Pregenerated sensors for TSC22D1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022010Ensembl transcript IDs: ENSMUST00000022587.10, ENSMUST00000048371.15, ENSMUST00000101618.9, ENSMUST00000110888.8, ENSMUST00000133224.2, ENSMUST00000134109.2, ENSMUST00000140251.9, ENSMUST00000142683.8, ENSMUST00000175984.2, ENSMUST00000176581.2, ENSMUST00000176886.2, ENSMUST00000177207.2, ENSMUST00000177471.2
Found 529 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | GGGCCGCTCACAACCTGGGGCCCTTCTCCTTCCCTGGCAGTCGTGTaGGGATGTGGCTTCTCTCCACGCTGGCAGGGGAGAGAGAACGAG | + |
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Preference number: 1 (lower is better) Translates to: GPLTTWGPSPSLAVV*GCGFSPRWQGRENE Trigger: CTCGTTCTCTCTCCCCTGCCAGCGTGGAGAGAAGCCACATCCCCACACGACTGCCAGGGAAGGAGAAGGGCCCCAGGTTGTGAGCGGCCC 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134109.2 |
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| 3UTR TCA 90 bp | ACCAGCAACGAGGAGGCTGGGCCACTGCCTTATCCCGACACGGAGTaGATGGGTCCAGAGCAGGGCCGCTCACAACCTGGGGCCCTTCTC | + |
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Preference number: 1 (lower is better) Translates to: TSNEEAGPLPYPDTE*MGPEQGRSQPGALL Trigger: GAGAAGGGCCCCAGGTTGTGAGCGGCCCTGCTCTGGACCCATTCACTCCGTGTCGGGATAAGGCAGTGGCCCAGCCTCCTCGTTGCTGGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134109.2 |
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| 3UTR CCA 90 bp | CCACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTaGGGAGGGTTGAAAAGGCACAGAGCTCCTCGGGGTCAATTAAAC | + |
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Preference number: 1 (lower is better) Translates to: PRRRAARALRSRVGG*GGLKRHRAPRGQLN Trigger: GTTTAATTGACCCCGAGGAGCTCTGTGCCTTTTCAACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000177207.2 |
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| 3UTR CCA 90 bp | TCTCCTTCCCTGGCAGTCGTGTGGGGATGTGGCTTCTCTCCACGCTaGCAGGGGAGAGAGAACGAGCTAGCGCTGGCATTTCTGACTGTA | + |
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Preference number: 1 (lower is better) Translates to: SPSLAVVWGCGFSPR*QGRENELALAFLTV Trigger: TACAGTCAGAAATGCCAGCGCTAGCTCGTTCTCTCTCCCCTGCCAGCGTGGAGAGAAGCCACATCCCCACACGACTGCCAGGGAAGGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134109.2 |
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| 3UTR TCA 90 bp | GCTGGGTATTCTGTCTCCAAGGGTTCAGTGGAGAAAGTGGAGCCCTaGCGTCAAAAGCTCTCCGTGGTCTTGGCTGTATCTGTGCTGTGG | + |
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Preference number: 1 (lower is better) Translates to: AGYSVSKGSVEKVEP*RQKLSVVLAVSVLW Trigger: CCACAGCACAGATACAGCCAAGACCACGGAGAGCTTTTGACGTCAGGGCTCCACTTTCTCCACTGAACCCTTGGAGACAGAATACCCAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 |
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| 3UTR GCA 90 bp | TGGAGCCCTGACGTCAAAAGCTCTCCGTGGTCTTGGCTGTATCTGTaGTGTGGCTCTAGGATCACTCCTTGTACCTCTGGGAGGAGAGAA | + |
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Preference number: 1 (lower is better) Translates to: WSPDVKSSPWSWLYL*CGSRITPCTSGRRE Trigger: TTCTCTCCTCCCAGAGGTACAAGGAGTGATCCTAGAGCCACAGCACAGATACAGCCAAGACCACGGAGAGCTTTTGACGTCAGGGCTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
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| 3UTR GCA 90 bp | CTATTCCCACCTACGGTTCACTCTGACTGTTCACTACCTCTGCTCTaGATCTCTCAAGAGGCGCAATGCCCACAGTGCAGAGTCAGCCCT | + |
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Preference number: 1 (lower is better) Translates to: LFPPTVHSDCSLPLL*ISQEAQCPQCRVSP Trigger: AGGGCTGACTCTGCACTGTGGGCATTGCGCCTCTTGAGAGATGCAGAGCAGAGGTAGTGAACAGTCAGAGTGAACCGTAGGTGGGAATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
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| 3UTR CCA 90 bp | TCCCACTCTCTCCAGAAGCTGGGTATTCTGTCTCCAAGGGTTCAGTaGAGAAAGTGGAGCCCTGACGTCAAAAGCTCTCCGTGGTCTTGG | + |
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Preference number: 1 (lower is better) Translates to: SHSLQKLGILSPRVQ*RKWSPDVKSSPWSW Trigger: CCAAGACCACGGAGAGCTTTTGACGTCAGGGCTCCACTTTCTCCACTGAACCCTTGGAGACAGAATACCCAGCTTCTGGAGAGAGTGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 |
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| 3UTR GCA 90 bp | TCACTACCTCTGCTCTGCATCTCTCAAGAGGCGCAATGCCCACAGTaGAGAGTCAGCCCTTCAACCCTAACAGGCGTTTACTGCTTAGGA | + |
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Preference number: 1 (lower is better) Translates to: SLPLLCISQEAQCPQ*RVSPSTLTGVYCLG Trigger: TCCTAAGCAGTAAACGCCTGTTAGGGTTGAAGGGCTGACTCTGCACTGTGGGCATTGCGCCTCTTGAGAGATGCAGAGCAGAGGTAGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
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| 3UTR CCA 90 bp | CAGTGGAGAAAGTGGAGCCCTGACGTCAAAAGCTCTCCGTGGTCTTaGCTGTATCTGTGCTGTGGCTCTAGGATCACTCCTTGTACCTCT | + |
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Preference number: 1 (lower is better) Translates to: QWRKWSPDVKSSPWS*LYLCCGSRITPCTS Trigger: AGAGGTACAAGGAGTGATCCTAGAGCCACAGCACAGATACAGCCAAGACCACGGAGAGCTTTTGACGTCAGGGCTCCACTTTCTCCACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
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| 3UTR CCA 90 bp | AGGGTTCAGTGGAGAAAGTGGAGCCCTGACGTCAAAAGCTCTCCGTaGTCTTGGCTGTATCTGTGCTGTGGCTCTAGGATCACTCCTTGT | + |
|
Preference number: 1 (lower is better) Translates to: RVQWRKWSPDVKSSP*SWLYLCCGSRITPC Trigger: ACAAGGAGTGATCCTAGAGCCACAGCACAGATACAGCCAAGACCACGGAGAGCTTTTGACGTCAGGGCTCCACTTTCTCCACTGAACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
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| 3UTR CCA 90 bp | CTCCAGAAGCTGGGTATTCTGTCTCCAAGGGTTCAGTGGAGAAAGTaGAGCCCTGACGTCAAAAGCTCTCCGTGGTCTTGGCTGTATCTG | + |
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Preference number: 1 (lower is better) Translates to: LQKLGILSPRVQWRK*SPDVKSSPWSWLYL Trigger: CAGATACAGCCAAGACCACGGAGAGCTTTTGACGTCAGGGCTCCACTTTCTCCACTGAACCCTTGGAGACAGAATACCCAGCTTCTGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 |
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| 3UTR CCA 90 bp | CAGCCCTTCAACCCTAACAGGCGTTTACTGCTTAGGAACACAGACTaGGCTCCACTGGGCCTCCAAGACAGCTCCATGGCTTTCATCATT | + |
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Preference number: 1 (lower is better) Translates to: QPFNPNRRLLLRNTD*APLGLQDSSMAFII Trigger: AATGATGAAAGCCATGGAGCTGTCTTGGAGGCCCAGTGGAGCCCAGTCTGTGTTCCTAAGCAGTAAACGCCTGTTAGGGTTGAAGGGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
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| 3UTR GCA 90 bp | GAAACCTATTCCCACCTACGGTTCACTCTGACTGTTCACTACCTCTaGTCTGCATCTCTCAAGAGGCGCAATGCCCACAGTGCAGAGTCA | + |
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Preference number: 1 (lower is better) Translates to: ETYSHLRFTLTVHYL*SASLKRRNAHSAES Trigger: TGACTCTGCACTGTGGGCATTGCGCCTCTTGAGAGATGCAGAGCAGAGGTAGTGAACAGTCAGAGTGAACCGTAGGTGGGAATAGGTTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
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| 3UTR TCA 90 bp | AAATTGGACAATTCCTTGAAACCTATTCCCACCTACGGTTCACTCTaGCTGTTCACTACCTCTGCTCTGCATCTCTCAAGAGGCGCAATG | + |
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Preference number: 1 (lower is better) Translates to: KLDNSLKPIPTYGSL*LFTTSALHLSRGAM Trigger: CATTGCGCCTCTTGAGAGATGCAGAGCAGAGGTAGTGAACAGTCAGAGTGAACCGTAGGTGGGAATAGGTTTCAAGGAATTGTCCAATTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
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| 3UTR CCA 90 bp | TTGAAAGAAATTTGTTTATTATCCTTTCCCACTCTCTCCAGAAGCTaGGTATTCTGTCTCCAAGGGTTCAGTGGAGAAAGTGGAGCCCTG | + |
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Preference number: 1 (lower is better) Translates to: LKEICLLSFPTLSRS*VFCLQGFSGESGAL Trigger: CAGGGCTCCACTTTCTCCACTGAACCCTTGGAGACAGAATACCCAGCTTCTGGAGAGAGTGGGAAAGGATAATAAACAAATTTCTTTCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 |
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| 3UTR CCA 90 bp | ATAAACCCGAGTATATCTTGGAAGTTTGTAAGTAACAAGATCAGGTaGGCTGGCTCATCCTTGTGTCTTCTAGACATAGTGCATGGGTCC | + |
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Preference number: 1 (lower is better) Translates to: INPSISWKFVSNKIR*AGSSLCLLDIVHGS Trigger: GGACCCATGCACTATGTCTAGAAGACACAAGGATGAGCCAGCCCACCTGATCTTGTTACTTACAAACTTCCAAGATATACTCGGGTTTAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 ENSMUST00000177471.2 |
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| 3UTR CCA 90 bp | TTGAGCCTTTCCATTTTCAGACCAAAAATAAACCCGAGTATATCTTaGAAGTTTGTAAGTAACAAGATCAGGTGGGCTGGCTCATCCTTG | + |
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Preference number: 1 (lower is better) Translates to: LSLSIFRPKINPSIS*KFVSNKIRWAGSSL Trigger: CAAGGATGAGCCAGCCCACCTGATCTTGTTACTTACAAACTTCCAAGATATACTCGGGTTTATTTTTGGTCTGAAAATGGAAAGGCTCAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 ENSMUST00000177471.2 |
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| 3UTR-3UTR CCA 90 bp | GGTCTAGGGACCCCTTCTCCAGCTGCCCTCAGTGGAGGGGGACACCCTCCCTTCCAGCAACGAGGAGGCTaGGCCACTGCCTTATCCCGA | + |
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Preference number: 2 (lower is better) Translates to: GLGTPSPAALSGGGHPPFQQRGG*ATALSR Trigger: TCGGGATAAGGCAGTGGCCCAGCCTCCTCGTTGCTG...GAAGGGAGGGTGTCCCCCTCCACTGAGGGCAGCTGGAGAAGGGGTCCCTAGACC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000134109.2 |
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| 3UTR-3UTR TCA 90 bp | CCACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGCAAGCCAAAAGCTTATaGGTGCTTAATACTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PRRRAARALRSRVGGWGGQAKSL*VLNTGE Trigger: CTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTTG...CCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000177207.2 |
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| 3UTR-3UTR GCA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTCCAAAAGCTTATGAGTaGTTAATACTGGGGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: HEGEPPELSEAGWAAGEGPKAYE*LILGRK Trigger: CTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGG...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 5 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000177207.2 |
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| 3UTR-3UTR CCA 90 bp | TTTGAAGGGAAGGAGAAGAGAGCGCAGAATCCAGGAGCAGCCCACTTTCCGAACAGCAGGGTGGGCGGCTaGGGAGGGTTGAAAAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: FEGKEKRAQNPGAAHFPNSRVGG*GGLKRH Trigger: GTGCCTTTTCAACCCTCCCCAGCCGCCCACCCTGCT...GTTCGGAAAGTGGGCTGCTCCTGGATTCTGCGCTCTCTTCTCCTTCCCTTCAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000177207.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACGGGGAGTTTACTTCGCAAGACTTCAGCAGCTAGATTCCGGGATTACACAGCGGCTGGGGAGGGTTaGAAAGGCACAGAGCTCCTC | + |
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Preference number: 2 (lower is better) Translates to: VTGSLLRKTSAARFRDYTAAGEG*KGTELL Trigger: GAGGAGCTCTGTGCCTTTTCAACCCTCCCCAGCCGC...TGTGTAATCCCGGAATCTAGCTGCTGAAGTCTTGCGAAGTAAACTCCCCGTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
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| 3UTR-3UTR TCA 90 bp | GTGCAGAGTCAGCCCTTCAACCCTAACAGGCGTTTACTGCTTAGGAACACAGACGAGAAAGTGGAGCCCTaGCGTCAAAAGCTCTCCGTG | + |
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Preference number: 2 (lower is better) Translates to: VQSQPFNPNRRLLLRNTDEKVEP*RQKLSV Trigger: CACGGAGAGCTTTTGACGTCAGGGCTCCACTTTCTC...GTCTGTGTTCCTAAGCAGTAAACGCCTGTTAGGGTTGAAGGGCTGACTCTGCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
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| 3UTR-3UTR CCA 90 bp | CAGGTGGGCTGGCTCATCCTTGTGTCTTCTAGACATAGTGCATGGGTCCGTTCAACTCTCTCCAGAAGCTaGGTATTCTGTCTCCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: QVGWLILVSSRHSAWVRSTLSRS*VFCLQG Trigger: CCCTTGGAGACAGAATACCCAGCTTCTGGAGAGAGT...TGAACGGACCCATGCACTATGTCTAGAAGACACAAGGATGAGCCAGCCCACCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 ENSMUST00000177471.2 |
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| 3UTR-3UTR CCA 90 bp | TCTAGGAAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAGCAGGGTGGGCGGCTaGGGAGGGTTGAAAAGGCAC | + |
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Preference number: 2 (lower is better) Translates to: SRKDKPHLFRQPMKHLHFSRVGG*GGLKRH Trigger: GTGCCTTTTCAACCCTCCCCAGCCGCCCACCCTGCT...GAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTTCCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
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| 3UTR-3UTR TCA 90 bp | ATCCTTGTGTCTTCTAGACATAGTGCATGGGTCCGTTCACCACTGCCTTCCACAGAGGACTTCCTTTGCTaGAGAGGTAGGATGTTTACC | + |
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Preference number: 2 (lower is better) Translates to: ILVSSRHSAWVRSPLPSTEDFLC*RGRMFT Trigger: GGTAAACATCCTACCTCTTCAGCAAAGGAAGTCCTC...TGTGGAAGGCAGTGGTGAACGGACCCATGCACTATGTCTAGAAGACACAAGGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 ENSMUST00000177471.2 |
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| 3UTR-3UTR GCA 90 bp | AGCTGCTTTGAAAGACAAGACTCTCAAGCTTCCTCTATTTCAGTCTTCAGAATACACTGCCTTCCACACTaGAGGTGCTGCCACGGGGAC | + |
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Preference number: 2 (lower is better) Translates to: SCFERQDSQASSISVFRIHCLPH*RCCHGD Trigger: GTCCCCGTGGCAGCACCTGCAGTGTGGAAGGCAGTG...TATTCTGAAGACTGAAATAGAGGAAGCTTGAGAGTCTTGTCTTTCAAAGCAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 ENSMUST00000177471.2 |
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| 3UTR-3UTR TCA 90 bp | CCTAGGTCCCAGCTACCTGTCACCGTTGTGTCACTAACAGTTTTGTGTCTTCTGCAAGCCAAAAGCTTATaGGTGCTTAATACTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: PRSQLPVTVVSLTVLCLLQAKSL*VLNTGE Trigger: CTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTTG...CAGAAGACACAAAACTGTTAGTGACACAACGGTGACAGGTAGCTGGGACCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
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| 3UTR-3UTR TCA 90 bp | GTCACGGGGAGTTTACTTCGCAAGACTTCAGCAGCTAGATTCCGGGATTACACACAAGCCAAAAGCTTATaGGTGCTTAATACTGGGGAG | + |
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Preference number: 2 (lower is better) Translates to: VTGSLLRKTSAARFRDYTQAKSL*VLNTGE Trigger: CTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTTG...TGTGTAATCCCGGAATCTAGCTGCTGAAGTCTTGCGAAGTAAACTCCCCGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
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| 3UTR-3UTR TCA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGCCTCTCCGAGTTCTTTaGAGGGAAGGAGAAGAGAGC | + |
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Preference number: 2 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVPLRVL*REGEES Trigger: GCTCTCTTCTCCTTCCCTTCAAAGAACTCGGAGAGG...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
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| 3UTR-3UTR CCA 90 bp | AGAGCTGCTTTGAAAGACAAGACTCTCAAGCTTCCTCTATTTCAGTCTTCAGAAAGCTCTCCGTGGTCTTaGCTGTATCTGTGCTGTGGC | + |
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Preference number: 2 (lower is better) Translates to: RAALKDKTLKLPLFQSSESSPWS*LYLCCG Trigger: GCCACAGCACAGATACAGCCAAGACCACGGAGAGCT...TTCTGAAGACTGAAATAGAGGAAGCTTGAGAGTCTTGTCTTTCAAAGCAGCTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 |
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| 3UTR-3UTR CCA 90 bp | TGGAAGTTTGTAAGTAACAAGATCAGGTGGGCTGGCTCATCCTTGTGTCTTCTAGTCAAAAGCTCTCCGTaGTCTTGGCTGTATCTGTGC | + |
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Preference number: 2 (lower is better) Translates to: WKFVSNKIRWAGSSLCLLVKSSP*SWLYLC Trigger: GCACAGATACAGCCAAGACCACGGAGAGCTTTTGAC...TAGAAGACACAAGGATGAGCCAGCCCACCTGATCTTGTTACTTACAAACTTCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 |
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| 3UTR-3UTR GCA 90 bp | TGGAAGTTTGTAAGTAACAAGATCAGGTGGGCTGGCTCATCCTTGTGTCTTCTATCTTGGCTGTATCTGTaGTGTGGCTCTAGGATCACT | + |
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Preference number: 2 (lower is better) Translates to: WKFVSNKIRWAGSSLCLLSWLYL*CGSRIT Trigger: AGTGATCCTAGAGCCACAGCACAGATACAGCCAAGA...TAGAAGACACAAGGATGAGCCAGCCCACCTGATCTTGTTACTTACAAACTTCCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAAGCAGATACAGAGAGCTGCTTTGAAAGACAAGACTCTCAAGCTTCCTCTAGTTCAGTGGAGAAAGTaGAGCCCTGACGTCAAAAGC | + |
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Preference number: 2 (lower is better) Translates to: FKQIQRAALKDKTLKLPLVQWRK*SPDVKS Trigger: GCTTTTGACGTCAGGGCTCCACTTTCTCCACTGAAC...TAGAGGAAGCTTGAGAGTCTTGTCTTTCAAAGCAGCTCTCTGTATCTGCTTGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 |
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| 3UTR-3UTR CCA 90 bp | AGTATATCTTGGAAGTTTGTAAGTAACAAGATCAGGTGGGCTGGCTCATCCTTGACTCTCTCCAGAAGCTaGGTATTCTGTCTCCAAGGG | + |
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Preference number: 2 (lower is better) Translates to: SISWKFVSNKIRWAGSSLTLSRS*VFCLQG Trigger: CCCTTGGAGACAGAATACCCAGCTTCTGGAGAGAGT...CAAGGATGAGCCAGCCCACCTGATCTTGTTACTTACAAACTTCCAAGATATACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 ENSMUST00000177471.2 |
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| 3UTR-3UTR CCA 90 bp | TTCAAGCAGATACAGAGAGCTGCTTTGAAAGACAAGACTCTCAAGCTTCCTCTACAAGATCAGGTGGGCTaGCTCATCCTTGTGTCTTCT | + |
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Preference number: 2 (lower is better) Translates to: FKQIQRAALKDKTLKLPLQDQVG*LILVSS Trigger: AGAAGACACAAGGATGAGCCAGCCCACCTGATCTTG...TAGAGGAAGCTTGAGAGTCTTGTCTTTCAAAGCAGCTCTCTGTATCTGCTTGAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 ENSMUST00000177471.2 |
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| 3UTR-3UTR TCA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGCAGTTTTGTGTCTTCTaGTGGTTCAGAAAAGAGGGA | + |
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Preference number: 2 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVQFCVF*WFRKEG Trigger: TCCCTCTTTTCTGAACCATCAGAAGACACAAAACTG...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
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| 3UTR-3UTR CCA 90 bp | ATCTTACTAAGGCAGGACAACAAAGCTGTCATCATTCTACAGGAATTCAGAGTTAGTAACAAGATCAGGTaGGCTGGCTCATCCTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: ILLRQDNKAVIILQEFRVSNKIR*AGSSLC Trigger: ACACAAGGATGAGCCAGCCCACCTGATCTTGTTACT...AACTCTGAATTCCTGTAGAATGATGACAGCTTTGTTGTCCTGCCTTAGTAAGAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
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| 3UTR-3UTR TCA 90 bp | ATCTTACTAAGGCAGGACAACAAAGCTGTCATCATTCTACAGGAATTCAGAGTTAATTGGACAATTCCTTaGAACCTATTCCCACCTACG | + |
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Preference number: 2 (lower is better) Translates to: ILLRQDNKAVIILQEFRVNWTIP*NLFPPT Trigger: CGTAGGTGGGAATAGGTTTCAAGGAATTGTCCAATT...AACTCTGAATTCCTGTAGAATGATGACAGCTTTGTTGTCCTGCCTTAGTAAGAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTCTTCTGATGGTTCAGAAAAGAGGGACAGTACTATCGTGTTTTATAAGCTTCCAAAAGCTTATGAGTaGTTAATACTGGGGAGAAAG | + |
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Preference number: 2 (lower is better) Translates to: VSSDGSEKRDSTIVFYKLPKAYE*LILGRK Trigger: CTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGG...AAGCTTATAAAACACGATAGTACTGTCCCTCTTTTCTGAACCATCAGAAGACAC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
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| 3UTR CCA 72 bp | CGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTaGGGAGGGTTGAAAAGGCACAGAGCTCCTCGGGGT | + |
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Preference number: 3 (lower is better) Translates to: RAARALRSRVGG*GGLKRHRAPRG Trigger: ACCCCGAGGAGCTCTGTGCCTTTTCAACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000177207.2 |
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| 3UTR CCA 72 bp | AGGCTGGGCCACTGCCTTATCCCGACACGGAGTGAATaGGTCCAGAGCAGGGCCGCTCACAACCTGGGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: RLGHCLIPTRSE*VQSRAAHNLGP Trigger: GGGCCCCAGGTTGTGAGCGGCCCTGCTCTGGACCCATTCACTCCGTGTCGGGATAAGGCAGTGGCCCAGCCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134109.2 |
||
| 3UTR CCA 72 bp | GGAGTGAATGGGTCCAGAGCAGGGCCGCTCACAACCTaGGGCCCTTCTCCTTCCCTGGCAGTCGTGTGGGGA | + |
|
Preference number: 3 (lower is better) Translates to: GVNGSRAGPLTT*GPSPSLAVVWG Trigger: TCCCCACACGACTGCCAGGGAAGGAGAAGGGCCCCAGGTTGTGAGCGGCCCTGCTCTGGACCCATTCACTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134109.2 |
||
| 3UTR CCA 72 bp | GGGCCCTTCTCCTTCCCTGGCAGTCGTGTGGGGATGTaGCTTCTCTCCACGCTGGCAGGGGAGAGAGAACGA | + |
|
Preference number: 3 (lower is better) Translates to: GPFSFPGSRVGM*LLSTLAGERER Trigger: TCGTTCTCTCTCCCCTGCCAGCGTGGAGAGAAGCCACATCCCCACACGACTGCCAGGGAAGGAGAAGGGCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134109.2 |
||
| 3UTR CCA 72 bp | ACAACCTGGGGCCCTTCTCCTTCCCTGGCAGTCGTGTaGGGATGTGGCTTCTCTCCACGCTGGCAGGGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: TTWGPSPSLAVV*GCGFSPRWQGR Trigger: TCTCCCCTGCCAGCGTGGAGAGAAGCCACATCCCCACACGACTGCCAGGGAAGGAGAAGGGCCCCAGGTTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134109.2 |
||
| 3UTR CCA 72 bp | CTGGCAGTCGTGTGGGGATGTGGCTTCTCTCCACGCTaGCAGGGGAGAGAGAACGAGCTAGCGCTGGCATTT | + |
|
Preference number: 3 (lower is better) Translates to: LAVVWGCGFSPR*QGRENELALAF Trigger: AAATGCCAGCGCTAGCTCGTTCTCTCTCCCCTGCCAGCGTGGAGAGAAGCCACATCCCCACACGACTGCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134109.2 |
||
| 3UTR GCA 72 bp | TGTCTTCTAGACATAGTGCATGGGTCCGTTCACCACTaGCTTCCACACTGCAGGTGCTGCCACGGGGACAGA | + |
|
Preference number: 3 (lower is better) Translates to: CLLDIVHGSVHH*LPHCRCCHGDR Trigger: TCTGTCCCCGTGGCAGCACCTGCAGTGTGGAAGGCAGTGGTGAACGGACCCATGCACTATGTCTAGAAGACA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 ENSMUST00000177471.2 |
||
| 3UTR GCA 72 bp | GCTCCTCGGGGTCAATTAAACCATTCCTCAGACATCTaGCACGTTGCACAGGGCACATCCCTGCTCACTCTC | + |
|
