGCACGGGCTGGACTCGGG...GCTGTTGGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR GCA 90 bp TTGTATCCTAGGAAGGAAGGAATATATAGGATAGGCACACGGTTGCATGTTCTTGCCAGGGCCACAGGCTaGGCCAGGTTGACATTCGGC +
Preference number: 4 (lower is better)
Translates to: LYPRKEGIYRIGTRLHVLARATG*ARLTFG
Trigger: GCCGAATGTCAACCTGGCGCAGCCTGTGGCCCTGGC...AAGAACATGCAACCGTGTGCCTATCCTATATATTCCTTCCTTCCTAGGATACAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR GCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTCTCTGGCCGGATGGCTaGATCGGCAACAAATGCCCG +
Preference number: 4 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTLWPDG*IGNKCP
Trigger: CGGGCATTTGTTGCCGATGCAGCCATCCGGCCAGAG...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTGAGGAGACATTCGGCTaGTGTGGAGGTTGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFEETFG*CGGCVG
Trigger: GCCAACGCAACCTCCACAGCAGCCGAATGTCTCCTC...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp GTGCTTCTTAGGCCTGTGTATGCTTTCAGAGCTTTGAGTAGGCTTTTGTGTTTACGCTGCAGGCACGTTTaGAACTCCGGGCACCACGGT +
Preference number: 4 (lower is better)
Translates to: VLLRPVYAFRALSRLLCLRCRHV*NSGHHG
Trigger: ACCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCG...TAAACACAAAAGCCTACTCAAAGCTCTGAAAGCATACACAGGCCTAAGAAGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp GGCTTAAGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTCAGGGCATCTGCAACTaGAGGCTTCACAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: GLRKLYAEETFGCCGGCVQGICN*RLHNRL
Trigger: AAGCCTGTTGTGAAGCCTCCAGTTGCAGATGCCCTG...AACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTTAAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
CDS-3UTR CCA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTGACATTCGGCTGCTGTaGAGGTTGCGTTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFDIRLL*RLRWLR
Trigger: CCTCAGCCAACGCAACCTCCACAGCAGCCGAATGTC...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp TGTACACACATAGTTATTTGCAGAAGTACACTATACAGTATTGTGTATGGCATGCAGGCTGCGCCAGGTTaGCATTCGGCGGCGGCGGCA +
Preference number: 4 (lower is better)
Translates to: CTHIVICRSTLYSIVYGMQAAPG*HSAAAA
Trigger: TGCCGCCGCCGCCGAATGTCAACCTGGCGCAGCCTG...CATGCCATACACAATACTGTATAGTGTACTTCTGCAAATAACTATGTGTGTACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR GCA 90 bp TACCACATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCAGCCCGTGCGCCCCCTaGATGGAGGCCACCACCACC +
Preference number: 4 (lower is better)
Translates to: YHIISNEGHEGKSLGLYSSPCAP*MEATTT
Trigger: GGTGGTGGTGGCCTCCATGCAGGGGGCGCACGGGCT...GGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAATGTGGTA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR GCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTGCTGCTGTCATTGGCTaGGGCCCGGTCGCCGCTCCC +
Preference number: 4 (lower is better)
Translates to: STIRVLDKNMRYESGSKIAAVIG*GPVAAP
Trigger: GGGAGCGGCGACCGGGCCGCAGCCAATGACAGCAGC...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTTGGAACGGGTACCGCTaGAGGCACGTTTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTWNGYR*RHVWNS
Trigger: GGAGTTCCAAACGTGCCTGCAGCGGTACCCGTTCCA...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAACAGCGACGCCGAACTTaGAGCCACAGCCCCACCTAC +
Preference number: 4 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQQRRRT*SHSPTY
Trigger: GTAGGTGGGGCTGTGGCTCCAAGTTCGGCGTCGCTG...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCTCCCTGGAGCTGGGTTaGCTGAACGGCTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLSLELG*LNGCCH
Trigger: ATGACAGCAGCCGTTCAGCCAACCCAGCTCCAGGGA...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp TTGTATCCTAGGAAGGAAGGAATATATAGGATAGGCACACGGTTGCATGTTCTTGGCAGGTACTCACTCTaGCCGGATGGCTGCATCGGC +
Preference number: 4 (lower is better)
Translates to: LYPRKEGIYRIGTRLHVLGRYSL*PDGCIG
Trigger: GCCGATGCAGCCATCCGGCCAGAGTGAGTACCTGCC...AAGAACATGCAACCGTGTGCCTATCCTATATATTCCTTCCTTCCTAGGATACAA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp CTTACCACTTACCTAGCATACAGCCTTGTATTTATCTCAGAGTTCTCAGTCCTAACCCCAGAGGAAAGCTaGCCGCGGAAGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: LTTYLAYSLVFISEFSVLTPEES*PRKQRW
Trigger: CCACCTCTGCTTCCGCGGCCAGCTTTCCTCTGGGGT...TAGGACTGAGAACTCTGAGATAAATACAAGGCTGTATGCTAGGTAAGTGGTAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp ACTCTTAAGGTGTATTTGCAAACTGGAGTCAGAATCCATACTATCTCTTCAGGAACCACCAGGCACGGCTaGCAGCTGACCACTGCCACC +
Preference number: 4 (lower is better)
Translates to: TLKVYLQTGVRIHTISSGTTRHG*QLTTAT
Trigger: GGTGGCAGTGGTCAGCTGCCAGCCGTGCCTGGTGGT...TCCTGAAGAGATAGTATGGATTCTGACTCCAGTTTGCAAATACACCTTAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTCCAGGATTGGCCTGTTaGGCTGGGAGTTGGGACAAC +
Preference number: 4 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTPGLAC*AGSWDN
Trigger: GTTGTCCCAACTCCCAGCCCAACAGGCCAATCCTGG...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCGGCACGGCTGGCAGCTaGCCACTGCCACCCATCTGC +
Preference number: 4 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFGTAGS*PLPPIC
Trigger: GCAGATGGGTGGCAGTGGTCAGCTGCCAGCCGTGCC...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp TGTACACACATAGTTATTTGCAGAAGTACACTATACAGTATTGTGTATGGCATGGGCTGCAGGGCCACGTaGGGCGGCAGGTACTCACTC +
Preference number: 4 (lower is better)
Translates to: CTHIVICRSTLYSIVYGMGCRAT*GGRYSL
Trigger: GAGTGAGTACCTGCCGCCGCACGTGGCCCTGCAGCC...CATGCCATACACAATACTGTATAGTGTACTTCTGCAAATAACTATGTGTGTACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp AACGTGACAGGAAGGCTCAAGGTACATCCATGGGTGGTAAGAAACATGGGAGAGAGGCGCGGGTACATTTaGCATAGTAACAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: NVTGRLKVHPWVVRNMGERRGYI*HSNRSG
Trigger: ACCACTTCTGTTACTATGCCAAATGTACCCGCGCCT...CTCTCCCATGTTTCTTACCACCCATGGATGTACCTTGAGCCTTCCTGTCACGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTCTGTGGAGGTTGCGTTaGCTGAGGAGGCTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTLWRLR*LRRLCY
Trigger: ATAGCACAGCCTCCTCAGCCAACGCAACCTCCACAG...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCCTGTGGAGGTTGCGTTaGCTGAGGAGGCTGTGCTAT +
Preference number: 4 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLLWRLR*LRRLCY
Trigger: ATAGCACAGCCTCCTCAGCCAACGCAACCTCCACAG...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CAA 72 bp CCTTCTACTTTCACATTGGATGCTGAGATCCTGGGGTaGGAGAGGGGGCAAAGATCATGTCCTAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: PSTFTLDAEILG*ERGQRSCPKQL
Trigger: AAGCTGTTTAGGACATGATCTTTGCCCCCTCTCCAACCCCAGGATCTCAGCATCCAATGTGAAAGTAGAAGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR TCA 90 bp AAATTCGTAACCTATTATGGAAATAGGAGACAGGGATGTTCTCTGGAAGATCAAATGCTGGTGGCCACCTaGGCCGTGGTGACACTGGTG +
Preference number: 4 (lower is better)
Translates to: KFVTYYGNRRQGCSLEDQMLVAT*AVVTLV
Trigger: CACCAGTGTCACCACGGCTCAGGTGGCCACCAGCAT...TTGATCTTCCAGAGAACATCCCTGTCTCCTATTTCCATAATAGGTTACGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR TCA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCCGCTGCTGCTCCGGCTaGCTGGCGTATGGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFRCCSG*LAYGCS
Trigger: TGAGCAGCCATACGCCAGTCAGCCGGAGCAGCAGCG...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp GGCTTAAGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTTTCATAGGTGTTAACTaGAGAGGGTTTGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: GLRKLYAEETFGCCGGCVFIGVN*RGFVRA
Trigger: TGCCCTGACAAACCCTCTTCAGTTAACACCTATGAA...AACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTTAAGCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
CDS-3UTR GCA 90 bp TACCACATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCAGGACACGTCCTCCGTaGGCGACTCGTCCGGGTCGT +
Preference number: 4 (lower is better)
Translates to: YHIISNEGHEGKSLGLYSRTRPP*ATRPGR
Trigger: ACGACCCGGACGAGTCGCGCACGGAGGACGTGTCCT...GGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAATGTGGTA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR GCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTAGGACACGTCCTCCGTaGGCGACTCGTCCGGGTCGT +
Preference number: 4 (lower is better)
Translates to: STIRVLDKNMRYESGSKIRTRPP*ATRPGR
Trigger: ACGACCCGGACGAGTCGCGCACGGAGGACGTGTCCT...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp AAATTCGTAACCTATTATGGAAATAGGAGACAGGGATGTTCTCTGGAAGATCAACTGGCAGCTGACCACTaGCACCCATCTGCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: KFVTYYGNRRQGCSLEDQLAADH*HPSAAE
Trigger: CTCCGCAGCAGATGGGTGGCAGTGGTCAGCTGCCAG...TTGATCTTCCAGAGAACATCCCTGTCTCCTATTTCCATAATAGGTTACGAATTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR GCA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTCTAGTATCGTCAACTTaGCCGACTAAAGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFLVSST*PTKGWV
Trigger: GACCCAGCCTTTAGTCGGGCAAGTTGACGATACTAG...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAAGAGGAGACATTCGGCTaGTGTGGAGGTTGCGTTGGC +
