RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TSC2 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000002496

Ensembl transcript IDs: ENSMUST00000097373.2, ENSMUST00000226284.2, ENSMUST00000226398.2, ENSMUST00000227607.2, ENSMUST00000227658.2, ENSMUST00000227745.2, ENSMUST00000227804.2, ENSMUST00000228412.2

Found 922 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp ATTACTGGATCCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTaGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGGCCAGGC +
Preference number: 1 (lower is better)
Translates to: ITGSESGLGQVLDSN*GHRGLVFLPCLGPG
Trigger: GCCTGGCCCCAGACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGATCCAGTAAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR GCA 90 bp GGGAAGCTGCAGCTATTACTGGATCCGAGTCTGGCCTCGGGCAGGTaGTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTT +
Preference number: 1 (lower is better)
Translates to: GKLQLLLDPSLASGR*WTAIGATVALFSSL
Trigger: AAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGATCCAGTAATAGCTGCAGCTTCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR CCA 90 bp CATTGTTACCCAGGGCAGGGGTACAGGGGAAGCTGCAGCTATTACTaGATCCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGG +
Preference number: 1 (lower is better)
Translates to: HCYPGQGYRGSCSYY*IRVWPRAGAGQQLG
Trigger: CCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGATCCAGTAATAGCTGCAGCTTCCCCTGTACCCCTGCCCTGGGTAACAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR GCA 90 bp CCCATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTaGTTCTGTGGGCTCATCTGCAGCTCTAGCCTGGATTCTGCCCCA +
Preference number: 1 (lower is better)
Translates to: PMAGGGKRMYVMAPA*FCGLICSSSLDSAP
Trigger: TGGGGCAGAATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCATGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR CCA 90 bp AAGCTGCAGCTATTACTGGATCCGAGTCTGGCCTCGGGCAGGTGCTaGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTC +
Preference number: 1 (lower is better)
Translates to: KLQLLLDPSLASGRC*TAIGATVALFSSLV
Trigger: GACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGATCCAGTAATAGCTGCAGCTT
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR CCA 90 bp TGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTCTaGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAA +
Preference number: 1 (lower is better)
Translates to: WTAIGATVALFSSLV*GQAARRSAGFRSEQ
Trigger: TTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCCAGACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR GCA 90 bp AAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGCTCATCTaGAGCTCTAGCCTGGATTCTGCCCCAACCCCAAACAGACAAGAC +
Preference number: 1 (lower is better)
Translates to: KRMYVMAPACFCGLI*SSSLDSAPTPNRQD
Trigger: GTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR GCA 90 bp AACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGTCTGACTaGTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTG +
Preference number: 1 (lower is better)
Translates to: NPKQTRQSQIKKLSD*CLCCSLNSTGQMCV
Trigger: CACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR GCA 90 bp CAGACAAGACAAAGTCAAATAAAGAAGCTGTCTGACTGCTGTCTGTaGTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTA +
Preference number: 1 (lower is better)
Translates to: QTRQSQIKKLSDCCL*CSLNSTGQMCVCSL
Trigger: TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTGACTTTGTCTTGTCTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR GCA 90 bp ATCCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTGTGATGGCACCTGCCTaGTTCTGTGGGCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: IRVWPRAGAGQQLGPPWPVMAPA*FCGLIC
Trigger: GCAGATGAGCCCACAGAAGCAGGCAGGTGCCATCAC...AGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR CCA 90 bp CCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTGCCCCCATGGCGGGTaGGGGAAAGAGAATGTATGT +
Preference number: 2 (lower is better)
Translates to: PSLASGRCWTAIGATVALCPHGG*GKENVC
Trigger: ACATACATTCTCTTTCCCCCACCCGCCATGGGGGCA...CAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR TCA 90 bp ATCCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGCTGGTTTCAGATCTaGGCAAGGGCAGGACTACTG +
Preference number: 2 (lower is better)
Translates to: IRVWPRAGAGQQLGPPWPCWFQI*ARAGLL
Trigger: CAGTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCA...AGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR GCA 90 bp AAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGGGGTGATGGCACCTGCCTaGTTCTGTGGGCTCATCTGC +
Preference number: 2 (lower is better)
Translates to: KKLLDKPTNGACPHGGWGVMAPA*FCGLIC
Trigger: GCAGATGAGCCCACAGAAGCAGGCAGGTGCCATCAC...CCCCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR GCA 90 bp CCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTCCACGGGCCAGATGTaGGTGTGCAGTTTATTTCAT +
Preference number: 2 (lower is better)
Translates to: PSLASGRCWTAIGATVALSTGQM*VCSLFH
Trigger: ATGAAATAAACTGCACACGCACATCTGGCCCGTGGA...CAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR TCA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGGTCTGTGCTGCTCTCTaGACTCCACGGGCCAGATGT +
Preference number: 2 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWVCAAL*TPRARC
Trigger: ACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGAC...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR TCA 90 bp CGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGGAAAGAGAATGTATGTaGTGGCACCTGCCTGCTTCT +
Preference number: 2 (lower is better)
Translates to: RAGAGQQLGPPWPCFPPLERECM*WHLPAS
Trigger: AGAAGCAGGCAGGTGCCATCACATACATTCTCTTTC...CAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR GCA 90 bp ATCCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTCTGTGGGATGAAAGATaGCAAGAAGTTACTGGACAA +
Preference number: 2 (lower is better)
Translates to: IRVWPRAGAGQQLGPPWPLWDER*QEVTGQ
Trigger: TTGTCCAGTAACTTCTTGGCATCTTTCATCCCACAG...AGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR GCA 90 bp CCTGCTTCTGTGGGCTCATCTGCAGCTCTAGCCTGGATTCTGCCCCAACCCCAATCCACGGGCCAGATGTaGGTGTGCAGTTTATTTCAT +
Preference number: 2 (lower is better)
Translates to: PASVGSSAALAWILPQPQSTGQM*VCSLFH
Trigger: ATGAAATAAACTGCACACGCACATCTGGCCCGTGGA...TTGGGGTTGGGGCAGAATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR GCA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGGTATGTGATGGCACCTaGCTGCTTCTGTGGGCTCAT +
Preference number: 2 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWVCDGT*LLLWAH
Trigger: ATGAGCCCACAGAAGCAGGCAGGTGCCATCACATAC...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR GCA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCACTGGCCTCGGGCAGGTaGTGGACAGCAATTGGGGCC +