Preference number: 3 (lower is better) Translates to: APRGQLNHSSDI*HVAQGTSLLTL Trigger: GAGAGTGAGCAGGGATGTGCCCTGTGCAACGTGGCAGATGTCTGAGGAATGGTTTAATTGACCCCGAGGAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 7 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| 3UTR CCA 72 bp | GGCTGGCTCATCCTTGTGTCTTCTAGACATAGTGCATaGGTCCGTTCACCACTGCCTTCCACACTGCAGGTG | + |
|
Preference number: 3 (lower is better) Translates to: GWLILVSSRHSA*VRSPLPSTLQV Trigger: CACCTGCAGTGTGGAAGGCAGTGGTGAACGGACCCATGCACTATGTCTAGAAGACACAAGGATGAGCCAGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 ENSMUST00000177471.2 |
||
| 3UTR CCA 72 bp | AACCCTAACAGGCGTTTACTGCTTAGGAACACAGACTaGGCTCCACTGGGCCTCCAAGACAGCTCCATGGCT | + |
|
Preference number: 3 (lower is better) Translates to: NPNRRLLLRNTD*APLGLQDSSMA Trigger: AGCCATGGAGCTGTCTTGGAGGCCCAGTGGAGCCCAGTCTGTGTTCCTAAGCAGTAAACGCCTGTTAGGGTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| 3UTR-3UTR CAA 90 bp | GTCACGGGGAGTTTACTTCGCAAGACTTCAGCAGCTAGATTCCGGGATTACACACAGACATCTGCCACGTaGCACAGGGCACATCCCTGC | + |
|
Preference number: 3 (lower is better) Translates to: VTGSLLRKTSAARFRDYTQTSAT*HRAHPC Trigger: GCAGGGATGTGCCCTGTGCAACGTGGCAGATGTCTG...TGTGTAATCCCGGAATCTAGCTGCTGAAGTCTTGCGAAGTAAACTCCCCGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| 3UTR GCA 72 bp | GTGGGGGACATGCGCAGAACGACTATACAGGTGAGGTaGAGAAACCCCTACTGGGAAATCCACTTCCTTAGC | + |
|
Preference number: 3 (lower is better) Translates to: VGDMRRTTIQVR*RNPYWEIHFLS Trigger: GCTAAGGAAGTGGATTTCCCAGTAGGGGTTTCTGCACCTCACCTGTATAGTCGTTCTGCGCATGTCCCCCAC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| 3UTR GCA 72 bp | GACGTCAAAAGCTCTCCGTGGTCTTGGCTGTATCTGTaGTGTGGCTCTAGGATCACTCCTTGTACCTCTGGG | + |
|
Preference number: 3 (lower is better) Translates to: DVKSSPWSWLYL*CGSRITPCTSG Trigger: CCCAGAGGTACAAGGAGTGATCCTAGAGCCACAGCACAGATACAGCCAAGACCACGGAGAGCTTTTGACGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| 3UTR GCA 72 bp | CCTACGGTTCACTCTGACTGTTCACTACCTCTGCTCTaGATCTCTCAAGAGGCGCAATGCCCACAGTGCAGA | + |
|
Preference number: 3 (lower is better) Translates to: PTVHSDCSLPLL*ISQEAQCPQCR Trigger: TCTGCACTGTGGGCATTGCGCCTCTTGAGAGATGCAGAGCAGAGGTAGTGAACAGTCAGAGTGAACCGTAGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| 3UTR GCA 72 bp | TCCCACCTACGGTTCACTCTGACTGTTCACTACCTCTaGTCTGCATCTCTCAAGAGGCGCAATGCCCACAGT | + |
|
Preference number: 3 (lower is better) Translates to: SHLRFTLTVHYL*SASLKRRNAHS Trigger: ACTGTGGGCATTGCGCCTCTTGAGAGATGCAGAGCAGAGGTAGTGAACAGTCAGAGTGAACCGTAGGTGGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| 3UTR CCA 72 bp | AAGTGGAGCCCTGACGTCAAAAGCTCTCCGTGGTCTTaGCTGTATCTGTGCTGTGGCTCTAGGATCACTCCT | + |
|
Preference number: 3 (lower is better) Translates to: KWSPDVKSSPWS*LYLCCGSRITP Trigger: AGGAGTGATCCTAGAGCCACAGCACAGATACAGCCAAGACCACGGAGAGCTTTTGACGTCAGGGCTCCACTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| 3UTR CCA 72 bp | CTGGGTATTCTGTCTCCAAGGGTTCAGTGGAGAAAGTaGAGCCCTGACGTCAAAAGCTCTCCGTGGTCTTGG | + |
|
Preference number: 3 (lower is better) Translates to: LGILSPRVQWRK*SPDVKSSPWSW Trigger: CCAAGACCACGGAGAGCTTTTGACGTCAGGGCTCCACTTTCTCCACTGAACCCTTGGAGACAGAATACCCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGTGGGCTGGCTCATCCTTGTGTCTTCTAGACATAGTGCATGGGTCCGTTCATTAGTGGACCGAGGGTaGTGCTGTCCTGTTCTCTAC | + |
|
Preference number: 3 (lower is better) Translates to: QVGWLILVSSRHSAWVRSLVDRG*CCPVLY Trigger: GTAGAGAACAGGACAGCACAACCCTCGGTCCACTAA...TGAACGGACCCATGCACTATGTCTAGAAGACACAAGGATGAGCCAGCCCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| 3UTR CCA 72 bp | GGCGTTTACTGCTTAGGAACACAGACTGGGCTCCACTaGGCCTCCAAGACAGCTCCATGGCTTTCATCATTT | + |
|
Preference number: 3 (lower is better) Translates to: GVYCLGTQTGLH*ASKTAPWLSSF Trigger: AAATGATGAAAGCCATGGAGCTGTCTTGGAGGCCCAGTGGAGCCCAGTCTGTGTTCCTAAGCAGTAAACGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| 3UTR-3UTR CAA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGGGCGGCTGGGGAGGGTaGAAAAGGCACAGAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVGGWGG*KRHRAP Trigger: AGGAGCTCTGTGCCTTTTCAACCCTCCCCAGCCGCC...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| 3UTR-3UTR CAA 90 bp | TCTAGGAAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCGGCGGCTGGGGAGGGTaGAAAAGGCACAGAGCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: SRKDKPHLFRQPMKHLHFGGWGG*KRHRAP Trigger: AGGAGCTCTGTGCCTTTTCAACCCTCCCCAGCCGCC...GAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTTCCTAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| 3UTR-3UTR CAA 90 bp | CTGTCTTCAGTGCTGAGACAAAAGGCTAGTGGGCTCAGGCATAAAATGGCTCCTGACAGCTGCGGCCAATaGGTAAATTGGACAATTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LSSVLRQKASGLRHKMAPDSCGQ*VNWTIP Trigger: AGGAATTGTCCAATTTACCAATTGGCCGCAGCTGTC...AGGAGCCATTTTATGCCTGAGCCCACTAGCCTTTTGTCTCAGCACTGAAGACAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| 3UTR-3UTR CAA 90 bp | AGAACGACTATACAGGTGAGGTGCAGAAACCCCTACTGGGAAATCCACTTCCTTGTGTCACTAACAGTTTaGTGTCTTCTGATGGTTCAG | + |
|
Preference number: 3 (lower is better) Translates to: RTTIQVRCRNPYWEIHFLVSLTV*CLLMVQ Trigger: CTGAACCATCAGAAGACACAAAACTGTTAGTGACAC...AAGGAAGTGGATTTCCCAGTAGGGGTTTCTGCACCTCACCTGTATAGTCGTTCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| 3UTR TCA 72 bp | AATTCCTTGAAACCTATTCCCACCTACGGTTCACTCTaGCTGTTCACTACCTCTGCTCTGCATCTCTCAAGA | + |
|
Preference number: 3 (lower is better) Translates to: NSLKPIPTYGSL*LFTTSALHLSR Trigger: TCTTGAGAGATGCAGAGCAGAGGTAGTGAACAGTCAGAGTGAACCGTAGGTGGGAATAGGTTTCAAGGAATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCCTTTCCATTTTCAGACCAAAAATAAACCCGAGTATATCTTGGAAGTTTGTAAGCTCTCCGTGGTCTaGGCTGTATCTGTGCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: EPFHFQTKNKPEYILEVCKLSVV*AVSVLW Trigger: CCACAGCACAGATACAGCCAAGACCACGGAGAGCTT...ACAAACTTCCAAGATATACTCGGGTTTATTTTTGGTCTGAAAATGGAAAGGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 |
||
| 3UTR TCA 72 bp | CACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATaGGTGCTTAATACTGGGGAGAAAGCGAGAACAGCG | + |
|
Preference number: 3 (lower is better) Translates to: HSTSTFLQAKSL*VLNTGEKARTA Trigger: CGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| 3UTR CCA 72 bp | ATTTGTTTATTATCCTTTCCCACTCTCTCCAGAAGCTaGGTATTCTGTCTCCAAGGGTTCAGTGGAGAAAGT | + |
|
Preference number: 3 (lower is better) Translates to: ICLLSFPTLSRS*VFCLQGFSGES Trigger: ACTTTCTCCACTGAACCCTTGGAGACAGAATACCCAGCTTCTGGAGAGAGTGGGAAAGGATAATAAACAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 |
||
| 3UTR CCA 72 bp | AGGCTAGTGGGCTCAGGCATAAAATGGCTCCTACTGTaGTTTAAAGAATACAACAGGATGTCTAGTAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: RLVGSGIKWLLL*FKEYNRMSSKS Trigger: GGATTTACTAGACATCCTGTTGTATTCTTTAAACCACAGTAGGAGCCATTTTATGCCTGAGCCCACTAGCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| 3UTR-3UTR CAA 90 bp | ACTAAGGCAGGACAACAAAGCTGTCATCATTCTACAGGAATTCAGAGTTCTGTGATACAGAGAGCTGCTTaGAAAGACAAGACTCTCAAG | + |
|
Preference number: 3 (lower is better) Translates to: TKAGQQSCHHSTGIQSSVIQRAA*KDKTLK Trigger: CTTGAGAGTCTTGTCTTTCAAAGCAGCTCTCTGTAT...CACAGAACTCTGAATTCCTGTAGAATGATGACAGCTTTGTTGTCCTGCCTTAGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| 3UTR CCA 72 bp | AGTATATCTTGGAAGTTTGTAAGTAACAAGATCAGGTaGGCTGGCTCATCCTTGTGTCTTCTAGACATAGTG | + |
|
Preference number: 3 (lower is better) Translates to: SISWKFVSNKIR*AGSSLCLLDIV Trigger: CACTATGTCTAGAAGACACAAGGATGAGCCAGCCCACCTGATCTTGTTACTTACAAACTTCCAAGATATACT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000175984.2 ENSMUST00000176886.2 ENSMUST00000177471.2 |
||
| 3UTR TCA 72 bp | AAGAGGGACAGTACTATCGTGTTTTATAAGCTTTGGTaGCAGTTGTCGGTTTTGTATAAGGACTGCATCATC | + |
|
Preference number: 3 (lower is better) Translates to: KRDSTIVFYKLW*QLSVLYKDCII Trigger: GATGATGCAGTCCTTATACAAAACCGACAACTGTCACCAAAGCTTATAAAACACGATAGTACTGTCCCTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| 3UTR TCA 72 bp | TACACAAAGTTTGACTTTGCAGTAGCTTGTAGCGTATaGGGTAATAGGAATGCACTAACATCTCGTTTGCAT | + |
|
Preference number: 3 (lower is better) Translates to: YTKFDFAVACSV*GNRNALTSRLH Trigger: ATGCAAACGAGATGTTAGTGCATTCCTATTACCTCATACGCTACAAGCTACTGCAAAGTCAAACTTTGTGTA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| CDS-3UTR CCA 90 bp | CCACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGGTGCAGGGGGCTGTGTaGTCCCCTGTGGCTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRRRAARALRSRVGGWGGVQGAV*SPVAAW Trigger: CCACGCAGCCACAGGGGACCACACAGCCCCCTGCAC...CCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTGG 72% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 5 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTCCTGTGGCTGCGTGGTaGCCGGAGGGGAGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: HEGEPPELSEAGWAAGEGPVAAW*PEGSQS Trigger: AGACTGGCTCCCCTCCGGCCACCACGCAGCCACAGG...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | CGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTGCTGTGTGGTCCCCTGTaGCTGCGTGGTGGCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RRRAARALRSRVGGWGGLLCGPL*LRGGRR Trigger: CCTCCGGCCACCACGCAGCCACAGGGGACCACACAG...CAACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 5 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | CGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTGGTGCAGGGGGCTGTGTaGTCCCCTGTGGCTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RRRAARALRSRVGGWGGLVQGAV*SPVAAW Trigger: CCACGCAGCCACAGGGGACCACACAGCCCCCTGCAC...CAACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCG 71% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 5 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR TCA 90 bp | CCACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTGGAGAGCCACACCTTaGAGACCTGGAGGCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: PRRRAARALRSRVGGWGGWRATP*RPGGAG Trigger: ACCAGCGCCTCCAGGTCTTCAAGGTGTGGCTCTCCA...CCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | CCACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGGCCACTCGATGGTACTaGAGGAGGAGGTGCGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: PRRRAARALRSRVGGWGGATRWY*RRRCDW Trigger: CCAGTCGCACCTCCTCCTGCAGTACCATCGAGTGGC...CCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTGG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | CCACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGCCTTCGAGGGAACATTaGCGGGTGCGCCATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PRRRAARALRSRVGGWGGPSREH*RVRHLP Trigger: AGGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGG...CCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | CGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTGCGAGCTGCTCCGGACTaGCCAGCGTCTTCAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: RRRAARALRSRVGGWGGLRAAPD*PASSAD Trigger: ATCTGCTGAAGACGCTGGCCAGTCCGGAGCAGCTCG...CAACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 5 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTTGCGGCACTCATGGTaGCTTGCAGAGGGACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: HEGEPPELSEAGWAAGEGLRHSW*LAEGQA Trigger: AGCCTGTCCCTCTGCAAGCCACCATGAGTGCCGCAA...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | CGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTGCAGTTGCGGCACTCATaGTGGCTTGCAGAGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: RRRAARALRSRVGGWGGLQLRHS*WLAEGQ Trigger: CTGTCCCTCTGCAAGCCACCATGAGTGCCGCAACTG...CAACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | CCACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGGCAGAGGACTGCCTGTaGGCAACTGCTGGGAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: PRRRAARALRSRVGGWGGAEDCL*ATAGKQ Trigger: TTGTTTCCCAGCAGTTGCCCACAGGCAGTCCTCTGC...CCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | CGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTGTATGGCAGCTGCGGTTaGGCCAGGCTGGAAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RRRAARALRSRVGGWGGLYGSCG*ARLETE Trigger: TTCTGTTTCCAGCCTGGCTCAACCGCAGCTGCCATA...CAACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTGGATCCCCTGTGCCTaGGCCACAGGAATCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: HEGEPPELSEAGWAAGEGWIPCA*ATGITD Trigger: ATCAGTGATTCCTGTGGCTCAGGCACAGGGGATCCA...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTCTGGTTAGGAGAGACTaGCCCAGGTGTCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: HEGEPPELSEAGWAAGEGLVRRD*PRCLSF Trigger: GAAGCTGAGACACCTGGGGCAGTCTCTCCTAACCAG...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR GCA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTAGGTTGTGTTTGTACTaGTGTGGGCTGCCCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: HEGEPPELSEAGWAAGEGRLCLY*CGLPWQ Trigger: CTGCCAGGGCAGCCCACAGCAGTACAAACACAACCT...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | CCACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGGGTGGCTGGGGGTTGTaGTATATTCTGTGGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PRRRAARALRSRVGGWGGGGWGL*YILWWN Trigger: GTTCCACCACAGAATATAGCACAACCCCCAGCCACC...CCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | CGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTGCAGGGGCTGCTAGGCTaGTGCTACTCCCATCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: RRRAARALRSRVGGWGGLQGLLG*CYSHLK Trigger: TTTCAGATGGGAGTAGCAGCAGCCTAGCAGCCCCTG...CAACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR CCA 90 bp | CCACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGACCAAACTGCCATTTTaGGTGGCTGGGGGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PRRRAARALRSRVGGWGGTKLPF*VAGGCA Trigger: AGCACAACCCCCAGCCACCCAAAATGGCAGTTTGGT...CCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTGG 66% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR TCA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTCGTCACACTGGGACTaGAACTACCCACAGCAGCAA | + |
|
Preference number: 4 (lower is better) Translates to: HEGEPPELSEAGWAAGEGSSHWD*NYPQQQ Trigger: TTGCTGCTGTGGGTAGTTTCAGTCCCAGTGTGACGA...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048371.15 |
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| CDS-3UTR CCA 90 bp | CGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTGCCATATTGTAACTGCTaGGGTGGTGCCCCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: RRRAARALRSRVGGWGGLPYCNC*GGAPGR Trigger: TCTTCCAGGGGCACCACCCCAGCAGTTACAATATGG...CAACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | CCACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGGATGGGCATTCCCATTaGTCACAACGTTCTGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PRRRAARALRSRVGGWGGDGHSH*SQRSVV Trigger: CACAACAGAACGTTGTGATCAATGGGAATGCCCATC...CCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTCTGAAGTTGGATTTTaGGTCACTGGCTGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: HEGEPPELSEAGWAAGEGSEVGF*VTGWPW Trigger: CCATGGCCAGCCAGTGACTCAAAATCCAACTTCAGA...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTTGTTGTGGAAGGCTTaGAGCACGGGTTTGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: HEGEPPELSEAGWAAGEGLLWKA*STGLNS Trigger: GGAGTTCAAACCCGTGCTTCAAGCCTTCCACAACAA...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR CCA 90 bp | CCACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGGGTGTCTCAGCTTCCTaGAAGTTATTCAGAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: PRRRAARALRSRVGGWGGGVSAS*KLFRVS Trigger: GGAGACTCTGAATAACTTCCAGGAAGCTGAGACACC...CCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTGG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | CCACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGCACAACGTTCTGTTGTaGAAGGTGAGGCAAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: PRRRAARALRSRVGGWGGHNVLL*KVRQMR Trigger: CCTCATTTGCCTCACCTTCCACAACAGAACGTTGTG...CCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTGG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | CGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTGCGATGTGTTAACTGTTaGTTGCTGCTGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RRRAARALRSRVGGWGGLRCVNC*LLLLLL Trigger: CAGCAGCAGCAGCAGCAACCAACAGTTAACACATCG...CAACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR TCA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTGATGGGCATTCCCATTaGTCACAACGTTCTGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HEGEPPELSEAGWAAGEGDGHSH*SQRSVV Trigger: CACAACAGAACGTTGTGATCAATGGGAATGCCCATC...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | CGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTGTGGCTTCCAATGGCCTaGGCTAATGATTGTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RRRAARALRSRVGGWGGLWLPMA*ANDCVE Trigger: CTCTACACAATCATTAGCTCAGGCCATTGGAAGCCA...CAACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR GCA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTCCCAGAGGACAATGCTaGTTGAAATATTGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: HEGEPPELSEAGWAAGEGPRGQC*LKYWLL Trigger: CAGCAGCCAATATTTCAAGCAGCATTGTCCTCTGGG...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR GCA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTCAAGGTACTCTGGGGTaGAATGACCAATTGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: HEGEPPELSEAGWAAGEGQGTLG*NDQLLW Trigger: CCACAACAATTGGTCATTGCACCCCAGAGTACCTTG...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR CCA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTACTGAAGGTGTAACTTaGGTAGAGGGCTGCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: HEGEPPELSEAGWAAGEGTEGVT*VEGCCT Trigger: AGTACAGCAGCCCTCTACCCAAGTTACACCTTCAGT...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR CCA 90 bp | CGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTGCCATTTGGCTTCCAATaGCCTGAGCTAATGATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: RRRAARALRSRVGGWGGLPFGFQ*PELMIV Trigger: CACAATCATTAGCTCAGGCCATTGGAAGCCAAATGG...CAACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTCCATTTGGCTTCCAATaGCCTGAGCTAATGATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: HEGEPPELSEAGWAAGEGPFGFQ*PELMIV Trigger: CACAATCATTAGCTCAGGCCATTGGAAGCCAAATGG...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | TCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGGCTTCGTGGTCCCCTGTGGCTaGGTGGTGGCCGGAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: SHVSFVDSNEMGDCGGGFVVPCG*VVAGGE Trigger: CTCCCCTCCGGCCACCACGCAGCCACAGGGGACCAC...GAAGCCGCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
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| CDS-3UTR CCA 90 bp | TCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGGCTTCTCCCCTGTGGCTGCGTaGTGGCCGGAGGGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: SHVSFVDSNEMGDCGGGFSPVAA*WPEGSQ Trigger: CTGGCTCCCCTCCGGCCACCACGCAGCCACAGGGGA...GAAGCCGCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
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| CDS-3UTR GCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACGTGGTCCCCTGTGGCTaGGTGGTGGCCGGAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDVVPCG*VVAGGE Trigger: CTCCCCTCCGGCCACCACGCAGCCACAGGGGACCAC...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
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| CDS-3UTR GCA 90 bp | GCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGTGGTCCCCTGTGGCTaGGTGGTGGCCGGAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ACESHVSFVDSNEMGDCGVVPCG*VVAGGE Trigger: CTCCCCTCCGGCCACCACGCAGCCACAGGGGACCAC...TCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
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| CDS-3UTR GCA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGTGGTCCCCTGTGGCTaGGTGGTGGCCGGAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: ARTACESHVSFVDSNEMGVVPCG*VVAGGE Trigger: CTCCCCTCCGGCCACCACGCAGCCACAGGGGACCAC...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
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| CDS-3UTR GCA 90 bp | TCTGGGAGGAGAGAAGCACTGTTAGTGGACCGAGGGTTGTGCTGTCCTGTTCTCCAGAGGGCAGAGGACTaGCTGTGGGCAACTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: SGRREALLVDRGLCCPVLQRAED*LWATAG Trigger: CCCAGCAGTTGCCCACAGGCAGTCCTCTGCCCTCTG...GAGAACAGGACAGCACAACCCTCGGTCCACTAACAGTGCTTCTCTCCTCCCAGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
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| CDS-3UTR GCA 90 bp | CTGCAGGTGCTGCCACGGGGACAGATAGCGTCCATGAGGGCTCTGCTAGAGGACGGTGGCTGGGGGTTGTaGTATATTCTGTGGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: LQVLPRGQIASMRALLEDGGWGL*YILWWN Trigger: GTTCCACCACAGAATATAGCACAACCCCCAGCCACC...GTCCTCTAGCAGAGCCCTCATGGACGCTATCTGTCCCCGTGGCAGCACCTGCAG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175984.2 |
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| CDS-3UTR CCA 90 bp | TCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGGCTTCCCTGTGGCTGCGTGGTaGCCGGAGGGGAGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: SHVSFVDSNEMGDCGGGFPVAAW*PEGSQS Trigger: AGACTGGCTCCCCTCCGGCCACCACGCAGCCACAGG...GAAGCCGCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
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| CDS-3UTR CCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACTCCCCTGTGGCTGCGTaGTGGCCGGAGGGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDSPVAA*WPEGSQ Trigger: CTGGCTCCCCTCCGGCCACCACGCAGCCACAGGGGA...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
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| CDS-3UTR CCA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTTCCCCTGTGGCTGCGTaGTGGCCGGAGGGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: ARTACESHVSFVDSNEMGSPVAA*WPEGSQ Trigger: CTGGCTCCCCTCCGGCCACCACGCAGCCACAGGGGA...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
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| CDS-3UTR CCA 90 bp | TCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGGCTTCCTGTGTGGTCCCCTGTaGCTGCGTGGTGGCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SHVSFVDSNEMGDCGGGFLCGPL*LRGGRR Trigger: CCTCCGGCCACCACGCAGCCACAGGGGACCACACAG...GAAGCCGCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
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| CDS-3UTR GCA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTACCAGATCCATAGCTTaGTCTATTTTGTTGTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: HEGEPPELSEAGWAAGEGTRSIA*SILLSI Trigger: TATCGACAACAAAATAGAGCAAGCTATGGATCTGGT...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 |