Preference number: 4 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQEETFG*CGGCVG
Trigger: GCCAACGCAACCTCCACAGCAGCCGAATGTCTCCTC...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCCAACAAATGCCCGGGTaGTATCTGAGGCTGGGGATA +
Preference number: 4 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLQQMPG*YLRLGI
Trigger: TATCCCCAGCCTCAGATACCACCCGGGCATTTGTTG...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCACCACCAGGCACGGCTaGCAGCTGACCACTGCCACC +
Preference number: 4 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFTTRHG*QLTTAT
Trigger: GGTGGCAGTGGTCAGCTGCCAGCCGTGCCTGGTGGT...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTAAGTGCTACCAGGATTaGCCTGTTGGGCTGGGAGTT +
Preference number: 4 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTKCYQD*PVGLGV
Trigger: AACTCCCAGCCCAACAGGCCAATCCTGGTAGCACTT...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCATGCTGGTGGCCACCTaGGCCGTGGTGACACTGGTG +
Preference number: 4 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFMLVAT*AVVTLV
Trigger: CACCAGTGTCACCACGGCTCAGGTGGCCACCAGCAT...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp TGTACACACATAGTTATTTGCAGAAGTACACTATACAGTATTGTGTATGGCATGTCTCGGTGTCCTCGGTaGTGCTGGTGGCCACCTGAG +
Preference number: 4 (lower is better)
Translates to: CTHIVICRSTLYSIVYGMSRCPR*CWWPPE
Trigger: CTCAGGTGGCCACCAGCATCACCGAGGACACCGAGA...CATGCCATACACAATACTGTATAGTGTACTTCTGCAAATAACTATGTGTGTACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR TCA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAAGGAGGTTGCGTTGGCTaGGGAGGCTGTGCTATCATT +
Preference number: 4 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQGGCVG*GGCAII
Trigger: AATGATAGCACAGCCTCCTCAGCCAACGCAACCTCC...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTCTGGCAGCTGACCACTaGCACCCATCTGCTGCGGAG +
Preference number: 4 (lower is better)
Translates to: STIRVLDKNMRYESGSKILAADH*HPSAAE
Trigger: CTCCGCAGCAGATGGGTGGCAGTGGTCAGCTGCCAG...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTCTAGTATCGTCAACTTaGCCGACTAAAGGCTGGGTC +
Preference number: 4 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTLVSST*PTKGWV
Trigger: GACCCAGCCTTTAGTCGGGCAAGTTGACGATACTAG...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTGTTTGTCAGGGCATCTaGAACTGGAGGCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTVCQGI*NWRLHN
Trigger: GTTGTGAAGCCTCCAGTTGCAGATGCCCTGACAAAC...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp AACGTGACAGGAAGGCTCAAGGTACATCCATGGGTGGTAAGAAACATGGGAGAGAGGCTGTGCTATCATTaGTTGTTGTTGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: NVTGRLKVHPWVVRNMGERLCYH*LLLRSA
Trigger: AGCACTTCTCAACAACAAGCAATGATAGCACAGCCT...CTCTCCCATGTTTCTTACCACCCATGGATGTACCTTGAGCCTTCCTGTCACGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp CTGGCCTTTCACCTTTCAACAGAATCACTGAAGAGAAATGAAACACATCCATCAAACGCGAACTACAAGTaGCAGGGGGCTGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: LAFHLSTESLKRNETHPSNANYK*QGAEME
Trigger: CTCCATCTCAGCCCCCTGCCACTTGTAGTTCGCGTT...TGATGGATGTGTTTCATTTCTCTTCAGTGATTCTGTTGAAAGGTGAAAGGCCAG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTGGCTCCCCGCTCCCGTaGTCTAGTTTGATCACGCGG +
Preference number: 4 (lower is better)
Translates to: STIRVLDKNMRYESGSKIGSPLP*SSLITR
Trigger: CCGCGTGATCAAACTAGACCACGGGAGCGGGGAGCC...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp AAATTCGTAACCTATTATGGAAATAGGAGACAGGGATGTTCTCTGGAAGATCAATGGGCGAGAGTGGGCTaGCTCATTTTCTCCGACGGG +
Preference number: 4 (lower is better)
Translates to: KFVTYYGNRRQGCSLEDQWARVG*LIFSDG
Trigger: CCCGTCGGAGAAAATGAGCCAGCCCACTCTCGCCCA...TTGATCTTCCAGAGAACATCCCTGTCTCCTATTTCCATAATAGGTTACGAATTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp TACCACATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCGCGGCTGGGCGAGAGTaGGCTGGCTCATTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: YHIISNEGHEGKSLGLYSAAGRE*AGSFSP
Trigger: CGGAGAAAATGAGCCAGCCCACTCTCGCCCAGCCGC...GGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAATGTGGTA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCCTGAAACTCTGCGGCTaGGCGAGAGTGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFLKLCG*ARVGWL
Trigger: GAGCCAGCCCACTCTCGCCCAGCCGCAGAGTTTCAG...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTCTGAAACTCTGCGGCTaGGCGAGAGTGGGCTGGCTC +
Preference number: 4 (lower is better)
Translates to: STIRVLDKNMRYESGSKILKLCG*ARVGWL
Trigger: GAGCCAGCCCACTCTCGCCCAGCCGCAGAGTTTCAG...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTACCCCAGAGGAAAGCTaGCCGCGGAAGCAGAGGTGG +
Preference number: 4 (lower is better)
Translates to: STIRVLDKNMRYESGSKITPEES*PRKQRW
Trigger: CCACCTCTGCTTCCGCGGCCAGCTTTCCTCTGGGGT...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp ACTCTTAAGGTGTATTTGCAAACTGGAGTCAGAATCCATACTATCTCTTCAGGAAAGGAGGAGACGCTCTaGCCAGACCCCAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: TLKVYLQTGVRIHTISSGKEETL*PDPRGK
Trigger: CTTTCCTCTGGGGTCTGGCCAGAGCGTCTCCTCCTT...TCCTGAAGAGATAGTATGGATTCTGACTCCAGTTTGCAAATACACCTTAAGAGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTGCTGCTCCGGCTGACTaGCGTATGGCTGCTCAGCTG +
Preference number: 4 (lower is better)
Translates to: STIRVLDKNMRYESGSKIAAPAD*RMAAQL
Trigger: CAGCTGAGCAGCCATACGCCAGTCAGCCGGAGCAGC...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp ACTCTTAAGGTGTATTTGCAAACTGGAGTCAGAATCCATACTATCTCTTCAGGAGACATTCGGCTGCTGTaGAGGTTGCGTTGGCTGAGG +
Preference number: 4 (lower is better)
Translates to: TLKVYLQTGVRIHTISSGDIRLL*RLRWLR
Trigger: CCTCAGCCAACGCAACCTCCACAGCAGCCGAATGTC...TCCTGAAGAGATAGTATGGATTCTGACTCCAGTTTGCAAATACACCTTAAGAGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CAA 72 bp TGCATGACATCTGAGAGGGAAGCTCCTGTAGAACGATaGTCTAATACTGAAAAGGCCAAGCACACAGCCGAA +
Preference number: 4 (lower is better)
Translates to: CMTSEREAPVER*SNTEKAKHTAE
Trigger: TTCGGCTGTGTGCTTGGCCTTTTCAGTATTAGACAATCGTTCTACAGGAGCTTCCCTCTCAGATGTCATGCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAAGCACTGTGTGTGCCTTaGGCTAAGGGTGAACCAACT +
Preference number: 4 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQALCVP*AKGEPT
Trigger: AGTTGGTTCACCCTTAGCTCAAGGCACACACAGTGC...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTGCTTACTTTCAGCAATaGGAGAAAGTGGTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFAYFQQ*EKVVLE
Trigger: CTCAAGCACCACTTTCTCTCATTGCTGAAAGTAAGC...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTTTCATAGGTGTTAACTaGAGAGGGTTTGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFFIGVN*RGFVRA
Trigger: TGCCCTGACAAACCCTCTTCAGTTAACACCTATGAA...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
46% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp TATTTTGTTGTCAATGGCTACAACACCGCCCCCAGATGCACAATTTATGACCTGATCCCAGAGGCTCTTTaGTTCCTGACACGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: YFVVNGYNTAPRCTIYDLIPEAL*FLTRVQ
Trigger: TTGAACACGTGTCAGGAATCAAAGAGCCTCTGGGAT...CAGGTCATAAATTGTGCATCTGGGGGCGGTGTTGTAGCCATTGACAACAAAATA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
CDS-3UTR GCA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCGAAGCGGCTGCCAGCTaGCCATCCAGGATGAGGTTC +
Preference number: 4 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFEAAAS*PSRMRF
Trigger: GAACCTCATCCTGGATGGGCAGCTGGCAGCCGCTTC...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTCTCTGGCCGGATGGCTaGATCGGCAACAAATGCCCG +
Preference number: 4 (lower is better)
Translates to: STIRVLDKNMRYESGSKILWPDG*IGNKCP
Trigger: CGGGCATTTGTTGCCGATGCAGCCATCCGGCCAGAG...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCTGGCTGAGGAGGCTGTaGTATCATTGCTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLWLRRL*YHCLLL
Trigger: CAACAACAAGCAATGATAGCACAGCCTCCTCAGCCA...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAACAACAAATGCCCGGGTaGTATCTGAGGCTGGGGATA +
Preference number: 4 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQQQMPG*YLRLGI
Trigger: TATCCCCAGCCTCAGATACCACCCGGGCATTTGTTG...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTCTATTTTGTTGTCAATaGCTACAACACCGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTLFCCQ*LQHRPQ
Trigger: CTGGGGGCGGTGTTGTAGCCATTGACAACAAAATAG...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CAA 72 bp GGCTCACTTCATTTTTGTTTCTGTACAACTGGTGCATaGTACACTAGCTCAGCTCCACCATACGACCTGTTC +
Preference number: 4 (lower is better)
Translates to: GSLHFCFCTTGA*YTSSAPPYDLF
Trigger: GAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGTTGTACAGAAACAAAAATGAAGTGAGCC
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CAA 72 bp ATACTATCTCTTCAGGAAGCAAGAGGCTGGAAAGGTTaGGAATTATGGTGGCCAGTCACCTGGAGGAAGATT +
Preference number: 4 (lower is better)
Translates to: ILSLQEARGWKG*ELWWPVTWRKI
Trigger: AATCTTCCTCCAGGTGACTGGCCACCATAATTCCAAACCTTTCCAGCCTCTTGCTTCCTGAAGAGATAGTAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR GCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTTGGAACGGGTACCGCTaGAGGCACGTTTGGAACTCC +