Preference number: 2 (lower is better)
Translates to: FLQHTCPLATICFLCPPSLASGR*WTAIGA
Trigger: GGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAG...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR CCA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAGCCTCGGGCAGGTGCTaGACAGCAATTGGGGCCACC +
Preference number: 2 (lower is better)
Translates to: FLQHTCPLATICFLCPPSASGRC*TAIGAT
Trigger: GGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGC...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR TCA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGAATAAAGAAGCTGTCTaGCTGCTGTCTGTGCTGCTC +
Preference number: 2 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGNKEAV*LLSVLL
Trigger: GAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATT...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR GCA 90 bp CCTGCTTCTGTGGGCTCATCTGCAGCTCTAGCCTGGATTCTGCCCCAACCCCAAGGCCAGATGTGCGTGTaGAGTTTATTTCATGTAGGA +
Preference number: 2 (lower is better)
Translates to: PASVGSSAALAWILPQPQGQMCV*SLFHVG
Trigger: TCCTACATGAAATAAACTGCACACGCACATCTGGCC...TTGGGGTTGGGGCAGAATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR TCA 90 bp CCTGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGGTCTGTGCTGCTCTCTaGACTCCACGGGCCAGATGT +
Preference number: 2 (lower is better)
Translates to: PGFCPNPKQTRQSQIKKLVCAAL*TPRARC
Trigger: ACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGAC...CAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR GCA 90 bp TCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTACTGTGGGATGAAAGATGCCAAGAAGCTGTCTGACTaGTGTCTGTGCTGCTCTCTG +
Preference number: 2 (lower is better)
Translates to: SAGFRSEQGQDYCGMKDAKKLSD*CLCCSL
Trigger: CAGAGAGCAGCACAGACAGCAGTCAGACAGCTTCTT...GGCATCTTTCATCCCACAGTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR CCA 90 bp CTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCTGCCCCCATGGCGGGTaGGGGAAAGAGAATGTATGT +
Preference number: 2 (lower is better)
Translates to: LVSAAYLPSSYHLLSMSTCPHGG*GKENVC
Trigger: ACATACATTCTCTTTCCCCCACCCGCCATGGGGGCA...GGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR CCA 90 bp TTTGTATGTCAGTATTTTCTACTTGGGCTGAAAATGGGTCCATTGTTACCCAGGGGACAAGCCCACCAATaGGGCTTGCCCCCATGGCGG +
Preference number: 2 (lower is better)
Translates to: FVCQYFLLGLKMGPLLPRGQAHQ*GLPPWR
Trigger: CCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCC...CCTGGGTAACAATGGACCCATTTTCAGCCCAAGTAGAAAATACTGACATACAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR CCA 90 bp GTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCCAATTGGGGCCACCGTaGCCTTGTTTTCCTCCCTTG +
Preference number: 2 (lower is better)
Translates to: VSAAYLPSSYHLLSMSTIQLGPP*PCFPPL
Trigger: CAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTG...GATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR GCA 90 bp TCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTACTGTGGGATGAAAGATGCCGGCCAGATGTGCGTGTaGAGTTTATTTCATGTAGGA +
Preference number: 2 (lower is better)
Translates to: SAGFRSEQGQDYCGMKDAGQMCV*SLFHVG
Trigger: TCCTACATGAAATAAACTGCACACGCACATCTGGCC...GGCATCTTTCATCCCACAGTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR GCA 90 bp GCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAATAATGTATGTGATGGCACCTaGCTGCTTCTGTGGGCTCAT +
Preference number: 2 (lower is better)
Translates to: AAYLPSSYHLLSMSTINNVCDGT*LLLWAH
Trigger: ATGAGCCCACAGAAGCAGGCAGGTGCCATCACATAC...ATTATTGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR CCA 72 bp CCAGGGCAGGGGTACAGGGGAAGCTGCAGCTATTACTaGATCCGAGTCTGGCCTCGGGCAGGTGCTGGACAG +
Preference number: 3 (lower is better)
Translates to: PGQGYRGSCSYY*IRVWPRAGAGQ
Trigger: CTGTCCAGCACCTGCCCGAGGCCAGACTCGGATCCAGTAATAGCTGCAGCTTCCCCTGTACCCCTGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR CCA 72 bp TCCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTaGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTCTG +
Preference number: 3 (lower is better)
Translates to: SESGLGQVLDSN*GHRGLVFLPCL
Trigger: CAGACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR GCA 72 bp CAGCTATTACTGGATCCGAGTCTGGCCTCGGGCAGGTaGTGGACAGCAATTGGGGCCACCGTGGCCTTGTTT +
Preference number: 3 (lower is better)
Translates to: QLLLDPSLASGR*WTAIGATVALF
Trigger: AAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGATCCAGTAATAGCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR GCA 72 bp GTCCATTGTTACCCAGGGCAGGGGTACAGGGGAAGCTaGAGCTATTACTGGATCCGAGTCTGGCCTCGGGCA +
Preference number: 3 (lower is better)
Translates to: VHCYPGQGYRGS*SYYWIRVWPRA
Trigger: TGCCCGAGGCCAGACTCGGATCCAGTAATAGCTGCAGCTTCCCCTGTACCCCTGCCCTGGGTAACAATGGAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR CCA 72 bp CTATTACTGGATCCGAGTCTGGCCTCGGGCAGGTGCTaGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCC +
Preference number: 3 (lower is better)
Translates to: LLLDPSLASGRC*TAIGATVALFS
Trigger: GGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGATCCAGTAATAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR TCA 72 bp TTGCCCCCATGGCGGGTGGGGGAAAGAGAATGTATGTaGTGGCACCTGCCTGCTTCTGTGGGCTCATCTGCA +
Preference number: 3 (lower is better)
Translates to: LPPWRVGERECM*WHLPASVGSSA
Trigger: TGCAGATGAGCCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCATGGGGGCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR TCA 72 bp GGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTaGGCAAGGGCAGGACTACTGTGGGATGAAAGATGC +
Preference number: 3 (lower is better)
Translates to: GPGSTQICWFQI*ARAGLLWDERC
Trigger: GCATCTTTCATCCCACAGTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR GCA 72 bp TATGTGATGGCACCTGCCTGCTTCTGTGGGCTCATCTaGAGCTCTAGCCTGGATTCTGCCCCAACCCCAAAC +
Preference number: 3 (lower is better)
Translates to: YVMAPACFCGLI*SSSLDSAPTPN
Trigger: GTTTGGGGTTGGGGCAGAATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGGCAGGTGCCATCACATA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR CCA 72 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATaGGGCTTGCCCCCATGGCGGGTGGGGGAAAGAGAA +
Preference number: 3 (lower is better)
Translates to: ERCQEVTGQAHQ*GLPPWRVGERE
Trigger: TTCTCTTTCCCCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR GCA 72 bp GGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTaGTTCTGTGGGCTCATCTGCAGCTCTAGCCTGGAT +
Preference number: 3 (lower is better)
Translates to: GGGKRMYVMAPA*FCGLICSSSLD
Trigger: ATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR CCA 72 bp CTGCCTGCTTCTGTGGGCTCATCTGCAGCTCTAGCCTaGATTCTGCCCCAACCCCAAACAGACAAGACAAAG +
Preference number: 3 (lower is better)
Translates to: LPASVGSSAALA*ILPQPQTDKTK