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| CDS-3UTR GCA 90 bp | GAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAGTGGTCCCCTGTGGCTaGGTGGTGGCCGGAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: EKARTACESHVSFVDSNEVVPCG*VVAGGE Trigger: CTCCCCTCCGGCCACCACGCAGCCACAGGGGACCAC...TTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
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| CDS-3UTR GCA 90 bp | TTTGAAGGGAAGGAGAAGAGAGCGCAGAATCCAGGAGCAGCCCACTTTCCGAACCAGAGGGCAGAGGACTaGCTGTGGGCAACTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: FEGKEKRAQNPGAAHFPNQRAED*LWATAG Trigger: CCCAGCAGTTGCCCACAGGCAGTCCTCTGCCCTCTG...GTTCGGAAAGTGGGCTGCTCCTGGATTCTGCGCTCTCTTCTCCTTCCCTTCAAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGACCTGTGGCTGCGTGGTaGCCGGAGGGGAGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: ACESHVSFVDSNEMGDCGPVAAW*PEGSQS Trigger: AGACTGGCTCCCCTCCGGCCACCACGCAGCCACAGG...TCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | GCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGCCTGTGGCTGCGTGGTaGCCGGAGGGGAGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: AYECLILGRKREQRVSLTPVAAW*PEGSQS Trigger: AGACTGGCTCCCCTCCGGCCACCACGCAGCCACAGG...CGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAATCCCCTGTGGCTGCGTaGTGGCCGGAGGGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: EKARTACESHVSFVDSNESPVAA*WPEGSQ Trigger: CTGGCTCCCCTCCGGCCACCACGCAGCCACAGGGGA...TTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | GCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGACTGTGTGGTCCCCTGTaGCTGCGTGGTGGCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: ACESHVSFVDSNEMGDCGLCGPL*LRGGRR Trigger: CCTCCGGCCACCACGCAGCCACAGGGGACCACACAG...TCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | GCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGCTGTGTGGTCCCCTGTaGCTGCGTGGTGGCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: AYECLILGRKREQRVSLTLCGPL*LRGGRR Trigger: CCTCCGGCCACCACGCAGCCACAGGGGACCACACAG...CGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | TGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCCTGTGTGGTCCCCTGTaGCTGCGTGGTGGCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: CESHVSFVDSNEMGDCGGLCGPL*LRGGRR Trigger: CCTCCGGCCACCACGCAGCCACAGGGGACCACACAG...GCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | GCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGTGCAGGGGGCTGTGTaGTCCCCTGTGGCTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: ACESHVSFVDSNEMGDCGVQGAV*SPVAAW Trigger: CCACGCAGCCACAGGGGACCACACAGCCCCCTGCAC...TCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR TCA 90 bp | GTCACGGGGAGTTTACTTCGCAAGACTTCAGCAGCTAGATTCCGGGATTACACAGGCTGTCCCTGCAGCTaGGCCTGCGAGAGGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLLRKTSAARFRDYTGCPCS*ACERRF Trigger: GAACCTCCTCTCGCAGGCTCAGCTGCAGGGACAGCC...TGTGTAATCCCGGAATCTAGCTGCTGAAGTCTTGCGAAGTAAACTCCCCGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | TCCACACTGCAGGTGCTGCCACGGGGACAGATAGCGTCCATGAGGGCTCTGCTATACTCTGGGGTGCAATaGCCAATTGTTGTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: STLQVLPRGQIASMRALLYSGVQ*PIVVEG Trigger: GCCTTCCACAACAATTGGTCATTGCACCCCAGAGTA...TAGCAGAGCCCTCATGGACGCTATCTGTCCCCGTGGCAGCACCTGCAGTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCAAAAGCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGGTGGTCCCCTGTGGCTaGGTGGTGGCCGGAGGGGAG | + |
|
Preference number: 4 (lower is better) Translates to: KPKAYECLILGRKREQRVVVPCG*VVAGGE Trigger: CTCCCCTCCGGCCACCACGCAGCCACAGGGGACCAC...CACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR GCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACTCCCTGCGTGGAAGATaGAGCAGGAGGCGGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDSLRGR*SRRRRL Trigger: CAGCCGCCGCCTCCTGCTGCATCTTCCACGCAGGGA...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | TTTGAAGGGAAGGAGAAGAGAGCGCAGAATCCAGGAGCAGCCCACTTTCCGAACCGAGCTGCTCCGGACTaGCCAGCGTCTTCAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: FEGKEKRAQNPGAAHFPNRAAPD*PASSAD Trigger: ATCTGCTGAAGACGCTGGCCAGTCCGGAGCAGCTCG...GTTCGGAAAGTGGGCTGCTCCTGGATTCTGCGCTCTCTTCTCCTTCCCTTCAAA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | AGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACCCTGTGGCTGCGTGGTaGCCGGAGGGGAGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RTACESHVSFVDSNEMGDPVAAW*PEGSQS Trigger: AGACTGGCTCCCCTCCGGCCACCACGCAGCCACAGG...GTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | AAGCCAAAAGCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGTCCCCTGTGGCTGCGTaGTGGCCGGAGGGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPKAYECLILGRKREQRVSPVAA*WPEGSQ Trigger: CTGGCTCCCCTCCGGCCACCACGCAGCCACAGGGGA...CACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAACTGTGTGGTCCCCTGTaGCTGCGTGGTGGCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: EKARTACESHVSFVDSNELCGPL*LRGGRR Trigger: CCTCCGGCCACCACGCAGCCACAGGGGACCACACAG...TTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | GAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAGTGCAGGGGGCTGTGTaGTCCCCTGTGGCTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKARTACESHVSFVDSNEVQGAV*SPVAAW Trigger: CCACGCAGCCACAGGGGACCACACAGCCCCCTGCAC...TTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | GTCACGGGGAGTTTACTTCGCAAGACTTCAGCAGCTAGATTCCGGGATTACACATTTGAGCCTGGCCAATaGGCTGCCCAGCCGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLLRKTSAARFRDYTFEPGQ*AAQPPL Trigger: CAGGGGCGGCTGGGCAGCCCATTGGCCAGGCTCAAA...TGTGTAATCCCGGAATCTAGCTGCTGAAGTCTTGCGAAGTAAACTCCCCGTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | TCCACACTGCAGGTGCTGCCACGGGGACAGATAGCGTCCATGAGGGCTCTGCTAGTCAAAAGCTCTCCGTaGTCTTGGCTGTATCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: STLQVLPRGQIASMRALLVKSSP*SWLYLC Trigger: GCACAGATACAGCCAAGACCACGGAGAGCTTTTGAC...TAGCAGAGCCCTCATGGACGCTATCTGTCCCCGTGGCAGCACCTGCAGTGTGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177471.2 |
||
| CDS-3UTR TCA 90 bp | TTCCACACTGCAGGTGCTGCCACGGGGACAGATAGCGTCCATGAGGGCTCTGCTTGGCTTCCAATGGCCTaGGCTAATGATTGTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: FHTAGAATGTDSVHEGSAWLPMA*ANDCVE Trigger: CTCTACACAATCATTAGCTCAGGCCATTGGAAGCCA...AGCAGAGCCCTCATGGACGCTATCTGTCCCCGTGGCAGCACCTGCAGTGTGGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175984.2 |
||
| CDS-3UTR GCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACCGCTGCCACCACCGCTaGCCCTTCGAGGGAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDRCHHR*PFEGTL Trigger: CAATGTTCCCTCGAAGGGGCAGCGGTGGTGGCAGCG...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | TTTGAAGGGAAGGAGAAGAGAGCGCAGAATCCAGGAGCAGCCCACTTTCCGAACACTGACGCCCGTACCTaGTGCATTGAGAGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: FEGKEKRAQNPGAAHFPNTDART*CIESRG Trigger: GCCTCTGCTCTCAATGCAGCAGGTACGGGCGTCAGT...GTTCGGAAAGTGGGCTGCTCCTGGATTCTGCGCTCTCTTCTCCTTCCCTTCAAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | TGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGGAGGCTGGGGTCCCTaGGTGGAAGATGCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: CESHVSFVDSNEMGDCGGGGWGP*VEDAAG Trigger: TCCTGCTGCATCTTCCACGCAGGGACCCCAGCCTCC...GCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCAAAAGCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGGTGCAGGGGGCTGTGTaGTCCCCTGTGGCTGCGTGG | + |
|
Preference number: 4 (lower is better) Translates to: KPKAYECLILGRKREQRVVQGAV*SPVAAW Trigger: CCACGCAGCCACAGGGGACCACACAGCCCCCTGCAC...CACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGAGTTTCCTGGACACTaGGCTCGAGGGTGGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: ARTACESHVSFVDSNEMGEFPGH*ARGWPS Trigger: GGAGGGCCACCCTCGAGCCCAGTGTCCAGGAAACTC...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACTGGCTGGCCATGGCCTaGGGCTATCTGCGCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDWLAMA*GYLRRN Trigger: GTTCCTGCGCAGATAGCCCCAGGCCATGGCCAGCCA...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGGTCCCAGCTACCTGTCACCGTTGTGTCACTAACAGTTTTGTGTCTTCTGTGGCTGGCCATGGCCTaGGGCTATCTGCGCAGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: PRSQLPVTVVSLTVLCLLWLAMA*GYLRRN Trigger: GTTCCTGCGCAGATAGCCCCAGGCCATGGCCAGCCA...CAGAAGACACAAAACTGTTAGTGACACAACGGTGACAGGTAGCTGGGACCTAGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | AGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGCTGTGGGCTGCCCTaGCAGCTGGATCCCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTACESHVSFVDSNEMGDCCGLP*QLDPLC Trigger: GCACAGGGGATCCAGCTGCCAGGGCAGCCCACAGCA...GTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GGGACAGATAGCGTCCATGAGGGCTCTGCTAGAGGACTTCCTTTGCTGAAGAGGGCAGAGGACTGCCTGTaGGCAACTGCTGGGAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: GTDSVHEGSARGLPLLKRAEDCL*ATAGKQ Trigger: TTGTTTCCCAGCAGTTGCCCACAGGCAGTCCTCTGC...CCTCTTCAGCAAAGGAAGTCCTCTAGCAGAGCCCTCATGGACGCTATCTGTCCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| CDS-3UTR GCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACGACGCCCGTACCTGCTaGATTGAGAGCAGAGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDDARTC*IESRGA Trigger: AGCGCCTCTGCTCTCAATGCAGCAGGTACGGGCGTC...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGGCCTGGCCAATGGGCTaGCCAGCCGCCCCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVAWPMG*PAAPAG Trigger: ACCTGCAGGGGCGGCTGGGCAGCCCATTGGCCAGGC...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | AGGGTTGAAAAGGCACAGAGCTCCTCGGGGTCAATTAAACCATTCCTCAGACATCAGAGGGCAGAGGACTaGCTGTGGGCAACTGCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: RVEKAQSSSGSIKPFLRHQRAED*LWATAG Trigger: CCCAGCAGTTGCCCACAGGCAGTCCTCTGCCCTCTG...ATGTCTGAGGAATGGTTTAATTGACCCCGAGGAGCTCTGTGCCTTTTCAACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | CTGCCACGGGGACAGATAGCGTCCATGAGGGCTCTGCTAGAGGACTTCCTTTGCTCTTGGCTGTATCTGTaGTGTGGCTCTAGGATCACT | + |
|
Preference number: 4 (lower is better) Translates to: LPRGQIASMRALLEDFLCSWLYL*CGSRIT Trigger: AGTGATCCTAGAGCCACAGCACAGATACAGCCAAGA...GCAAAGGAAGTCCTCTAGCAGAGCCCTCATGGACGCTATCTGTCCCCGTGGCAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177471.2 |
||
| CDS-3UTR CCA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTCGAGCTGCTCCGGACTaGCCAGCGTCTTCAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: ARTACESHVSFVDSNEMGRAAPD*PASSAD Trigger: ATCTGCTGAAGACGCTGGCCAGTCCGGAGCAGCTCG...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACCGAGCTGCTCCGGACTaGCCAGCGTCTTCAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDRAAPD*PASSAD Trigger: ATCTGCTGAAGACGCTGGCCAGTCCGGAGCAGCTCG...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTTGAAAAGGCACAGAGCTCCTCGGGGTCAATTAAACCATTCCTCAGACATGAGGTTCAGGCTTTGTaGAGGCGGAGGCTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RVEKAQSSSGSIKPFLRHEVQAL*RRRLGS Trigger: GGACCCCAGCCTCCGCCTCCACAAAGCCTGAACCTC...ATGTCTGAGGAATGGTTTAATTGACCCCGAGGAGCTCTGTGCCTTTTCAACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | AGAACGACTATACAGGTGAGGTGCAGAAACCCCTACTGGGAAATCCACTTCCTTGAGGTTCAGGCTTTGTaGAGGCGGAGGCTGGGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: RTTIQVRCRNPYWEIHFLEVQAL*RRRLGS Trigger: GGACCCCAGCCTCCGCCTCCACAAAGCCTGAACCTC...AAGGAAGTGGATTTCCCAGTAGGGGTTTCTGCACCTCACCTGTATAGTCGTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GTCACGGGGAGTTTACTTCGCAAGACTTCAGCAGCTAGATTCCGGGATTACACACATCTGAGTTCCGCCTaGCGCAAGAGGCTGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLLRKTSAARFRDYTHLSSA*RKRLSL Trigger: CAGGGACAGCCTCTTGCGCCAGGCGGAACTCAGATG...TGTGTAATCCCGGAATCTAGCTGCTGAAGTCTTGCGAAGTAAACTCCCCGTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTTGAAAAGGCACAGAGCTCCTCGGGGTCAATTAAACCATTCCTCAGACATGTCACTGGCTGGCCATaGCCTGGGGCTATCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RVEKAQSSSGSIKPFLRHVTGWP*PGAICA Trigger: TGCGCAGATAGCCCCAGGCCATGGCCAGCCAGTGAC...ATGTCTGAGGAATGGTTTAATTGACCCCGAGGAGCTCTGTGCCTTTTCAACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | ATAAGCTTTGGTGACAGTTGTCGGTTTTGTATAAGGACTGCATCATCCCTCCCCTTTGAGCCTGGCCAATaGGCTGCCCAGCCGCCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: ISFGDSCRFCIRTASSLPFEPGQ*AAQPPL Trigger: CAGGGGCGGCTGGGCAGCCCATTGGCCAGGCTCAAA...GGGGAGGGATGATGCAGTCCTTATACAAAACCGACAACTGTCACCAAAGCTTAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GGGACAGATAGCGTCCATGAGGGCTCTGCTAGAGGACTTCCTTTGCTGAAGAGGACCAAACTGCCATTTTaGGTGGCTGGGGGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: GTDSVHEGSARGLPLLKRTKLPF*VAGGCA Trigger: AGCACAACCCCCAGCCACCCAAAATGGCAGTTTGGT...CCTCTTCAGCAAAGGAAGTCCTCTAGCAGAGCCCTCATGGACGCTATCTGTCCC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175984.2 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGGGAAGGAGAAGAGAGCGCAGAATCCAGGAGCAGCCCACTTTCCGAACTGCTGTTGTTGGAGCTaGTGCTGGCAGAGATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: FEGKEKRAQNPGAAHFPNCCCWS*CWQRSE Trigger: CTCAGATCTCTGCCAGCATCAGCTCCAACAACAGCA...GTTCGGAAAGTGGGCTGCTCCTGGATTCTGCGCTCTCTTCTCCTTCCCTTCAAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | AGAACGACTATACAGGTGAGGTGCAGAAACCCCTACTGGGAAATCCACTTCCTTTGGAGAGCCACACCTTaGAGACCTGGAGGCGCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: RTTIQVRCRNPYWEIHFLWRATP*RPGGAG Trigger: ACCAGCGCCTCCAGGTCTTCAAGGTGTGGCTCTCCA...AAGGAAGTGGATTTCCCAGTAGGGGTTTCTGCACCTCACCTGTATAGTCGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | TGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCACGGGAGGAGCTGTCTaGGAATATGGCAGCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: CESHVSFVDSNEMGDCGGTGGAV*EYGSCG Trigger: ACCGCAGCTGCCATATTCTCAGACAGCTCCTCCCGT...GCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTACTGACGCCCGTACCTaGTGCATTGAGAGCAGAGGC | + |
|
Preference number: 4 (lower is better) Translates to: ARTACESHVSFVDSNEMGTDART*CIESRG Trigger: GCCTCTGCTCTCAATGCAGCAGGTACGGGCGTCAGT...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAGCCACTCGATGGTACTaGAGGAGGAGGTGCGACTGG | + |
|
Preference number: 4 (lower is better) Translates to: EKARTACESHVSFVDSNEATRWY*RRRCDW Trigger: CCAGTCGCACCTCCTCCTGCAGTACCATCGAGTGGC...TTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGCCTGTGGCTGCGTGGTaGCCGGAGGGGAGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVPVAAW*PEGSQS Trigger: AGACTGGCTCCCCTCCGGCCACCACGCAGCCACAGG...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGTCCCCTGTGGCTGCGTaGTGGCCGGAGGGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVSPVAA*WPEGSQ Trigger: CTGGCTCCCCTCCGGCCACCACGCAGCCACAGGGGA...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | TCTAGGAAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCCTGTGTGGTCCCCTGTaGCTGCGTGGTGGCCGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKDKPHLFRQPMKHLHFLCGPL*LRGGRR Trigger: CCTCCGGCCACCACGCAGCCACAGGGGACCACACAG...GAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTTCCTAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | AAGCCAAAAGCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGGAGTTTCCTGGACACTaGGCTCGAGGGTGGCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: KPKAYECLILGRKREQRVEFPGH*ARGWPS Trigger: GGAGGGCCACCCTCGAGCCCAGTGTCCAGGAAACTC...CACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGGTCCCAGCTACCTGTCACCGTTGTGTCACTAACAGTTTTGTGTCTTCTGCTGACAGGGGAAGGCTaGATACCAGTTGCGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: PRSQLPVTVVSLTVLCLLLTGEG*IPVAAL Trigger: GAGTGCCGCAACTGGTATCCAGCCTTCCCCTGTCAG...CAGAAGACACAAAACTGTTAGTGACACAACGGTGACAGGTAGCTGGGACCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCAAAAGCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGGTCACTGGCTGGCCATaGCCTGGGGCTATCTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: KPKAYECLILGRKREQRVVTGWP*PGAICA Trigger: TGCGCAGATAGCCCCAGGCCATGGCCAGCCAGTGAC...CACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | CCTAGGTCCCAGCTACCTGTCACCGTTGTGTCACTAACAGTTTTGTGTCTTCTGGTGTTTGTACTGCTGTaGGCTGCCCTGGCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: PRSQLPVTVVSLTVLCLLVFVLL*AALAAG Trigger: TCCAGCTGCCAGGGCAGCCCACAGCAGTACAAACAC...CAGAAGACACAAAACTGTTAGTGACACAACGGTGACAGGTAGCTGGGACCTAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| 3UTR CAA 72 bp | CCCATTGCAGTCTTGTTTCTGGCCTCTCCGAGTTCTTaGAAGGGAAGGAGAAGAGAGCGCAGAATCCAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: PIAVLFLASPSS*KGRRRERRIQE Trigger: CTCCTGGATTCTGCGCTCTCTTCTCCTTCCCTTCAAAGAACTCGGAGAGGCCAGAAACAAGACTGCAATGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR TCA 90 bp | TCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGGCTTCATGCTGGCAGAGATCTaGGCCGGAGTAACGCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SHVSFVDSNEMGDCGGGFMLAEI*AGVTLV Trigger: AACTAGCGTTACTCCGGCTCAGATCTCTGCCAGCAT...GAAGCCGCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTTATGGCAGCTGCGGTTaGGCCAGGCTGGAAACAGAA | + |
|
Preference number: 4 (lower is better) Translates to: ARTACESHVSFVDSNEMGYGSCG*ARLETE Trigger: TTCTGTTTCCAGCCTGGCTCAACCGCAGCTGCCATA...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | TCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGGCTTCGTGTTAACTGTTGGTTaGTGCTGCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: SHVSFVDSNEMGDCGGGFVLTVG*CCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAACCAACAGTTAACAC...GAAGCCGCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTAGGCTGGATACCAGTTaGGGCACTCATGGTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: ARTACESHVSFVDSNEMGRLDTS*GTHGGL Trigger: CAAGCCACCATGAGTGCCGCAACTGGTATCCAGCCT...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACTGCCCATATTGTAACTaGTGGGGTGGTGCCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDCPYCN*WGGAPG Trigger: TCCAGGGGCACCACCCCAGCAGTTACAATATGGGCA...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCTTCTGATGGTTCAGAAAAGAGGGACAGTACTATCGTGTTTTATAAGCTTGCCTGGCCAATGGGCTaGCCAGCCGCCCCTGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VSSDGSEKRDSTIVFYKLAWPMG*PAAPAG Trigger: ACCTGCAGGGGCGGCTGGGCAGCCCATTGGCCAGGC...AAGCTTATAAAACACGATAGTACTGTCCCTCTTTTCTGAACCATCAGAAGACAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | CTCTGGGAGGAGAGAAGCACTGTTAGTGGACCGAGGGTTGTGCTGTCCTGTTCTCAAGGTACTCTGGGGTaGAATGACCAATTGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: LWEERSTVSGPRVVLSCSQGTLG*NDQLLW Trigger: CCACAACAATTGGTCATTGCACCCCAGAGTACCTTG...AGAACAGGACAGCACAACCCTCGGTCCACTAACAGTGCTTCTCTCCTCCCAGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| CDS-3UTR GCA 90 bp | TCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGGCTTCGATAGCTACCACACTTaGACCAGAGCTCTCGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SHVSFVDSNEMGDCGGGFDSYHT*TRALVL Trigger: GAGGACGAGAGCTCTGGTGCAAGTGTGGTAGCTATC...GAAGCCGCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGTCCCCTGTGGCTGCGTaGTGGCCGGAGGGGAGCCAG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVHFFKPKAYECLILGSPVAA*WPEGSQ Trigger: CTGGCTCCCCTCCGGCCACCACGCAGCCACAGGGGA...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | GTCACGGGGAGTTTACTTCGCAAGACTTCAGCAGCTAGATTCCGGGATTACACACTAAGTCAGTGGCCCTaGAAAGGGAGACGTCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLLRKTSAARFRDYTLSQWP*KGRRRG Trigger: TCCTCGACGTCTCCCTTTCCAGGGCCACTGACTTAG...TGTGTAATCCCGGAATCTAGCTGCTGAAGTCTTGCGAAGTAAACTCCCCGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | TCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGGCTTCTGGAGGTGGTGGGGATaGGCATTCCCATTGATCACA | + |
|
Preference number: 4 (lower is better) Translates to: SHVSFVDSNEMGDCGGGFWRWWG*AFPLIT Trigger: TGTGATCAATGGGAATGCCCATCCCCACCACCTCCA...GAAGCCGCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAACAGTTGCGGCACTCATaGTGGCTTGCAGAGGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: EKARTACESHVSFVDSNEQLRHS*WLAEGQ Trigger: CTGTCCCTCTGCAAGCCACCATGAGTGCCGCAACTG...TTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | AGAACGACTATACAGGTGAGGTGCAGAAACCCCTACTGGGAAATCCACTTCCTTTGGATTTTGAGTCACTaGCTGGCCATGGCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: RTTIQVRCRNPYWEIHFLWILSH*LAMAWG Trigger: GCCCCAGGCCATGGCCAGCCAGTGACTCAAAATCCA...AAGGAAGTGGATTTCCCAGTAGGGGTTTCTGCACCTCACCTGTATAGTCGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTACTCCCTGTGGCTaGGGAGGCACAGTTACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: AYECLILGRKREQRVSLTSTPCG*GGTVTK Trigger: CTTGGTAACTGTGCCTCCCCAGCCACAGGGAGTAGA...CGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GTCACGGGGAGTTTACTTCGCAAGACTTCAGCAGCTAGATTCCGGGATTACACATCTACTCCCTGTGGCTaGGGAGGCACAGTTACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLLRKTSAARFRDYTSTPCG*GGTVTK Trigger: CTTGGTAACTGTGCCTCCCCAGCCACAGGGAGTAGA...TGTGTAATCCCGGAATCTAGCTGCTGAAGTCTTGCGAAGTAAACTCCCCGTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GGACCAGCCAGAGATGAGCCAAGAGTACCTGCTAACACTTCAAGACTTGGGTTCCTCTGGCAGCCAGGGTaGAAACAAACCAAAGCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPARDEPRVPANTSRLGFLWQPG*KQTKAL Trigger: GAGAGCTTTGGTTTGTTTCCACCCTGGCTGCCAGAG...GAACCCAAGTCTTGAAGTGTTAGCAGGTACTCTTGGCTCATCTCTGGCTGGTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| CDS-3UTR TCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACTGCTGTTGTTGGAGCTaGTGCTGGCAGAGATCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDCCCWS*CWQRSE Trigger: CTCAGATCTCTGCCAGCATCAGCTCCAACAACAGCA...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | GCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGGAACTCCCTGATGAATaGTCCCGGTTGGAGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: AYECLILGRKREQRVSLTELPDE*SRLEQV Trigger: TACCTGCTCCAACCGGGATCATTCATCAGGGAGTTC...CGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | ATGTGGCTTCTCTCCACGCTGGCAGGGGAGAGAGAACGAGCTAGCGCTGGCATTGTGCAGCGCCCACATTaGGTACAAGTAATTTTAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MWLLSTLAGERERASAGIVQRPH*VQVILN Trigger: ATTTAAAATTACTTGTACTCAATGTGGGCGCTGCAC...AATGCCAGCGCTAGCTCGTTCTCTCTCCCCTGCCAGCGTGGAGAGAAGCCACAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134109.2 |
||