Preference number: 4 (lower is better)
Translates to: STIRVLDKNMRYESGSKIWNGYR*RHVWNS
Trigger: GGAGTTCCAAACGTGCCTGCAGCGGTACCCGTTCCA...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp CTTACCACTTACCTAGCATACAGCCTTGTATTTATCTCAGAGTTCTCAGTCCTAGTTTGTCAGGGCATCTaGAACTGGAGGCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: LTTYLAYSLVFISEFSVLVCQGI*NWRLHN
Trigger: GTTGTGAAGCCTCCAGTTGCAGATGCCCTGACAAAC...TAGGACTGAGAACTCTGAGATAAATACAAGGCTGTATGCTAGGTAAGTGGTAAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR GCA 90 bp TCCTTAGAAGCTAGAATAACCCTCCAACCATGTGAGGGCATCACAACTTTTAAAGTTTGTCAGGGCATCTaGAACTGGAGGCTTCACAAC +
Preference number: 4 (lower is better)
Translates to: SLEARITLQPCEGITTFKVCQGI*NWRLHN
Trigger: GTTGTGAAGCCTCCAGTTGCAGATGCCCTGACAAAC...TTTAAAAGTTGTGATGCCCTCACATGGTTGGAGGGTTATTCTAGCTTCTAAGGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
CDS-3UTR GCA 90 bp ATCTCAGAGTTCTCAGTCCTACTGGAGATTCATTTTTGGCATCAGGTACCTGAGCTTGTTGTTGAGAAGTaGTACCAGGATTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: ISEFSVLLEIHFWHQVPELVVEK*YQDWPV
Trigger: AACAGGCCAATCCTGGTAGCACTTCTCAACAACAAG...CTCAGGTACCTGATGCCAAAAATGAATCTCCAGTAGGACTGAGAACTCTGAGAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR GCA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTAGGCTGTGCTATCATTaGTTGTTGTTGAGAAGTGCT +
Preference number: 4 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFRLCYH*LLLRSA
Trigger: AGCACTTCTCAACAACAAGCAATGATAGCACAGCCT...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTTCCCTGGAGCTGGGTTaGCTGAACGGCTGCTGTCAT +
Preference number: 4 (lower is better)
Translates to: STIRVLDKNMRYESGSKISLELG*LNGCCH
Trigger: ATGACAGCAGCCGTTCAGCCAACCCAGCTCCAGGGA...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCAAGGAGGAGACGCTCTaGCCAGACCCCAGAGGAAAG +
Preference number: 4 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFKEETL*PDPRGK
Trigger: CTTTCCTCTGGGGTCTGGCCAGAGCGTCTCCTCCTT...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp TGTACACACATAGTTATTTGCAGAAGTACACTATACAGTATTGTGTATGGCATGCCAGGATTGGCCTGTTaGGCTGGGAGTTGGGACAAC +
Preference number: 4 (lower is better)
Translates to: CTHIVICRSTLYSIVYGMPGLAC*AGSWDN
Trigger: GTTGTCCCAACTCCCAGCCCAACAGGCCAATCCTGG...CATGCCATACACAATACTGTATAGTGTACTTCTGCAAATAACTATGTGTGTACA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CAA 72 bp TTAAGTGCCAGGCATCAAACAAAATCTTGTGCATTCTaGGGCAGCCATCTGCCATTTAACTGTCTCCTTCTG +
Preference number: 4 (lower is better)
Translates to: LSARHQTKSCAF*GSHLPFNCLLL
Trigger: CAGAAGGAGACAGTTAAATGGCAGATGGCTGCCCAAGAATGCACAAGATTTTGTTTGATGCCTGGCACTTAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CAA 72 bp AGGCCTGTGTATGCTTTCAGAGCTTTGAGTAGGCTTTaGTGTTTAGAACACACCTTTCCTCTTAGGACCTTC +
Preference number: 4 (lower is better)
Translates to: RPVYAFRALSRL*CLEHTFPLRTF
Trigger: GAAGGTCCTAAGAGGAAAGGTGTGTTCTAAACACAAAAGCCTACTCAAAGCTCTGAAAGCATACACAGGCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR TCA 90 bp CTGGCCTTTCACCTTTCAACAGAATCACTGAAGAGAAATGAAACACATCCATCAATCCCAGAGGCTCTTTaGTTCCTGACACGTGTTCAA +
Preference number: 4 (lower is better)
Translates to: LAFHLSTESLKRNETHPSIPEAL*FLTRVQ
Trigger: TTGAACACGTGTCAGGAATCAAAGAGCCTCTGGGAT...TGATGGATGTGTTTCATTTCTCTTCAGTGATTCTGTTGAAAGGTGAAAGGCCAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR TCA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCGGGAGTTGGGACAACTaGTCATTGTTTGAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLGSWDN*SLFERD
Trigger: ATCTCTTTCAAACAATGATCAGTTGTCCCAACTCCC...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTATCATTGCTTGTTGTTaGGAAGTGCTACCAGGATTG +
Preference number: 4 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTIIACC*EVLPGL
Trigger: CAATCCTGGTAGCACTTCTCAACAACAAGCAATGAT...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR GCA 90 bp TACCACATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCAACACCGCCCCCAGATaGACTATCCCAGAGGCTCTT +
Preference number: 4 (lower is better)
Translates to: YHIISNEGHEGKSLGLYSNTAPR*TIPEAL
Trigger: AAGAGCCTCTGGGATAGTGCATCTGGGGGCGGTGTT...GGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAATGTGGTA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTAACGCGAACTACAAGTaGCAGGGGGCTGAGATGGAG +
Preference number: 4 (lower is better)
Translates to: STIRVLDKNMRYESGSKINANYK*QGAEME
Trigger: CTCCATCTCAGCCCCCTGCCACTTGTAGTTCGCGTT...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp ATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCAACAGCCTCACTCTGGCCGGATaGCTGCATCGGCAACAAATG +
Preference number: 4 (lower is better)
Translates to: IISNEGHEGKSLGLYSNSLTLAG*LHRQQM
Trigger: CATTTGTTGCCGATGCAGCCATCCGGCCAGAGTGAG...GCTGTTGGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAAAGGCGCGGGTACATTTaGCATAGTAACAGAAGTGGT +
Preference number: 4 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQRRGYI*HSNRSG
Trigger: ACCACTTCTGTTACTATGCCAAATGTACCCGCGCCT...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CCA 90 bp AAATTCGTAACCTATTATGGAAATAGGAGACAGGGATGTTCTCTGGAAGATCAACAGGGCATCTGCAACTaGAGGCTTCACAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: KFVTYYGNRRQGCSLEDQQGICN*RLHNRL
Trigger: AAGCCTGTTGTGAAGCCTCCAGTTGCAGATGCCCTG...TTGATCTTCCAGAGAACATCCCTGTCTCCTATTTCCATAATAGGTTACGAATTT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CAA 72 bp TCTGTGCTTCTTAGGCCTGTGTATGCTTTCAGAGCTTaGAGTAGGCTTTTGTGTTTAGAACACACCTTTCCT +
Preference number: 4 (lower is better)
Translates to: SVLLRPVYAFRA*SRLLCLEHTFP
Trigger: AGGAAAGGTGTGTTCTAAACACAAAAGCCTACTCAAAGCTCTGAAAGCATACACAGGCCTAAGAAGCACAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR TCA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCGCACTGTGTGTGCCTTaGGCTAAGGGTGAACCAACT +
Preference number: 4 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFALCVP*AKGEPT
Trigger: AGTTGGTTCACCCTTAGCTCAAGGCACACACAGTGC...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp CTTACCACTTACCTAGCATACAGCCTTGTATTTATCTCAGAGTTCTCAGTCCTAAGAGAAAGTGGTGCTTaGGGTAGGGGTTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: LTTYLAYSLVFISEFSVLRESGA*GRGSDF
Trigger: AAAATCAGAACCCCTACCTCAAGCACCACTTTCTCT...TAGGACTGAGAACTCTGAGATAAATACAAGGCTGTATGCTAGGTAAGTGGTAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR GCA 90 bp ATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCAACAGCTCCCGCTCCGCAGTCTaGTCCAAAGTATTGCTGTGT +
Preference number: 4 (lower is better)
Translates to: IISNEGHEGKSLGLYSNSSRSAV*SKVLLC
Trigger: ACACAGCAATACTTTGGAGCAGACTGCGGAGCGGGA...GCTGTTGGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTCAGGGCATCTGCAACTaGAGGCTTCACAACAGGCTT +
Preference number: 4 (lower is better)
Translates to: STIRVLDKNMRYESGSKIQGICN*RLHNRL
Trigger: AAGCCTGTTGTGAAGCCTCCAGTTGCAGATGCCCTG...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CAA 72 bp CCAAATTCCTGTTTGCCCCACTCTTCGGTCAGATTCTaGCAATTCCTTCGACAGGAAACAAAGACTTTAATT +
Preference number: 4 (lower is better)
Translates to: PNSCLPHSSVRF*QFLRQETKTLI
Trigger: AATTAAAGTCTTTGTTTCCTGTCGAAGGAATTGCAAGAATCTGACCGAAGAGTGGGGCAAACAGGAATTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR GCA 90 bp AAATTCGTAACCTATTATGGAAATAGGAGACAGGGATGTTCTCTGGAAGATCAATGGCTGAGGAGGCTGTaGTATCATTGCTTGTTGTTG +
Preference number: 4 (lower is better)
Translates to: KFVTYYGNRRQGCSLEDQWLRRL*YHCLLL
Trigger: CAACAACAAGCAATGATAGCACAGCCTCCTCAGCCA...TTGATCTTCCAGAGAACATCCCTGTCTCCTATTTCCATAATAGGTTACGAATTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CCA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCCTATTTTGTTGTCAATaGCTACAACACCGCCCCCAG +
Preference number: 4 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFLFCCQ*LQHRPQ
Trigger: CTGGGGGCGGTGTTGTAGCCATTGACAACAAAATAG...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CAA 72 bp AACTTTACTTTCTTCAAAGGGTACACAGTCTCAATATaGCCTGTTGACTTAGCCATCCATTCCTTCTCCACT +
Preference number: 4 (lower is better)
Translates to: NFTFFKGYTVSI*PVDLAIHSFST
Trigger: AGTGGAGAAGGAATGGATGGCTAAGTCAACAGGCAATATTGAGACTGTGTACCCTTTGAAGAAAGTAAAGTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR TCA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCAGAGAAAGTGGTGCTTaGGGTAGGGGTTCTGATTTT +
Preference number: 4 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFRESGA*GRGSDF
Trigger: AAAATCAGAACCCCTACCTCAAGCACCACTTTCTCT...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTGCTTACTTTCAGCAATaGGAGAAAGTGGTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: STIRVLDKNMRYESGSKIAYFQQ*EKVVLE
Trigger: CTCAAGCACCACTTTCTCTCATTGCTGAAAGTAAGC...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp TACCACATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCTTCATAGGTGTTAACTaGAGAGGGTTTGTCAGGGCA +