Trigger: CTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR-3UTR CAA 90 bp CTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCGGGGCCACCGTGGCCTaGTTTTCCTCCCTTGTCTGG +
Preference number: 3 (lower is better)
Translates to: LVSAAYLPSSYHLLSMSTGATVA*FSSLVW
Trigger: CCAGACAAGGGAGGAAAACAAGGCCACGGTGGCCCC...GGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR GCA 72 bp CAAAGTCAAATAAAGAAGCTGTCTGACTGCTGTCTGTaGTGCTCTCTGAACTCCACGGGCCAGATGTGCGTG +
Preference number: 3 (lower is better)
Translates to: QSQIKKLSDCCL*CSLNSTGQMCV
Trigger: CACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTGACTTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR TCA 72 bp GTTTCAGATCTGAGCAAGGGCAGGACTACTGTGGGATaGAAGATGCCAAGAAGTTACTGGACAAGCCCACCA +
Preference number: 3 (lower is better)
Translates to: VSDLSKGRTTVG*KMPRSYWTSPP
Trigger: TGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTCATCCCACAGTAGTCCTGCCCTTGCTCAGATCTGAAAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR TCA 72 bp CAAACAGACAAGACAAAGTCAAATAAAGAAGCTGTCTaGCTGCTGTCTGTGCTGCTCTCTGAACTCCACGGG +
Preference number: 3 (lower is better)
Translates to: QTDKTKSNKEAV*LLSVLLSELHG
Trigger: CCCGTGGAGTTCAGAGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR GCA 72 bp CCTAAGTTATTACCTCTCTTGTTTCTGCAGCATACTTaGCCTCTAGCTACCATCTGCTTTCTATGTCCACCA +
Preference number: 3 (lower is better)
Translates to: PKLLPLLFLQHT*PLATICFLCPP
Trigger: TGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAGAGAGGTAATAACTTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR GCA 72 bp TTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTaGTTTCTATGTCCACCATCAATAATTTATATGGGG +
Preference number: 3 (lower is better)
Translates to: LFLQHTCPLATI*FLCPPSIIYMG
Trigger: CCCCATATAAATTATTGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGGCCCCACGGGACACCTaGTGCCCAGCCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: RAGAGQQLGPPWPCFPPLAPRDT*CPAWDS
Trigger: GGAGTCCCAGGCTGGGCAGCAGGTGTCCCGTGGGGC...CAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp AAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGGGCATGGCCCCCTGACATaGAGCGGACCCGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: KKLLDKPTNGACPHGGWGHGPLT*SGPGPG
Trigger: CCCGGGACCGGGTCCGCTCCATGTCAGGGGGCCATG...CCCCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp ATCCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTCATCCACGGAGGAAATaGGGCGCTTCCGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: IRVWPRAGAGQQLGPPWPHPRRK*GASAGL
Trigger: CAGGCCAGCGGAAGCGCCTCATTTCCTCCGTGGATG...AGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGAT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGGCCAGGCAGCACGCAGATCTGGGCAGGCCCAGTCGATaGAGCGAGTCAGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: PPWPCFPPLSGARQHADLGRPSR*SESARS
Trigger: ACTGCGGGCTGACTCGCTGCATCGACTGGGCCTGCC...CAGATCTGCGTGCTGCCTGGCCCCAGACAAGGGAGGAAAACAAGGCCACGGTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGGCGCTGTGGCCCAGGTaGGTGCCCAGAAGGTTACGC +
Preference number: 4 (lower is better)
Translates to: PRSYWTSPPMGLAPMAGGALWPR*VPRRLR
Trigger: GCGTAACCTTCTGGGCACCCACCTGGGCCACAGCGC...CCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGG
64% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGAGACTGTTGAAGTGGTaGGTGTGGCACCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: PSLASGRCWTAIGATVALRLLKW*VWHPSA
Trigger: GGCAGAGGGGTGCCACACCCACCACTTCAACAGTCT...CAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTGCCACCGCCGTCTGTaGTCCCAGAGAAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: LASGRCWTAIGATVALFSCHRRL*SQRSRA
Trigger: GGCTCTGCTTCTCTGGGACCACAGACGGCGGTGGCA...GGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp AAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGGGGCTTGGTCTGAAGGATaGCCAGGAGCCCCAGGACCG +
Preference number: 4 (lower is better)
Translates to: KKLLDKPTNGACPHGGWGAWSEG*PGAPGP
Trigger: CGGTCCTGGGGCTCCTGGTCATCCTTCAGACCAAGC...CCCCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTT
63% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGCTTGCTCAAAGGCTGTaGGGGTTGGAAGGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: PSLASGRCWTAIGATVALLAQRL*GLEGEV
Trigger: GACCTCTCCTTCCAACCCTCACAGCCTTTGAGCAAG...CAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp ATCCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTGGAGCGGGATGGCCATaGTGGCTGTGGCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: IRVWPRAGAGQQLGPPWPGAGWP*WLWQKC
Trigger: ACATTTCTGCCACAGCCAGCATGGCCATCCCGCTCC...AGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp GGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGCCACGGGACACCTGCTaGCCAGCCTGGGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: GAGQQLGPPWPCFPPLSGPRDTC*PAWDSS
Trigger: ACTGGAGTCCCAGGCTGGGCAGCAGGTGTCCCGTGG...CCCAGACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCGGGAGGCCGAGTGCATaGCCAGGTCCCTTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: LASGRCWTAIGATVALFSGRPSA*PGPFLP
Trigger: TGGAAGAAAGGGACCTGGCCATGCACTCGGCCTCCC...GGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp ATCCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTGCGGGATGGCCATGCTaGCTGTGGCAGAAATGTGTG +
Preference number: 4 (lower is better)
Translates to: IRVWPRAGAGQQLGPPWPAGWPC*LWQKCV
Trigger: CACACATTTCTGCCACAGCCAGCATGGCCATCCCGC...AGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTCATGGCCCCCTGACATaGAGCGGACCCGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFHGPLT*SGPGPG
Trigger: CCCGGGACCGGGTCCGCTCCATGTCAGGGGGCCATG...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGCCAACTCGAAGGCCATaGCCCCCTGACATGGAGCGG +
Preference number: 4 (lower is better)
Translates to: PRSYWTSPPMGLAPMAGGPTRRP*PPDMER
Trigger: CCGCTCCATGTCAGGGGGCCATGGCCTTCGAGTTGG...CCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGGCCAGGCAGCACGCAGATCTGCTCTTCACCCGTAGCTaGCCAGGTAGCTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: PPWPCFPPLSGARQHADLLFTRS*PGSCFP
Trigger: GGGGAAGCAGCTACCTGGTCAGCTACGGGTGAAGAG...CAGATCTGCGTGCTGCCTGGCCCCAGACAAGGGAGGAAAACAAGGCCACGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGGGAATGTGGGAGAGCTaGGAGATGACCACCGAGTTA +
Preference number: 4 (lower is better)
Translates to: PSLASGRCWTAIGATVALGMWES*EMTTEL
Trigger: TAACTCGGTGGTCATCTCGCAGCTCTCCCACATTCC...CAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGGCCCCACGGGACACCTaGTGCCCAGCCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWAPRDT*CPAWDS
Trigger: GGAGTCCCAGGCTGGGCAGCAGGTGTCCCGTGGGGC...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAGCCCCACGGGACACCTaGTGCCCAGCCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLAPRDT*CPAWDS