| CDS-3UTR GCA 90 bp | GAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAGGGAACATTGCCGGGTaGGCCATCTTCCTAGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: EKARTACESHVSFVDSNEGNIAG*AIFLAL Trigger: TAGTGCTAGGAAGATGGCGCACCCGGCAATGTTCCC...TTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGTCCCTGCGTGGAAGATaGAGCAGGAGGCGGCGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVSLRGR*SRRRRL Trigger: CAGCCGCCGCCTCCTGCTGCATCTTCCACGCAGGGA...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | TGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGAGAGATCTTCCGTGTaGGACTCATCCAGATCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: CESHVSFVDSNEMGDCGGERSSV*DSSRSS Trigger: CGACGATCTGGATGAGTCGCACACGGAAGATCTCTC...GCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGTGTTAACTGTTGGTTaGTGCTGCTGCTGCTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ACESHVSFVDSNEMGDCGVLTVG*CCCCCC Trigger: GCAGCAGCAGCAGCAGCAGCAACCAACAGTTAACAC...TCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | AGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGCCCATATTGTAACTaGTGGGGTGGTGCCCCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: RTACESHVSFVDSNEMGDCPYCN*WGGAPG Trigger: TCCAGGGGCACCACCCCAGCAGTTACAATATGGGCA...GTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | TTTGAAGGGAAGGAGAAGAGAGCGCAGAATCCAGGAGCAGCCCACTTTCCGAACACCATTGGTTGCTGCTaGCCATATTGTAACTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: FEGKEKRAQNPGAAHFPNTIGCC*PYCNCW Trigger: CCAGCAGTTACAATATGGGCAGCAGCAACCAATGGT...GTTCGGAAAGTGGGCTGCTCCTGGATTCTGCGCTCTCTTCTCCTTCCCTTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | TTTGAAGGGAAGGAGAAGAGAGCGCAGAATCCAGGAGCAGCCCACTTTCCGAACCCCAGAGGACAATGCTaGTTGAAATATTGGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FEGKEKRAQNPGAAHFPNPRGQC*LKYWLL Trigger: CAGCAGCCAATATTTCAAGCAGCATTGTCCTCTGGG...GTTCGGAAAGTGGGCTGCTCCTGGATTCTGCGCTCTCTTCTCCTTCCCTTCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTACTTGGGTAGAGGGCTaGTGTACTGCAGTGGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: ARTACESHVSFVDSNEMGTWVEG*CTAVGM Trigger: CATACCCACTGCAGTACAGCAGCCCTCTACCCAAGT...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCTTCTGATGGTTCAGAAAAGAGGGACAGTACTATCGTGTTTTATAAGCTTCCTGTGGCTGCGTGGTaGCCGGAGGGGAGCCAGTCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSDGSEKRDSTIVFYKLPVAAW*PEGSQS Trigger: AGACTGGCTCCCCTCCGGCCACCACGCAGCCACAGG...AAGCTTATAAAACACGATAGTACTGTCCCTCTTTTCTGAACCATCAGAAGACAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | AGGGTTGAAAAGGCACAGAGCTCCTCGGGGTCAATTAAACCATTCCTCAGACATGCTCACCTAAGTCAGTaGCCCTGGAAAGGGAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: RVEKAQSSSGSIKPFLRHAHLSQ*PWKGRR Trigger: ACGTCTCCCTTTCCAGGGCCACTGACTTAGGTGAGC...ATGTCTGAGGAATGGTTTAATTGACCCCGAGGAGCTCTGTGCCTTTTCAACCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | AAGCCAAAAGCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGCTGACAGGGGAAGGCTaGATACCAGTTGCGGCACTC | + |
|
Preference number: 4 (lower is better) Translates to: KPKAYECLILGRKREQRVLTGEG*IPVAAL Trigger: GAGTGCCGCAACTGGTATCCAGCCTTCCCCTGTCAG...CACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGCCATATTGTAACTGCTaGGGTGGTGCCCCTGGAAGA | + |
|
Preference number: 4 (lower is better) Translates to: AYECLILGRKREQRVSLTPYCNC*GGAPGR Trigger: TCTTCCAGGGGCACCACCCCAGCAGTTACAATATGG...CGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGACTGCGCAGGAACCATTaGTTGCTGCTGCCCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: ACESHVSFVDSNEMGDCGLRRNH*LLLPIL Trigger: CAATATGGGCAGCAGCAACCAATGGTTCCTGCGCAG...TCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGTGCTGTGGGCTGCCCTaGCAGCTGGATCCCCTGTGC | + |
|
Preference number: 4 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVCCGLP*QLDPLC Trigger: GCACAGGGGATCCAGCTGCCAGGGCAGCCCACAGCA...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTACCAAACTGCCATTTTaGGTGGCTGGGGGTTGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: ARTACESHVSFVDSNEMGTKLPF*VAGGCA Trigger: AGCACAACCCCCAGCCACCCAAAATGGCAGTTTGGT...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | CCTGACGTCAAAAGCTCTCCGTGGTCTTGGCTGTATCTGTGCTGTGGCTCTAGGCCATTTGGCTTCCAATaGCCTGAGCTAATGATTGTG | + |
|
Preference number: 4 (lower is better) Translates to: PDVKSSPWSWLYLCCGSRPFGFQ*PELMIV Trigger: CACAATCATTAGCTCAGGCCATTGGAAGCCAAATGG...CCTAGAGCCACAGCACAGATACAGCCAAGACCACGGAGAGCTTTTGACGTCAGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175984.2 |
||
| CDS-3UTR TCA 90 bp | GTGTCTTCTGATGGTTCAGAAAAGAGGGACAGTACTATCGTGTTTTATAAGCTTGGCTGTCCCTGCAGCTaGGCCTGCGAGAGGAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSSDGSEKRDSTIVFYKLGCPCS*ACERRF Trigger: GAACCTCCTCTCGCAGGCTCAGCTGCAGGGACAGCC...AAGCTTATAAAACACGATAGTACTGTCCCTCTTTTCTGAACCATCAGAAGACAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | GAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGCTGGCAGAGATCTaGGCCGGAGTAACGCTAGTT | + |
|
Preference number: 4 (lower is better) Translates to: EKARTACESHVSFVDSNEMLAEI*AGVTLV Trigger: AACTAGCGTTACTCCGGCTCAGATCTCTGCCAGCAT...TTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACTCTGAAGTTGGATTTTaGGTCACTGGCTGGCCATGG | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDSEVGF*VTGWPW Trigger: CCATGGCCAGCCAGTGACTCAAAATCCAACTTCAGA...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | TTTGAAGGGAAGGAGAAGAGAGCGCAGAATCCAGGAGCAGCCCACTTTCCGAACCTGCTGCACATACTCTaGAGTTGGATTTTGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: FEGKEKRAQNPGAAHFPNLLHIL*SWILSH Trigger: GTGACTCAAAATCCAACTTCAGAGTATGTGCAGCAG...GTTCGGAAAGTGGGCTGCTCCTGGATTCTGCGCTCTCTTCTCCTTCCCTTCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | AAGCCAAAAGCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGTGGATCCCCTGTGCCTaGGCCACAGGAATCACTGAT | + |
|
Preference number: 4 (lower is better) Translates to: KPKAYECLILGRKREQRVWIPCA*ATGITD Trigger: ATCAGTGATTCCTGTGGCTCAGGCACAGGGGATCCA...CACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | GCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGATTGTTGTGGAAGGCTTaGAGCACGGGTTTGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: ACESHVSFVDSNEMGDCGLLWKA*STGLNS Trigger: GGAGTTCAAACCCGTGCTTCAAGCCTTCCACAACAA...TCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | GCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTACTCTGGGGTGCAATaGCCAATTGTTGTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: AYECLILGRKREQRVSLTYSGVQ*PIVVEG Trigger: GCCTTCCACAACAATTGGTCATTGCACCCCAGAGTA...CGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACTACTCTGGGGTGCAATaGCCAATTGTTGTGGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDYSGVQ*PIVVEG Trigger: GCCTTCCACAACAATTGGTCATTGCACCCCAGAGTA...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | AGGGTTGAAAAGGCACAGAGCTCCTCGGGGTCAATTAAACCATTCCTCAGACATAAACCACTCCCACAGTaGTACCTGCAGCTAGGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: RVEKAQSSSGSIKPFLRHKPLPQ*YLQLGF Trigger: GAAGCCTAGCTGCAGGTATCACTGTGGGAGTGGTTT...ATGTCTGAGGAATGGTTTAATTGACCCCGAGGAGCTCTGTGCCTTTTCAACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCAAAAGCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGGGGAACATTGCCGGGTaGGCCATCTTCCTAGCACTA | + |
|
Preference number: 4 (lower is better) Translates to: KPKAYECLILGRKREQRVGNIAG*AIFLAL Trigger: TAGTGCTAGGAAGATGGCGCACCCGGCAATGTTCCC...CACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGCGCTGCCACCACCGCTaGCCCTTCGAGGGAACATTG | + |
|
Preference number: 4 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVRCHHR*PFEGTL Trigger: CAATGTTCCCTCGAAGGGGCAGCGGTGGTGGCAGCG...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCAAAAGCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGCTGGTTAGGAGAGACTaGCCCAGGTGTCTCAGCTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPKAYECLILGRKREQRVLVRRD*PRCLSF Trigger: GAAGCTGAGACACCTGGGGCAGTCTCTCCTAACCAG...CACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCAAAAGCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGGTTGTGTTTGTACTaGTGTGGGCTGCCCTGGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KPKAYECLILGRKREQRVRLCLY*CGLPWQ Trigger: CTGCCAGGGCAGCCCACAGCAGTACAAACACAACCT...CACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | GCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGATGGTACAGTGGACACTaGTGTTTGAGCCTGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: ACESHVSFVDSNEMGDCGWYSGH*CLSLAN Trigger: ATTGGCCAGGCTCAAACAGCAGTGTCCACTGTACCA...TCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | ATAAGCTTTGGTGACAGTTGTCGGTTTTGTATAAGGACTGCATCATCCCTCCCCCAGGGGCTGCTAGGCTaGTGCTACTCCCATCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: ISFGDSCRFCIRTASSLPQGLLG*CYSHLK Trigger: TTTCAGATGGGAGTAGCAGCAGCCTAGCAGCCCCTG...GGGGAGGGATGATGCAGTCCTTATACAAAACCGACAACTGTCACCAAAGCTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | TGTTTATTATCCTTTCCCACTCTCTCCAGAAGCTGGGTATTCTGTCTCCAAGGGCAGGGGCTGCTAGGCTaGTGCTACTCCCATCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: CLLSFPTLSRSWVFCLQGQGLLG*CYSHLK Trigger: TTTCAGATGGGAGTAGCAGCAGCCTAGCAGCCCCTG...CCCTTGGAGACAGAATACCCAGCTTCTGGAGAGAGTGGGAAAGGATAATAAACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175984.2 ENSMUST00000177471.2 |
||
| CDS-3UTR CCA 90 bp | AGAACGACTATACAGGTGAGGTGCAGAAACCCCTACTGGGAAATCCACTTCCTTCTGCGCAGGAACCATTaGTTGCTGCTGCCCATATTG | + |
|
Preference number: 4 (lower is better) Translates to: RTTIQVRCRNPYWEIHFLLRRNH*LLLPIL Trigger: CAATATGGGCAGCAGCAACCAATGGTTCCTGCGCAG...AAGGAAGTGGATTTCCCAGTAGGGGTTTCTGCACCTCACCTGTATAGTCGTTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | TTCCCACTCTCTCCAGAAGCTGGGTATTCTGTCTCCAAGGGTTCAGTGGAGAAAGCCATTTTGGGTGGCTaGGGGTTGTGCTATATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: FPLSPEAGYSVSKGSVEKAILGG*GLCYIL Trigger: CAGAATATAGCACAACCCCCAGCCACCCAAAATGGC...TTTCTCCACTGAACCCTTGGAGACAGAATACCCAGCTTCTGGAGAGAGTGGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000175984.2 |
||
| CDS-3UTR CCA 90 bp | TGTTTATTATCCTTTCCCACTCTCTCCAGAAGCTGGGTATTCTGTCTCCAAGGGAGCTCTCCGTGGTCTTaGCTGTATCTGTGCTGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: CLLSFPTLSRSWVFCLQGSSPWS*LYLCCG Trigger: GCCACAGCACAGATACAGCCAAGACCACGGAGAGCT...CCCTTGGAGACAGAATACCCAGCTTCTGGAGAGAGTGGGAAAGGATAATAAACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177471.2 |
||
| 3UTR CAA 72 bp | TCTGGGAGGAGAGAAGCACTGTTAGTGGACCGAGGGTaGTGCTGTCCTGTTCTCTACCAAACAACCAACAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGRREALLVDRG*CCPVLYQTTNK Trigger: TTTGTTGGTTGTTTGGTAGAGAACAGGACAGCACAACCCTCGGTCCACTAACAGTGCTTCTCTCCTCCCAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| CDS-3UTR TCA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGACGGGAGGAGCTGTCTaGGAATATGGCAGCTGCGGT | + |
|
Preference number: 4 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVTGGAV*EYGSCG Trigger: ACCGCAGCTGCCATATTCTCAGACAGCTCCTCCCGT...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | GCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGGGAGGAGCACCTTGCTaGATAACTGAAGGTGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: AYECLILGRKREQRVSLTGGAPC*ITEGVT Trigger: AGTTACACCTTCAGTTATTCAGCAAGGTGCTCCTCC...CGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | GTCACGGGGAGTTTACTTCGCAAGACTTCAGCAGCTAGATTCCGGGATTACACAGGAGGAGCACCTTGCTaGATAACTGAAGGTGTAACT | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLLRKTSAARFRDYTGGAPC*ITEGVT Trigger: AGTTACACCTTCAGTTATTCAGCAAGGTGCTCCTCC...TGTGTAATCCCGGAATCTAGCTGCTGAAGTCTTGCGAAGTAAACTCCCCGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | ACTAAGGCAGGACAACAAAGCTGTCATCATTCTACAGGAATTCAGAGTTCTGTGGCATTAAGGAGGCAGTaGCCACGACAGTGTCGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TKAGQQSCHHSTGIQSSVALRRQ*PRQCRL Trigger: CAGGCGACACTGTCGTGGTCACTGCCTCCTTAATGC...CACAGAACTCTGAATTCCTGTAGAATGATGACAGCTTTGTTGTCCTGCCTTAGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| CDS-3UTR GCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAGATTGTTCTCCTaGTCCAGCTGGGAGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDSRLFS*SSWEFF Trigger: GAAAAACTCCCAGCTGGAGCAGGAGAACAATCTGCT...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
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| CDS-3UTR GCA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTAGCAGATTGTTCTCCTaGTCCAGCTGGGAGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: ARTACESHVSFVDSNEMGSRLFS*SSWEFF Trigger: GAAAAACTCCCAGCTGGAGCAGGAGAACAATCTGCT...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCTTCTGATGGTTCAGAAAAGAGGGACAGTACTATCGTGTTTTATAAGCTTGGAGGCTGGGGTCCCTaGGTGGAAGATGCAGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSSDGSEKRDSTIVFYKLGGWGP*VEDAAG Trigger: TCCTGCTGCATCTTCCACGCAGGGACCCCAGCCTCC...AAGCTTATAAAACACGATAGTACTGTCCCTCTTTTCTGAACCATCAGAAGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGTACTGCAGGAGGAGGTaGGACTGGCACACCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVYCRRR*DWHTTI Trigger: GATGGTGGTGTGCCAGTCGCACCTCCTCCTGCAGTA...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | GTCACGGGGAGTTTACTTCGCAAGACTTCAGCAGCTAGATTCCGGGATTACACACTGCCCAGAGGACAATaGTGCTTGAAATATTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLLRKTSAARFRDYTLPRGQ*CLKYWL Trigger: CAGCCAATATTTCAAGCAGCATTGTCCTCTGGGCAG...TGTGTAATCCCGGAATCTAGCTGCTGAAGTCTTGCGAAGTAAACTCCCCGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACCTGCCCAGAGGACAATaGTGCTTGAAATATTGGCTG | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDLPRGQ*CLKYWL Trigger: CAGCCAATATTTCAAGCAGCATTGTCCTCTGGGCAG...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | TCTAGGAAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCCCCGTGGAACTGGACTaGCCAGAGGACAATGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: SRKDKPHLFRQPMKHLHFPVELD*PEDNAA Trigger: AGCAGCATTGTCCTCTGGGCAGTCCAGTTCCACGGG...GAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTTCCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | GCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTGCAGTGGGTATGTTTaGCTGTTGACCGATACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: AYECLILGRKREQRVSLTCSGYV*LLTDTC Trigger: GCAAGTATCGGTCAACAGGCAAACATACCCACTGCA...CGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCAAAAGCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGAGGGCTGCTGTACTaGAGTGGGTATGTTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: KPKAYECLILGRKREQRVRGLLY*SGYVCL Trigger: CAGGCAAACATACCCACTGCAGTACAGCAGCCCTCT...CACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACGGTGTCTCAGCTTCCTaGAAGTTATTCAGAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDGVSAS*KLFRVS Trigger: GGAGACTCTGAATAACTTCCAGGAAGCTGAGACACC...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GTCACGGGGAGTTTACTTCGCAAGACTTCAGCAGCTAGATTCCGGGATTACACACACAACGTTCTGTTGTaGAAGGTGAGGCAAATGAGG | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLLRKTSAARFRDYTHNVLL*KVRQMR Trigger: CCTCATTTGCCTCACCTTCCACAACAGAACGTTGTG...TGTGTAATCCCGGAATCTAGCTGCTGAAGTCTTGCGAAGTAAACTCCCCGTGAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | AGGGTTGAAAAGGCACAGAGCTCCTCGGGGTCAATTAAACCATTCCTCAGACATCGATGTGTTAACTGTTaGTTGCTGCTGCTGCTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: RVEKAQSSSGSIKPFLRHRCVNC*LLLLLL Trigger: CAGCAGCAGCAGCAGCAACCAACAGTTAACACATCG...ATGTCTGAGGAATGGTTTAATTGACCCCGAGGAGCTCTGTGCCTTTTCAACCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAGCTGCTGTACTGCAGTaGGTATGTTTGCCTGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EKARTACESHVSFVDSNEAAVLQ*VCLPVD Trigger: GTCAACAGGCAAACATACCCACTGCAGTACAGCAGC...TTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTACTGAAGGTGTAACTTaGGTAGAGGGCTGCTGTACT | + |
|
Preference number: 4 (lower is better) Translates to: ARTACESHVSFVDSNEMGTEGVT*VEGCCT Trigger: AGTACAGCAGCCCTCTACCCAAGTTACACCTTCAGT...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | TTTATTATCCTTTCCCACTCTCTCCAGAAGCTGGGTATTCTGTCTCCAAGGGTTGGTTTCTACTCCCTGTaGCTGGGGAGGCACAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: FIILSHSLQKLGILSPRVGFYSL*LGRHSY Trigger: GTAACTGTGCCTCCCCAGCCACAGGGAGTAGAAACC...AACCCTTGGAGACAGAATACCCAGCTTCTGGAGAGAGTGGGAAAGGATAATAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| CDS-3UTR CCA 90 bp | GTCACGGGGAGTTTACTTCGCAAGACTTCAGCAGCTAGATTCCGGGATTACACAAACTGCCATTTTGGGTaGCTGGGGGTTGTGCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLLRKTSAARFRDYTNCHFG*LGVVLY Trigger: ATATAGCACAACCCCCAGCCACCCAAAATGGCAGTT...TGTGTAATCCCGGAATCTAGCTGCTGAAGTCTTGCGAAGTAAACTCCCCGTGAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTAACTGCCATTTTGGGTaGCTGGGGGTTGTGCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: ARTACESHVSFVDSNEMGNCHFG*LGVVLY Trigger: ATATAGCACAACCCCCAGCCACCCAAAATGGCAGTT...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | ATCCTTGTGTCTTCTAGACATAGTGCATGGGTCCGTTCACCACTGCCTTCCACAAACTGCCATTTTGGGTaGCTGGGGGTTGTGCTATAT | + |
|
Preference number: 4 (lower is better) Translates to: ILVSSRHSAWVRSPLPSTNCHFG*LGVVLY Trigger: ATATAGCACAACCCCCAGCCACCCAAAATGGCAGTT...TGTGGAAGGCAGTGGTGAACGGACCCATGCACTATGTCTAGAAGACACAAGGAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000175984.2 |
||
| CDS-3UTR TCA 90 bp | TGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCCTGCTGCACATACTCTaGAGTTGGATTTTGAGTCAC | + |
|
Preference number: 4 (lower is better) Translates to: CESHVSFVDSNEMGDCGGLLHIL*SWILSH Trigger: GTGACTCAAAATCCAACTTCAGAGTATGTGCAGCAG...GCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | AGAACGACTATACAGGTGAGGTGCAGAAACCCCTACTGGGAAATCCACTTCCTTTGGCTTCCAATGGCCTaGGCTAATGATTGTGTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RTTIQVRCRNPYWEIHFLWLPMA*ANDCVE Trigger: CTCTACACAATCATTAGCTCAGGCCATTGGAAGCCA...AAGGAAGTGGATTTCCCAGTAGGGGTTTCTGCACCTCACCTGTATAGTCGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | CCTAGGTCCCAGCTACCTGTCACCGTTGTGTCACTAACAGTTTTGTGTCTTCTGGATAGCTACCACACTTaGACCAGAGCTATTGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: PRSQLPVTVVSLTVLCLLDSYHT*TRAIVK Trigger: CTTGACAATAGCTCTGGTGCAAGTGTGGTAGCTATC...CAGAAGACACAAAACTGTTAGTGACACAACGGTGACAGGTAGCTGGGACCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022587.10 |
||
| CDS-3UTR GCA 90 bp | AGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACAGCAGATTGTTCTCCTaGTCCAGCTGGGAGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: RTACESHVSFVDSNEMGDSRLFS*SSWEFF Trigger: GAAAAACTCCCAGCTGGAGCAGGAGAACAATCTGCT...GTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR GCA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGCCTTCGAGGGAACATTaGCGGGTGCGCCATCTTCCT | + |
|
Preference number: 4 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVPSREH*RVRHLP Trigger: AGGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGG...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCTTCTGATGGTTCAGAAAAGAGGGACAGTACTATCGTGTTTTATAAGCTTGACGCCCGTACCTGCTaGATTGAGAGCAGAGGCGCT | + |
|
Preference number: 4 (lower is better) Translates to: VSSDGSEKRDSTIVFYKLDARTC*IESRGA Trigger: AGCGCCTCTGCTCTCAATGCAGCAGGTACGGGCGTC...AAGCTTATAAAACACGATAGTACTGTCCCTCTTTTCTGAACCATCAGAAGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTAAGAAACGGTACCATTaGCCATGCCACTCAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: ARTACESHVSFVDSNEMGKKRYH*PCHSRY Trigger: GTATCTTGAGTGGCATGGGCAATGGTACCGTTTCTT...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048371.15 |
||
| CDS-3UTR GCA 90 bp | AGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACGGAACCATTGGTTGCTaGTGCCCATATTGTAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTACESHVSFVDSNEMGDGTIGC*CPYCNC Trigger: GCAGTTACAATATGGGCAGCAGCAACCAATGGTTCC...GTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | AGAACGACTATACAGGTGAGGTGCAGAAACCCCTACTGGGAAATCCACTTCCTTGGAACCATTGGTTGCTaGTGCCCATATTGTAACTGC | + |
|
Preference number: 4 (lower is better) Translates to: RTTIQVRCRNPYWEIHFLGTIGC*CPYCNC Trigger: GCAGTTACAATATGGGCAGCAGCAACCAATGGTTCC...AAGGAAGTGGATTTCCCAGTAGGGGTTTCTGCACCTCACCTGTATAGTCGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | AGAACGACTATACAGGTGAGGTGCAGAAACCCCTACTGGGAAATCCACTTCCTTGCAGGAACCATTGGTTaGTGCTGCCCATATTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: RTTIQVRCRNPYWEIHFLAGTIG*CCPYCN Trigger: GTTACAATATGGGCAGCAGCAACCAATGGTTCCTGC...AAGGAAGTGGATTTCCCAGTAGGGGTTTCTGCACCTCACCTGTATAGTCGTTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCTTCTGATGGTTCAGAAAAGAGGGACAGTACTATCGTGTTTTATAAGCTTCGAGCTGCTCCGGACTaGCCAGCGTCTTCAGCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: VSSDGSEKRDSTIVFYKLRAAPD*PASSAD Trigger: ATCTGCTGAAGACGCTGGCCAGTCCGGAGCAGCTCG...AAGCTTATAAAACACGATAGTACTGTCCCTCTTTTCTGAACCATCAGAAGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGCATCTGAGTTCCGCCTaGCGCAAGAGGCTGTCCCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVHFFKPKAYECLILGHLSSA*RKRLSL Trigger: CAGGGACAGCCTCTTGCGCCAGGCGGAACTCAGATG...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGCTAAGTCAGTGGCCCTaGAAAGGGAGACGTCGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVLSQWP*KGRRRG Trigger: TCCTCGACGTCTCCCTTTCCAGGGCCACTGACTTAG...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GTCACGGGGAGTTTACTTCGCAAGACTTCAGCAGCTAGATTCCGGGATTACACAGCTTCCTGTAGTACTTaGAGTACGGATGTTCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLLRKTSAARFRDYTASCST*STDVRH Trigger: ATGACGAACATCCGTACTCCAAGTACTACAGGAAGC...TGTGTAATCCCGGAATCTAGCTGCTGAAGTCTTGCGAAGTAAACTCCCCGTGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGTGGATTTTGAGTCACTaGCTGGCCATGGCCTGGGGC | + |
|
Preference number: 4 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVWILSH*LAMAWG Trigger: GCCCCAGGCCATGGCCAGCCAGTGACTCAAAATCCA...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGGGTTTCTACTCCCTGTaGCTGGGGAGGCACAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVGFYSL*LGRHSY Trigger: GTAACTGTGCCTCCCCAGCCACAGGGAGTAGAAACC...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | TCTAGGAAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCGCAGAGGACTGCCTGTaGGCAACTGCTGGGAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: SRKDKPHLFRQPMKHLHFAEDCL*ATAGKQ Trigger: TTGTTTCCCAGCAGTTGCCCACAGGCAGTCCTCTGC...GAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTTCCTAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACTGTGACATCTGTGACTaGGAAATACTCTGTGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDCDICD*EILCGI Trigger: TATGCCACAGAGTATTTCTCAGTCACAGATGTCACA...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | TGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCACCTTGCTGAATAACTaGAGGTGTAACTTGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: CESHVSFVDSNEMGDCGGTLLNN*RCNLGR Trigger: TCTACCCAAGTTACACCTTCAGTTATTCAGCAAGGT...GCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | ATTTGTTTATTATCCTTTCCCACTCTCTCCAGAAGCTGGGTATTCTGTCTCCAAGAGAAAGTGGAGCCCTaGCGTCAAAAGCTCTCCGTG | + |