Preference number: 4 (lower is better)
Translates to: YHIISNEGHEGKSLGLYSFIGVN*RGFVRA
Trigger: TGCCCTGACAAACCCTCTTCAGTTAACACCTATGAA...GGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAATGTGGTA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR GCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTCTTGTTGTTGAGAAGTaGTACCAGGATTGGCCTGTT +
Preference number: 4 (lower is better)
Translates to: STIRVLDKNMRYESGSKILVVEK*YQDWPV
Trigger: AACAGGCCAATCCTGGTAGCACTTCTCAACAACAAG...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CAA 72 bp TCCAGTTTTTACCCACCACTCTACCAAAGAACTGAATaGAGATTCTCCCACTATCATCCAATGAATCATTCT +
Preference number: 4 (lower is better)
Translates to: SSFYPPLYQRTE*RFSHYHPMNHS
Trigger: AGAATGATTCATTGGATGATAGTGGGAGAATCTCAATTCAGTTCTTTGGTAGAGTGGTGGGTAAAAACTGGA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
3UTR CAA 72 bp TTGCAAGATGACAGAAACTATCATCTGGAAGACATTTaGAATTGCAGTGGGCAAGAGCACTTTGTGGTTATT +
Preference number: 4 (lower is better)
Translates to: LQDDRNYHLEDI*NCSGQEHFVVI
Trigger: AATAACCACAAAGTGCTCTTGCCCACTGCAATTCAAAATGTCTTCCAGATGATAGTTTCTGTCATCTTGCAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR TCA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTGGGAGTTGGGACAACTaGTCATTGTTTGAAAGAGAT +
Preference number: 4 (lower is better)
Translates to: STIRVLDKNMRYESGSKIGSWDN*SLFERD
Trigger: ATCTCTTTCAAACAATGATCAGTTGTCCCAACTCCC...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR TCA 90 bp ATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCAACAGCATCATTGCTTGTTGTTaGGAAGTGCTACCAGGATTG +
Preference number: 4 (lower is better)
Translates to: IISNEGHEGKSLGLYSNSIIACC*EVLPGL
Trigger: CAATCCTGGTAGCACTTCTCAACAACAAGCAATGAT...GCTGTTGGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAAT
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR GCA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAATTTCACCAGATCCATTaGTTGTTCTATTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQFHQIH*LFYFVV
Trigger: GACAACAAAATAGAACAAGCAATGGATCTGGTGAAA...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
3UTR CAA 72 bp TATTTATTATATACGCCAAGTGTGGGAGAGGTTTCCTaGTCTGCAGTCTTCTTTGGGTTTATCTATCAATAT +
Preference number: 4 (lower is better)
Translates to: YLLYTPSVGEVS*SAVFFGFIYQY
Trigger: ATATTGATAGATAAACCCAAAGAAGACTGCAGACAAGGAAACCTCTCCCACACTTGGCGTATATAATAAATA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR GCA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCTTTCACCAGATCCATTaGTTGTTCTATTTTGTTGTC +
Preference number: 4 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFFHQIH*LFYFVV
Trigger: GACAACAAAATAGAACAAGCAATGGATCTGGTGAAA...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
34% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 90 bp CGGCCCGGTCGCCGCTCCCGGGAACGGCGGCAGCGACGCCGAACTTaGAGCCACAGCCCCACCTACGGGCGGTGGAGGCTGCGGCTGCCC +
Preference number: 5 (lower is better)
Translates to: RPGRRSRERRQRRRT*SHSPTYGRWRLRLP
Trigger: GGGCAGCCGCAGCCTCCACCGCCCGTAGGTGGGGCTGTGGCTCCAAGTTCGGCGTCGCTGCCGCCGTTCCCGGGAGCGGCGACCGGGCCG
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 90 bp GGCCACGGCTCCCTGGAGCTGGGTTGGCTGAACGGCTGCTGTCATTaGCTGCGGCCCGGTCGCCGCTCCCGGGAACGGCGGCAGCGACGC +
Preference number: 5 (lower is better)
Translates to: GHGSLELGWLNGCCH*LRPGRRSRERRQRR
Trigger: GCGTCGCTGCCGCCGTTCCCGGGAGCGGCGACCGGGCCGCAGCCAATGACAGCAGCCGTTCAGCCAACCCAGCTCCAGGGAGCCGTGGCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS TCA 90 bp GGCTGCACCACGCCTCCTAGAGCAGCTGGGGCCACTCCGGCCGGCTaGCAAGGAGCGGCCTGGCCTACAGGAACCGGACCCGGGGCCACA +
Preference number: 5 (lower is better)
Translates to: GCTTPPRAAGATPAG*QGAAWPTGTGPGAT
Trigger: TGTGGCCCCGGGTCCGGTTCCTGTAGGCCAGGCCGCTCCTTGTCAGCCGGCCGGAGTGGCCCCAGCTGCTCTAGGAGGCGTGGTGCAGCC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 90 bp CTGGCCGCGGAAGCAGAGGTGGCGCTAGCGCTGGTAGACAAGGGCTaGGCAGGGCTTGGCGGCTGCAGGGCCACGTGCGGCGGCAGGTAC +
Preference number: 5 (lower is better)
Translates to: LAAEAEVALALVDKG*AGLGGCRATCGGRY
Trigger: GTACCTGCCGCCGCACGTGGCCCTGCAGCCGCCAAGCCCTGCGCAGCCCTTGTCTACCAGCGCTAGCGCCACCTCTGCTTCCGCGGCCAG
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 90 bp CGGCAGCGACGCCGAACTTGGAGCCACAGCCCCACCTACGGGCGGTaGAGGCTGCGGCTGCCCGACGCTGAAACTCTGCGGCTGGGCGAG +
Preference number: 5 (lower is better)
Translates to: RQRRRTWSHSPTYGR*RLRLPDAETLRLGE
Trigger: CTCGCCCAGCCGCAGAGTTTCAGCGTCGGGCAGCCGCAGCCTCCACCGCCCGTAGGTGGGGCTGTGGCTCCAAGTTCGGCGTCGCTGCCG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 90 bp GACGCCGAACTTGGAGCCACAGCCCCACCTACGGGCGGTGGAGGCTaGGGCTGCCCGACGCTGAAACTCTGCGGCTGGGCGAGAGTGGGC +
Preference number: 5 (lower is better)
Translates to: DAELGATAPPTGGGG*GCPTLKLCGWARVG
Trigger: GCCCACTCTCGCCCAGCCGCAGAGTTTCAGCGTCGGGCAGCCGCAGCCTCCACCGCCCGTAGGTGGGGCTGTGGCTCCAAGTTCGGCGTC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 90 bp GTGGCGCTAGCGCTGGTAGACAAGGGCTGCGCAGGGCTTGGCGGCTaGAGGGCCACGTGCGGCGGCAGGTACTCACTCTGGCCGGATGGC +
Preference number: 5 (lower is better)
Translates to: VALALVDKGCAGLGG*RATCGGRYSLWPDG
Trigger: GCCATCCGGCCAGAGTGAGTACCTGCCGCCGCACGTGGCCCTGCAGCCGCCAAGCCCTGCGCAGCCCTTGTCTACCAGCGCTAGCGCCAC
71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 90 bp GCAGTCAAGGAGCTGTCAGTTCCCGAGTCCAGCCCGTGCGCCCCCTaGATGGAGGCCACCACCACCACCACCGACCCTCCGGTGGCTCCC +
Preference number: 5 (lower is better)
Translates to: AVKELSVPESSPCAP*MEATTTTTDPPVAP
Trigger: GGGAGCCACCGGAGGGTCGGTGGTGGTGGTGGTGGCCTCCATGCAGGGGGCGCACGGGCTGGACTCGGGAACTGACAGCTCCTTGACTGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 90 bp GAACTTGGAGCCACAGCCCCACCTACGGGCGGTGGAGGCTGCGGCTaGCCGACGCTGAAACTCTGCGGCTGGGCGAGAGTGGGCTGGCTC +
Preference number: 5 (lower is better)
Translates to: ELGATAPPTGGGGCG*PTLKLCGWARVGWL
Trigger: GAGCCAGCCCACTCTCGCCCAGCCGCAGAGTTTCAGCGTCGGGCAGCCGCAGCCTCCACCGCCCGTAGGTGGGGCTGTGGCTCCAAGTTC
70% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 90 bp AAGTGGCAGGGGGCTGAGATGGAGTTGCACTACTCGGCCCAGGAGTaGACACCGAAGCGGCGGCCGCCGCCAGGGTCTGGGCGAGTGCCC +
Preference number: 5 (lower is better)
Translates to: KWQGAEMELHYSAQE*TPKRRPPPGSGRVP
Trigger: GGGCACTCGCCCAGACCCTGGCGGCGGCCGCCGCTTCGGTGTCCACTCCTGGGCCGAGTAGTGCAACTCCATCTCAGCCCCCTGCCACTT
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 90 bp GCGCCCCCTGCATGGAGGCCACCACCACCACCACCGACCCTCCGGTaGCTCCCAGGCCGCTGTCCCGCTCCGCAGTCTGCTCCAAAGTAT +
Preference number: 5 (lower is better)
Translates to: APPAWRPPPPPPTLR*LPGRCPAPQSAPKY
Trigger: ATACTTTGGAGCAGACTGCGGAGCGGGACAGCGGCCTGGGAGCCACCGGAGGGTCGGTGGTGGTGGTGGTGGCCTCCATGCAGGGGGCGC
70% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 90 bp AGCAGAGGTGGCGCTAGCGCTGGTAGACAAGGGCTGCGCAGGGCTTaGCGGCTGCAGGGCCACGTGCGGCGGCAGGTACTCACTCTGGCC +
Preference number: 5 (lower is better)
Translates to: SRGGASAGRQGLRRA*RLQGHVRRQVLTLA
Trigger: GGCCAGAGTGAGTACCTGCCGCCGCACGTGGCCCTGCAGCCGCCAAGCCCTGCGCAGCCCTTGTCTACCAGCGCTAGCGCCACCTCTGCT
70% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS TCA 90 bp CCACAGCCCCACCTACGGGCGGTGGAGGCTGCGGCTGCCCGACGCTaGAACTCTGCGGCTGGGCGAGAGTGGGCTGGCTCATTTTCTCCG +
Preference number: 5 (lower is better)
Translates to: PQPHLRAVEAAAARR*NSAAGREWAGSFSP
Trigger: CGGAGAAAATGAGCCAGCCCACTCTCGCCCAGCCGCAGAGTTTCAGCGTCGGGCAGCCGCAGCCTCCACCGCCCGTAGGTGGGGCTGTGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 90 bp CCACCTACGGGCGGTGGAGGCTGCGGCTGCCCGACGCTGAAACTCTaGGGCTGGGCGAGAGTGGGCTGGCTCATTTTCTCCGACGGGGGT +
Preference number: 5 (lower is better)
Translates to: PPTGGGGCGCPTLKL*GWARVGWLIFSDGG
Trigger: ACCCCCGTCGGAGAAAATGAGCCAGCCCACTCTCGCCCAGCCGCAGAGTTTCAGCGTCGGGCAGCCGCAGCCTCCACCGCCCGTAGGTGG
69% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS TCA 90 bp CGTTGGCGGGCGCAGCTGAAGCGGCTGCCAGCTGCCCATCCAGGATaGGGTTCGGGGACACGGTCCCGGGAGTTTCCGCATCCCCGACAT +
Preference number: 5 (lower is better)
Translates to: RWRAQLKRLPAAHPG*GSGTRSREFPHPRH
Trigger: ATGTCGGGGATGCGGAAACTCCCGGGACCGTGTCCCCGAACCTCATCCTGGATGGGCAGCTGGCAGCCGCTTCAGCTGCGCCCGCCAACG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 90 bp ACGGGCGGTGGAGGCTGCGGCTGCCCGACGCTGAAACTCTGCGGCTaGGCGAGAGTGGGCTGGCTCATTTTCTCCGACGGGGGTAGCTGT +
Preference number: 5 (lower is better)
Translates to: TGGGGCGCPTLKLCG*ARVGWLIFSDGGSC
Trigger: ACAGCTACCCCCGTCGGAGAAAATGAGCCAGCCCACTCTCGCCCAGCCGCAGAGTTTCAGCGTCGGGCAGCCGCAGCCTCCACCGCCCGT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 90 bp CGGCTGCAGGGCCACGTGCGGCGGCAGGTACTCACTCTGGCCGGATaGCTGCATCGGCAACAAATGCCCGGGTGGTATCTGAGGCTGGGG +
Preference number: 5 (lower is better)
Translates to: RLQGHVRRQVLTLAG*LHRQQMPGWYLRLG
Trigger: CCCCAGCCTCAGATACCACCCGGGCATTTGTTGCCGATGCAGCCATCCGGCCAGAGTGAGTACCTGCCGCCGCACGTGGCCCTGCAGCCG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 90 bp CACGCGGAAACGCGAACTACAAGTGGCAGGGGGCTGAGATGGAGTTaGACTACTCGGCCCAGGAGTGGACACCGAAGCGGCGGCCGCCGC +