Trigger: GGAGTCCCAGGCTGGGCAGCAGGTGTCCCGTGGGGC...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTTGAAGTGGTGGGTGTaGCACCCCTCTGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: RAGAGQQLGPPWPCFPPLLKWWV*HPSARS
Trigger: GGACCTGGCAGAGGGGTGCCACACCCACCACTTCAA...CAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTCCAACTCGAAGGCCATaGCCCCCTGACATGGAGCGG +
Preference number: 4 (lower is better)
Translates to: GARQHADLLVSDLSKGRTPTRRP*PPDMER
Trigger: CCGCTCCATGTCAGGGGGCCATGGCCTTCGAGTTGG...AGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGTCTGCTGTTGGAAGCTaGGCTCCTGCAGGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: PRSYWTSPPMGLAPMAGGSAVGS*APAGGF
Trigger: GAAGCCCCCTGCAGGAGCCCAGCTTCCAACAGCAGA...CCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp ATCCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTAAAGGCTGTGAGGGTTaGAAGGAGAGGTCCACGGCA +
Preference number: 4 (lower is better)
Translates to: IRVWPRAGAGQQLGPPWPKGCEG*KERSTA
Trigger: TGCCGTGGACCTCTCCTTCCAACCCTCACAGCCTTT...AGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp ATCCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTCAATCTTGGCCACACTaGTGTCCACGAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: IRVWPRAGAGQQLGPPWPQSWPH*CPRGLP
Trigger: TGGAAGGCCTCGTGGACACCAGTGTGGCCAAGATTG...AGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGAT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCCATGTTGTTGATGTCTaGGGAGAAGGGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: LASGRCWTAIGATVALFSHVVDV*GEGAER
Trigger: CCGCTCAGCCCCTTCTCCTCAGACATCAACAACATG...GGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGGCCAGGCAGCACGCAGATCTGCATGCCAGCAGTAGGTaGACTGTCCATCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: PPWPCFPPLSGARQHADLHASSR*TVHPRH
Trigger: GTGGCGAGGATGGACAGTTCACCTACTGCTGGCATG...CAGATCTGCGTGCTGCCTGGCCCCAGACAAGGGAGGAAAACAAGGCCACGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCCATGTTCAGATACACTaGTGCTGCGGCACCGGAAGG +
Preference number: 4 (lower is better)
Translates to: LASGRCWTAIGATVALFSHVQIH*CCGTGR
Trigger: CCTTCCGGTGCCGCAGCATCAGTGTATCTGAACATG...GGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGGCTGGCATACTGCTCTaGAGCAAAGTTCCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: PSLASGRCWTAIGATVALAGILL*SKVPVE
Trigger: CTCTACAGGAACTTTGCTGCAGAGCAGTATGCCAGC...CAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGCCACGGGACACCTGCTaGCCAGCCTGGGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGPRDTC*PAWDSS
Trigger: ACTGGAGTCCCAGGCTGGGCAGCAGGTGTCCCGTGG...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGAGATGGCAAACACGCTaGCATACTGCTCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: PSLASGRCWTAIGATVALRWQTR*HTALQQ
Trigger: TTGCTGCAGAGCAGTATGCCAGCGTGTTTGCCATCT...CAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGTCTGCTGTTGGAAGCTaGGCTCCTGCAGGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: GAGQQLGPPWPCFPPLSGSAVGS*APAGGF
Trigger: GAAGCCCCCTGCAGGAGCCCAGCTTCCAACAGCAGA...CCCAGACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGCGTCTTCTCTGCTGTTaGAAGCTGGGCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PRSYWTSPPMGLAPMAGGRLLCC*KLGSCR
Trigger: CCTGCAGGAGCCCAGCTTCCAACAGCAGAGAAGACG...CCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGG
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTGGGAGCGGGGAGAACTaGAAGGCAGAGGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: GARQHADLLVSDLSKGRTGSGEN*KAEDLQ
Trigger: CTGAAGGTCCTCTGCCTTCCAGTTCTCCCCGCTCCC...AGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp AAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGGGGAGCGGAATCAGAGATaGTATAGCCTCGGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: KKLLDKPTNGACPHGGWGERNQR*YSLGAG
Trigger: TCCGGCCCCGAGGCTATACCATCTCTGATTCCGCTC...CCCCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTT
61% GC, longest homopolymer 6 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp ATCCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTCCACATCCTTGGTaGGCATCAGGGTGGCAATGT +
Preference number: 4 (lower is better)
Translates to: IRVWPRAGAGQQLGPPWPCPHPW*ASGWQC
Trigger: ACATTGCCACCCTGATGCCCACCAAGGATGTGGACA...AGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCGCTTGTCCACATCCTTaGTGGGCATCAGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: LASGRCWTAIGATVALFSACPHP*WASGWQ
Trigger: TTGCCACCCTGATGCCCACCAAGGATGTGGACAAGC...GGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
3UTR CAA 72 bp ATCCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATaGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTCT +
Preference number: 4 (lower is better)
Translates to: IRVWPRAGAGQQ*GPPWPCFPPLS
Trigger: AGACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGAT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGGCCAGGCAGCACGCAGATCTGATGTGGGGGAGTTCTTaGGAGAGTAGAGCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: PPWPCFPPLSGARQHADLMWGSS*ESRAGE
Trigger: CTCACCGGCTCTACTCTCTCAAGAACTCCCCCACAT...CAGATCTGCGTGCTGCCTGGCCCCAGACAAGGGAGGAAAACAAGGCCACGGTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp GGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTACAGGTCCACCAGCAGCTaGGTAGCCAGCTTTCGGACC +
Preference number: 4 (lower is better)
Translates to: GQAARRSAGFRSEQGQDYRSTSS*VASFRT
Trigger: GGTCCGAAAGCTGGCTACTCAGCTGCTGGTGGACCT...GTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGAAGGGTCTTTGGAGCTaGAAGCATGGAGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: PRSYWTSPPMGLAPMAGGKGLWS*KHGAEG
Trigger: GCCCTCTGCTCCATGCTTTCAGCTCCAAAGACCCTT...CCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp GGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGTGGTGCTCCGTGCTCTaGAACTGTCCTTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: GAGQQLGPPWPCFPPLSGWCSVL*NCPSQG
Trigger: CCCCTGAGAAGGACAGTTTCAGAGCACGGAGCACCA...CCCAGACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTCATCCACGGAGGAAATaGGGCGCTTCCGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFHPRRK*GASAGL
Trigger: CAGGCCAGCGGAAGCGCCTCATTTCCTCCGTGGATG...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp AAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGGGGACAGCCTTCCAAAGTaGCTCCACTGCATGCTCCTC +
Preference number: 4 (lower is better)
Translates to: KKLLDKPTNGACPHGGWGDSLPK*LHCMLL
Trigger: GAGGAGCATGCAGTGGAGGCACTTTGGAAGGCTGTC...CCCCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCGGAATGTGGGAGAGCTaGGAGATGACCACCGAGTTA +
Preference number: 4 (lower is better)
Translates to: LASGRCWTAIGATVALFSGMWES*EMTTEL