|
Preference number: 4 (lower is better) Translates to: ICLLSFPTLSRSWVFCLQEKVEP*RQKLSV Trigger: CACGGAGAGCTTTTGACGTCAGGGCTCCACTTTCTC...TTGGAGACAGAATACCCAGCTTCTGGAGAGAGTGGGAAAGGATAATAAACAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177471.2 |
||
| CDS-3UTR GCA 90 bp | GCTAGCGCTGGCATTTCTGACTGTATGAAGAGCAATCAGCACCGTCTGGATTTAGATAGCTACCACACTTaGACCAGAGCTATTGTCAAG | + |
|
Preference number: 4 (lower is better) Translates to: ASAGISDCMKSNQHRLDLDSYHT*TRAIVK Trigger: CTTGACAATAGCTCTGGTGCAAGTGTGGTAGCTATC...TAAATCCAGACGGTGCTGATTGCTCTTCATACAGTCAGAAATGCCAGCGCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000134109.2 |
||
| CDS-3UTR GCA 90 bp | TTTGAAGGGAAGGAGAAGAGAGCGCAGAATCCAGGAGCAGCCCACTTTCCGAACATTAGTTCTTTGATCTaGTCCTTCAGAACTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: FEGKEKRAQNPGAAHFPNISSLI*SFRTST Trigger: AGTGGAAGTTCTGAAGGAGCAGATCAAAGAACTAAT...GTTCGGAAAGTGGGCTGCTCCTGGATTCTGCGCTCTCTTCTCCTTCCCTTCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 5 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR GCA 90 bp | AAGCCAAAAGCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGCAGATTGTTCTCCTaGTCCAGCTGGGAGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: KPKAYECLILGRKREQRVSRLFS*SSWEFF Trigger: GAAAAACTCCCAGCTGGAGCAGGAGAACAATCTGCT...CACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR GCA 90 bp | TCTAGGAAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCGAGAGATCTTCCGTGTaGGACTCATCCAGATCGTCG | + |
|
Preference number: 4 (lower is better) Translates to: SRKDKPHLFRQPMKHLHFERSSV*DSSRSS Trigger: CGACGATCTGGATGAGTCGCACACGGAAGATCTCTC...GAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTTCCTAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGTACTGCAGGAGGAGGTaGGACTGGCACACCACCATC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVHFFKPKAYECLILGYCRRR*DWHTTI Trigger: GATGGTGGTGTGCCAGTCGCACCTCCTCCTGCAGTA...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | ATAAGCTTTGGTGACAGTTGTCGGTTTTGTATAAGGACTGCATCATCCCTCCCCATTGGCTGCTGCTGCTaGTGCACATACTCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISFGDSCRFCIRTASSLPIGCCC*CTYSEV Trigger: AACTTCAGAGTATGTGCAGCAGCAGCAGCAGCCAAT...GGGGAGGGATGATGCAGTCCTTATACAAAACCGACAACTGTCACCAAAGCTTAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGCCCGTGGAACTGGACTaGCCAGAGGACAATGCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQLVHFFKPKAYECLILGPVELD*PEDNAA Trigger: AGCAGCATTGTCCTCTGGGCAGTCCAGTTCCACGGG...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGTGGAGGTGGTGGGGATaGGCATTCCCATTGATCACA | + |
|
Preference number: 4 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVWRWWG*AFPLIT Trigger: TGTGATCAATGGGAATGCCCATCCCCACCACCTCCA...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | AGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACGCTTCCTGTAGTACTTaGAGTACGGATGTTCGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RTACESHVSFVDSNEMGDASCST*STDVRH Trigger: ATGACGAACATCCGTACTCCAAGTACTACAGGAAGC...GTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAACTGAGAAATACTCTGTaGCATACTAACCGCCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: EKARTACESHVSFVDSNELRNTL*HTNRRN Trigger: ATTGCGGCGGTTAGTATGCCACAGAGTATTTCTCAG...TTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGTTGCGGCACTCATGGTaGCTTGCAGAGGGACAGGCT | + |
|
Preference number: 4 (lower is better) Translates to: TQLVHFFKPKAYECLILGLRHSW*LAEGQA Trigger: AGCCTGTCCCTCTGCAAGCCACCATGAGTGCCGCAA...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GTGTCTTCTGATGGTTCAGAAAAGAGGGACAGTACTATCGTGTTTTATAAGCTTGTGTTTGTACTGCTGTaGGCTGCCCTGGCAGCTGGA | + |
|
Preference number: 4 (lower is better) Translates to: VSSDGSEKRDSTIVFYKLVFVLL*AALAAG Trigger: TCCAGCTGCCAGGGCAGCCCACAGCAGTACAAACAC...AAGCTTATAAAACACGATAGTACTGTCCCTCTTTTCTGAACCATCAGAAGACAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGGGTTTCTACTCCCTGTaGCTGGGGAGGCACAGTTAC | + |
|
Preference number: 4 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVGFYSL*LGRHSY Trigger: GTAACTGTGCCTCCCCAGCCACAGGGAGTAGAAACC...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | AGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGACATCTGTGACTaGGAAATACTCTGTGGCATA | + |
|
Preference number: 4 (lower is better) Translates to: RTACESHVSFVDSNEMGDCDICD*EILCGI Trigger: TATGCCACAGAGTATTTCTCAGTCACAGATGTCACA...GTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | TCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGGCTTCATTAGTTCTTTGATCTaGTCCTTCAGAACTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: SHVSFVDSNEMGDCGGGFISSLI*SFRTST Trigger: AGTGGAAGTTCTGAAGGAGCAGATCAAAGAACTAAT...GAAGCCGCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR GCA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGAGGCTGGATACCAGTTaGGGCACTCATGGTGGCTTG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVHFFKPKAYECLILGRLDTS*GTHGGL Trigger: CAAGCCACCATGAGTGCCGCAACTGGTATCCAGCCT...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGGATAGCTACCACACTTaGACCAGAGCTCTCGTCCTC | + |
|
Preference number: 4 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVDSYHT*TRALVL Trigger: GAGGACGAGAGCTCTGGTGCAAGTGTGGTAGCTATC...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | GAATACAACAGGATGTCTAGTAAATCCCAGTTTCAGTTCCAAATCCAACTTTTGCACGACAGTGTCGCCTaGCTTCACTTCCTCCTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: EYNRMSSKSQFQFQIQLLHDSVA*LHFLLA Trigger: AGCCAGGAGGAAGTGAAGGCAGGCGACACTGTCGTG...CAAAAGTTGGATTTGGAACTGAAACTGGGATTTACTAGACATCCTGTTGTATTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| CDS-3UTR CCA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGGCTCACCTAAGTCAGTaGCCCTGGAAAGGGAGACGT | + |
|
Preference number: 4 (lower is better) Translates to: TQLVHFFKPKAYECLILGAHLSQ*PWKGRR Trigger: ACGTCTCCCTTTCCAGGGCCACTGACTTAGGTGAGC...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | AGCTGCTTTGAAAGACAAGACTCTCAAGCTTCCTCTATTTCAGTCTTCAGAATATCTACTCCCTGTGGCTaGGGAGGCACAGTTACCAAG | + |
|
Preference number: 4 (lower is better) Translates to: SCFERQDSQASSISVFRISTPCG*GGTVTK Trigger: CTTGGTAACTGTGCCTCCCCAGCCACAGGGAGTAGA...TATTCTGAAGACTGAAATAGAGGAAGCTTGAGAGTCTTGTCTTTCAAAGCAGCT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| CDS-3UTR CCA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGGCCATTTTGGGTGGCTaGGGGTTGTGCTATATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVAILGG*GLCYIL Trigger: CAGAATATAGCACAACCCCCAGCCACCCAAAATGGC...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | TGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCTCTCTATTAGTTCTTTaGTCTGCTCCTTCAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: CESHVSFVDSNEMGDCGGSLLVL*SAPSEL Trigger: AAGTTCTGAAGGAGCAGATCAAAGAACTAATAGAGA...GCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR TCA 90 bp | GCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGATCTCTATTAGTTCTTTaGTCTGCTCCTTCAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: ACESHVSFVDSNEMGDCGSLLVL*SAPSEL Trigger: AAGTTCTGAAGGAGCAGATCAAAGAACTAATAGAGA...TCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR TCA 90 bp | GCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTATTAGTTCTTTaGTCTGCTCCTTCAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: AYECLILGRKREQRVSLTSLLVL*SAPSEL Trigger: AAGTTCTGAAGGAGCAGATCAAAGAACTAATAGAGA...CGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR TCA 90 bp | GTGTCTTCTGATGGTTCAGAAAAGAGGGACAGTACTATCGTGTTTTATAAGCTTGAACTCCCTGATGAATaGTCCCGGTTGGAGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: VSSDGSEKRDSTIVFYKLELPDE*SRLEQV Trigger: TACCTGCTCCAACCGGGATCATTCATCAGGGAGTTC...AAGCTTATAAAACACGATAGTACTGTCCCTCTTTTCTGAACCATCAGAAGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR GCA 90 bp | GTCACGGGGAGTTTACTTCGCAAGACTTCAGCAGCTAGATTCCGGGATTACACAATTAGTTCTTTGATCTaGTCCTTCAGAACTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: VTGSLLRKTSAARFRDYTISSLI*SFRTST Trigger: AGTGGAAGTTCTGAAGGAGCAGATCAAAGAACTAAT...TGTGTAATCCCGGAATCTAGCTGCTGAAGTCTTGCGAAGTAAACTCCCCGTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
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| CDS-3UTR GCA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACATTAGTTCTTTGATCTaGTCCTTCAGAACTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: NTGEKARTACESHVSFVDISSLI*SFRTST Trigger: AGTGGAAGTTCTGAAGGAGCAGATCAAAGAACTAAT...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR GCA 90 bp | GCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGATTAGTTCTTTGATCTaGTCCTTCAGAACTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: AYECLILGRKREQRVSLTISSLI*SFRTST Trigger: AGTGGAAGTTCTGAAGGAGCAGATCAAAGAACTAAT...CGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR GCA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGAGCAGATTGTTCTCCTaGTCCAGCTGGGAGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVSRLFS*SSWEFF Trigger: GAAAAACTCCCAGCTGGAGCAGGAGAACAATCTGCT...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
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| CDS-3UTR GCA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGCGGTACCATTGCCCATaGCACTCAAGATACTCGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVRYHCP*HSRYSN Trigger: ATTCGAGTATCTTGAGTGGCATGGGCAATGGTACCG...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048371.15 |
||
| CDS-3UTR GCA 90 bp | CCTAGGTCCCAGCTACCTGTCACCGTTGTGTCACTAACAGTTTTGTGTCTTCTGTCTCATAGAATTCTGTaGAAGTCCATCGACCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: PRSQLPVTVVSLTVLCLLSHRIL*KSIDLF Trigger: AAAAAGGTCGATGGACTTGCACAGAATTCTATGAGA...CAGAAGACACAAAACTGTTAGTGACACAACGGTGACAGGTAGCTGGGACCTAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR GCA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGTGTAGTGACTCAGTGTaGTCACACTACTGCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVCSDSV*SHYCSQ Trigger: CTGTGAGCAGTAGTGTGAGCACACTGAGTCACTACA...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | TCTAGGAAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCGCAGGAACCATTGGTTaGTGCTGCCCATATTGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: SRKDKPHLFRQPMKHLHFAGTIG*CCPYCN Trigger: GTTACAATATGGGCAGCAGCAACCAATGGTTCCTGC...GAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTTCCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR GCA 90 bp | TCTAGGAAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCATTGGCTGCTGCTGCTaGTGCACATACTCTGAAGTT | + |
|
Preference number: 4 (lower is better) Translates to: SRKDKPHLFRQPMKHLHFIGCCC*CTYSEV Trigger: AACTTCAGAGTATGTGCAGCAGCAGCAGCAGCCAAT...GAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTTCCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGTGGTACAGTGGACACTaGTGTTTGAGCCTGGCCAAT | + |
|
Preference number: 4 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVWYSGH*CLSLAN Trigger: ATTGGCCAGGCTCAAACAGCAGTGTCCACTGTACCA...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR GCA 90 bp | TCTAGGAAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCTGCAGTGGGTATGTTTaGCTGTTGACCGATACTTGC | + |
|
Preference number: 4 (lower is better) Translates to: SRKDKPHLFRQPMKHLHFCSGYV*LLTDTC Trigger: GCAAGTATCGGTCAACAGGCAAACATACCCACTGCA...GAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTTCCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | GTGTCTTCTGATGGTTCAGAAAAGAGGGACAGTACTATCGTGTTTTATAAGCTTAGAGGGCTGCTGTACTaGAGTGGGTATGTTTGCCTG | + |
|
Preference number: 4 (lower is better) Translates to: VSSDGSEKRDSTIVFYKLRGLLY*SGYVCL Trigger: CAGGCAAACATACCCACTGCAGTACAGCAGCCCTCT...AAGCTTATAAAACACGATAGTACTGTCCCTCTTTTCTGAACCATCAGAAGACAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR GCA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGACTTGGGTAGAGGGCTaGTGTACTGCAGTGGGTATG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVHFFKPKAYECLILGTWVEG*CTAVGM Trigger: CATACCCACTGCAGTACAGCAGCCCTCTACCCAAGT...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | TCTAGGAAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCCAAGGTACTCTGGGGTaGAATGACCAATTGTTGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SRKDKPHLFRQPMKHLHFQGTLG*NDQLLW Trigger: CCACAACAATTGGTCATTGCACCCCAGAGTACCTTG...GAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTTCCTAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR GCA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGGGTGGCTGGGGGTTGTaGTATATTCTGTGGTGGAAC | + |
|
Preference number: 4 (lower is better) Translates to: TQLVHFFKPKAYECLILGGGWGL*YILWWN Trigger: GTTCCACCACAGAATATAGCACAACCCCCAGCCACC...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 44% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CCA 90 bp | GAGCCTTTCCATTTTCAGACCAAAAATAAACCCGAGTATATCTTGGAAGTTTGTACTTCCTCCTGGCTCTaGCAGCCAGGGTGGAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: EPFHFQTKNKPEYILEVCTSSWL*QPGWKQ Trigger: TTGTTTCCACCCTGGCTGCCAGAGCCAGGAGGAAGT...ACAAACTTCCAAGATATACTCGGGTTTATTTTTGGTCTGAAAATGGAAAGGCTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
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| CDS-3UTR TCA 90 bp | AGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTCTCTATTAGTTCTTTaGTCTGCTCCTTCAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: RTACESHVSFVDSNEMGDSLLVL*SAPSEL Trigger: AAGTTCTGAAGGAGCAGATCAAAGAACTAATAGAGA...GTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
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| CDS-3UTR GCA 90 bp | AGGGTTGAAAAGGCACAGAGCTCCTCGGGGTCAATTAAACCATTCCTCAGACATACCAGATCCATAGCTTaGTCTATTTTGTTGTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: RVEKAQSSSGSIKPFLRHTRSIA*SILLSI Trigger: TATCGACAACAAAATAGAGCAAGCTATGGATCTGGT...ATGTCTGAGGAATGGTTTAATTGACCCCGAGGAGCTCTGTGCCTTTTCAACCCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 |
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| CDS-3UTR GCA 90 bp | GAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAACCAGATCCATAGCTTaGTCTATTTTGTTGTCGATA | + |
|
Preference number: 4 (lower is better) Translates to: EKARTACESHVSFVDSNETRSIA*SILLSI Trigger: TATCGACAACAAAATAGAGCAAGCTATGGATCTGGT...TTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 |
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| CDS-3UTR GCA 90 bp | GAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATTAGTTCTTTGATCTaGTCCTTCAGAACTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: EKARTACESHVSFVDSNEISSLI*SFRTST Trigger: AGTGGAAGTTCTGAAGGAGCAGATCAAAGAACTAAT...TTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
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| CDS-3UTR GCA 90 bp | AGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACATTAGTTCTTTGATCTaGTCCTTCAGAACTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: RTACESHVSFVDSNEMGDISSLI*SFRTST Trigger: AGTGGAAGTTCTGAAGGAGCAGATCAAAGAACTAAT...GTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
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| CDS-3UTR GCA 90 bp | AGGGTTGAAAAGGCACAGAGCTCCTCGGGGTCAATTAAACCATTCCTCAGACATTCTCATAGAATTCTGTaGAAGTCCATCGACCTTTTT | + |
|
Preference number: 4 (lower is better) Translates to: RVEKAQSSSGSIKPFLRHSHRIL*KSIDLF Trigger: AAAAAGGTCGATGGACTTGCACAGAATTCTATGAGA...ATGTCTGAGGAATGGTTTAATTGACCCCGAGGAGCTCTGTGCCTTTTCAACCCT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR GCA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGACCATTGGTTGCTGCTaGCCATATTGTAACTGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVTIGCC*PYCNCW Trigger: CCAGCAGTTACAATATGGGCAGCAGCAACCAATGGT...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR GCA 90 bp | GAGGTAGGATGTTTACCAGTTGAAAGAAATTTGTTTATTATCCTTTCCCACTCTCAGGGGCTGCTAGGCTaGTGCTACTCCCATCTGAAA | + |
|
Preference number: 4 (lower is better) Translates to: EVGCLPVERNLFIILSHSQGLLG*CYSHLK Trigger: TTTCAGATGGGAGTAGCAGCAGCCTAGCAGCCCCTG...AGAGTGGGAAAGGATAATAAACAAATTTCTTTCAACTGGTAAACATCCTACCTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175984.2 ENSMUST00000177471.2 |
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| CDS-3UTR CCA 90 bp | TCTAGGAAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCCTGAGAAATACTCTGTaGCATACTAACCGCCGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: SRKDKPHLFRQPMKHLHFLRNTL*HTNRRN Trigger: ATTGCGGCGGTTAGTATGCCACAGAGTATTTCTCAG...GAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTTCCTAGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR CCA 90 bp | GTGTCTTCTGATGGTTCAGAAAAGAGGGACAGTACTATCGTGTTTTATAAGCTTGCTGCTGTACTGCAGTaGGTATGTTTGCCTGTTGAC | + |
|
Preference number: 4 (lower is better) Translates to: VSSDGSEKRDSTIVFYKLAAVLQ*VCLPVD Trigger: GTCAACAGGCAAACATACCCACTGCAGTACAGCAGC...AAGCTTATAAAACACGATAGTACTGTCCCTCTTTTCTGAACCATCAGAAGACAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR CCA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGGCCATTTTGGGTGGCTaGGGGTTGTGCTATATTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVHFFKPKAYECLILGAILGG*GLCYIL Trigger: CAGAATATAGCACAACCCCCAGCCACCCAAAATGGC...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGACCTTGCTGAATAACTaGAGGTGTAACTTGGGTAGA | + |
|
Preference number: 4 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVTLLNN*RCNLGR Trigger: TCTACCCAAGTTACACCTTCAGTTATTCAGCAAGGT...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR TCA 90 bp | GAGGTAGGATGTTTACCAGTTGAAAGAAATTTGTTTATTATCCTTTCCCACTCTGAACTCCCTGATGAATaGTCCCGGTTGGAGCAGGTA | + |
|
Preference number: 4 (lower is better) Translates to: EVGCLPVERNLFIILSHSELPDE*SRLEQV Trigger: TACCTGCTCCAACCGGGATCATTCATCAGGGAGTTC...AGAGTGGGAAAGGATAATAAACAAATTTCTTTCAACTGGTAAACATCCTACCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| CDS-3UTR GCA 90 bp | GTGTCTTCTGATGGTTCAGAAAAGAGGGACAGTACTATCGTGTTTTATAAGCTTAGCAGATTGTTCTCCTaGTCCAGCTGGGAGTTTTTC | + |
|
Preference number: 4 (lower is better) Translates to: VSSDGSEKRDSTIVFYKLSRLFS*SSWEFF Trigger: GAAAAACTCCCAGCTGGAGCAGGAGAACAATCTGCT...AAGCTTATAAAACACGATAGTACTGTCCCTCTTTTCTGAACCATCAGAAGACAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR GCA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGTGTAGTGACTCAGTGTaGTCACACTACTGCTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: TQLVHFFKPKAYECLILGCSDSV*SHYCSQ Trigger: CTGTGAGCAGTAGTGTGAGCACACTGAGTCACTACA...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR TCA 90 bp | GAGGTAGGATGTTTACCAGTTGAAAGAAATTTGTTTATTATCCTTTCCCACTCTTTGTTGTGGAAGGCTTaGAGCACGGGTTTGAACTCC | + |
|
Preference number: 4 (lower is better) Translates to: EVGCLPVERNLFIILSHSLLWKA*STGLNS Trigger: GGAGTTCAAACCCGTGCTTCAAGCCTTCCACAACAA...AGAGTGGGAAAGGATAATAAACAAATTTCTTTCAACTGGTAAACATCCTACCTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| CDS-3UTR TCA 90 bp | TCTAGGAAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCTCTCTATTAGTTCTTTaGTCTGCTCCTTCAGAACTT | + |
|
Preference number: 4 (lower is better) Translates to: SRKDKPHLFRQPMKHLHFSLLVL*SAPSEL Trigger: AAGTTCTGAAGGAGCAGATCAAAGAACTAATAGAGA...GAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTTCCTAGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR TCA 90 bp | GAGCCTTTCCATTTTCAGACCAAAAATAAACCCGAGTATATCTTGGAAGTTTGTGTCAGCGGTAGCACCTaGTTTGTAACAGAAATAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EPFHFQTKNKPEYILEVCVSGST*FVTEIV Trigger: CACTATTTCTGTTACAAATCAGGTGCTACCGCTGAC...ACAAACTTCCAAGATATACTCGGGTTTATTTTTGGTCTGAAAATGGAAAGGCTC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| CDS-3UTR GCA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGATTAGTTCTTTGATCTaGTCCTTCAGAACTTCCACT | + |
|
Preference number: 4 (lower is better) Translates to: TQLVHFFKPKAYECLILGISSLI*SFRTST Trigger: AGTGGAAGTTCTGAAGGAGCAGATCAAAGAACTAAT...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS GCA 90 bp | GAGGCGCTGCCACCACCGCTGCCCCTTCGAGGGAACATTGCCGGGTaGGCCATCTTCCTAGCACTAATGTCTGCAGCAGCGGCCGCCGCG | + |
|
Preference number: 5 (lower is better) Translates to: EALPPPLPLRGNIAG*AIFLALMSAAAAAA Trigger: CGCGGCGGCCGCTGCTGCAGACATTAGTGCTAGGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGGGGCAGCGGTGGTGGCAGCGCCTC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTTGGAGAGCCACACCTaGAAGACCTGGAGGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: HEGEPPELSEAGWAAGEGLESHT*KTWRRW Trigger: CCAGCGCCTCCAGGTCTTCAAGGTGTGGCTCTCCAA...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS GCA 90 bp | TCGAGGGAACATTGCCGGGTGCGCCATCTTCCTAGCACTAATGTCTaGAGCAGCGGCCGCCGCGGCGGTGGACTCCGGCGGCTGGTGCAT | + |
|
Preference number: 5 (lower is better) Translates to: SREHCRVRHLPSTNV*SSGRRGGGLRRLVH Trigger: ATGCACCAGCCGCCGGAGTCCACCGCCGCGGCGGCCGCTGCTGCAGACATTAGTGCTAGGAAGATGGCGCACCCGGCAATGTTCCCTCGA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 90 bp | TGCGAGAGGAGGTTCAGGCTTTGTGGAGGCGGAGGCTGGGGTCCCTaGGTGGAAGATGCAGCAGGAGGCGGCGGCTGGAGCAGCGAAGGA | + |
|
Preference number: 5 (lower is better) Translates to: CERRFRLCGGGGWGP*VEDAAGGGGWSSEG Trigger: TCCTTCGCTGCTCCAGCCGCCGCCTCCTGCTGCATCTTCCACGCAGGGACCCCAGCCTCCGCCTCCACAAAGCCTGAACCTCCTCTCGCA 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR CAA 90 bp | CGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTGATATGGCAGCTGCGGTaGAGCCAGGCTGGAAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RRRAARALRSRVGGWGGLIWQLR*SQAGNR Trigger: TCTGTTTCCAGCCTGGCTCAACCGCAGCTGCCATAT...CAACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCG 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS TCA 90 bp | TGTGGAGCAGGGCTACTGAACTCTAGCTGTTGGAGAGCCACACCTTaGAGACCTGGAGGCGCTGGTGGTAGCGGCGGCTGCTGCGGCGCC | + |