Preference number: 5 (lower is better)
Translates to: HAETRTTSGRGLRWS*TTRPRSGHRSGGRR
Trigger: GCGGCGGCCGCCGCTTCGGTGTCCACTCCTGGGCCGAGTAGTGCAACTCCATCTCAGCCCCCTGCCACTTGTAGTTCGCGTTTCCGCGTG
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 90 bp GGGCACACTAGGCACGCTTGGAACGGGTACCGCTGCAGGCACGTTTaGAACTCCGGGCACCACGGTGTGAGGACCACCAGGCACGGCTGG +
Preference number: 5 (lower is better)
Translates to: GHTRHAWNGYRCRHV*NSGHHGVRTTRHGW
Trigger: CCAGCCGTGCCTGGTGGTCCTCACACCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCGGTACCCGTTCCAAGCGTGCCTAGTGTGCCC
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS TCA 90 bp GGTTCGGGGACACGGTCCCGGGAGTTTCCGCATCCCCGACATTGTTaGGCGTCTCTTCCGAGGAGCTACGCTCGCACACCTCCTCCGGGC +
Preference number: 5 (lower is better)
Translates to: GSGTRSREFPHPRHC*ASLPRSYARTPPPG
Trigger: GCCCGGAGGAGGTGTGCGAGCGTAGCTCCTCGGAAGAGACGCTCAACAATGTCGGGGATGCGGAAACTCCCGGGACCGTGTCCCCGAACC
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 90 bp CTTCCGAGGAGCTACGCTCGCACACCTCCTCCGGGCCGTAATCCGTaGCCCGGGAAACGTCGAAGATCTCGGAGGACACGTCCTCCGTGC +
Preference number: 5 (lower is better)
Translates to: LPRSYARTPPPGRNP*PGKRRRSRRTRPPC
Trigger: GCACGGAGGACGTGTCCTCCGAGATCTTCGACGTTTCCCGGGCCACGGATTACGGCCCGGAGGAGGTGTGCGAGCGTAGCTCCTCGGAAG
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS TCA 90 bp TCCATCGGCCGCGCCGGTACGGCTCCCCGCTCCCGTGGTCTAGTTTaGTCACGCGGAAACGCGAACTACAAGTGGCAGGGGGCTGAGATG +
Preference number: 5 (lower is better)
Translates to: SIGRAGTAPRSRGLV*SRGNANYKWQGAEM
Trigger: CATCTCAGCCCCCTGCCACTTGTAGTTCGCGTTTCCGCGTGATCAAACTAGACCACGGGAGCGGGGAGCCGTACCGGCGCGGCCGATGGA
64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 90 bp ACCGACCCTCCGGTGGCTCCCAGGCCGCTGTCCCGCTCCGCAGTCTaGTCCAAAGTATTGCTGTGTCTAATGCAATCCCCGGACCTGGTG +
Preference number: 5 (lower is better)
Translates to: TDPPVAPRPLSRSAV*SKVLLCLMQSPDLV
Trigger: CACCAGGTCCGGGGATTGCATTAGACACAGCAATACTTTGGAGCAGACTGCGGAGCGGGACAGCGGCCTGGGAGCCACCGGAGGGTCGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 90 bp TCCATACACGTCCATCGGCCGCGCCGGTACGGCTCCCCGCTCCCGTaGTCTAGTTTGATCACGCGGAAACGCGAACTACAAGTGGCAGGG +
Preference number: 5 (lower is better)
Translates to: SIHVHRPRRYGSPLP*SSLITRKRELQVAG
Trigger: CCCTGCCACTTGTAGTTCGCGTTTCCGCGTGATCAAACTAGACCACGGGAGCGGGGAGCCGTACCGGCGCGGCCGATGGACGTGTATGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 90 bp TGCGGCTGCCCGACGCTGAAACTCTGCGGCTGGGCGAGAGTGGGCTaGCTCATTTTCTCCGACGGGGGTAGCTGTGACACAGCAGTCAAG +
Preference number: 5 (lower is better)
Translates to: CGCPTLKLCGWARVG*LIFSDGGSCDTAVK
Trigger: CTTGACTGCTGTGTCACAGCTACCCCCGTCGGAGAAAATGAGCCAGCCCACTCTCGCCCAGCCGCAGAGTTTCAGCGTCGGGCAGCCGCA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 90 bp AACAGAAGTGGTGGGCACACTAGGCACGCTTGGAACGGGTACCGCTaGAGGCACGTTTGGAACTCCGGGCACCACGGTGTGAGGACCACC +
Preference number: 5 (lower is better)
Translates to: NRSGGHTRHAWNGYR*RHVWNSGHHGVRTT
Trigger: GGTGGTCCTCACACCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCGGTACCCGTTCCAAGCGTGCCTAGTGTGCCCACCACTTCTGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 90 bp TTTGATCACGCGGAAACGCGAACTACAAGTGGCAGGGGGCTGAGATaGAGTTGCACTACTCGGCCCAGGAGTGGACACCGAAGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: FDHAETRTTSGRGLR*SCTTRPRSGHRSGG
Trigger: GCCGCCGCTTCGGTGTCCACTCCTGGGCCGAGTAGTGCAACTCCATCTCAGCCCCCTGCCACTTGTAGTTCGCGTTTCCGCGTGATCAAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS TCA 90 bp ATGACGCTGCTGCTCCGGCTGACTGGCGTATGGCTGCTCAGCTGCTaGGACTGGCCCAGAGGCGCGGGTACATTTGGCATAGTAACAGAA +
Preference number: 5 (lower is better)
Translates to: MTLLLRLTGVWLLSC*DWPRGAGTFGIVTE
Trigger: TTCTGTTACTATGCCAAATGTACCCGCGCCTCTGGGCCAGTCTCAGCAGCTGAGCAGCCATACGCCAGTCAGCCGGAGCAGCAGCGTCAT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp AACGTGACAGGAAGGCTCAAGGTACATCCATGGGTGGTAAGAAACATGGGAGAGGAACGGCTGCTGTCATaGGCTGCGGCCCGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: NVTGRLKVHPWVVRNMGEERLLS*AAARSP
Trigger: CGGCGACCGGGCCGCAGCCAATGACAGCAGCCGTTC...CTCTCCCATGTTTCTTACCACCCATGGATGTACCTTGAGCCTTCCTGTCACGTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS TCA 90 bp TCTAGTTTGATCACGCGGAAACGCGAACTACAAGTGGCAGGGGGCTaGGATGGAGTTGCACTACTCGGCCCAGGAGTGGACACCGAAGCG +
Preference number: 5 (lower is better)
Translates to: SSLITRKRELQVAGG*DGVALLGPGVDTEA
Trigger: CGCTTCGGTGTCCACTCCTGGGCCGAGTAGTGCAACTCCATCTCAGCCCCCTGCCACTTGTAGTTCGCGTTTCCGCGTGATCAAACTAGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 90 bp ATGGCTGCTCAGCTGCTGAGACTGGCCCAGAGGCGCGGGTACATTTaGCATAGTAACAGAAGTGGTGGGCACACTAGGCACGCTTGGAAC +
Preference number: 5 (lower is better)
Translates to: MAAQLLRLAQRRGYI*HSNRSGGHTRHAWN
Trigger: GTTCCAAGCGTGCCTAGTGTGCCCACCACTTCTGTTACTATGCCAAATGTACCCGCGCCTCTGGGCCAGTCTCAGCAGCTGAGCAGCCAT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp ATCTCAGAGTTCTCAGTCCTACTGGAGATTCATTTTTGGCATCAGGTACCTGAGCCACCGCCGCCTCCGTaGGCGGGCGCAGCTGAAGCG +
Preference number: 5 (lower is better)
Translates to: ISEFSVLLEIHFWHQVPEPPPPP*AGAAEA
Trigger: CGCTTCAGCTGCGCCCGCCAACGGAGGCGGCGGTGG...CTCAGGTACCTGATGCCAAAAATGAATCTCCAGTAGGACTGAGAACTCTGAGAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS CCA 90 bp TACATTTGGCATAGTAACAGAAGTGGTGGGCACACTAGGCACGCTTaGAACGGGTACCGCTGCAGGCACGTTTGGAACTCCGGGCACCAC +
Preference number: 5 (lower is better)
Translates to: YIWHSNRSGGHTRHA*NGYRCRHVWNSGHH
Trigger: GTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCGGTACCCGTTCCAAGCGTGCCTAGTGTGCCCACCACTTCTGTTACTATGCCAAATGTA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTACAGGCTGCGCCAGGTaGACATTCGGCGGCGGCGGC +
Preference number: 5 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTTGCAR*TFGGGG
Trigger: GCCGCCGCCGCCGAATGTCAACCTGGCGCAGCCTGT...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS TCA 90 bp CTTAGGTCAGACTGTGGTAGACTTGTTGGTGCACTGTGTGTGCCTTaGGCTAAGGGTGAACCAACTTGCTGGATGACGCTGCTGCTCCGG +
Preference number: 5 (lower is better)
Translates to: LRSDCGRLVGALCVP*AKGEPTCWMTLLLR
Trigger: CCGGAGCAGCAGCGTCATCCAGCAAGTTGGTTCACCCTTAGCTCAAGGCACACACAGTGCACCAACAAGTCTACCACAGTCTGACCTAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTCGGCTGCTGTGGAGGTaGCGTTGGCTGAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFRLLWR*RWLRRL
Trigger: CAGCCTCCTCAGCCAACGCAACCTCCACAGCAGCCG...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCGCAGCGACGCCGAACTaGGAGCCACAGCCCCACCTA +
Preference number: 5 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLAATPN*EPQPHL
Trigger: TAGGTGGGGCTGTGGCTCCAAGTTCGGCGTCGCTGC...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp ACTCTTAAGGTGTATTTGCAAACTGGAGTCAGAATCCATACTATCTCTTCAGGAGAACGGCTGCTGTCATaGGCTGCGGCCCGGTCGCCG +
Preference number: 5 (lower is better)
Translates to: TLKVYLQTGVRIHTISSGERLLS*AAARSP
Trigger: CGGCGACCGGGCCGCAGCCAATGACAGCAGCCGTTC...TCCTGAAGAGATAGTATGGATTCTGACTCCAGTTTGCAAATACACCTTAAGAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CAA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTGCTGTGGAGGTTGCGTaGGCTGAGGAGGCTGTGCTA +
Preference number: 5 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFAVEVA*AEEAVL
Trigger: TAGCACAGCCTCCTCAGCCAACGCAACCTCCACAGC...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTACCAGGATTGGCCTGTaGGGCTGGGAGTTGGGACAA +
Preference number: 5 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFTRIGL*GWELGQ
Trigger: TTGTCCCAACTCCCAGCCCAACAGGCCAATCCTGGT...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTGCTGTGGAGGTTGCGTaGGCTGAGGAGGCTGTGCTA +
Preference number: 5 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTAVEVA*AEEAVL
Trigger: TAGCACAGCCTCCTCAGCCAACGCAACCTCCACAGC...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTGCATCCCCGACATTGTaGAGCGTCTCTTCCGAGGAG +
Preference number: 5 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTASPTL*SVSSEE
Trigger: CTCCTCGGAAGAGACGCTCAACAATGTCGGGGATGC...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCTCCGCATCCCCGACATaGTTGAGCGTCTCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLSASPT*LSVSSE
Trigger: CTCGGAAGAGACGCTCAACAATGTCGGGGATGCGGA...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp TTCAGGAAGCAAGAGGCTGGAAAGGTTTGGAATTATGGTGGCCAGTCACCTGGACTGTTGGGCTGGGAGTaGGGACAACTGATCATTGTT +
Preference number: 5 (lower is better)
Translates to: FRKQEAGKVWNYGGQSPGLLGWE*GQLIIV
Trigger: AACAATGATCAGTTGTCCCAACTCCCAGCCCAACAG...TCCAGGTGACTGGCCACCATAATTCCAAACCTTTCCAGCCTCTTGCTTCCTGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CAA 90 bp AACGTGACAGGAAGGCTCAAGGTACATCCATGGGTGGTAAGAAACATGGGAGAGCTGTTGGGCTGGGAGTaGGGACAACTGATCATTGTT +
Preference number: 5 (lower is better)
Translates to: NVTGRLKVHPWVVRNMGELLGWE*GQLIIV