Trigger: TAACTCGGTGGTCATCTCGCAGCTCTCCCACATTCC...GGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp GGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTGGAGCGGGATGGCCATaGTGGCTGTGGCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: GARQHADLLVSDLSKGRTGAGWP*WLWQKC
Trigger: ACATTTCTGCCACAGCCAGCATGGCCATCCCGCTCC...AGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTACCACGGGACACCTGCTaGCCAGCCTGGGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLPRDTC*PAWDSS
Trigger: ACTGGAGTCCCAGGCTGGGCAGCAGGTGTCCCGTGG...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp ATCCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTCAAAGGCACATAGGCTaGCAGATTCGTCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: IRVWPRAGAGQQLGPPWPQRHIG*QIRLLC
Trigger: GCAGAGAAGACGAATCTGGCAGCCTATGTGCCTTTG...AGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGAT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CCTGCTTCTGTGGGCTCATCTGCAGCTCTAGCCTGGATTCTGCCCCAACCCCAAGGATGGCCAGCTCACTaGTGCTCTGGCCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: PASVGSSAALAWILPQPQGWPAH*CSGLLP
Trigger: TGGGAGAAGGCCAGAGCAGCAGTGAGCTGGCCATCC...TTGGGGTTGGGGCAGAATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGCCTTGGCAGGGTGGATaGACTGGGCTCTGTAGGATA +
Preference number: 4 (lower is better)
Translates to: PRSYWTSPPMGLAPMAGGPWQGG*TGLCRI
Trigger: TATCCTACAGAGCCCAGTCCATCCACCCTGCCAAGG...CCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTACTTGAAGTGGTGGGTGTaGCACCCCTCTGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: GQAARRSAGFRSEQGQDYLKWWV*HPSARS
Trigger: GGACCTGGCAGAGGGGTGCCACACCCACCACTTCAA...GTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CCTGCTTCTGTGGGCTCATCTGCAGCTCTAGCCTGGATTCTGCCCCAACCCCAACTCGAGTGGCGTGGCTaGCAGGCAAGGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: PASVGSSAALAWILPQPQLEWRG*QARCRA
Trigger: AGCTCTACACCTTGCCTGCCAGCCACGCCACTCGAG...TTGGGGTTGGGGCAGAATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGACTCCAGGAGCGGGATaGCCATGCTGGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGTPGAG*PCWLWQ
Trigger: CTGCCACAGCCAGCATGGCCATCCCGCTCCTGGAGT...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTCAACCAGCCAGGTTTTaGTCCTACCCCCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: GARQHADLLVSDLSKGRTQPARF*SYPLPG
Trigger: TCCTGGCAGGGGGTAGGACCAAAACCTGGCTGGTTG...AGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGCACCTGAGTCTCTCCTaGACTTCCCTCCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: RAGAGQQLGPPWPCFPPLHLSLS*TSLLKD
Trigger: GTCCTTGAGGAGGGAAGTCCAGGAGAGACTCAGGTG...CAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CCTGCTTCTGTGGGCTCATCTGCAGCTCTAGCCTGGATTCTGCCCCAACCCCAAGCACCTTCTCAGCACTaGAGGCCGCAGCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PASVGSSAALAWILPQPQAPSQH*RPQLCS
Trigger: AGAGCAGAGCTGCGGCCTCCAGTGCTGAGAAGGTGC...TTGGGGTTGGGGCAGAATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGGCTTGTCCACATCCTTaGTGGGCATCAGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: RAGAGQQLGPPWPCFPPLACPHP*WASGWQ
Trigger: TTGCCACCCTGATGCCCACCAAGGATGTGGACAAGC...CAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGCAATCTTGGCCACACTaGTGTCCACGAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RAGAGQQLGPPWPCFPPLQSWPH*CPRGLP
Trigger: TGGAAGGCCTCGTGGACACCAGTGTGGCCAAGATTG...CAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTACGGGGGTGGAGAGAGTaGGCGCGCCATCACCTTTTC +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLRGWRE*ARHHLF
Trigger: GAAAAGGTGATGGCGCGCTCACTCTCTCCACCCCCG...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR TCA 90 bp GGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGCTTGCTCAAAGGCTGTaGGGGTTGGAAGGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: GAGQQLGPPWPCFPPLSGLAQRL*GLEGEV
Trigger: GACCTCTCCTTCCAACCCTCACAGCCTTTGAGCAAG...CCCAGACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGGTAGCCTCAGGGGCTTaGGCTGGGGCTTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWVASGA*AGALVW
Trigger: CCACACCAAAGCCCCAGCTCAAGCCCCTGAGGCTAC...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGGCCAGGCAGCACGCAGATCTGAATGGGGATACCCCCTaGAGCAAGCTCCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: PPWPCFPPLSGARQHADLNGDTP*SKLLQM
Trigger: CATTTGGAGGAGCTTGCTGCAGGGGGTATCCCCATT...CAGATCTGCGTGCTGCCTGGCCCCAGACAAGGGAGGAAAACAAGGCCACGGTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGGCCAGGCAGCACGCAGATCTGTGCACACCTGGGATTTaGCCTCGATGTTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: PPWPCFPPLSGARQHADLCTPGI*PRCSQS
Trigger: GGATTGGGAACATCGAGGCCAAATCCCAGGTGTGCA...CAGATCTGCGTGCTGCCTGGCCCCAGACAAGGGAGGAAAACAAGGCCACGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTACAGACTGTTGAAGTGGTaGGTGTGGCACCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: GQAARRSAGFRSEQGQDYRLLKW*VWHPSA
Trigger: GGCAGAGGGGTGCCACACCCACCACTTCAACAGTCT...GTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTCGACCCCATCCTTGTTaGGCAGGCCCAGTCGATGCA +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFRPHPC*AGPVDA
Trigger: TGCATCGACTGGGCCTGCCCAACAAGGATGGGGTCG...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAGGGCAGAAGACAGCTaGTCGACACTGCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFRAEDS*STLQGE
Trigger: CTCCCCCTGCAGTGTCGACCAGCTGTCTTCTGCCCT...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp GGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGAGCTCATCAGCCAGCTaGTGTTTCCTGTGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: GAGQQLGPPWPCFPPLSGSSSAS*CFLWVC
Trigger: GCAGACCCACAGGAAACACCAGCTGGCTGATGAGCT...CCCAGACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTCACCTGAGTCTCTCCTaGACTTCCCTCCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: GARQHADLLVSDLSKGRTHLSLS*TSLLKD
Trigger: GTCCTTGAGGAGGGAAGTCCAGGAGAGACTCAGGTG...AGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTGCTAGGGTTGATGCCTaGCACCTTCTCAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: GARQHADLLVSDLSKGRTARVDA*HLLSTG
Trigger: TCCAGTGCTGAGAAGGTGCCAGGCATCAACCCTAGC...AGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGAGCTCACTGCTGCTCTaGCCTTCTCCCACATACAGG +
Preference number: 4 (lower is better)
Translates to: GAGQQLGPPWPCFPPLSGSSLLL*PSPTYR
Trigger: CCTGTATGTGGGAGAAGGCCAGAGCAGCAGTGAGCT...CCCAGACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGCTTGAGCTGGGGCTTTaGTGTGGGCTGGAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGLELGL*CGLEGA
Trigger: TGCACCCTCCAGCCCACACCAAAGCCCCAGCTCAAG...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGAGGATCTGTCCTCCATaGTGCGGCACATGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: RAGAGQQLGPPWPCFPPLRICPP*CGTCCR
Trigger: TCTACAACATGTGCCGCATCATGGAGGACAGATCCT...CAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGAGGTCCACCAGCAGCTaGGTAGCCAGCTTTCGGACC +