|
Preference number: 5 (lower is better) Translates to: CGAGLLNSSCWRATP*RPGGAGGSGGCCGA Trigger: GGCGCCGCAGCAGCCGCCGCTACCACCAGCGCCTCCAGGTCTTCAAGGTGTGGCTCTCCAACAGCTAGAGTTCAGTAGCCCTGCTCCACA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 90 bp | GAGAGCAGAGGCGCTGCCACCACCGCTGCCCCTTCGAGGGAACATTaGCGGGTGCGCCATCTTCCTAGCACTAATGTCTGCAGCAGCGGC | + |
|
Preference number: 5 (lower is better) Translates to: ESRGAATTAAPSREH*RVRHLPSTNVCSSG Trigger: GCCGCTGCTGCAGACATTAGTGCTAGGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGGGGCAGCGGTGGTGGCAGCGCCTCTGCTCTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 90 bp | GTTCAGGCTTTGTGGAGGCGGAGGCTGGGGTCCCTGCGTGGAAGATaGAGCAGGAGGCGGCGGCTGGAGCAGCGAAGGAGGAGGAAAATC | + |
|
Preference number: 5 (lower is better) Translates to: VQALWRRRLGSLRGR*SRRRRLEQRRRRKI Trigger: GATTTTCCTCCTCCTTCGCTGCTCCAGCCGCCGCCTCCTGCTGCATCTTCCACGCAGGGACCCCAGCCTCCGCCTCCACAAAGCCTGAAC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 90 bp | CAATGGGCTGCCCAGCCGCCCCTGCAGGTTGTGTTTGTACTGCTGTaGGCTGCCCTGGCAGCTGGATCCCCTGTGCCTGAGCCACAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: QWAAQPPLQVVFVLL*AALAAGSPVPEPQE Trigger: TTCCTGTGGCTCAGGCACAGGGGATCCAGCTGCCAGGGCAGCCCACAGCAGTACAAACACAACCTGCAGGGGCGGCTGGGCAGCCCATTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR CAA 90 bp | CACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGTTGTGTTAACTGTTGGTaGCTGCTGCTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: HEGEPPELSEAGWAAGEGCVNCW*LLLLLL Trigger: CAGCAGCAGCAGCAGCAGCAACCAACAGTTAACACA...ACCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 90 bp | GGACACTGCTGTTTGAGCCTGGCCAATGGGCTGCCCAGCCGCCCCTaGAGGTTGTGTTTGTACTGCTGTGGGCTGCCCTGGCAGCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: GHCCLSLANGLPSRP*RLCLYCCGLPWQLD Trigger: ATCCAGCTGCCAGGGCAGCCCACAGCAGTACAAACACAACCTGCAGGGGCGGCTGGGCAGCCCATTGGCCAGGCTCAAACAGCAGTGTCC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS TCA 90 bp | GTTTGTACTGCTGTGGGCTGCCCTGGCAGCTGGATCCCCTGTGCCTaGGCCACAGGAATCACTGATATTCCTGCCCCCGTGCCCGTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: VCTAVGCPGSWIPCA*ATGITDIPAPVPVE Trigger: TTCCACGGGCACGGGGGCAGGAATATCAGTGATTCCTGTGGCTCAGGCACAGGGGATCCAGCTGCCAGGGCAGCCCACAGCAGTACAAAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | CCACGAAGGCGAGCCGCCCGAGCTCTCAGAAGCAGGGTGGGCGGCTGGGGAGGGCACCAGATCCATAGCTaGCTCTATTTTGTTGTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: PRRRAARALRSRVGGWGGHQIHS*LYFVVD Trigger: ATCGACAACAAAATAGAGCAAGCTATGGATCTGGTG...CCCTCCCCAGCCGCCCACCCTGCTTCTGAGAGCTCGGGCGGCTCGCCTTCGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 |
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| CDS GCA 90 bp | AAAATCTTCAGAAGATGGAGCAGCACCACTGACGCCCGTACCTGCTaGATTGAGAGCAGAGGCGCTGCCACCACCGCTGCCCCTTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KIFRRWSSTTDARTC*IESRGAATTAAPSR Trigger: CCTCGAAGGGGCAGCGGTGGTGGCAGCGCCTCTGCTCTCAATGCAGCAGGTACGGGCGTCAGTGGTGCTGCTCCATCTTCTGAAGATTTT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 90 bp | AGGAAAATCTTCAGAAGATGGAGCAGCACCACTGACGCCCGTACCTaGTGCATTGAGAGCAGAGGCGCTGCCACCACCGCTGCCCCTTCG | + |
|
Preference number: 5 (lower is better) Translates to: RKIFRRWSSTTDART*CIESRGAATTAAPS Trigger: CGAAGGGGCAGCGGTGGTGGCAGCGCCTCTGCTCTCAATGCAGCAGGTACGGGCGTCAGTGGTGCTGCTCCATCTTCTGAAGATTTTCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 90 bp | TTGACCGATACTTGCAATCTGACCGCCAGTTGGTACAGTGGACACTaGTGTTTGAGCCTGGCCAATGGGCTGCCCAGCCGCCCCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: LTDTCNLTASWYSGH*CLSLANGLPSRPCR Trigger: CCTGCAGGGGCGGCTGGGCAGCCCATTGGCCAGGCTCAAACAGCAGTGTCCACTGTACCAACTGGCGGTCAGATTGCAAGTATCGGTCAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 90 bp | CACACCACCATCAGAACTTCCAGTTGTAGAGAGTTTCCTGGACACTaGGCTCGAGGGTGGCCCTCCGGGAATGGATGGACCGGCCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: HTTIRTSSCREFPGH*ARGWPSGNGWTGHS Trigger: GCTGTGGCCGGTCCATCCATTCCCGGAGGGCCACCCTCGAGCCCAGTGTCCAGGAAACTCTCTACAACTGGAAGTTCTGATGGTGGTGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 90 bp | GCAGTGACCACGACAGTGTCGCCTGCCTTCACTTCCTCCTGGCTCTaGCAGCCAGGGTGGAAACAAACCAAAGCTCTCGTCCTCGCCATC | + |
|
Preference number: 5 (lower is better) Translates to: AVTTTVSPAFTSSWL*QPGWKQTKALVLAI Trigger: GATGGCGAGGACGAGAGCTTTGGTTTGTTTCCACCCTGGCTGCCAGAGCCAGGAGGAAGTGAAGGCAGGCGACACTGTCGTGGTCACTGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
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| CDS TCA 90 bp | CCATCTGAAACTGCTGACATTCCCCCACTGTCACCACTCATAGTCTaGGGTAAGCCGCCTAAGGAGGGCTCCGCTGGGCGCCTGGCATCT | + |
|
Preference number: 5 (lower is better) Translates to: PSETADIPPLSPLIV*GKPPKEGSAGRLAS Trigger: AGATGCCAGGCGCCCAGCGGAGCCCTCCTTAGGCGGCTTACCTCAGACTATGAGTGGTGACAGTGGGGGAATGTCAGCAGTTTCAGATGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000175984.2 ENSMUST00000176581.2 ENSMUST00000177471.2 |
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| CDS CCA 90 bp | TGCCCCTGGAAGAGGAGTTTGCACGGGAGGAGCTGTCTGAGAATATaGCAGCTGCGGTTGAGCCAGGCTGGAAACAGAAGGCTGCTGACC | + |
|
Preference number: 5 (lower is better) Translates to: CPWKRSLHGRSCLRI*QLRLSQAGNRRLLT Trigger: GGTCAGCAGCCTTCTGTTTCCAGCCTGGCTCAACCGCAGCTGCCATATTCTCAGACAGCTCCTCCCGTGCAAACTCCTCTTCCAGGGGCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR CAA 90 bp | CTGCCACGGGGACAGATAGCGTCCATGAGGGCTCTGCTAGAGGACTTCCTTTGCCATCCACCAGGGGTGTaGTCAGCGGTAGCACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LPRGQIASMRALLEDFLCHPPGV*SAVAPS Trigger: TGAAGGTGCTACCGCTGACAACACCCCTGGTGGATG...GCAAAGGAAGTCCTCTAGCAGAGCCCTCATGGACGCTATCTGTCCCCGTGGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000175984.2 ENSMUST00000177471.2 |
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| CDS GCA 90 bp | CCACTAGTGCTCTCCCTCTCCGAGGACGATGCTTCCGTGGGGGTTTaGTTCACCGTCTCCACCACTTTATTGACGGCCACGCCTTCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: PLVLSLSEDDASVGV*FTVSTTLLTATPSV Trigger: TACAGAAGGCGTGGCCGTCAATAAAGTGGTGGAGACGGTGAAGCAAACCCCCACGGAAGCATCGTCCTCGGAGAGGGAGAGCACTAGTGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 90 bp | GCTATCTGCGCAGGAACCATTGGTTGCTGCTGCCCATATTGTAACTaGTGGGGTGGTGCCCCTGGAAGAGGAGTTTGCACGGGAGGAGCT | + |
|
Preference number: 5 (lower is better) Translates to: AICAGTIGCCCPYCN*WGGAPGRGVCTGGA Trigger: AGCTCCTCCCGTGCAAACTCCTCTTCCAGGGGCACCACCCCAGCAGTTACAATATGGGCAGCAGCAACCAATGGTTCCTGCGCAGATAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 90 bp | GCGGTAGCACCTTCAACGGGAAGAGAGAAGCAGGGGCTGCTAGGCTaGTGCTACTCCCATCTGAAACTGCTGACATTCCCCCACTGTCAC | + |
|
Preference number: 5 (lower is better) Translates to: AVAPSTGREKQGLLG*CYSHLKLLTFPHCH Trigger: GTGACAGTGGGGGAATGTCAGCAGTTTCAGATGGGAGTAGCAGCAGCCTAGCAGCCCCTGCTTCTCTCTTCCCGTTGAAGGTGCTACCGC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000175984.2 ENSMUST00000176581.2 ENSMUST00000177471.2 |
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| CDS CCA 90 bp | ATCTGCGCAGGAACCATTGGTTGCTGCTGCCCATATTGTAACTGCTaGGGTGGTGCCCCTGGAAGAGGAGTTTGCACGGGAGGAGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: ICAGTIGCCCPYCNC*GGAPGRGVCTGGAV Trigger: GACAGCTCCTCCCGTGCAAACTCCTCTTCCAGGGGCACCACCCCAGCAGTTACAATATGGGCAGCAGCAACCAATGGTTCCTGCGCAGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS TCA 90 bp | GCCCCCGTGCCCGTGGAACTGGACTGCCCAGAGGACAATGCTGCTTaGAATATTGGCTGCTGCTGCTGCTGCACATACTCTGAAGTTGGA | + |
|
Preference number: 5 (lower is better) Translates to: APVPVELDCPEDNAA*NIGCCCCCTYSEVG Trigger: TCCAACTTCAGAGTATGTGCAGCAGCAGCAGCAGCCAATATTTCAAGCAGCATTGTCCTCTGGGCAGTCCAGTTCCACGGGCACGGGGGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 90 bp | TCCCCTGTGCCTGAGCCACAGGAATCACTGATATTCCTGCCCCCGTaGCCGTGGAACTGGACTGCCCAGAGGACAATGCTGCTTGAAATA | + |
|
Preference number: 5 (lower is better) Translates to: SPVPEPQESLIFLPP*PWNWTAQRTMLLEI Trigger: TATTTCAAGCAGCATTGTCCTCTGGGCAGTCCAGTTCCACGGGCACGGGGGCAGGAATATCAGTGATTCCTGTGGCTCAGGCACAGGGGA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 90 bp | GTAGCACCTTCAACGGGAAGAGAGAAGCAGGGGCTGCTAGGCTGCTaGTACTCCCATCTGAAACTGCTGACATTCCCCCACTGTCACCAC | + |
|
Preference number: 5 (lower is better) Translates to: VAPSTGREKQGLLGC*YSHLKLLTFPHCHH Trigger: GTGGTGACAGTGGGGGAATGTCAGCAGTTTCAGATGGGAGTAGCAGCAGCCTAGCAGCCCCTGCTTCTCTCTTCCCGTTGAAGGTGCTAC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 5 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000175984.2 ENSMUST00000176581.2 ENSMUST00000177471.2 |
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| CDS CCA 90 bp | TGCTGGGAAACAACCCCTTGGGCCACGGTTTCTACTCCCTGTGGCTaGGGAGGCACAGTTACCAAGGTACTCTGGGGTGCAATGACCAAT | + |
|
Preference number: 5 (lower is better) Translates to: CWETTPWATVSTPCG*GGTVTKVLWGAMTN Trigger: ATTGGTCATTGCACCCCAGAGTACCTTGGTAACTGTGCCTCCCCAGCCACAGGGAGTAGAAACCGTGGCCCAAGGGGTTGTTTCCCAGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000176886.2 |
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| CDS-3UTR CAA 90 bp | CCTAGGTCCCAGCTACCTGTCACCGTTGTGTCACTAACAGTTTTGTGTCTTCTGGAGGAGGTTCAGGCTTaGTGGAGGCGGAGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: PRSQLPVTVVSLTVLCLLEEVQA*WRRRLG Trigger: CCCCAGCCTCCGCCTCCACAAAGCCTGAACCTCCTC...CAGAAGACACAAAACTGTTAGTGACACAACGGTGACAGGTAGCTGGGACCTAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 90 bp | GTGAGGCAAATGAGGCTGAGGAAGGTGGGGCTGGTTAGGAGAGACTaGCCCAGGTGTCTCAGCTTCCTGGAAGTTATTCAGAGTCTCCTC | + |
|
Preference number: 5 (lower is better) Translates to: VRQMRLRKVGLVRRD*PRCLSFLEVIQSLL Trigger: GAGGAGACTCTGAATAACTTCCAGGAAGCTGAGACACCTGGGGCAGTCTCTCCTAACCAGCCCCACCTTCCTCAGCCTCATTTGCCTCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 90 bp | ACTGCTCACAGAACTCCCACTAGTGCTCTCCCTCTCCGAGGACGATaGTTCCGTGGGGGTTTGCTTCACCGTCTCCACCACTTTATTGAC | + |
|
Preference number: 5 (lower is better) Translates to: TAHRTPTSALPLRGR*FRGGLLHRLHHFID Trigger: GTCAATAAAGTGGTGGAGACGGTGAAGCAAACCCCCACGGAAGCATCGTCCTCGGAGAGGGAGAGCACTAGTGGGAGTTCTGTGAGCAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 90 bp | TCAGAGTCTCCTCTGAGGAGCTTCGTTCAGGCTCACCTAAGTCAGTaGCCCTGGAAAGGGAGACGTCGAGGATCTCGGAAGAGGAGAGAT | + |
|
Preference number: 5 (lower is better) Translates to: SESPLRSFVQAHLSQ*PWKGRRRGSRKRRD Trigger: ATCTCTCCTCTTCCGAGATCCTCGACGTCTCCCTTTCCAGGGCCACTGACTTAGGTGAGCCTGAACGAAGCTCCTCAGAGGAGACTCTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 90 bp | AGGTGGGGCTGGTTAGGAGAGACTGCCCCAGGTGTCTCAGCTTCCTaGAAGTTATTCAGAGTCTCCTCTGAGGAGCTTCGTTCAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: RWGWLGETAPGVSAS*KLFRVSSEELRSGS Trigger: TGAGCCTGAACGAAGCTCCTCAGAGGAGACTCTGAATAACTTCCAGGAAGCTGAGACACCTGGGGCAGTCTCTCCTAACCAGCCCCACCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 90 bp | GAGCCACAGGAATCACTGATATTCCTGCCCCCGTGCCCGTGGAACTaGACTGCCCAGAGGACAATGCTGCTTGAAATATTGGCTGCTGCT | + |
|
Preference number: 5 (lower is better) Translates to: EPQESLIFLPPCPWN*TAQRTMLLEILAAA Trigger: AGCAGCAGCCAATATTTCAAGCAGCATTGTCCTCTGGGCAGTCCAGTTCCACGGGCACGGGGGCAGGAATATCAGTGATTCCTGTGGCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 90 bp | GTGCCTGAGCCACAGGAATCACTGATATTCCTGCCCCCGTGCCCGTaGAACTGGACTGCCCAGAGGACAATGCTGCTTGAAATATTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: VPEPQESLIFLPPCP*NWTAQRTMLLEILA Trigger: AGCCAATATTTCAAGCAGCATTGTCCTCTGGGCAGTCCAGTTCCACGGGCACGGGGGCAGGAATATCAGTGATTCCTGTGGCTCAGGCAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 90 bp | GGGTATGTTTGCCTGTTGACCGATACTTGCAATCTGACCGCCAGTTaGTACAGTGGACACTGCTGTTTGAGCCTGGCCAATGGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: GYVCLLTDTCNLTAS*YSGHCCLSLANGLP Trigger: GGGCAGCCCATTGGCCAGGCTCAAACAGCAGTGTCCACTGTACCAACTGGCGGTCAGATTGCAAGTATCGGTCAACAGGCAAACATACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR CAA 90 bp | GCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGCCCTTCGAGGGAACATaGCCGGGTGCGCCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: AYECLILGRKREQRVSLTPFEGT*PGAPSS Trigger: GGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGGG...CGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR CAA 90 bp | AGGGTTGAAAAGGCACAGAGCTCCTCGGGGTCAATTAAACCATTCCTCAGACATGAGGAGGTTCAGGCTTaGTGGAGGCGGAGGCTGGGG | + |
|
Preference number: 5 (lower is better) Translates to: RVEKAQSSSGSIKPFLRHEEVQA*WRRRLG Trigger: CCCCAGCCTCCGCCTCCACAAAGCCTGAACCTCCTC...ATGTCTGAGGAATGGTTTAATTGACCCCGAGGAGCTCTGTGCCTTTTCAACCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS-3UTR CAA 90 bp | TCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGGCTTCCCCTGCAGGTTGTGTTaGTACTGCTGTGGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SHVSFVDSNEMGDCGGGFPCRLC*YCCGLP Trigger: GGGCAGCCCACAGCAGTACAAACACAACCTGCAGGG...GAAGCCGCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGGGAAGGAGAAGAGAGCGCAGAATCCAGGAGCAGCCCACTTTCCGAACCATCCACCAGGGGTGTaGTCAGCGGTAGCACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: FEGKEKRAQNPGAAHFPNHPPGV*SAVAPS Trigger: TGAAGGTGCTACCGCTGACAACACCCCTGGTGGATG...GTTCGGAAAGTGGGCTGCTCCTGGATTCTGCGCTCTCTTCTCCTTCCCTTCAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS TCA 90 bp | CTCGATGTGTTAACTGTTGGTTGCTGCTGCTGCTGCTGCTGCTGCTaGCTGGAAACCACTCCCACAGTGATACCTGCAGCTAGGCTTCCT | + |
|
Preference number: 5 (lower is better) Translates to: LDVLTVGCCCCCCCC*LETTPTVIPAARLP Trigger: AGGAAGCCTAGCTGCAGGTATCACTGTGGGAGTGGTTTCCAGTCAGCAGCAGCAGCAGCAGCAGCAGCAACCAACAGTTAACACATCGAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | GTGGGGATGTGGCTTCTCTCCACGCTGGCAGGGGAGAGAGAACGAGCTAGCGCTGCTTGCTCTATTTTGTaGTCGATAGCTACCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: VGMWLLSTLAGERERASAACSIL*SIATTL Trigger: AAGTGTGGTAGCTATCGACAACAAAATAGAGCAAGC...AGCGCTAGCTCGTTCTCTCTCCCCTGCCAGCGTGGAGAGAAGCCACATCCCCAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000134109.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTTGAAAAGGCACAGAGCTCCTCGGGGTCAATTAAACCATTCCTCAGACATCCCTTCGAGGGAACATaGCCGGGTGCGCCATCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: RVEKAQSSSGSIKPFLRHPFEGT*PGAPSS Trigger: GGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGGG...ATGTCTGAGGAATGGTTTAATTGACCCCGAGGAGCTCTGTGCCTTTTCAACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTTTGGAGAGCCACACCTaGAAGACCTGGAGGCGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARTACESHVSFVDSNEMGLESHT*KTWRRW Trigger: CCAGCGCCTCCAGGTCTTCAAGGTGTGGCTCTCCAA...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACGGCACTCATGGTGGCTaGCAGAGGGACAGGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: NTGEKARTACESHVSFVDGTHGG*QRDRLK Trigger: CTTCAGCCTGTCCCTCTGCAAGCCACCATGAGTGCC...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | TGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCCCCTGGAAGAGGAGTTaGCACGGGAGGAGCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: CESHVSFVDSNEMGDCGGPWKRS*HGRSCL Trigger: CAGACAGCTCCTCCCGTGCAAACTCCTCTTCCAGGG...GCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGGTCCCAGCTACCTGTCACCGTTGTGTCACTAACAGTTTTGTGTCTTCTGCCCTGCAGGTTGTGTTaGTACTGCTGTGGGCTGCCC | + |
|
Preference number: 5 (lower is better) Translates to: PRSQLPVTVVSLTVLCLLPCRLC*YCCGLP Trigger: GGGCAGCCCACAGCAGTACAAACACAACCTGCAGGG...CAGAAGACACAAAACTGTTAGTGACACAACGGTGACAGGTAGCTGGGACCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGGTCCCAGCTACCTGTCACCGTTGTGTCACTAACAGTTTTGTGTCTTCTGAGCCGCCCCTGCAGGTaGTGTTTGTACTGCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: PRSQLPVTVVSLTVLCLLSRPCR*CLYCCG Trigger: CCCACAGCAGTACAAACACAACCTGCAGGGGCGGCT...CAGAAGACACAAAACTGTTAGTGACACAACGGTGACAGGTAGCTGGGACCTAGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCCGCCCCTGCAGGTaGTGTTTGTACTGCTGTGGG | + |
|
Preference number: 5 (lower is better) Translates to: NTGEKARTACESHVSFVDSRPCR*CLYCCG Trigger: CCCACAGCAGTACAAACACAACCTGCAGGGGCGGCT...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AGGTGGGCTGGCTCATCCTTGTGTCTTCTAGACATAGTGCATGGGTCCGTTCACAAGCTCTCCGTGGTCTaGGCTGTATCTGTGCTGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RWAGSSLCLLDIVHGSVHKLSVV*AVSVLW Trigger: CCACAGCACAGATACAGCCAAGACCACGGAGAGCTT...GTGAACGGACCCATGCACTATGTCTAGAAGACACAAGGATGAGCCAGCCCACCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000177471.2 |
||
| CDS TCA 90 bp | CTCGATGTGTTAACTGTTGGTTGCTGCTGCTGCTGCTGCTGCTGCTaGCTGGAAACCACTCCCACAGTGATACCTGCAGCTGCATTAAGG | + |
|
Preference number: 5 (lower is better) Translates to: LDVLTVGCCCCCCCC*LETTPTVIPAAALR Trigger: CCTTAATGCAGCTGCAGGTATCACTGTGGGAGTGGTTTCCAGTCAGCAGCAGCAGCAGCAGCAGCAGCAACCAACAGTTAACACATCGAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048371.15 |
||
| CDS GCA 90 bp | GGGCTGCTGTACTGCAGTGGGTATGTTTGCCTGTTGACCGATACTTaGAATCTGACCGCCAGTTGGTACAGTGGACACTGCTGTTTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: GLLYCSGYVCLLTDT*NLTASWYSGHCCLS Trigger: GCTCAAACAGCAGTGTCCACTGTACCAACTGGCGGTCAGATTGCAAGTATCGGTCAACAGGCAAACATACCCACTGCAGTACAGCAGCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS GCA 90 bp | CTGCTGCTGCTGCTGCTGACTGGAAACCACTCCCACAGTGATACCTaGAGCTGCATTAAGGACACTGTTAGCAACAGGAGAGGAAGAAAC | + |
|
Preference number: 5 (lower is better) Translates to: LLLLLLTGNHSHSDT*SCIKDTVSNRRGRN Trigger: GTTTCTTCCTCTCCTGTTGCTAACAGTGTCCTTAATGCAGCTGCAGGTATCACTGTGGGAGTGGTTTCCAGTCAGCAGCAGCAGCAGCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048371.15 |
||
| CDS-3UTR CAA 90 bp | GGCTTCTCTCCACGCTGGCAGGGGAGAGAGAACGAGCTAGCGCTGGCATTTCTGATAGCTTGCTCTATTTaGTTGTCGATAGCTACCACA | + |
|
Preference number: 5 (lower is better) Translates to: GFSPRWQGRENELALAFLIACSI*LSIATT Trigger: TGTGGTAGCTATCGACAACAAAATAGAGCAAGCTAT...CAGAAATGCCAGCGCTAGCTCGTTCTCTCTCCCCTGCCAGCGTGGAGAGAAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000134109.2 |
||
| CDS-3UTR CAA 90 bp | TCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGGCTTCTGTGTTAACTGTTGGTaGCTGCTGCTGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: SHVSFVDSNEMGDCGGGFCVNCW*LLLLLL Trigger: CAGCAGCAGCAGCAGCAGCAACCAACAGTTAACACA...GAAGCCGCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | GCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAAAGGCTGGATACCAGTaGCGGCACTCATGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: ACESHVSFVDSNEMGDCGKAGYQ*RHSWWL Trigger: AAGCCACCATGAGTGCCGCAACTGGTATCCAGCCTT...TCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGGGAAGGAGAAGAGAGCGCAGAATCCAGGAGCAGCCCACTTTCCGAACATGCTGCTTGAAATATaGGCTGCTGCTGCTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: FEGKEKRAQNPGAAHFPNMLLEI*AAAAAA Trigger: TGCAGCAGCAGCAGCAGCCAATATTTCAAGCAGCAT...GTTCGGAAAGTGGGCTGCTCCTGGATTCTGCGCTCTCTTCTCCTTCCCTTCAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AGAACGACTATACAGGTGAGGTGCAGAAACCCCTACTGGGAAATCCACTTCCTTAGTGGACACTGCTGTTaGAGCCTGGCCAATGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: RTTIQVRCRNPYWEIHFLSGHCC*SLANGL Trigger: CAGCCCATTGGCCAGGCTCAAACAGCAGTGTCCACT...AAGGAAGTGGATTTCCCAGTAGGGGTTTCTGCACCTCACCTGTATAGTCGTTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTCCTGGCATCTTCCATTaGGCTTCCAATGGCCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ARTACESHVSFVDSNEMGPGIFH*ASNGLS Trigger: GCTCAGGCCATTGGAAGCCAAATGGAAGATGCCAGG...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS TCA 90 bp | CAATGCTGCTTGAAATATTGGCTGCTGCTGCTGCTGCACATACTCTaGAGTTGGATTTTGAGTCACTGGCTGGCCATGGCCTGGGGCTAT | + |
|
Preference number: 5 (lower is better) Translates to: QCCLKYWLLLLLHIL*SWILSHWLAMAWGY Trigger: ATAGCCCCAGGCCATGGCCAGCCAGTGACTCAAAATCCAACTTCAGAGTATGTGCAGCAGCAGCAGCAGCCAATATTTCAAGCAGCATTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS TCA 90 bp | TACCAAGGTACTCTGGGGTGCAATGACCAATTGTTGTGGAAGGCTTaGAGCACGGGTTTGAACTCCCTGATGAATGATCCCGGTTGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: YQGTLGCNDQLLWKA*STGLNSLMNDPGWS Trigger: GCTCCAACCGGGATCATTCATCAGGGAGTTCAAACCCGTGCTTCAAGCCTTCCACAACAATTGGTCATTGCACCCCAGAGTACCTTGGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000176886.2 |
||
| CDS GCA 90 bp | AGGTGTAACTTGGGTAGAGGGCTGCTGTACTGCAGTGGGTATGTTTaGCTGTTGACCGATACTTGCAATCTGACCGCCAGTTGGTACAGT | + |
|
Preference number: 5 (lower is better) Translates to: RCNLGRGLLYCSGYV*LLTDTCNLTASWYS Trigger: ACTGTACCAACTGGCGGTCAGATTGCAAGTATCGGTCAACAGGCAAACATACCCACTGCAGTACAGCAGCCCTCTACCCAAGTTACACCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS CCA 90 bp | CTTCACCGTCTCCACCACTTTATTGACGGCCACGCCTTCTGTAGCTaGCACAGCGTTTTCCTTCTCATAGAATTCTGTGCAAGTCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: LHRLHHFIDGHAFCS*HSVFLLIEFCASPS Trigger: CGATGGACTTGCACAGAATTCTATGAGAAGGAAAACGCTGTGCCAGCTACAGAAGGCGTGGCCGTCAATAAAGTGGTGGAGACGGTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | ATAAGCTTTGGTGACAGTTGTCGGTTTTGTATAAGGACTGCATCATCCCTCCCCTCCTCCGCGATGCTGTaGTTGGAGCTGATGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: ISFGDSCRFCIRTASSLPSSAML*LELMLA Trigger: TGCCAGCATCAGCTCCAACAACAGCATCGCGGAGGA...GGGGAGGGATGATGCAGTCCTTATACAAAACCGACAACTGTCACCAAAGCTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGGGAAGGAGAAGAGAGCGCAGAATCCAGGAGCAGCCCACTTTCCGAACGATCACAACGTTCTGTaGTGGAAGGTGAGGCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: FEGKEKRAQNPGAAHFPNDHNVL*WKVRQM Trigger: CATTTGCCTCACCTTCCACAACAGAACGTTGTGATC...GTTCGGAAAGTGGGCTGCTCCTGGATTCTGCGCTCTCTTCTCCTTCCCTTCAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACAAGGCTGGATACCAGTaGCGGCACTCATGGTGGCTT | + |
|
Preference number: 5 (lower is better) Translates to: RTACESHVSFVDSNEMGDKAGYQ*RHSWWL Trigger: AAGCCACCATGAGTGCCGCAACTGGTATCCAGCCTT...GTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACATATGGCAGCTGCGGTaGAGCCAGGCTGGAAACAGA | + |
|
Preference number: 5 (lower is better) Translates to: RTACESHVSFVDSNEMGDIWQLR*SQAGNR Trigger: TCTGTTTCCAGCCTGGCTCAACCGCAGCTGCCATAT...GTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS TCA 90 bp | GTTGGAGCAGGTAGGACTACTTGTGAAGATGGAGGAGCACCTTGCTaGATAACTGAAGGTGTAACTTGGGTAGAGGGCTGCTGTACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: VGAGRTTCEDGGAPC*ITEGVTWVEGCCTA Trigger: TGCAGTACAGCAGCCCTCTACCCAAGTTACACCTTCAGTTATTCAGCAAGGTGCTCCTCCATCTTCACAAGTAGTCCTACCTGCTCCAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGCCCTGGAAGAGGAGTTaGCACGGGAGGAGCTGTCTG | + |