Trigger: AACAATGATCAGTTGTCCCAACTCCCAGCCCAACAG...CTCTCCCATGTTTCTTACCACCCATGGATGTACCTTGAGCCTTCCTGTCACGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp ACTCTTAAGGTGTATTTGCAAACTGGAGTCAGAATCCATACTATCTCTTCAGGACGGCTGCTGTGGAGGTaGCGTTGGCTGAGGAGGCTG +
Preference number: 5 (lower is better)
Translates to: TLKVYLQTGVRIHTISSGRLLWR*RWLRRL
Trigger: CAGCCTCCTCAGCCAACGCAACCTCCACAGCAGCCG...TCCTGAAGAGATAGTATGGATTCTGACTCCAGTTTGCAAATACACCTTAAGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS TCA 90 bp GCTATGCTGAATACAGAGGTGGCCAGACTGTTCATAGGTGTTAACTaGAGAGGGTTTGTCAGGGCATCTGCAACTGGAGGCTTCACAACA +
Preference number: 5 (lower is better)
Translates to: AMLNTEVARLFIGVN*RGFVRASATGGFTT
Trigger: TGTTGTGAAGCCTCCAGTTGCAGATGCCCTGACAAACCCTCTTCAGTTAACACCTATGAACAGTCTGGCCACCTCTGTATTCAGCATAGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099090.7
ENSMUST00000196049.2
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp ATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCAACAGCCCGCTGCAGGCACGTTaGGAACTCCGGGCACCACGG +
Preference number: 5 (lower is better)
Translates to: IISNEGHEGKSLGLYSNSPLQAR*ELRAPR
Trigger: CCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCGG...GCTGTTGGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CAA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTCCGCTGCAGGCACGTTaGGAACTCCGGGCACCACGG +
Preference number: 5 (lower is better)
Translates to: STIRVLDKNMRYESGSKIPLQAR*ELRAPR
Trigger: CCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCGG...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp CTATCATTGCTTGTTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGCTGGGATTAACTGAAGAGGGTTaGTCAGGGCATCTGCAACTG +
Preference number: 5 (lower is better)
Translates to: LSLLVVEKCYQDWPVGLGLTEEG*SGHLQL
Trigger: CAGTTGCAGATGCCCTGACAAACCCTCTTCAGTTAA...TCCCAGCCCAACAGGCCAATCCTGGTAGCACTTCTCAACAACAAGCAATGATAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
CDS-3UTR CAA 90 bp GGCTTAAGAAAGCTTTATGCTGAGGAGACATTCGGCTGCTGTGGAGGTTGCGTTTATCCCAGAGGCTCTTaGATTCCTGACACGTGTTCA +
Preference number: 5 (lower is better)
Translates to: GLRKLYAEETFGCCGGCVYPRGS*IPDTCS
Trigger: TGAACACGTGTCAGGAATCAAAGAGCCTCTGGGATA...AACGCAACCTCCACAGCAGCCGAATGTCTCCTCAGCATAAAGCTTTCTTAAGCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
CDS-3UTR CAA 90 bp GTGCTTCTTAGGCCTGTGTATGCTTTCAGAGCTTTGAGTAGGCTTTTGTGTTTACTCCCGTGGTCTAGTTaGATCACGCGGAAACGCGAA +
Preference number: 5 (lower is better)
Translates to: VLLRPVYAFRALSRLLCLLPWSS*ITRKRE
Trigger: TTCGCGTTTCCGCGTGATCAAACTAGACCACGGGAG...TAAACACAAAAGCCTACTCAAAGCTCTGAAAGCATACACAGGCCTAAGAAGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CAA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTGCAGCGACGCCGAACTaGGAGCCACAGCCCCACCTA +
Preference number: 5 (lower is better)
Translates to: STIRVLDKNMRYESGSKIAATPN*EPQPHL
Trigger: TAGGTGGGGCTGTGGCTCCAAGTTCGGCGTCGCTGC...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp CTTACCACTTACCTAGCATACAGCCTTGTATTTATCTCAGAGTTCTCAGTCCTAACCAGGATTGGCCTGTaGGGCTGGGAGTTGGGACAA +
Preference number: 5 (lower is better)
Translates to: LTTYLAYSLVFISEFSVLTRIGL*GWELGQ
Trigger: TTGTCCCAACTCCCAGCCCAACAGGCCAATCCTGGT...TAGGACTGAGAACTCTGAGATAAATACAAGGCTGTATGCTAGGTAAGTGGTAAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS TCA 90 bp GGCTTCACAACAGGCTTACTTTCAGCAATGAGAGAAAGTGGTGCTTaGGGTAGGGGTTCTGATTTTCTTCTAGTATCGTCAACTTGCCCG +
Preference number: 5 (lower is better)
Translates to: GFTTGLLSAMRESGA*GRGSDFLLVSSTCP
Trigger: CGGGCAAGTTGACGATACTAGAAGAAAATCAGAACCCCTACCTCAAGCACCACTTTCTCTCATTGCTGAAAGTAAGCCTGTTGTGAAGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTTTAACTGAAGAGGGTTaGTCAGGGCATCTGCAACTG +
Preference number: 5 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFLTEEG*SGHLQL
Trigger: CAGTTGCAGATGCCCTGACAAACCCTCTTCAGTTAA...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
47% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp CTATCATTGCTTGTTGTTGAGAAGTGCTACCAGGATTGGCCTGTTGGGCTGGGACTTGGTAGAAAGCAGTaGAAGGATTCCTGTCTTCAT +
Preference number: 5 (lower is better)
Translates to: LSLLVVEKCYQDWPVGLGLGRKQ*KDSCLH
Trigger: ATGAAGACAGGAATCCTTCAACTGCTTTCTACCAAG...TCCCAGCCCAACAGGCCAATCCTGGTAGCACTTCTCAACAACAAGCAATGATAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000196049.2
CDS-3UTR CAA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCTTAACTGAAGAGGGTTaGTCAGGGCATCTGCAACTG +
Preference number: 5 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLLTEEG*SGHLQL
Trigger: CAGTTGCAGATGCCCTGACAAACCCTCTTCAGTTAA...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTCTGTGCTATCATTGCTaGTTGTTGAGAAGTGCTACC +
Preference number: 5 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFLCYHC*LLRSAT
Trigger: GGTAGCACTTCTCAACAACAAGCAATGATAGCACAG...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp TACCACATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCGCATCCCCGACATTGTaGAGCGTCTCTTCCGAGGAG +
Preference number: 5 (lower is better)
Translates to: YHIISNEGHEGKSLGLYSASPTL*SVSSEE
Trigger: CTCCTCGGAAGAGACGCTCAACAATGTCGGGGATGC...GGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAATGTGGTA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CAA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTTCCGCATCCCCGACATaGTTGAGCGTCTCTTCCGAG +
Preference number: 5 (lower is better)
Translates to: STIRVLDKNMRYESGSKISASPT*LSVSSE
Trigger: CTCGGAAGAGACGCTCAACAATGTCGGGGATGCGGA...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp CAAAGATTACAGGCCATGCAGATCATGCTAGACAGCAAAGAAAATTGTGACCAAACTGTGGTAGACTTGTaGGTGCACTGTGTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: QRLQAMQIMLDSKENCDQTVVDL*VHCVCL
Trigger: AAGGCACACACAGTGCACCAACAAGTCTACCACAGT...TTGGTCACAATTTTCTTTGCTGTCTAGCATGATCTGCATGGCCTGTAATCTTTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp ACTGGTGCATTGTACACTAGCTCAGCTCCACCATACGACCTGTTCGTTCTTTTTGCTTGTTCTATTTTGTaGTCAATGGCTACAACACCG +
Preference number: 5 (lower is better)
Translates to: TGALYTSSAPPYDLFVLFACSIL*SMATTP
Trigger: CGGTGTTGTAGCCATTGACAACAAAATAGAACAAGC...AAAAAGAACGAACAGGTCGTATGGTGGAGCTGAGCTAGTGTACAATGCACCAGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTCTCCCGTGGTCTAGTTaGATCACGCGGAAACGCGAA +
Preference number: 5 (lower is better)
Translates to: STIRVLDKNMRYESGSKILPWSS*ITRKRE
Trigger: TTCGCGTTTCCGCGTGATCAAACTAGACCACGGGAG...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTCTTGGTAGAAAGCAGTaGAAGGATTCCTGTCTTCAT +
Preference number: 5 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTLGRKQ*KDSCLH
Trigger: ATGAAGACAGGAATCCTTCAACTGCTTTCTACCAAG...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CAA 90 bp AGTACAATAAGAGTGCTGGATAAAAACATGAGGTACGAAAGTGGTTCAAAGATTCAGACTGTGGTAGACTaGTTGGTGCACTGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: STIRVLDKNMRYESGSKIQTVVD*LVHCVC
Trigger: GCACACACAGTGCACCAACAAGTCTACCACAGTCTG...AATCTTTGAACCACTTTCGTACCTCATGTTTTTATCCAGCACTCTTATTGTACT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCCAGACTGTGGTAGACTaGTTGGTGCACTGTGTGTGC +
Preference number: 5 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFQTVVD*LVHCVC
Trigger: GCACACACAGTGCACCAACAAGTCTACCACAGTCTG...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp TACCACATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCACTGTGGTAGACTTGTaGGTGCACTGTGTGTGCCTT +
Preference number: 5 (lower is better)
Translates to: YHIISNEGHEGKSLGLYSTVVDL*VHCVCL
Trigger: AAGGCACACACAGTGCACCAACAAGTCTACCACAGT...GGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAATGTGGTA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CAA 90 bp CCACCAAAACTTTTAAAGATCCCACTCATGGGCACATGTAGAATGCAGACTCTCCACCAGATCCATTGCTaGTTCTATTTTGTTGTCAAT +
Preference number: 5 (lower is better)
Translates to: PPKLLKIPLMGTCRMQTLHQIHC*FYFVVN
Trigger: ATTGACAACAAAATAGAACAAGCAATGGATCTGGTG...GAGAGTCTGCATTCTACATGTGCCCATGAGTGGGATCTTTAAAAGTTTTGGTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp TCCATGGGTGGTAAGAAACATGGGAGAGCCACCAAAACTTTTAAAGATCCCACTCACCAGATCCATTGCTaGTTCTATTTTGTTGTCAAT +
Preference number: 5 (lower is better)
Translates to: SMGGKKHGRATKTFKDPTHQIHC*FYFVVN
Trigger: ATTGACAACAAAATAGAACAAGCAATGGATCTGGTG...AGTGGGATCTTTAAAAGTTTTGGTGGCTCTCCCATGTTTCTTACCACCCATGGA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp ACTCTTAAGGTGTATTTGCAAACTGGAGTCAGAATCCATACTATCTCTTCAGGACTGTGCTATCATTGCTaGTTGTTGAGAAGTGCTACC +
Preference number: 5 (lower is better)
Translates to: TLKVYLQTGVRIHTISSGLCYHC*LLRSAT
Trigger: GGTAGCACTTCTCAACAACAAGCAATGATAGCACAG...TCCTGAAGAGATAGTATGGATTCTGACTCCAGTTTGCAAATACACCTTAAGAGT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CAA 90 bp ATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCAACAGCTATCCCAGAGGCTCTTaGATTCCTGACACGTGTTCA +
Preference number: 5 (lower is better)
Translates to: IISNEGHEGKSLGLYSNSYPRGS*IPDTCS