Preference number: 4 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWRSTSS*VASFRT
Trigger: GGTCCGAAAGCTGGCTACTCAGCTGCTGGTGGACCT...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTACTCTTCACCCGTAGCTaGCCAGGTAGCTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLLFTRS*PGSCFP
Trigger: GGGGAAGCAGCTACCTGGTCAGCTACGGGTGAAGAG...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp CGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGCCAACATCCATCCACTaGAGGACAAACTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: RAGAGQQLGPPWPCFPPLPTSIH*RTNSAS
Trigger: ACTGGCAGAGTTTGTCCTGCAGTGGATGGATGTTGG...CAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGTCCTGCTTCAAACACTaGAACAGGACACGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: PRSYWTSPPMGLAPMAGGSCFKH*NRTRKS
Trigger: GCTCTTCCGTGTCCTGTTGCAGTGTTTGAAGCAGGA...CCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGCGGGCATCTCCACACTaGAGATGGCCAAGGCTACCA +
Preference number: 4 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGRASPH*RWPRLP
Trigger: TGGTAGCCTTGGCCATCTGCAGTGTGGAGATGCCCG...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAGTGTGGGCTGGAGGGTaGATCAGAGGCAAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLVWAGG*IRGKLG
Trigger: CCCAAGCTTGCCTCTGATGCACCCTCCAGCCCACAC...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTATTGAAGTGGTGGGTGTaGCACCCCTCTGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLLKWWV*HPSARS
Trigger: GGACCTGGCAGAGGGGTGCCACACCCACCACTTCAA...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTCTGTGAGCTCCAAGTaGAGATTCTTCAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: PSLASGRCWTAIGATVALSVSSK*RFFKLS
Trigger: TGACAACTTGAAGAATCTCCACTTGGAGCTCACAGA...CAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGGGGAGCGGGGAGAACTaGAAGGCAGAGGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWGSGEN*KAEDLQ
Trigger: CTGAAGGTCCTCTGCCTTCCAGTTCTCCCCGCTCCC...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGGCCAGGCAGCACGCAGATCTGTGGTGGGCATCAGGGTaGCAATGTGGAAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: PPWPCFPPLSGARQHADLWWASG*QCGKQL
Trigger: AAGCTGTTTTCCACATTGCCACCCTGATGCCCACCA...CAGATCTGCGTGCTGCCTGGCCCCAGACAAGGGAGGAAAACAAGGCCACGGTGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CCTGCTTCTGTGGGCTCATCTGCAGCTCTAGCCTGGATTCTGCCCCAACCCCAAGGGTTGGATCGGCTGTaGTGTACCTGTGAGGCCATA +
Preference number: 4 (lower is better)
Translates to: PASVGSSAALAWILPQPQGLDRL*CTCEAI
Trigger: TATGGCCTCACAGGTACACCACAGCCGATCCAACCC...TTGGGGTTGGGGCAGAATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCATGGACGATGGTCTTaGGTTCCGGGCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWHGRWS*VPGCPG
Trigger: ACCTGGACAGCCCGGAACTCAAGACCATCGTCCATG...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTACATGGACGATGGTCTTaGGTTCCGGGCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLHGRWS*VPGCPG
Trigger: ACCTGGACAGCCCGGAACTCAAGACCATCGTCCATG...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR TCA 90 bp TCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTACTGTGGGATGAAAGATGCCGTAGCCTCAGGGGCTTaGGCTGGGGCTTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: SAGFRSEQGQDYCGMKDAVASGA*AGALVW
Trigger: CCACACCAAAGCCCCAGCTCAAGCCCCTGAGGCTAC...GGCATCTTTCATCCCACAGTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGGACAGCCTTCCAAAGTaGCTCCACTGCATGCTCCTC +
Preference number: 4 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGDSLPK*LHCMLL
Trigger: GAGGAGCATGCAGTGGAGGCACTTTGGAAGGCTGTC...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAGGAGCGGGATGGCCATaGTGGCTGTGGCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLGAGWP*WLWQKC
Trigger: ACATTTCTGCCACAGCCAGCATGGCCATCCCGCTCC...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp GGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTAACACGCTGGCATACTaGTCTGCAGCAAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: GARQHADLLVSDLSKGRTNTLAY*SAAKFL
Trigger: CAGGAACTTTGCTGCAGAGCAGTATGCCAGCGTGTT...AGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCCCCACGGGACACCTaGTGCCCAGCCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGAPRDT*CPAWDS
Trigger: GGAGTCCCAGGCTGGGCAGCAGGTGTCCCGTGGGGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGCCCCACGGGACACCTaGTGCCCAGCCTGGGACTCC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATAPRDT*CPAWDS
Trigger: GGAGTCCCAGGCTGGGCAGCAGGTGTCCCGTGGGGC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTCTTTCCTGCGAGCCATaGAACTCGTTCTGGTCACAT +
Preference number: 4 (lower is better)
Translates to: GARQHADLLVSDLSKGRTLSCEP*NSFWSH
Trigger: ATGTGACCAGAACGAGTTCCATGGCTCGCAGGAAAG...AGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGCCTTGGCAGGGTGGATaGACTGGGCTCTGTAGGATA +
Preference number: 4 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGPWQGG*TGLCRI
Trigger: TATCCTACAGAGCCCAGTCCATCCACCCTGCCAAGG...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTTTGGAGCTGAAAGCATaGAGCAGAGGGCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: GARQHADLLVSDLSKGRTLELKA*SRGQKT
Trigger: TGTCTTCTGCCCTCTGCTCCATGCTTTCAGCTCCAA...AGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGTTGGAGCTGAAAGCATaGAGCAGAGGGCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: GAGQQLGPPWPCFPPLSGLELKA*SRGQKT
Trigger: TGTCTTCTGCCCTCTGCTCCATGCTTTCAGCTCCAA...CCCAGACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp AAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGGGAAGTTGTCATCAGCCTaGGCCATAGAGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: KKLLDKPTNGACPHGGWGKLSSA*AIEFSS
Trigger: GGATGAGAACTCTATGGCCCAGGCTGATGACAACTT...CCCCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTT
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTACAACCAGCCAGGTTTTaGTCCTACCCCCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLQPARF*SYPLPG
Trigger: TCCTGGCAGGGGGTAGGACCAAAACCTGGCTGGTTG...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTCCTGGGACTCCAGTTTaGCCGGTGCTTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFPGTPV*PVLPLS
Trigger: AGACAAAGGAAGCACCGGCCAAACTGGAGTCCCAGG...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACATGGCCCCCTGACATaGAGCGGACCCGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGHGPLT*SGPGPG
Trigger: CCCGGGACCGGGTCCGCTCCATGTCAGGGGGCCATG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACATGGCCCCCTGACATaGAGCGGACCCGGTCCCGGG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATHGPLT*SGPGPG
Trigger: CCCGGGACCGGGTCCGCTCCATGTCAGGGGGCCATG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGATCCCAACAGTATCTTaGACTTCTCCTTCAAGCCGG +
Preference number: 4 (lower is better)