|
Preference number: 5 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVPWKRS*HGRSCL Trigger: CAGACAGCTCCTCCCGTGCAAACTCCTCTTCCAGGG...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTATGCTGCTTGAAATATaGGCTGCTGCTGCTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: ARTACESHVSFVDSNEMGMLLEI*AAAAAA Trigger: TGCAGCAGCAGCAGCAGCCAATATTTCAAGCAGCAT...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | ATAAGCTTTGGTGACAGTTGTCGGTTTTGTATAAGGACTGCATCATCCCTCCCCCAATCTGACCGCCAGTaGGTACAGTGGACACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ISFGDSCRFCIRTASSLPQSDRQ*VQWTLL Trigger: CAGCAGTGTCCACTGTACCAACTGGCGGTCAGATTG...GGGGAGGGATGATGCAGTCCTTATACAAAACCGACAACTGTCACCAAAGCTTAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | TCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGGCTTCGTGGTGGAACTAAGTTaGTTGGGACAGAAGGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: SHVSFVDSNEMGDCGGGFVVELS*LGQKAF Trigger: GAATGCCTTCTGTCCCAACAAACTTAGTTCCACCAC...GAAGCCGCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | ATAAGCTTTGGTGACAGTTGTCGGTTTTGTATAAGGACTGCATCATCCCTCCCCCCTGGCATCTTCCATTaGGCTTCCAATGGCCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: ISFGDSCRFCIRTASSLPPGIFH*ASNGLS Trigger: GCTCAGGCCATTGGAAGCCAAATGGAAGATGCCAGG...GGGGAGGGATGATGCAGTCCTTATACAAAACCGACAACTGTCACCAAAGCTTAT 50% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS TCA 90 bp | TTTGTTGGGACAGAAGGCATTCCAGAAGGAGCGGCTGAACTAACCTaGTTTGTAACAGAAATAGTGCTAGCAGAGGGCAGAGGACTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: FVGTEGIPEGAAELT*FVTEIVLAEGRGLP Trigger: AGGCAGTCCTCTGCCCTCTGCTAGCACTATTTCTGTTACAAATCAGGTTAGTTCAGCCGCTCCTTCTGGAATGCCTTCTGTCCCAACAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | TTTGAAGGGAAGGAGAAGAGAGCGCAGAATCCAGGAGCAGCCCACTTTCCGAACCACCAGATCCATAGCTaGCTCTATTTTGTTGTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: FEGKEKRAQNPGAAHFPNHQIHS*LYFVVD Trigger: ATCGACAACAAAATAGAGCAAGCTATGGATCTGGTG...GTTCGGAAAGTGGGCTGCTCCTGGATTCTGCGCTCTCTTCTCCTTCCCTTCAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACGATCACAACGTTCTGTaGTGGAAGGTGAGGCAAATG | + |
|
Preference number: 5 (lower is better) Translates to: NTGEKARTACESHVSFVDDHNVL*WKVRQM Trigger: CATTTGCCTCACCTTCCACAACAGAACGTTGTGATC...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | ATAAGCTTTGGTGACAGTTGTCGGTTTTGTATAAGGACTGCATCATCCCTCCCCTCTGCGCAGGAACCATaGGTTGCTGCTGCCCATATT | + |
|
Preference number: 5 (lower is better) Translates to: ISFGDSCRFCIRTASSLPSAQEP*VAAAHI Trigger: AATATGGGCAGCAGCAACCAATGGTTCCTGCGCAGA...GGGGAGGGATGATGCAGTCCTTATACAAAACCGACAACTGTCACCAAAGCTTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | GCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAAGAGGACAATGCTGCTaGAAATATTGGCTGCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ACESHVSFVDSNEMGDCGRGQCC*KYWLLL Trigger: CAGCAGCAGCCAATATTTCAAGCAGCATTGTCCTCT...TCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | GCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGGGGTATGTTTGCCTGTaGACCGATACTTGCAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: AYECLILGRKREQRVSLTGYVCL*TDTCNL Trigger: CAGATTGCAAGTATCGGTCAACAGGCAAACATACCC...CGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AGAACGACTATACAGGTGAGGTGCAGAAACCCCTACTGGGAAATCCACTTCCTTCTGCAGTGGGTATGTTaGCCTGTTGACCGATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: RTTIQVRCRNPYWEIHFLLQWVC*PVDRYL Trigger: CAAGTATCGGTCAACAGGCAAACATACCCACTGCAG...AAGGAAGTGGATTTCCCAGTAGGGGTTTCTGCACCTCACCTGTATAGTCGTTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | TCTAGGAAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCCATCCACCAGGGGTGTaGTCAGCGGTAGCACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: SRKDKPHLFRQPMKHLHFHPPGV*SAVAPS Trigger: TGAAGGTGCTACCGCTGACAACACCCCTGGTGGATG...GAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTTCCTAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGTCCTCCGCGATGCTGTaGTTGGAGCTGATGCTGGCA | + |
|
Preference number: 5 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVSSAML*LELMLA Trigger: TGCCAGCATCAGCTCCAACAACAGCATCGCGGAGGA...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | GTGTCTTCTGATGGTTCAGAAAAGAGGGACAGTACTATCGTGTTTTATAAGCTTGGCACTCATGGTGGCTaGCAGAGGGACAGGCTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: VSSDGSEKRDSTIVFYKLGTHGG*QRDRLK Trigger: CTTCAGCCTGTCCCTCTGCAAGCCACCATGAGTGCC...AAGCTTATAAAACACGATAGTACTGTCCCTCTTTTCTGAACCATCAGAAGACAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | TGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGCACATACTCTGAAGTaGGATTTTGAGTCACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: CESHVSFVDSNEMGDCGGAHTLK*DFESLA Trigger: AGCCAGTGACTCAAAATCCAACTTCAGAGTATGTGC...GCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | CCTAGGTCCCAGCTACCTGTCACCGTTGTGTCACTAACAGTTTTGTGTCTTCTGGCACATACTCTGAAGTaGGATTTTGAGTCACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: PRSQLPVTVVSLTVLCLLAHTLK*DFESLA Trigger: AGCCAGTGACTCAAAATCCAACTTCAGAGTATGTGC...CAGAAGACACAAAACTGTTAGTGACACAACGGTGACAGGTAGCTGGGACCTAGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGAGTGGACACTGCTGTTaGAGCCTGGCCAATGGGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVSGHCC*SLANGL Trigger: CAGCCCATTGGCCAGGCTCAAACAGCAGTGTCCACT...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AGGGTTGAAAAGGCACAGAGCTCCTCGGGGTCAATTAAACCATTCCTCAGACATGTGGAACTAAGTTTGTaGGGACAGAAGGCATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: RVEKAQSSSGSIKPFLRHVELSL*GQKAFQ Trigger: CTGGAATGCCTTCTGTCCCAACAAACTTAGTTCCAC...ATGTCTGAGGAATGGTTTAATTGACCCCGAGGAGCTCTGTGCCTTTTCAACCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACGTGGTGGAACTAAGTTaGTTGGGACAGAAGGCATTC | + |
|
Preference number: 5 (lower is better) Translates to: RTACESHVSFVDSNEMGDVVELS*LGQKAF Trigger: GAATGCCTTCTGTCCCAACAAACTTAGTTCCACCAC...GTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | CACTCTCTCCAGAAGCTGGGTATTCTGTCTCCAAGGGTTCAGTGGAGAAAGTGGGGCTATCAAGGGAGATaGACTAACACTTTGAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: HSLQKLGILSPRVQWRKWGYQGR*TNTLNQ Trigger: TTGGTTCAAAGTGTTAGTCAATCTCCCTTGATAGCC...CCACTTTCTCCACTGAACCCTTGGAGACAGAATACCCAGCTTCTGGAGAGAGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175984.2 |
||
| CDS-3UTR CAA 90 bp | GATACAGAGAGCTGCTTTGAAAGACAAGACTCTCAAGCTTCCTCTATTTCAGTCCCTGGCATCTTCCATTaGGCTTCCAATGGCCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: DTESCFERQDSQASSISVPGIFH*ASNGLS Trigger: GCTCAGGCCATTGGAAGCCAAATGGAAGATGCCAGG...GACTGAAATAGAGGAAGCTTGAGAGTCTTGTCTTTCAAAGCAGCTCTCTGTATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000175984.2 |
||
| CDS-3UTR CAA 90 bp | GTCACGGGGAGTTTACTTCGCAAGACTTCAGCAGCTAGATTCCGGGATTACACAGCTTGCTCTATTTTGTaGTCGATAGCTACCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: VTGSLLRKTSAARFRDYTACSIL*SIATTL Trigger: AAGTGTGGTAGCTATCGACAACAAAATAGAGCAAGC...TGTGTAATCCCGGAATCTAGCTGCTGAAGTCTTGCGAAGTAAACTCCCCGTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | TGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCGCTTGCTCTATTTTGTaGTCGATAGCTACCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: CESHVSFVDSNEMGDCGGACSIL*SIATTL Trigger: AAGTGTGGTAGCTATCGACAACAAAATAGAGCAAGC...GCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | TGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCCACCAGATCCATAGCTaGCTCTATTTTGTTGTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: CESHVSFVDSNEMGDCGGHQIHS*LYFVVD Trigger: ATCGACAACAAAATAGAGCAAGCTATGGATCTGGTG...GCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGCAATCTGACCGCCAGTaGGTACAGTGGACACTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVQSDRQ*VQWTLL Trigger: CAGCAGTGTCCACTGTACCAACTGGCGGTCAGATTG...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | GCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGGGCTATCAAGGGAGATaGACTAACACTTTGAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: AYECLILGRKREQRVSLTGYQGR*TNTLNQ Trigger: TTGGTTCAAAGTGTTAGTCAATCTCCCTTGATAGCC...CGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AGCTGCTTTGAAAGACAAGACTCTCAAGCTTCCTCTATTTCAGTCTTCAGAATACATCCACCAGGGGTGTaGTCAGCGGTAGCACCTGAT | + |
|
Preference number: 5 (lower is better) Translates to: SCFERQDSQASSISVFRIHPPGV*SAVAPD Trigger: ATCAGGTGCTACCGCTGACAACACCCCTGGTGGATG...TATTCTGAAGACTGAAATAGAGGAAGCTTGAGAGTCTTGTCTTTCAAAGCAGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176886.2 |
||
| CDS-3UTR CAA 90 bp | AGGGTTGAAAAGGCACAGAGCTCCTCGGGGTCAATTAAACCATTCCTCAGACATGCTTGCTCTATTTTGTaGTCGATAGCTACCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: RVEKAQSSSGSIKPFLRHACSIL*SIATTL Trigger: AAGTGTGGTAGCTATCGACAACAAAATAGAGCAAGC...ATGTCTGAGGAATGGTTTAATTGACCCCGAGGAGCTCTGTGCCTTTTCAACCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | TGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCATAGCTTGCTCTATTTaGTTGTCGATAGCTACCACA | + |
|
Preference number: 5 (lower is better) Translates to: CESHVSFVDSNEMGDCGGIACSI*LSIATT Trigger: TGTGGTAGCTATCGACAACAAAATAGAGCAAGCTAT...GCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | GCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAATAGCTTGCTCTATTTaGTTGTCGATAGCTACCACA | + |
|
Preference number: 5 (lower is better) Translates to: ACESHVSFVDSNEMGDCGIACSI*LSIATT Trigger: TGTGGTAGCTATCGACAACAAAATAGAGCAAGCTAT...TCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGTCTGCGCAGGAACCATaGGTTGCTGCTGCCCATATT | + |
|
Preference number: 5 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVSAQEP*VAAAHI Trigger: AATATGGGCAGCAGCAACCAATGGTTCCTGCGCAGA...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | CACTCTCTCCAGAAGCTGGGTATTCTGTCTCCAAGGGTTCAGTGGAGAAAGTGGAGATTGACTAACACTTaGAACCAAACTGCCATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: HSLQKLGILSPRVQWRKWRLTNT*NQTAIL Trigger: CAAAATGGCAGTTTGGTTCAAAGTGTTAGTCAATCT...CCACTTTCTCCACTGAACCCTTGGAGACAGAATACCCAGCTTCTGGAGAGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000175984.2 |
||
| CDS-3UTR CAA 90 bp | TTGAAAGAAATTTGTTTATTATCCTTTCCCACTCTCTCCAGAAGCTGGGTATTCCATCCACCAGGGGTGTaGTCAGCGGTAGCACCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: LKEICLLSFPTLSRSWVFHPPGV*SAVAPS Trigger: TGAAGGTGCTACCGCTGACAACACCCCTGGTGGATG...GAATACCCAGCTTCTGGAGAGAGTGGGAAAGGATAATAAACAAATTTCTTTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000175984.2 ENSMUST00000177471.2 |
||
| CDS GCA 90 bp | CTAGCAGCATTAGGGATATTGCTTGTATTTATATTAGCATTACCATaGACGCTGTTCGTCACACTGGGACTGAAACTACCCACAGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: LAALGILLVFILALP*TLFVTLGLKLPTAA Trigger: TGCTGCTGTGGGTAGTTTCAGTCCCAGTGTGACGAACAGCGTGCATGGTAATGCTAATATAAATACAAGCAATATCCCTAATGCTGCTAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048371.15 |
||
| CDS-3UTR CAA 90 bp | AAGCCAAAAGCTTATGAGTGCTTAATACTGGGGAGAAAGCGAGAACAGCGTGTGGCTTGCTCTATTTTGTaGTCGATAGCTACCACACTT | + |
|
Preference number: 5 (lower is better) Translates to: KPKAYECLILGRKREQRVACSIL*SIATTL Trigger: AAGTGTGGTAGCTATCGACAACAAAATAGAGCAAGC...CACACGCTGTTCTCGCTTTCTCCCCAGTATTAAGCACTCATAAGCTTTTGGCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACATAGCTTGCTCTATTTaGTTGTCGATAGCTACCACA | + |
|
Preference number: 5 (lower is better) Translates to: RTACESHVSFVDSNEMGDIACSI*LSIATT Trigger: TGTGGTAGCTATCGACAACAAAATAGAGCAAGCTAT...GTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | GCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGATTCTCTATTAGTTCTTaGATCTGCTCCTTCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: ACESHVSFVDSNEMGDCGFSISS*ICSFRT Trigger: AGTTCTGAAGGAGCAGATCAAAGAACTAATAGAGAA...TCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CAA 90 bp | GCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTTTCTCTATTAGTTCTTaGATCTGCTCCTTCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: ARTACESHVSFVDSNEMGFSISS*ICSFRT Trigger: AGTTCTGAAGGAGCAGATCAAAGAACTAATAGAGAA...ACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CAA 90 bp | TGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAAATGGGTGACTGTGGAGGCTTCTCTATTAGTTCTTaGATCTGCTCCTTCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: CESHVSFVDSNEMGDCGGFSISS*ICSFRT Trigger: AGTTCTGAAGGAGCAGATCAAAGAACTAATAGAGAA...GCCTCCACAGTCACCCATTTCATTGCTGTCTACGAAAGAGACGTGAGACTCACA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CAA 90 bp | CCGGGATTACACAGAGTGACTAACTGGGCCAAATTCTTAAAATTTCTTCAGGTGGAAGAAACGGTACCATaGCCCATGCCACTCAAGATA | + |
|
Preference number: 5 (lower is better) Translates to: PGLHRVTNWAKFLKFLQVEETVP*PMPLKI Trigger: TATCTTGAGTGGCATGGGCAATGGTACCGTTTCTTC...CACCTGAAGAAATTTTAAGAATTTGGCCCAGTTAGTCACTCTGTGTAATCCCGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000048371.15 |
||
| CDS-3UTR CAA 90 bp | AATACTGGGGAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGATTGACTAACACTTaGAACCAAACTGCCATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: NTGEKARTACESHVSFVDRLTNT*NQTAIL Trigger: CAAAATGGCAGTTTGGTTCAAAGTGTTAGTCAATCT...GTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTCCCCAGTATT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AGAACGACTATACAGGTGAGGTGCAGAAACCCCTACTGGGAAATCCACTTCCTTTTCTCTATTAGTTCTTaGATCTGCTCCTTCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: RTTIQVRCRNPYWEIHFLFSISS*ICSFRT Trigger: AGTTCTGAAGGAGCAGATCAAAGAACTAATAGAGAA...AAGGAAGTGGATTTCCCAGTAGGGGTTTCTGCACCTCACCTGTATAGTCGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CAA 90 bp | GAGAAAGCGAGAACAGCGTGTGAGTCTCACGTCTCTTTCGTAGACAGCAATGAATTCTCTATTAGTTCTTaGATCTGCTCCTTCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: EKARTACESHVSFVDSNEFSISS*ICSFRT Trigger: AGTTCTGAAGGAGCAGATCAAAGAACTAATAGAGAA...TTCATTGCTGTCTACGAAAGAGACGTGAGACTCACACGCTGTTCTCGCTTTCTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGCTGCAGTGGGTATGTTaGCCTGTTGACCGATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: TQLVHFFKPKAYECLILGLQWVC*PVDRYL Trigger: CAAGTATCGGTCAACAGGCAAACATACCCACTGCAG...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | GTGTCTTCTGATGGTTCAGAAAAGAGGGACAGTACTATCGTGTTTTATAAGCTTGGGTATGTTTGCCTGTaGACCGATACTTGCAATCTG | + |
|
Preference number: 5 (lower is better) Translates to: VSSDGSEKRDSTIVFYKLGYVCL*TDTCNL Trigger: CAGATTGCAAGTATCGGTCAACAGGCAAACATACCC...AAGCTTATAAAACACGATAGTACTGTCCCTCTTTTCTGAACCATCAGAAGACAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGGTGGAACTAAGTTTGTaGGGACAGAAGGCATTCCAG | + |
|
Preference number: 5 (lower is better) Translates to: TQLVHFFKPKAYECLILGVELSL*GQKAFQ Trigger: CTGGAATGCCTTCTGTCCCAACAAACTTAGTTCCAC...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | TCTAGGAAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCGGCTATCAAGGGAGATaGACTAACACTTTGAACCAA | + |
|
Preference number: 5 (lower is better) Translates to: SRKDKPHLFRQPMKHLHFGYQGR*TNTLNQ Trigger: TTGGTTCAAAGTGTTAGTCAATCTCCCTTGATAGCC...GAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTTCCTAGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGATAGCTTGCTCTATTTaGTTGTCGATAGCTACCACA | + |
|
Preference number: 5 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVIACSI*LSIATT Trigger: TGTGGTAGCTATCGACAACAAAATAGAGCAAGCTAT...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGCACCAGATCCATAGCTaGCTCTATTTTGTTGTCGAT | + |
|
Preference number: 5 (lower is better) Translates to: TQLVHFFKPKAYECLILGHQIHS*LYFVVD Trigger: ATCGACAACAAAATAGAGCAAGCTATGGATCTGGTG...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 |
||
| CDS-3UTR CAA 90 bp | AAGGACAAGCCACACCTTTTCAGACAGCCAATGAAACATCTACATTTCAATGTGTTCTCTATTAGTTCTTaGATCTGCTCCTTCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: KDKPHLFRQPMKHLHFNVFSISS*ICSFRT Trigger: AGTTCTGAAGGAGCAGATCAAAGAACTAATAGAGAA...CACATTGAAATGTAGATGTTTCATTGGCTGTCTGAAAAGGTGTGGCTTGTCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CAA 90 bp | ACTCAACTAGTACATTTCTTCAAGCCAAAAGCTTATGAGTGCTTAATACTGGGGTTCTCTATTAGTTCTTaGATCTGCTCCTTCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: TQLVHFFKPKAYECLILGFSISS*ICSFRT Trigger: AGTTCTGAAGGAGCAGATCAAAGAACTAATAGAGAA...CCCCAGTATTAAGCACTCATAAGCTTTTGGCTTGAAGAAATGTACTAGTTGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 8 transcripts: ENSMUST00000022587.10 ENSMUST00000048371.15 ENSMUST00000101618.9 ENSMUST00000110888.8 ENSMUST00000133224.2 ENSMUST00000140251.9 ENSMUST00000142683.8 ENSMUST00000177207.2 |
||
| CDS-3UTR CAA 90 bp | GTGTCTTCTGATGGTTCAGAAAAGAGGGACAGTACTATCGTGTTTTATAAGCTTAGATTGACTAACACTTaGAACCAAACTGCCATTTTG | + |
|
Preference number: 5 (lower is better) Translates to: VSSDGSEKRDSTIVFYKLRLTNT*NQTAIL Trigger: CAAAATGGCAGTTTGGTTCAAAGTGTTAGTCAATCT...AAGCTTATAAAACACGATAGTACTGTCCCTCTTTTCTGAACCATCAGAAGACAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS GCA 72 bp | CATTGCCGGGTGCGCCATCTTCCTAGCACTAATGTCTaGAGCAGCGGCCGCCGCGGCGGTGGACTCCGGCGG | + |
|
Preference number: 6 (lower is better) Translates to: HCRVRHLPSTNV*SSGRRGGGLRR Trigger: CCGCCGGAGTCCACCGCCGCGGCGGCCGCTGCTGCAGACATTAGTGCTAGGAAGATGGCGCACCCGGCAATG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS CCA 72 bp | TGCGAGAGGAGGTTCAGGCTTTGTGGAGGCGGAGGCTaGGGTCCCTGCGTGGAAGATGCAGCAGGAGGCGGC | + |
|
Preference number: 6 (lower is better) Translates to: CERRFRLCGGGG*GPCVEDAAGGG Trigger: GCCGCCTCCTGCTGCATCTTCCACGCAGGGACCCCAGCCTCCGCCTCCACAAAGCCTGAACCTCCTCTCGCA 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS CAA 72 bp | GCCAATGGGCTGCCCAGCCGCCCCTGCAGGTTGTGTTaGTACTGCTGTGGGCTGCCCTGGCAGCTGGATCCC | + |
|
Preference number: 6 (lower is better) Translates to: ANGLPSRPCRLC*YCCGLPWQLDP Trigger: GGGATCCAGCTGCCAGGGCAGCCCACAGCAGTACAAACACAACCTGCAGGGGCGGCTGGGCAGCCCATTGGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS CAA 72 bp | AGCCTGGCCAATGGGCTGCCCAGCCGCCCCTGCAGGTaGTGTTTGTACTGCTGTGGGCTGCCCTGGCAGCTG | + |
|
Preference number: 6 (lower is better) Translates to: SLANGLPSRPCR*CLYCCGLPWQL Trigger: CAGCTGCCAGGGCAGCCCACAGCAGTACAAACACAACCTGCAGGGGCGGCTGGGCAGCCCATTGGCCAGGCT 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS CAA 90 bp | TTGAGCCTGGCCAATGGGCTGCCCAGCCGCCCCTGCAGGTTGTGTTaGTACTGCTGTGGGCTGCCCTGGCAGCTGGATCCCCTGTGCCTG | + |
|
Preference number: 6 (lower is better) Translates to: LSLANGLPSRPCRLC*YCCGLPWQLDPLCL Trigger: CAGGCACAGGGGATCCAGCTGCCAGGGCAGCCCACAGCAGTACAAACACAACCTGCAGGGGCGGCTGGGCAGCCCATTGGCCAGGCTCAA 66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS CAA 90 bp | TGCTGTTTGAGCCTGGCCAATGGGCTGCCCAGCCGCCCCTGCAGGTaGTGTTTGTACTGCTGTGGGCTGCCCTGGCAGCTGGATCCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: CCLSLANGLPSRPCR*CLYCCGLPWQLDPL Trigger: CAGGGGATCCAGCTGCCAGGGCAGCCCACAGCAGTACAAACACAACCTGCAGGGGCGGCTGGGCAGCCCATTGGCCAGGCTCAAACAGCA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS GCA 72 bp | GGCGCTGCCACCACCGCTGCCCCTTCGAGGGAACATTaGCGGGTGCGCCATCTTCCTAGCACTAATGTCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GAATTAAPSREH*RVRHLPSTNVC Trigger: GCAGACATTAGTGCTAGGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGGGGCAGCGGTGGTGGCAGCGCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS GCA 72 bp | AGAAGATGGAGCAGCACCACTGACGCCCGTACCTGCTaGATTGAGAGCAGAGGCGCTGCCACCACCGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: RRWSSTTDARTC*IESRGAATTAA Trigger: GGCAGCGGTGGTGGCAGCGCCTCTGCTCTCAATGCAGCAGGTACGGGCGTCAGTGGTGCTGCTCCATCTTCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS GCA 72 bp | TGTTTGAGCCTGGCCAATGGGCTGCCCAGCCGCCCCTaGAGGTTGTGTTTGTACTGCTGTGGGCTGCCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: CLSLANGLPSRP*RLCLYCCGLPW Trigger: CCAGGGCAGCCCACAGCAGTACAAACACAACCTGCAGGGGCGGCTGGGCAGCCCATTGGCCAGGCTCAAACA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS CCA 72 bp | GCCGCCGTGATGCCGACCACGCTGACAGGGGAAGGCTaGATACCAGTTGCGGCACTCATGGTGGCTTGCAGA | + |
|
Preference number: 6 (lower is better) Translates to: AAVMPTTLTGEG*IPVAALMVACR Trigger: TCTGCAAGCCACCATGAGTGCCGCAACTGGTATCCAGCCTTCCCCTGTCAGCGTGGTCGGCATCACGGCGGC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 90 bp | TCTTCAGAAGATGGAGCAGCACCACTGACGCCCGTACCTGCTGCATaGAGAGCAGAGGCGCTGCCACCACCGCTGCCCCTTCGAGGGAAC | + |
|
Preference number: 6 (lower is better) Translates to: SSEDGAAPLTPVPAA*RAEALPPPLPLRGN Trigger: GTTCCCTCGAAGGGGCAGCGGTGGTGGCAGCGCCTCTGCTCTCAATGCAGCAGGTACGGGCGTCAGTGGTGCTGCTCCATCTTCTGAAGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS TCA 72 bp | GGGCTACTGAACTCTAGCTGTTGGAGAGCCACACCTTaGAGACCTGGAGGCGCTGGTGGTAGCGGCGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GLLNSSCWRATP*RPGGAGGSGGC Trigger: GCAGCCGCCGCTACCACCAGCGCCTCCAGGTCTTCAAGGTGTGGCTCTCCAACAGCTAGAGTTCAGTAGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 72 bp | CCACCACCGCTGCCCCTTCGAGGGAACATTGCCGGGTaGGCCATCTTCCTAGCACTAATGTCTGCAGCAGCG | + |
|
Preference number: 6 (lower is better) Translates to: PPPLPLRGNIAG*AIFLALMSAAA Trigger: CGCTGCTGCAGACATTAGTGCTAGGAAGATGGCGCACCCGGCAATGTTCCCTCGAAGGGGCAGCGGTGGTGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 72 bp | AGTTGTAGAGAGTTTCCTGGACACTGGGCTCGAGGGTaGCCCTCCGGGAATGGATGGACCGGCCACAGCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SCREFPGHWARG*PSGNGWTGHSS Trigger: GCTGCTGTGGCCGGTCCATCCATTCCCGGAGGGCCACCCTCGAGCCCAGTGTCCAGGAAACTCTCTACAACT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 90 bp | CCACACTTGCACCAGAGCTCTCGTCCTCGCCATCCACCAGGGGTGTaGTCAGCGGTAGCACCTTCAACGGGAAGAGAGAAGCAGGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: PHLHQSSRPRHPPGV*SAVAPSTGREKQGL Trigger: CAGCCCCTGCTTCTCTCTTCCCGTTGAAGGTGCTACCGCTGACAACACCCCTGGTGGATGGCGAGGACGAGAGCTCTGGTGCAAGTGTGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 90 bp | CTGGGAGGAGAGAAGCACTCTCGTCCTCGCCATCCACCAGGGGTGTaGTCAGCGGTAGCACCTTCAACGGGAAGAGAGAAGCAGGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: LGGEKHSRPRHPPGV*SAVAPSTGREKQGL Trigger: CAGCCCCTGCTTCTCTCTTCCCGTTGAAGGTGCTACCGCTGACAACACCCCTGGTGGATGGCGAGGACGAGAGTGCTTCTCTCCTCCCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000177471.2 |
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| CDS TCA 72 bp | ACTGCTGACATTCCCCCACTGTCACCACTCATAGTCTaGGGTAAGCCGCCTAAGGAGGGCTCCGCTGGGCGC | + |
|