Trigger: TGAACACGTGTCAGGAATCAAAGAGCCTCTGGGATA...GCTGTTGGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAAT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CAA 90 bp AAATTCGTAACCTATTATGGAAATAGGAGACAGGGATGTTCTCTGGAAGATCAATGCTATCATTGCTTGTaGTTGAGAAGTGCTACCAGG +
Preference number: 5 (lower is better)
Translates to: KFVTYYGNRRQGCSLEDQCYHCL*LRSATR
Trigger: CCTGGTAGCACTTCTCAACAACAAGCAATGATAGCA...TTGATCTTCCAGAGAACATCCCTGTCTCCTATTTCCATAATAGGTTACGAATTT
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS-3UTR CAA 90 bp AAACTCCATTACACAGCTTTGCTTCTTTGGTTACAAAGTAGGTTGAACAATTTCTGCTATCATTGCTTGTaGTTGAGAAGTGCTACCAGG +
Preference number: 5 (lower is better)
Translates to: KLHYTALLLWLQSRLNNFCYHCL*LRSATR
Trigger: CCTGGTAGCACTTCTCAACAACAAGCAATGATAGCA...GAAATTGTTCAACCTACTTTGTAACCAAAGAAGCAAAGCTGTGTAATGGAGTTT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS-3UTR CAA 90 bp TACCACATTATTAGCAATGAAGGGCATGAAGGGAAATCTTTAGGTTTATATTCCGCTTGTTCTATTTTGTaGTCAATGGCTACAACACCG +
Preference number: 5 (lower is better)
Translates to: YHIISNEGHEGKSLGLYSACSIL*SMATTP
Trigger: CGGTGTTGTAGCCATTGACAACAAAATAGAACAAGC...GGAATATAAACCTAAAGATTTCCCTTCATGCCCTTCATTGCTAATAATGTGGTA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS CAA 90 bp GCGGCCCGGTCGCCGCTCCCGGGAACGGCGGCAGCGACGCCGAACTaGGAGCCACAGCCCCACCTACGGGCGGTGGAGGCTGCGGCTGCC +
Preference number: 6 (lower is better)
Translates to: AARSPLPGTAAATPN*EPQPHLRAVEAAAA
Trigger: GGCAGCCGCAGCCTCCACCGCCCGTAGGTGGGGCTGTGGCTCCAAGTTCGGCGTCGCTGCCGCCGTTCCCGGGAGCGGCGACCGGGCCGC
78% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp CCACGCTCCGGGCCGACACGCCACCGCCGCCTCCGTTaGCGGGCGCAGCTGAAGCGGCTGCCAGCTGCCCAT +
Preference number: 6 (lower is better)
Translates to: PRSGPTRHRRLR*RAQLKRLPAAH
Trigger: ATGGGCAGCTGGCAGCCGCTTCAGCTGCGCCCGCCAACGGAGGCGGCGGTGGCGTGTCGGCCCGGAGCGTGG
76% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp CGCCGCTCCCGGGAACGGCGGCAGCGACGCCGAACTTaGAGCCACAGCCCCACCTACGGGCGGTGGAGGCTG +
Preference number: 6 (lower is better)
Translates to: RRSRERRQRRRT*SHSPTYGRWRL
Trigger: CAGCCTCCACCGCCCGTAGGTGGGGCTGTGGCTCCAAGTTCGGCGTCGCTGCCGCCGTTCCCGGGAGCGGCG
75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CAA 90 bp CGGCCACGGCTCCCTGGAGCTGGGTTGGCTGAACGGCTGCTGTCATaGGCTGCGGCCCGGTCGCCGCTCCCGGGAACGGCGGCAGCGACG +
Preference number: 6 (lower is better)
Translates to: RPRLPGAGLAERLLS*AAARSPLPGTAAAT
Trigger: CGTCGCTGCCGCCGTTCCCGGGAGCGGCGACCGGGCCGCAGCCAATGACAGCAGCCGTTCAGCCAACCCAGCTCCAGGGAGCCGTGGCCG
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS TCA 72 bp GCGCCTCCGGCCACGGCTCCCTGGAGCTGGGTTGGCTaGACGGCTGCTGTCATTGGCTGCGGCCCGGTCGCC +
Preference number: 6 (lower is better)
Translates to: APPATAPWSWVG*TAAVIGCGPVA
Trigger: GGCGACCGGGCCGCAGCCAATGACAGCAGCCGTTCAGCCAACCCAGCTCCAGGGAGCCGTGGCCGGAGGCGC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CAA 72 bp TCGCCGCTCCCGGGAACGGCGGCAGCGACGCCGAACTaGGAGCCACAGCCCCACCTACGGGCGGTGGAGGCT +
Preference number: 6 (lower is better)
Translates to: SPLPGTAAATPN*EPQPHLRAVEA
Trigger: AGCCTCCACCGCCCGTAGGTGGGGCTGTGGCTCCAAGTTCGGCGTCGCTGCCGCCGTTCCCGGGAGCGGCGA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CAA 72 bp GGAGGGCGCCTCCGGCCACGGCTCCCTGGAGCTGGGTaGGCTGAACGGCTGCTGTCATTGGCTGCGGCCCGG +
Preference number: 6 (lower is better)
Translates to: GGRLRPRLPGAG*AERLLSLAAAR
Trigger: CCGGGCCGCAGCCAATGACAGCAGCCGTTCAGCCAACCCAGCTCCAGGGAGCCGTGGCCGGAGGCGCCCTCC
74% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 72 bp GCCACAGCCCCACCTACGGGCGGTGGAGGCTGCGGCTaGCCGACGCTGAAACTCTGCGGCTGGGCGAGAGTG +
Preference number: 6 (lower is better)
Translates to: ATAPPTGGGGCG*PTLKLCGWARV
Trigger: CACTCTCGCCCAGCCGCAGAGTTTCAGCGTCGGGCAGCCGCAGCCTCCACCGCCCGTAGGTGGGGCTGTGGC
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 72 bp CTTGGAGCCACAGCCCCACCTACGGGCGGTGGAGGCTaGGGCTGCCCGACGCTGAAACTCTGCGGCTGGGCG +
Preference number: 6 (lower is better)
Translates to: LGATAPPTGGGG*GCPTLKLCGWA
Trigger: CGCCCAGCCGCAGAGTTTCAGCGTCGGGCAGCCGCAGCCTCCACCGCCCGTAGGTGGGGCTGTGGCTCCAAG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 72 bp CCACCCATCTGCTGCGGAGGCTGCACGGGCTGGGGCTaGCCAACCCCAGTAAGCCCGGAGCCTGGCTGCACC +
Preference number: 6 (lower is better)
Translates to: PPICCGGCTGWG*PTPVSPEPGCT
Trigger: GGTGCAGCCAGGCTCCGGGCTTACTGGGGTTGGGCAGCCCCAGCCCGTGCAGCCTCCGCAGCAGATGGGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp GCATGGAGGCCACCACCACCACCACCGACCCTCCGGTaGCTCCCAGGCCGCTGTCCCGCTCCGCAGTCTGCT +
Preference number: 6 (lower is better)
Translates to: AWRPPPPPPTLR*LPGRCPAPQSA
Trigger: AGCAGACTGCGGAGCGGGACAGCGGCCTGGGAGCCACCGGAGGGTCGGTGGTGGTGGTGGTGGCCTCCATGC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp GGCGCTAGCGCTGGTAGACAAGGGCTGCGCAGGGCTTaGCGGCTGCAGGGCCACGTGCGGCGGCAGGTACTC +
Preference number: 6 (lower is better)
Translates to: GASAGRQGLRRA*RLQGHVRRQVL
Trigger: GAGTACCTGCCGCCGCACGTGGCCCTGCAGCCGCCAAGCCCTGCGCAGCCCTTGTCTACCAGCGCTAGCGCC
72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp CCACTGCCACCCATCTGCTGCGGAGGCTGCACGGGCTaGGGCTGCCCAACCCCAGTAAGCCCGGAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: PLPPICCGGCTG*GCPTPVSPEPG
Trigger: GCCAGGCTCCGGGCTTACTGGGGTTGGGCAGCCCCAGCCCGTGCAGCCTCCGCAGCAGATGGGTGGCAGTGG
72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 72 bp CCTCCGTTGGCGGGCGCAGCTGAAGCGGCTGCCAGCTaGCCATCCAGGATGAGGTTCGGGGACACGGTCCCG +
Preference number: 6 (lower is better)
Translates to: PPLAGAAEAAAS*PSRMRFGDTVP
Trigger: CGGGACCGTGTCCCCGAACCTCATCCTGGATGGGCAGCTGGCAGCCGCTTCAGCTGCGCCCGCCAACGGAGG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 72 bp GAGCTGTCAGTTCCCGAGTCCAGCCCGTGCGCCCCCTaGATGGAGGCCACCACCACCACCACCGACCCTCCG +
Preference number: 6 (lower is better)
Translates to: ELSVPESSPCAP*MEATTTTTDPP
Trigger: CGGAGGGTCGGTGGTGGTGGTGGTGGCCTCCATGCAGGGGGCGCACGGGCTGGACTCGGGAACTGACAGCTC
71% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp GGGGCTGAGATGGAGTTGCACTACTCGGCCCAGGAGTaGACACCGAAGCGGCGGCCGCCGCCAGGGTCTGGG +
Preference number: 6 (lower is better)
Translates to: GAEMELHYSAQE*TPKRRPPPGSG
Trigger: CCCAGACCCTGGCGGCGGCCGCCGCTTCGGTGTCCACTCCTGGGCCGAGTAGTGCAACTCCATCTCAGCCCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp CGCCGAACTTGGAGCCACAGCCCCACCTACGGGCGGTaGAGGCTGCGGCTGCCCGACGCTGAAACTCTGCGG +
Preference number: 6 (lower is better)
Translates to: RRTWSHSPTYGR*RLRLPDAETLR
Trigger: CCGCAGAGTTTCAGCGTCGGGCAGCCGCAGCCTCCACCGCCCGTAGGTGGGGCTGTGGCTCCAAGTTCGGCG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp GGCCTACAGGAACCGGACCCGGGGCCACAGCTTCACTaGGCTGGGCGGAGGCGCCCATCATCTGGGCACCCA +
Preference number: 6 (lower is better)
Translates to: GLQEPDPGPQLH*AGRRRPSSGHP
Trigger: TGGGTGCCCAGATGATGGGCGCCTCCGCCCAGCCCAGTGAAGCTGTGGCCCCGGGTCCGGTTCCTGTAGGCC
71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 72 bp GGCGGTGGAGGCTGCGGCTGCCCGACGCTGAAACTCTaGGGCTGGGCGAGAGTGGGCTGGCTCATTTTCTCC +
Preference number: 6 (lower is better)
Translates to: GGGGCGCPTLKL*GWARVGWLIFS
Trigger: GGAGAAAATGAGCCAGCCCACTCTCGCCCAGCCGCAGAGTTTCAGCGTCGGGCAGCCGCAGCCTCCACCGCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp GGAGGCTGCGGCTGCCCGACGCTGAAACTCTGCGGCTaGGCGAGAGTGGGCTGGCTCATTTTCTCCGACGGG +
Preference number: 6 (lower is better)
Translates to: GGCGCPTLKLCG*ARVGWLIFSDG
Trigger: CCCGTCGGAGAAAATGAGCCAGCCCACTCTCGCCCAGCCGCAGAGTTTCAGCGTCGGGCAGCCGCAGCCTCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp GGCTGCAGGGCCACGTGCGGCGGCAGGTACTCACTCTaGCCGGATGGCTGCATCGGCAACAAATGCCCGGGT +
Preference number: 6 (lower is better)
Translates to: GCRATCGGRYSL*PDGCIGNKCPG
Trigger: ACCCGGGCATTTGTTGCCGATGCAGCCATCCGGCCAGAGTGAGTACCTGCCGCCGCACGTGGCCCTGCAGCC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS TCA 72 bp GCGCAGCTGAAGCGGCTGCCAGCTGCCCATCCAGGATaGGGTTCGGGGACACGGTCCCGGGAGTTTCCGCAT +
Preference number: 6 (lower is better)
Translates to: AQLKRLPAAHPG*GSGTRSREFPH
Trigger: ATGCGGAAACTCCCGGGACCGTGTCCCCGAACCTCATCCTGGATGGGCAGCTGGCAGCCGCTTCAGCTGCGC
67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CAA 90 bp TCACGCGGAAACGCGAACTACAAGTGGCAGGGGGCTGAGATGGAGTaGCACTACTCGGCCCAGGAGTGGACACCGAAGCGGCGGCCGCCG +
Preference number: 6 (lower is better)
Translates to: SRGNANYKWQGAEME*HYSAQEWTPKRRPP
Trigger: CGGCGGCCGCCGCTTCGGTGTCCACTCCTGGGCCGAGTAGTGCAACTCCATCTCAGCCCCCTGCCACTTGTAGTTCGCGTTTCCGCGTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS TCA 72 bp CGCGCCGGTACGGCTCCCCGCTCCCGTGGTCTAGTTTaGTCACGCGGAAACGCGAACTACAAGTGGCAGGGG +
Preference number: 6 (lower is better)
Translates to: RAGTAPRSRGLV*SRGNANYKWQG
Trigger: CCCCTGCCACTTGTAGTTCGCGTTTCCGCGTGATCAAACTAGACCACGGGAGCGGGGAGCCGTACCGGCGCG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 72 bp GGGAAACGTCGAAGATCTCGGAGGACACGTCCTCCGTaGGCGACTCGTCCGGGTCGTCCAGGCTCTCGGTGT +
Preference number: 6 (lower is better)