Translates to: GAGQQLGPPWPCFPPLSGIPTVS*TSPSSR
Trigger: CCGGCTTGAAGGAGAAGTTCAAGATACTGTTGGGAT...CCCAGACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGATGTGGGGGAGTTCTTaGGAGAGTAGAGCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWMWGSS*ESRAGE
Trigger: CTCACCGGCTCTACTCTCTCAAGAACTCCCCCACAT...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CCTGCTTCTGTGGGCTCATCTGCAGCTCTAGCCTGGATTCTGCCCCAACCCCAATGCGGCACTCATTCCTaGAGAACCTCTCCATCAACA +
Preference number: 4 (lower is better)
Translates to: PASVGSSAALAWILPQPQCGTHS*RTSPST
Trigger: TGTTGATGGAGAGGTTCTTCAGGAATGAGTGCCGCA...TTGGGGTTGGGGCAGAATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp GGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTACTGGCTTTCTTCTCTaGGGCTCTATCCAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: GARQHADLLVSDLSKGRTTGFLL*GSIQFH
Trigger: ATGGAACTGGATAGAGCCTCAGAGAAGAAAGCCAGT...AGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGAAGGGTCTTTGGAGCTaGAAGCATGGAGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWKGLWS*KHGAEG
Trigger: GCCCTCTGCTCCATGCTTTCAGCTCCAAAGACCCTT...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CTCTCCCACAGGGGACCTCTTGGGGACTGCAGTGAAATTGGAGAACACATATCGTGGTGCTCCGTGCTCTaGAACTGTCCTTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: LSHRGPLGDCSEIGEHISWCSVL*NCPSQG
Trigger: CCCCTGAGAAGGACAGTTTCAGAGCACGGAGCACCA...CGATATGTGTTCTCCAATTTCACTGCAGTCCCCAAGAGGTCCCCTGTGGGAGAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227658.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGGTGTGGCACCCCTCTaGCAGGTCCACCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAGVAPL*QVHQQL
Trigger: CAGCTGCTGGTGGACCTGGCAGAGGGGTGCCACACC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGGCAGGCCCAGTCGATaGAGCGAGTCAGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAGRPSR*SESARS
Trigger: ACTGCGGGCTGACTCGCTGCATCGACTGGGCCTGCC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CCTGCTTCTGTGGGCTCATCTGCAGCTCTAGCCTGGATTCTGCCCCAACCCCAAGCTGGCATACTGCTCTaGAGCAAAGTTCCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: PASVGSSAALAWILPQPQAGILL*SKVPVE
Trigger: CTCTACAGGAACTTTGCTGCAGAGCAGTATGCCAGC...TTGGGGTTGGGGCAGAATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAATGGGGATACCCCCTaGAGCAAGCTCCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFNGDTP*SKLLQM
Trigger: CATTTGGAGGAGCTTGCTGCAGGGGGTATCCCCATT...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp GGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGACTTCTAGCCTTTCATaGAGGTCTTCATTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: GAGQQLGPPWPCFPPLSGTSSLS*RSSLEG
Trigger: CCCCTCCAATGAAGACCTCCATGAAAGGCTAGAAGT...CCCAGACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGCGCTGTGGCCCAGGTaGGTGCCCAGAAGGTTACGC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAALWPR*VPRRLR
Trigger: GCGTAACCTTCTGGGCACCCACCTGGGCCACAGCGC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAGCTCCTCTCAGCAGTaGGGCATCTTCCATGTAGGA +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFSSSQQ*GIFHVG
Trigger: TCCTACATGGAAGATGCCCCACTGCTGAGAGGAGCT...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTACCTTGGCAGGGTGGATaGACTGGGCTCTGTAGGATA +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLPWQGG*TGLCRI
Trigger: TATCCTACAGAGCCCAGTCCATCCACCCTGCCAAGG...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CAAATAAAGAAGCTGTCTGACTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCAGGGCAGAAGACAGCTaGTCGACACTGCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QIKKLSDCCLCCSLNSTGRAEDS*STLQGE
Trigger: CTCCCCCTGCAGTGTCGACCAGCTGTCTTCTGCCCT...GCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTGGAGGGGTTGGTGTATaGCAAGGAGATGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFGGVGV*QGDGKH
Trigger: GTGTTTGCCATCTCCTTGCCATACACCAACCCCTCC...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGGCTAGGGTTGATGCCTaGCACCTTCTCAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWARVDA*HLLSTG
Trigger: TCCAGTGCTGAGAAGGTGCCAGGCATCAACCCTAGC...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAGCTAGGGTTGATGCCTaGCACCTTCTCAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLARVDA*HLLSTG
Trigger: TCCAGTGCTGAGAAGGTGCCAGGCATCAACCCTAGC...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAAGCTCACTGCTGCTCTaGCCTTCTCCCACATACAGG +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLSSLLL*PSPTYR
Trigger: CCTGTATGTGGGAGAAGGCCAGAGCAGCAGTGAGCT...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAGCTTGTCCACATCCTTaGTGGGCATCAGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLACPHP*WASGWQ
Trigger: TTGCCACCCTGATGCCCACCAAGGATGTGGACAAGC...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAGGGTTGGATCGGCTGTaGTGTACCTGTGAGGCCATA +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLGLDRL*CTCEAI
Trigger: TATGGCCTCACAGGTACACCACAGCCGATCCAACCC...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR TCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTCATAGAACTGCCTGTTaGTCAGCAGCACGAAGGACA +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFHRTAC*SAARRT
Trigger: TGTCCTTCGTGCTGCTGATCAACAGGCAGTTCTATG...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGCTTGGTCTGAAGGATaGCCAGGAGCCCCAGGACCG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAAWSEG*PGAPGP
Trigger: CGGTCCTGGGGCTCCTGGTCATCCTTCAGACCAAGC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACTCCGGCAGCCTGCTaGGCACCAGCTTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLATPAAC*APASAP
Trigger: AGGTGCTGAAGCTGGTGCTCAGCAGGCTGCCGGAGT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGAGAGCCATGCTCATTTaGCAGGATGGCCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWRAMLI*QDGQLT
Trigger: AGTGAGCTGGCCATCCTGTCAAATGAGCATGGCTCT...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGTAGCCTCAGGGGCTTaGGCTGGGGCTTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAVASGA*AGALVW
Trigger: CCACACCAAAGCCCCAGCTCAAGCCCCTGAGGCTAC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCATCCACGGAGGAAATaGGGCGCTTCCGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAHPRRK*GASAGL
Trigger: CAGGCCAGCGGAAGCGCCTCATTTCCTCCGTGGATG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp AAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGGGAAGCTTCTTAGTTTTTaGCACATCACAGATCTGCCC +
Preference number: 4 (lower is better)
Translates to: KKLLDKPTNGACPHGGWGKLLSF*HITDLP
Trigger: GGGCAGATCTGTGATGTGGCAAAAACTAAGAAGCTT...CCCCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTACAGCATCCAGCACTTaGAAGGACACCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFTASST*KDTSMS