Preference number: 6 (lower is better) Translates to: TADIPPLSPLIV*GKPPKEGSAGR Trigger: GCGCCCAGCGGAGCCCTCCTTAGGCGGCTTACCTCAGACTATGAGTGGTGACAGTGGGGGAATGTCAGCAGT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 5 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000175984.2 ENSMUST00000176581.2 ENSMUST00000177471.2 |
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| CDS CCA 72 bp | TCCTGGACACTGGGCTCGAGGGTGGCCCTCCGGGAATaGATGGACCGGCCACAGCAGCATGTGATGAATGAT | + |
|
Preference number: 6 (lower is better) Translates to: SWTLGSRVALRE*MDRPQQHVMND Trigger: ATCATTCATCACATGCTGCTGTGGCCGGTCCATCCATTCCCGGAGGGCCACCCTCGAGCCCAGTGTCCAGGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 72 bp | CCCTGCAGGTTGTGTTTGTACTGCTGTGGGCTGCCCTaGCAGCTGGATCCCCTGTGCCTGAGCCACAGGAAT | + |
|
Preference number: 6 (lower is better) Translates to: PCRLCLYCCGLP*QLDPLCLSHRN Trigger: ATTCCTGTGGCTCAGGCACAGGGGATCCAGCTGCCAGGGCAGCCCACAGCAGTACAAACACAACCTGCAGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 72 bp | GAGGTAAGCCGCCTAAGGAGGGCTCCGCTGGGCGCCTaGCATCTTCCATTTGGCTTCCAATGGCCTGAGCTA | + |
|
Preference number: 6 (lower is better) Translates to: EVSRLRRAPLGA*HLPFGFQWPEL Trigger: TAGCTCAGGCCATTGGAAGCCAAATGGAAGATGCCAGGCGCCCAGCGGAGCCCTCCTTAGGCGGCTTACCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000175984.2 ENSMUST00000176581.2 |
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| CDS GCA 72 bp | AGAACTCCCACTAGTGCTCTCCCTCTCCGAGGACGATaGTTCCGTGGGGGTTTGCTTCACCGTCTCCACCAC | + |
|
Preference number: 6 (lower is better) Translates to: RTPTSALPLRGR*FRGGLLHRLHH Trigger: GTGGTGGAGACGGTGAAGCAAACCCCCACGGAAGCATCGTCCTCGGAGAGGGAGAGCACTAGTGGGAGTTCT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 72 bp | CCATGGCCTGGGGCTATCTGCGCAGGAACCATTGGTTaGTGCTGCCCATATTGTAACTGCTGGGGTGGTGCC | + |
|
Preference number: 6 (lower is better) Translates to: PWPGAICAGTIG*CCPYCNCWGGA Trigger: GGCACCACCCCAGCAGTTACAATATGGGCAGCAGCAACCAATGGTTCCTGCGCAGATAGCCCCAGGCCATGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 72 bp | ACTTGCAATCTGACCGCCAGTTGGTACAGTGGACACTaGTGTTTGAGCCTGGCCAATGGGCTGCCCAGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: TCNLTASWYSGH*CLSLANGLPSR Trigger: GCGGCTGGGCAGCCCATTGGCCAGGCTCAAACAGCAGTGTCCACTGTACCAACTGGCGGTCAGATTGCAAGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 72 bp | ACAACCCCTTGGGCCACGGTTTCTACTCCCTGTGGCTaGGGAGGCACAGTTACCAAGGTACTCTGGGGTGCA | + |
|
Preference number: 6 (lower is better) Translates to: TTPWATVSTPCG*GGTVTKVLWGA Trigger: TGCACCCCAGAGTACCTTGGTAACTGTGCCTCCCCAGCCACAGGGAGTAGAAACCGTGGCCCAAGGGGTTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000176886.2 |
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| CDS CAA 72 bp | GCTCTCCCTCTCCGAGGACGATGCTTCCGTGGGGGTTaGCTTCACCGTCTCCACCACTTTATTGACGGCCAC | + |
|
Preference number: 6 (lower is better) Translates to: ALPLRGRCFRGG*LHRLHHFIDGH Trigger: GTGGCCGTCAATAAAGTGGTGGAGACGGTGAAGCAAACCCCCACGGAAGCATCGTCCTCGGAGAGGGAGAGC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 72 bp | GCTGGCCATGGCCTGGGGCTATCTGCGCAGGAACCATaGGTTGCTGCTGCCCATATTGTAACTGCTGGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: AGHGLGLSAQEP*VAAAHIVTAGV Trigger: CACCCCAGCAGTTACAATATGGGCAGCAGCAACCAATGGTTCCTGCGCAGATAGCCCCAGGCCATGGCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 72 bp | CACCAGAGCTCTCGTCCTCGCCATCCACCAGGGGTGTaGTCAGCGGTAGCACCTTCAACGGGAAGAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: HQSSRPRHPPGV*SAVAPSTGREK Trigger: CTTCTCTCTTCCCGTTGAAGGTGCTACCGCTGACAACACCCCTGGTGGATGGCGAGGACGAGAGCTCTGGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 90 bp | CCCACTAGTGCTCTCCCTCTCCGAGGACGATGCTTCCGTGGGGGTTaGCTTCACCGTCTCCACCACTTTATTGACGGCCACGCCTTCTGT | + |
|
Preference number: 6 (lower is better) Translates to: PTSALPLRGRCFRGG*LHRLHHFIDGHAFC Trigger: ACAGAAGGCGTGGCCGTCAATAAAGTGGTGGAGACGGTGAAGCAAACCCCCACGGAAGCATCGTCCTCGGAGAGGGAGAGCACTAGTGGG 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 90 bp | AGGAGTTTGCACGGGAGGAGCTGTCTGAGAATATGGCAGCTGCGGTaGAGCCAGGCTGGAAACAGAAGGCTGCTGACCTACAGCCGCCGT | + |
|
Preference number: 6 (lower is better) Translates to: RSLHGRSCLRIWQLR*SQAGNRRLLTYSRR Trigger: ACGGCGGCTGTAGGTCAGCAGCCTTCTGTTTCCAGCCTGGCTCAACCGCAGCTGCCATATTCTCAGACAGCTCCTCCCGTGCAAACTCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 90 bp | GATCACTCCTTGTACCTCTCTCGTCCTCGCCATCCACCAGGGGTGTaGTCAGCGGTAGCACCTTCAACGGGAAGAGAGAAGCAGGGGCTG | + |
|
Preference number: 6 (lower is better) Translates to: DHSLYLSRPRHPPGV*SAVAPSTGREKQGL Trigger: CAGCCCCTGCTTCTCTCTTCCCGTTGAAGGTGCTACCGCTGACAACACCCCTGGTGGATGGCGAGGACGAGAGAGGTACAAGGAGTGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000176581.2 |
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| CDS CCA 72 bp | CCTCTGAGGAGCTTCGTTCAGGCTCACCTAAGTCAGTaGCCCTGGAAAGGGAGACGTCGAGGATCTCGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: PLRSFVQAHLSQ*PWKGRRRGSRK Trigger: CTTCCGAGATCCTCGACGTCTCCCTTTCCAGGGCCACTGACTTAGGTGAGCCTGAACGAAGCTCCTCAGAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 72 bp | TTGGTACAGTGGACACTGCTGTTTGAGCCTGGCCAATaGGCTGCCCAGCCGCCCCTGCAGGTTGTGTTTGTA | + |
|
Preference number: 6 (lower is better) Translates to: LVQWTLLFEPGQ*AAQPPLQVVFV Trigger: TACAAACACAACCTGCAGGGGCGGCTGGGCAGCCCATTGGCCAGGCTCAAACAGCAGTGTCCACTGTACCAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 72 bp | CACGGGAGGAGCTGTCTGAGAATATGGCAGCTGCGGTaGAGCCAGGCTGGAAACAGAAGGCTGCTGACCTAC | + |
|
Preference number: 6 (lower is better) Translates to: HGRSCLRIWQLR*SQAGNRRLLTY Trigger: GTAGGTCAGCAGCCTTCTGTTTCCAGCCTGGCTCAACCGCAGCTGCCATATTCTCAGACAGCTCCTCCCGTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 72 bp | GAGAAGCACTCTCGTCCTCGCCATCCACCAGGGGTGTaGTCAGCGGTAGCACCTTCAACGGGAAGAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: EKHSRPRHPPGV*SAVAPSTGREK Trigger: CTTCTCTCTTCCCGTTGAAGGTGCTACCGCTGACAACACCCCTGGTGGATGGCGAGGACGAGAGTGCTTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000177471.2 |
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| CDS CAA 90 bp | GCTGACAGGGGAAGGCTGGATACCAGTTGCGGCACTCATGGTGGCTaGCAGAGGGACAGGCTGAAGAGTCTGCTTCTGCTGAAAGCTCAA | + |
|
Preference number: 6 (lower is better) Translates to: ADRGRLDTSCGTHGG*QRDRLKSLLLLKAQ Trigger: TTGAGCTTTCAGCAGAAGCAGACTCTTCAGCCTGTCCCTCTGCAAGCCACCATGAGTGCCGCAACTGGTATCCAGCCTTCCCCTGTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS GCA 72 bp | GCAGGAACCATTGGTTGCTGCTGCCCATATTGTAACTaGTGGGGTGGTGCCCCTGGAAGAGGAGTTTGCACG | + |
|
Preference number: 6 (lower is better) Translates to: AGTIGCCCPYCN*WGGAPGRGVCT Trigger: CGTGCAAACTCCTCTTCCAGGGGCACCACCCCAGCAGTTACAATATGGGCAGCAGCAACCAATGGTTCCTGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 72 bp | CTGGAAGCCACTTTTCTTTTTCATCTGAGTTCCGCCTaGCGCAAGAGGCTGTCCCTGCAGCTGAGCCTGCGA | + |
|
Preference number: 6 (lower is better) Translates to: LEATFLFHLSSA*RKRLSLQLSLR Trigger: TCGCAGGCTCAGCTGCAGGGACAGCCTCTTGCGCCAGGCGGAACTCAGATGAAAAAGAAAAGTGGCTTCCAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 72 bp | ATCAGAACTTCCAGTTGTAGAGAGTTTCCTGGACACTaGGCTCGAGGGTGGCCCTCCGGGAATGGATGGACC | + |
|
Preference number: 6 (lower is better) Translates to: IRTSSCREFPGH*ARGWPSGNGWT Trigger: GGTCCATCCATTCCCGGAGGGCCACCCTCGAGCCCAGTGTCCAGGAAACTCTCTACAACTGGAAGTTCTGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 72 bp | GGAACCATTGGTTGCTGCTGCCCATATTGTAACTGCTaGGGTGGTGCCCCTGGAAGAGGAGTTTGCACGGGA | + |
|
Preference number: 6 (lower is better) Translates to: GTIGCCCPYCNC*GGAPGRGVCTG Trigger: TCCCGTGCAAACTCCTCTTCCAGGGGCACCACCCCAGCAGTTACAATATGGGCAGCAGCAACCAATGGTTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 72 bp | TTGTACCTCTCTCGTCCTCGCCATCCACCAGGGGTGTaGTCAGCGGTAGCACCTTCAACGGGAAGAGAGAAG | + |
|
Preference number: 6 (lower is better) Translates to: LYLSRPRHPPGV*SAVAPSTGREK Trigger: CTTCTCTCTTCCCGTTGAAGGTGCTACCGCTGACAACACCCCTGGTGGATGGCGAGGACGAGAGAGGTACAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000176581.2 |
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| CDS CCA 72 bp | AAGAGGAGTTTGCACGGGAGGAGCTGTCTGAGAATATaGCAGCTGCGGTTGAGCCAGGCTGGAAACAGAAGG | + |
|
Preference number: 6 (lower is better) Translates to: KRSLHGRSCLRI*QLRLSQAGNRR Trigger: CCTTCTGTTTCCAGCCTGGCTCAACCGCAGCTGCCATATTCTCAGACAGCTCCTCCCGTGCAAACTCCTCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 72 bp | GCCCGTGGAACTGGACTGCCCAGAGGACAATGCTGCTaGAAATATTGGCTGCTGCTGCTGCTGCACATACTC | + |
|
Preference number: 6 (lower is better) Translates to: ARGTGLPRGQCC*KYWLLLLLHIL Trigger: GAGTATGTGCAGCAGCAGCAGCAGCCAATATTTCAAGCAGCATTGTCCTCTGGGCAGTCCAGTTCCACGGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 90 bp | TGGGTATGTTTGCCTGTTGACCGATACTTGCAATCTGACCGCCAGTaGGTACAGTGGACACTGCTGTTTGAGCCTGGCCAATGGGCTGCC | + |
|
Preference number: 6 (lower is better) Translates to: WVCLPVDRYLQSDRQ*VQWTLLFEPGQWAA Trigger: GGCAGCCCATTGGCCAGGCTCAAACAGCAGTGTCCACTGTACCAACTGGCGGTCAGATTGCAAGTATCGGTCAACAGGCAAACATACCCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS TCA 72 bp | TTAACTGTTGGTTGCTGCTGCTGCTGCTGCTGCTGCTaGCTGGAAACCACTCCCACAGTGATACCTGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: LTVGCCCCCCCC*LETTPTVIPAA Trigger: AGCTGCAGGTATCACTGTGGGAGTGGTTTCCAGTCAGCAGCAGCAGCAGCAGCAGCAGCAACCAACAGTTAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS TCA 72 bp | CCCGTGGAACTGGACTGCCCAGAGGACAATGCTGCTTaGAATATTGGCTGCTGCTGCTGCTGCACATACTCT | + |
|
Preference number: 6 (lower is better) Translates to: PVELDCPEDNAA*NIGCCCCCTYS Trigger: AGAGTATGTGCAGCAGCAGCAGCAGCCAATATTTCAAGCAGCATTGTCCTCTGGGCAGTCCAGTTCCACGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 90 bp | CTGCTTGAAATATTGGCTGCTGCTGCTGCTGCACATACTCTGAAGTaGGATTTTGAGTCACTGGCTGGCCATGGCCTGGGGCTATCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: LLEILAAAAAAHTLK*DFESLAGHGLGLSA Trigger: CGCAGATAGCCCCAGGCCATGGCCAGCCAGTGACTCAAAATCCAACTTCAGAGTATGTGCAGCAGCAGCAGCAGCCAATATTTCAAGCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS TCA 72 bp | GCGATGCTGTTGTTGGAGCTGATGCTGGCAGAGATCTaGGCCGGAGTAACGCTAGTTATCTGGAAGCCACTT | + |
|
Preference number: 6 (lower is better) Translates to: AMLLLELMLAEI*AGVTLVIWKPL Trigger: AAGTGGCTTCCAGATAACTAGCGTTACTCCGGCTCAGATCTCTGCCAGCATCAGCTCCAACAACAGCATCGC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS TCA 72 bp | GGGGAGGCACAGTTACCAAGGTACTCTGGGGTGCAATaGCCAATTGTTGTGGAAGGCTTGAAGCACGGGTTT | + |
|
Preference number: 6 (lower is better) Translates to: GEAQLPRYSGVQ*PIVVEGLKHGF Trigger: AAACCCGTGCTTCAAGCCTTCCACAACAATTGGTCATTGCACCCCAGAGTACCTTGGTAACTGTGCCTCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000176886.2 |
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| CDS CCA 72 bp | TGGTTAGGAGAGACTGCCCCAGGTGTCTCAGCTTCCTaGAAGTTATTCAGAGTCTCCTCTGAGGAGCTTCGT | + |
|
Preference number: 6 (lower is better) Translates to: WLGETAPGVSAS*KLFRVSSEELR Trigger: ACGAAGCTCCTCAGAGGAGACTCTGAATAACTTCCAGGAAGCTGAGACACCTGGGGCAGTCTCTCCTAACCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 72 bp | GAATCACTGATATTCCTGCCCCCGTGCCCGTGGAACTaGACTGCCCAGAGGACAATGCTGCTTGAAATATTG | + |
|
Preference number: 6 (lower is better) Translates to: ESLIFLPPCPWN*TAQRTMLLEIL Trigger: CAATATTTCAAGCAGCATTGTCCTCTGGGCAGTCCAGTTCCACGGGCACGGGGGCAGGAATATCAGTGATTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CCA 72 bp | TGCCTGTTGACCGATACTTGCAATCTGACCGCCAGTTaGTACAGTGGACACTGCTGTTTGAGCCTGGCCAAT | + |
|
Preference number: 6 (lower is better) Translates to: CLLTDTCNLTAS*YSGHCCLSLAN Trigger: ATTGGCCAGGCTCAAACAGCAGTGTCCACTGTACCAACTGGCGGTCAGATTGCAAGTATCGGTCAACAGGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 72 bp | CTTCACAACCCTGAACCTCGATGTGTTAACTGTTGGTaGCTGCTGCTGCTGCTGCTGCTGCTGACTGGAAAC | + |
|
Preference number: 6 (lower is better) Translates to: LHNPEPRCVNCW*LLLLLLLLTGN Trigger: GTTTCCAGTCAGCAGCAGCAGCAGCAGCAGCAGCAACCAACAGTTAACACATCGAGGTTCAGGGTTGTGAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS CAA 72 bp | TTGCCTGTTGACCGATACTTGCAATCTGACCGCCAGTaGGTACAGTGGACACTGCTGTTTGAGCCTGGCCAA | + |
|
Preference number: 6 (lower is better) Translates to: LPVDRYLQSDRQ*VQWTLLFEPGQ Trigger: TTGGCCAGGCTCAAACAGCAGTGTCCACTGTACCAACTGGCGGTCAGATTGCAAGTATCGGTCAACAGGCAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS CAA 72 bp | AGAGGGCTGCTGTACTGCAGTGGGTATGTTTGCCTGTaGACCGATACTTGCAATCTGACCGCCAGTTGGTAC | + |
|
Preference number: 6 (lower is better) Translates to: RGLLYCSGYVCL*TDTCNLTASWY Trigger: GTACCAACTGGCGGTCAGATTGCAAGTATCGGTCAACAGGCAAACATACCCACTGCAGTACAGCAGCCCTCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS CAA 90 bp | AGGGCTGCTGTACTGCAGTGGGTATGTTTGCCTGTTGACCGATACTaGCAATCTGACCGCCAGTTGGTACAGTGGACACTGCTGTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: RAAVLQWVCLPVDRY*QSDRQLVQWTLLFE Trigger: CTCAAACAGCAGTGTCCACTGTACCAACTGGCGGTCAGATTGCAAGTATCGGTCAACAGGCAAACATACCCACTGCAGTACAGCAGCCCT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS CAA 90 bp | AACTTGGGTAGAGGGCTGCTGTACTGCAGTGGGTATGTTTGCCTGTaGACCGATACTTGCAATCTGACCGCCAGTTGGTACAGTGGACAC | + |
|
Preference number: 6 (lower is better) Translates to: NLGRGLLYCSGYVCL*TDTCNLTASWYSGH Trigger: GTGTCCACTGTACCAACTGGCGGTCAGATTGCAAGTATCGGTCAACAGGCAAACATACCCACTGCAGTACAGCAGCCCTCTACCCAAGTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
||
| CDS CAA 90 bp | TGCCCGTGGAACTGGACTGCCCAGAGGACAATGCTGCTTGAAATATaGGCTGCTGCTGCTGCTGCACATACTCTGAAGTTGGATTTTGAG | + |
|
Preference number: 6 (lower is better) Translates to: CPWNWTAQRTMLLEI*AAAAAAHTLKLDFE Trigger: CTCAAAATCCAACTTCAGAGTATGTGCAGCAGCAGCAGCAGCCAATATTTCAAGCAGCATTGTCCTCTGGGCAGTCCAGTTCCACGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS TCA 72 bp | GGTGATGATGGAGGTGGTGGGGATGGGCATTCCCATTaGTCACAACGTTCTGTTGTGGAAGGTGAGGCAAAT | + |
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Preference number: 6 (lower is better) Translates to: GDDGGGGDGHSH*SQRSVVEGEAN Trigger: ATTTGCCTCACCTTCCACAACAGAACGTTGTGATCAATGGGAATGCCCATCCCCACCACCTCCATCATCACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS TCA 72 bp | TTGAAATATTGGCTGCTGCTGCTGCTGCACATACTCTaGAGTTGGATTTTGAGTCACTGGCTGGCCATGGCC | + |
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Preference number: 6 (lower is better) Translates to: LKYWLLLLLHIL*SWILSHWLAMA Trigger: GGCCATGGCCAGCCAGTGACTCAAAATCCAACTTCAGAGTATGTGCAGCAGCAGCAGCAGCCAATATTTCAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS TCA 72 bp | GGTAGGACTACTTGTGAAGATGGAGGAGCACCTTGCTaGATAACTGAAGGTGTAACTTGGGTAGAGGGCTGC | + |
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Preference number: 6 (lower is better) Translates to: GRTTCEDGGAPC*ITEGVTWVEGC Trigger: GCAGCCCTCTACCCAAGTTACACCTTCAGTTATTCAGCAAGGTGCTCCTCCATCTTCACAAGTAGTCCTACC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS TCA 72 bp | ACTCTGGGGTGCAATGACCAATTGTTGTGGAAGGCTTaGAGCACGGGTTTGAACTCCCTGATGAATGATCCC | + |
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Preference number: 6 (lower is better) Translates to: TLGCNDQLLWKA*STGLNSLMNDP Trigger: GGGATCATTCATCAGGGAGTTCAAACCCGTGCTTCAAGCCTTCCACAACAATTGGTCATTGCACCCCAGAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000176886.2 |
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| CDS GCA 72 bp | CTGACTGGAAACCACTCCCACAGTGATACCTGCAGCTaGATTAAGGACACTGTTAGCAACAGGAGAGGAAGA | + |
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Preference number: 6 (lower is better) Translates to: LTGNHSHSDTCS*IKDTVSNRRGR Trigger: TCTTCCTCTCCTGTTGCTAACAGTGTCCTTAATGCAGCTGCAGGTATCACTGTGGGAGTGGTTTCCAGTCAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048371.15 |
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| CDS CCA 72 bp | CTCCACCACTTTATTGACGGCCACGCCTTCTGTAGCTaGCACAGCGTTTTCCTTCTCATAGAATTCTGTGCA | + |
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Preference number: 6 (lower is better) Translates to: LHHFIDGHAFCS*HSVFLLIEFCA Trigger: TGCACAGAATTCTATGAGAAGGAAAACGCTGTGCCAGCTACAGAAGGCGTGGCCGTCAATAAAGTGGTGGAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 72 bp | AACTGGACTGCCCAGAGGACAATGCTGCTTGAAATATaGGCTGCTGCTGCTGCTGCACATACTCTGAAGTTG | + |
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Preference number: 6 (lower is better) Translates to: NWTAQRTMLLEI*AAAAAAHTLKL Trigger: CAACTTCAGAGTATGTGCAGCAGCAGCAGCAGCCAATATTTCAAGCAGCATTGTCCTCTGGGCAGTCCAGTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 72 bp | GGGAGATTGACTAACACTTTGAACCAAACTGCCATTTaGGGTGGCTGGGGGTTGTGCTATATTCTGTGGTGG | + |
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Preference number: 6 (lower is better) Translates to: GRLTNTLNQTAI*GGWGLCYILWW Trigger: CCACCACAGAATATAGCACAACCCCCAGCCACCCAAAATGGCAGTTTGGTTCAAAGTGTTAGTCAATCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000175984.2 ENSMUST00000176581.2 |
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| CDS CAA 72 bp | TGGCTTTTCACCAGATCCATAGCTTGCTCTATTTTGTaGTCGATAGCTACCACACTTGCACCAGAGCTCTCG | + |
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Preference number: 6 (lower is better) Translates to: WLFTRSIACSIL*SIATTLAPELS Trigger: CGAGAGCTCTGGTGCAAGTGTGGTAGCTATCGACAACAAAATAGAGCAAGCTATGGATCTGGTGAAAAGCCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS TCA 72 bp | GTTTGTTGGGACAGAAGGCATTCCAGAAGGAGCGGCTaGACTAACCTGATTTGTAACAGAAATAGTGCTAGC | + |
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Preference number: 6 (lower is better) Translates to: VCWDRRHSRRSG*TNLICNRNSAS Trigger: GCTAGCACTATTTCTGTTACAAATCAGGTTAGTTCAGCCGCTCCTTCTGGAATGCCTTCTGTCCCAACAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 72 bp | TATGTTAGTGGCTATCAAGGGAGATTGACTAACACTTaGAACCAAACTGCCATTTTGGGTGGCTGGGGGTTG | + |
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Preference number: 6 (lower is better) Translates to: YVSGYQGRLTNT*NQTAILGGWGL Trigger: CAACCCCCAGCCACCCAAAATGGCAGTTTGGTTCAAAGTGTTAGTCAATCTCCCTTGATAGCCACTAACATA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000175984.2 ENSMUST00000176581.2 |
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| CDS CAA 90 bp | CTGGTAACTCCAGGCCCACCACTTATGCTAGCAGCATTAGGGATATaGCTTGTATTTATATTAGCATTACCATGCACGCTGTTCGTCACA | + |
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Preference number: 6 (lower is better) Translates to: LVTPGPPLMLAALGI*LVFILALPCTLFVT Trigger: TGTGACGAACAGCGTGCATGGTAATGCTAATATAAATACAAGCAATATCCCTAATGCTGCTAGCATAAGTGGTGGGCCTGGAGTTACCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048371.15 |
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| CDS CAA 72 bp | TGGCTTTTCACCAGATCCATAGCTTGCTCTATTTTGTaGTCGATAGCTACCACACTTGCACCAGAGCTATTG | + |
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Preference number: 6 (lower is better) Translates to: WLFTRSIACSIL*SIATTLAPELL Trigger: CAATAGCTCTGGTGCAAGTGTGGTAGCTATCGACAACAAAATAGAGCAAGCTATGGATCTGGTGAAAAGCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000022587.10 |
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| CDS CAA 72 bp | AAATGGCTTTTCACCAGATCCATAGCTTGCTCTATTTaGTTGTCGATAGCTACCACACTTGCACCAGAGCTC | + |
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Preference number: 6 (lower is better) Translates to: KWLFTRSIACSI*LSIATTLAPEL Trigger: GAGCTCTGGTGCAAGTGTGGTAGCTATCGACAACAAAATAGAGCAAGCTATGGATCTGGTGAAAAGCCATTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 |
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| CDS CAA 72 bp | AAATGGCTTTTCACCAGATCCATAGCTTGCTCTATTTaGTTGTCGATAGCTACCACACTTGCACCAGAGCTA | + |
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Preference number: 6 (lower is better) Translates to: KWLFTRSIACSI*LSIATTLAPEL Trigger: TAGCTCTGGTGCAAGTGTGGTAGCTATCGACAACAAAATAGAGCAAGCTATGGATCTGGTGAAAAGCCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000022587.10 |
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| CDS CAA 72 bp | TGGCTTTTCACCAGATCCATAGCTTGCTCTATTTTGTaGTCGATAGCTACCACACTTGCACCAGAGCTTAAA | + |
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Preference number: 6 (lower is better) Translates to: WLFTRSIACSIL*SIATTLAPELK Trigger: TTTAAGCTCTGGTGCAAGTGTGGTAGCTATCGACAACAAAATAGAGCAAGCTATGGATCTGGTGAAAAGCCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000101618.9 |
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| CDS CAA 72 bp | AAATGGCTTTTCACCAGATCCATAGCTTGCTCTATTTaGTTGTCGATAGCTACCACACTTGCACCAGAGCTT | + |
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Preference number: 6 (lower is better) Translates to: KWLFTRSIACSI*LSIATTLAPEL Trigger: AAGCTCTGGTGCAAGTGTGGTAGCTATCGACAACAAAATAGAGCAAGCTATGGATCTGGTGAAAAGCCATTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000101618.9 |
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| CDS CAA 90 bp | AGGCAAATTTATGTTAGTGGCTATCAAGGGAGATTGACTAACACTTaGAACCAAACTGCCATTTTGGGTGGCTGGGGGTTGTGCTATATT | + |
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Preference number: 6 (lower is better) Translates to: RQIYVSGYQGRLTNT*NQTAILGGWGLCYI Trigger: AATATAGCACAACCCCCAGCCACCCAAAATGGCAGTTTGGTTCAAAGTGTTAGTCAATCTCCCTTGATAGCCACTAACATAAATTTGCCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000048371.15 ENSMUST00000110888.8 ENSMUST00000175984.2 ENSMUST00000176581.2 |
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| CDS GCA 72 bp | TTAGGGATATTGCTTGTATTTATATTAGCATTACCATaGACGCTGTTCGTCACACTGGGACTGAAACTACCC | + |
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Preference number: 6 (lower is better) Translates to: LGILLVFILALP*TLFVTLGLKLP Trigger: GGGTAGTTTCAGTCCCAGTGTGACGAACAGCGTGCATGGTAATGCTAATATAAATACAAGCAATATCCCTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000048371.15 |
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| CDS CAA 90 bp | ACAAGTAATTTTAAATCAGTACATACCATAGCTTGCTCTATTTTGTaGTCGATAGCTACCACACTTGCACCAGAGCTATTGTCAAGTCTC | + |
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Preference number: 6 (lower is better) Translates to: TSNFKSVHTIACSIL*SIATTLAPELLSSL Trigger: GAGACTTGACAATAGCTCTGGTGCAAGTGTGGTAGCTATCGACAACAAAATAGAGCAAGCTATGGTATGTACTGATTTAAAATTACTTGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000134109.2 |
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