Translates to: GKRRRSRRTRPP*ATRPGRPGSRC
Trigger: ACACCGAGAGCCTGGACGACCCGGACGAGTCGCGCACGGAGGACGTGTCCTCCGAGATCTTCGACGTTTCCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 72 bp GGTGGGCACACTAGGCACGCTTGGAACGGGTACCGCTaGAGGCACGTTTGGAACTCCGGGCACCACGGTGTG +
Preference number: 6 (lower is better)
Translates to: GGHTRHAWNGYR*RHVWNSGHHGV
Trigger: CACACCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCGGTACCCGTTCCAAGCGTGCCTAGTGTGCCCACC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp GGCCACGTGCGGCGGCAGGTACTCACTCTGGCCGGATaGCTGCATCGGCAACAAATGCCCGGGTGGTATCTG +
Preference number: 6 (lower is better)
Translates to: GHVRRQVLTLAG*LHRQQMPGWYL
Trigger: CAGATACCACCCGGGCATTTGTTGCCGATGCAGCCATCCGGCCAGAGTGAGTACCTGCCGCCGCACGTGGCC
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp AGGCACGCTTGGAACGGGTACCGCTGCAGGCACGTTTaGAACTCCGGGCACCACGGTGTGAGGACCACCAGG +
Preference number: 6 (lower is better)
Translates to: RHAWNGYRCRHV*NSGHHGVRTTR
Trigger: CCTGGTGGTCCTCACACCGTGGTGCCCGGAGTTCCAAACGTGCCTGCAGCGGTACCCGTTCCAAGCGTGCCT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CAA 72 bp CCGCGCCGGTACGGCTCCCCGCTCCCGTGGTCTAGTTaGATCACGCGGAAACGCGAACTACAAGTGGCAGGG +
Preference number: 6 (lower is better)
Translates to: PRRYGSPLPWSS*ITRKRELQVAG
Trigger: CCCTGCCACTTGTAGTTCGCGTTTCCGCGTGATCAAACTAGACCACGGGAGCGGGGAGCCGTACCGGCGCGG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CAA 90 bp AGGTTCGGGGACACGGTCCCGGGAGTTTCCGCATCCCCGACATTGTaGAGCGTCTCTTCCGAGGAGCTACGCTCGCACACCTCCTCCGGG +
Preference number: 6 (lower is better)
Translates to: RFGDTVPGVSASPTL*SVSSEELRSHTSSG
Trigger: CCCGGAGGAGGTGTGCGAGCGTAGCTCCTCGGAAGAGACGCTCAACAATGTCGGGGATGCGGAAACTCCCGGGACCGTGTCCCCGAACCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp AGCTACGCTCGCACACCTCCTCCGGGCCGTAATCCGTaGCCCGGGAAACGTCGAAGATCTCGGAGGACACGT +
Preference number: 6 (lower is better)
Translates to: SYARTPPPGRNP*PGKRRRSRRTR
Trigger: ACGTGTCCTCCGAGATCTTCGACGTTTCCCGGGCCACGGATTACGGCCCGGAGGAGGTGTGCGAGCGTAGCT
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp GTCCATCGGCCGCGCCGGTACGGCTCCCCGCTCCCGTaGTCTAGTTTGATCACGCGGAAACGCGAACTACAA +
Preference number: 6 (lower is better)
Translates to: VHRPRRYGSPLP*SSLITRKRELQ
Trigger: TTGTAGTTCGCGTTTCCGCGTGATCAAACTAGACCACGGGAGCGGGGAGCCGTACCGGCGCGGCCGATGGAC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CAA 72 bp GGGGACACGGTCCCGGGAGTTTCCGCATCCCCGACATaGTTGAGCGTCTCTTCCGAGGAGCTACGCTCGCAC +
Preference number: 6 (lower is better)
Translates to: GDTVPGVSASPT*LSVSSEELRSH
Trigger: GTGCGAGCGTAGCTCCTCGGAAGAGACGCTCAACAATGTCGGGGATGCGGAAACTCCCGGGACCGTGTCCCC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CAA 90 bp ATGAGGTTCGGGGACACGGTCCCGGGAGTTTCCGCATCCCCGACATaGTTGAGCGTCTCTTCCGAGGAGCTACGCTCGCACACCTCCTCC +
Preference number: 6 (lower is better)
Translates to: MRFGDTVPGVSASPT*LSVSSEELRSHTSS
Trigger: GGAGGAGGTGTGCGAGCGTAGCTCCTCGGAAGAGACGCTCAACAATGTCGGGGATGCGGAAACTCCCGGGACCGTGTCCCCGAACCTCAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS TCA 72 bp CTGCTCCGGCTGACTGGCGTATGGCTGCTCAGCTGCTaGGACTGGCCCAGAGGCGCGGGTACATTTGGCATA +
Preference number: 6 (lower is better)
Translates to: LLRLTGVWLLSC*DWPRGAGTFGI
Trigger: TATGCCAAATGTACCCGCGCCTCTGGGCCAGTCTCAGCAGCTGAGCAGCCATACGCCAGTCAGCCGGAGCAG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 72 bp ACGCGAACTACAAGTGGCAGGGGGCTGAGATGGAGTTaGACTACTCGGCCCAGGAGTGGACACCGAAGCGGC +
Preference number: 6 (lower is better)
Translates to: TRTTSGRGLRWS*TTRPRSGHRSG
Trigger: GCCGCTTCGGTGTCCACTCCTGGGCCGAGTAGTGCAACTCCATCTCAGCCCCCTGCCACTTGTAGTTCGCGT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS GCA 72 bp CCGGTGGCTCCCAGGCCGCTGTCCCGCTCCGCAGTCTaGTCCAAAGTATTGCTGTGTCTAATGCAATCCCCG +
Preference number: 6 (lower is better)
Translates to: PVAPRPLSRSAV*SKVLLCLMQSP
Trigger: CGGGGATTGCATTAGACACAGCAATACTTTGGAGCAGACTGCGGAGCGGGACAGCGGCCTGGGAGCCACCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp CCGACGCTGAAACTCTGCGGCTGGGCGAGAGTGGGCTaGCTCATTTTCTCCGACGGGGGTAGCTGTGACACA +
Preference number: 6 (lower is better)
Translates to: PTLKLCGWARVG*LIFSDGGSCDT
Trigger: TGTGTCACAGCTACCCCCGTCGGAGAAAATGAGCCAGCCCACTCTCGCCCAGCCGCAGAGTTTCAGCGTCGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CAA 72 bp GACACGGTCCCGGGAGTTTCCGCATCCCCGACATTGTaGAGCGTCTCTTCCGAGGAGCTACGCTCGCACACC +
Preference number: 6 (lower is better)
Translates to: DTVPGVSASPTL*SVSSEELRSHT
Trigger: GGTGTGCGAGCGTAGCTCCTCGGAAGAGACGCTCAACAATGTCGGGGATGCGGAAACTCCCGGGACCGTGTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CAA 90 bp GTGGCTCCCAGGCCGCTGTCCCGCTCCGCAGTCTGCTCCAAAGTATaGCTGTGTCTAATGCAATCCCCGGACCTGGTGAGGACGCTGCTA +
Preference number: 6 (lower is better)
Translates to: VAPRPLSRSAVCSKV*LCLMQSPDLVRTLL
Trigger: TAGCAGCGTCCTCACCAGGTCCGGGGATTGCATTAGACACAGCAATACTTTGGAGCAGACTGCGGAGCGGGACAGCGGCCTGGGAGCCAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS TCA 72 bp ACACGGTCCCGGGAGTTTCCGCATCCCCGACATTGTTaGGCGTCTCTTCCGAGGAGCTACGCTCGCACACCT +
Preference number: 6 (lower is better)
Translates to: TRSREFPHPRHC*ASLPRSYARTP
Trigger: AGGTGTGCGAGCGTAGCTCCTCGGAAGAGACGCTCAACAATGTCGGGGATGCGGAAACTCCCGGGACCGTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp GCGGAAACGCGAACTACAAGTGGCAGGGGGCTGAGATaGAGTTGCACTACTCGGCCCAGGAGTGGACACCGA +
Preference number: 6 (lower is better)
Translates to: AETRTTSGRGLR*SCTTRPRSGHR
Trigger: TCGGTGTCCACTCCTGGGCCGAGTAGTGCAACTCCATCTCAGCCCCCTGCCACTTGTAGTTCGCGTTTCCGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CAA 72 bp AGGCCGCTGTCCCGCTCCGCAGTCTGCTCCAAAGTATaGCTGTGTCTAATGCAATCCCCGGACCTGGTGAGG +
Preference number: 6 (lower is better)
Translates to: RPLSRSAVCSKV*LCLMQSPDLVR
Trigger: CCTCACCAGGTCCGGGGATTGCATTAGACACAGCAATACTTTGGAGCAGACTGCGGAGCGGGACAGCGGCCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp CAGCTGCTGAGACTGGCCCAGAGGCGCGGGTACATTTaGCATAGTAACAGAAGTGGTGGGCACACTAGGCAC +
Preference number: 6 (lower is better)
Translates to: QLLRLAQRRGYI*HSNRSGGHTRH
Trigger: GTGCCTAGTGTGCCCACCACTTCTGTTACTATGCCAAATGTACCCGCGCCTCTGGGCCAGTCTCAGCAGCTG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CCA 72 bp CATAGTAACAGAAGTGGTGGGCACACTAGGCACGCTTaGAACGGGTACCGCTGCAGGCACGTTTGGAACTCC +
Preference number: 6 (lower is better)
Translates to: HSNRSGGHTRHA*NGYRCRHVWNS
Trigger: GGAGTTCCAAACGTGCCTGCAGCGGTACCCGTTCCAAGCGTGCCTAGTGTGCCCACCACTTCTGTTACTATG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS TCA 72 bp GACTGTGGTAGACTTGTTGGTGCACTGTGTGTGCCTTaGGCTAAGGGTGAACCAACTTGCTGGATGACGCTG +
Preference number: 6 (lower is better)
Translates to: DCGRLVGALCVP*AKGEPTCWMTL
Trigger: CAGCGTCATCCAGCAAGTTGGTTCACCCTTAGCTCAAGGCACACACAGTGCACCAACAAGTCTACCACAGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CAA 72 bp CAACACCGCCCCCAGATGCACTATCCCAGAGGCTCTTaGATTCCTGACACGTGTTCAAATGGAACGCTTGGT +
Preference number: 6 (lower is better)
Translates to: QHRPQMHYPRGS*IPDTCSNGTLG
Trigger: ACCAAGCGTTCCATTTGAACACGTGTCAGGAATCAAAGAGCCTCTGGGATAGTGCATCTGGGGGCGGTGTTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS CAA 90 bp GGGTCTGAGTCTGAAACTGGCTTAGGTCAGACTGTGGTAGACTTGTaGGTGCACTGTGTGTGCCTTGAGCTAAGGGTGAACCAACTTGCT +
Preference number: 6 (lower is better)
Translates to: GSESETGLGQTVVDL*VHCVCLELRVNQLA
Trigger: AGCAAGTTGGTTCACCCTTAGCTCAAGGCACACACAGTGCACCAACAAGTCTACCACAGTCTGACCTAAGCCAGTTTCAGACTCAGACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS CAA 90 bp GCTGGGTCTGAGTCTGAAACTGGCTTAGGTCAGACTGTGGTAGACTaGTTGGTGCACTGTGTGTGCCTTGAGCTAAGGGTGAACCAACTT +
Preference number: 6 (lower is better)
Translates to: AGSESETGLGQTVVD*LVHCVCLELRVNQL
Trigger: AAGTTGGTTCACCCTTAGCTCAAGGCACACACAGTGCACCAACAAGTCTACCACAGTCTGACCTAAGCCAGTTTCAGACTCAGACCCAGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2
CDS TCA 72 bp AACACCGCCCCCAGATGCACTATCCCAGAGGCTCTTTaGTTCCTGACACGTGTTCAAATGGAACGCTTGGTA +
Preference number: 6 (lower is better)
Translates to: NTAPRCTIPEAL*FLTRVQMERLV
Trigger: TACCAAGCGTTCCATTTGAACACGTGTCAGGAATCAAAGAGCCTCTGGGATAGTGCATCTGGGGGCGGTGTT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000099090.7
CDS TCA 72 bp AATACAGAGGTGGCCAGACTGTTCATAGGTGTTAACTaGAGAGGGTTTGTCAGGGCATCTGCAACTGGAGGC +
Preference number: 6 (lower is better)
Translates to: NTEVARLFIGVN*RGFVRASATGG
Trigger: GCCTCCAGTTGCAGATGCCCTGACAAACCCTCTTCAGTTAACACCTATGAACAGTCTGGCCACCTCTGTATT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000099090.7
ENSMUST00000196049.2
ENSMUST00000199164.2
CDS CAA 72 bp TCTGAAACTGGCTTAGGTCAGACTGTGGTAGACTTGTaGGTGCACTGTGTGTGCCTTGAGCTAAGGGTGAAC +
Preference number: 6 (lower is better)
Translates to: SETGLGQTVVDL*VHCVCLELRVN
Trigger: GTTCACCCTTAGCTCAAGGCACACACAGTGCACCAACAAGTCTACCACAGTCTGACCTAAGCCAGTTTCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000099090.7
ENSMUST00000199164.2