Trigger: GGACATTGAGGTGTCCTTGCAAGTGCTGGATGCTGT...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAGGAATGTGGGAGAGCTaGGAGATGACCACCGAGTTA +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLGMWES*EMTTEL
Trigger: TAACTCGGTGGTCATCTCGCAGCTCTCCCACATTCC...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGTGTGGCACCCCTCTaGCAGGTCCACCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATGVAPL*QVHQQL
Trigger: CAGCTGCTGGTGGACCTGGCAGAGGGGTGCCACACC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGGTGTGGCACCCCTCTaGCAGGTCCACCAGCAGCTG +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLGVAPL*QVHQQL
Trigger: CAGCTGCTGGTGGACCTGGCAGAGGGGTGCCACACC...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAGGCAGGCCCAGTCGATaGAGCGAGTCAGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: FLQHTCPLATICFLCPPSGRPSR*SESARS
Trigger: ACTGCGGGCTGACTCGCTGCATCGACTGGGCCTGCC...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGCAGGCCCAGTCGATaGAGCGAGTCAGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATGRPSR*SESARS
Trigger: ACTGCGGGCTGACTCGCTGCATCGACTGGGCCTGCC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGGCAGGCCCAGTCGATaGAGCGAGTCAGCCCGCAGT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGGRPSR*SESARS
Trigger: ACTGCGGGCTGACTCGCTGCATCGACTGGGCCTGCC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CAAATAAAGAAGCTGTCTGACTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCGGGCATCTCCACACTaGAGATGGCCAAGGCTACCA +
Preference number: 4 (lower is better)
Translates to: QIKKLSDCCLCCSLNSTGRASPH*RWPRLP
Trigger: TGGTAGCCTTGGCCATCTGCAGTGTGGAGATGCCCG...GCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGAATCCGAGCCACCCTaGAGGTCCCCAGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAESEPP*RSPESR
Trigger: CCTGGACTCTGGGGACCTGCAGGGTGGCTCGGATTC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACCACGGGACACCTGCTaGCCAGCCTGGGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGPRDTC*PAWDSS
Trigger: ACTGGAGTCCCAGGCTGGGCAGCAGGTGTCCCGTGG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACCACGGGACACCTGCTaGCCAGCCTGGGACTCCAGT +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATPRDTC*PAWDSS
Trigger: ACTGGAGTCCCAGGCTGGGCAGCAGGTGTCCCGTGG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGATGTCTGTATTCTGCTaGGGACCACATGTTCAGATA +
Preference number: 4 (lower is better)
Translates to: RAGAGQQLGPPWPCFPPLMSVFC*GPHVQI
Trigger: TATCTGAACATGTGGTCCGCAGCAGAATACAGACAT...CAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTATGCACACCTGGGATTTaGCCTCGATGTTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLCTPGI*PRCSQS
Trigger: GGATTGGGAACATCGAGGCCAAATCCCAGGTGTGCA...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCGCTGTGGCCCAGGTaGGTGCCCAGAAGGTTACGC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGALWPR*VPRRLR
Trigger: GCGTAACCTTCTGGGCACCCACCTGGGCCACAGCGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGCGCTGTGGCCCAGGTaGGTGCCCAGAAGGTTACGC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATALWPR*VPRRLR
Trigger: GCGTAACCTTCTGGGCACCCACCTGGGCCACAGCGC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAAGCTCCTCTCAGCAGTaGGGCATCTTCCATGTAGGA +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLSSSQQ*GIFHVG
Trigger: TCCTACATGGAAGATGCCCCACTGCTGAGAGGAGCT...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTTTGGAGCTGAAAGCATaGAGCAGAGGGCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFLELKA*SRGQKT
Trigger: TGTCTTCTGCCCTCTGCTCCATGCTTTCAGCTCCAA...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACTCCAGGAGCGGGATaGCCATGCTGGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLATPGAG*PCWLWQ
Trigger: CTGCCACAGCCAGCATGGCCATCCCGCTCCTGGAGT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAGATGGCAAACACGCTaGCATACTGCTCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFRWQTR*HTALQQ
Trigger: TTGCTGCAGAGCAGTATGCCAGCGTGTTTGCCATCT...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAGGAGGGGTTGGTGTATaGCAAGGAGATGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLGGVGV*QGDGKH
Trigger: GTGTTTGCCATCTCCTTGCCATACACCAACCCCTCC...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCACCTGCTGCCCAGCCTaGGACTCCAGTTTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: LVSAAYLPSSYHLLSMSTTCCPA*DSSLAG
Trigger: ACCGGCCAAACTGGAGTCCCAGGCTGGGCAGCAGGT...GGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCACCTGCTGCCCAGCCTaGGACTCCAGTTTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: VSAAYLPSSYHLLSMSTITCCPA*DSSLAG
Trigger: ACCGGCCAAACTGGAGTCCCAGGCTGGGCAGCAGGT...GATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACCTGCTGCCCAGCCTaGGACTCCAGTTTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLATCCPA*DSSLAG
Trigger: ACCGGCCAAACTGGAGTCCCAGGCTGGGCAGCAGGT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTGCCACCGCCGTCTGTaGTCCCAGAGAAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLACHRRL*SQRSRA
Trigger: GGCTCTGCTTCTCTGGGACCACAGACGGCGGTGGCA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTTACACCTTGTCTGGTTaGCAGTCCTTGAGCTCAATA +
Preference number: 4 (lower is better)
Translates to: GARQHADLLVSDLSKGRTYTLSG*QSLSSI
Trigger: TATTGAGCTCAAGGACTGCCAACCAGACAAGGTGTA...AGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CCTGCTTCTGTGGGCTCATCTGCAGCTCTAGCCTGGATTCTGCCCCAACCCCAAGGTGTGATGATCACATaGACAAAGTTGAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: PASVGSSAALAWILPQPQGVMIT*TKLNWP
Trigger: GGGCCAGTTCAACTTTGTCCATGTGATCATCACACC...TTGGGGTTGGGGCAGAATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGGAGGCAAGCTTGGGTTaGAATAGTGCACCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGEASLG*NSAPLH
Trigger: GTGAAGAGGTGCACTATTCCAACCCAAGCTTGCCTC...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGCATCAGAGGCAAGCTTaGGTTGGAATAGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGHQRQA*VGIVHL
Trigger: GAGGTGCACTATTCCAACCCAAGCTTGCCTCTGATG...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTATCCCAACAGTATCTTaGACTTCTCCTTCAAGCCGG +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFIPTVS*TSPSSR
Trigger: CCGGCTTGAAGGAGAAGTTCAAGATACTGTTGGGAT...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAGGTCCACCAGCAGCTaGGTAGCCAGCTTTCGGACC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLARSTSS*VASFRT
Trigger: GGTCCGAAAGCTGGCTACTCAGCTGCTGGTGGACCT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACGGGGGTGGAGAGAGTaGGCGCGCCATCACCTTTTC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATRGWRE*ARHHLF
Trigger: GAAAAGGTGATGGCGCGCTCACTCTCTCCACCCCCG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACGGGGGTGGAGAGAGTaGGCGCGCCATCACCTTTTC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGRGWRE*ARHHLF
Trigger: GAAAAGGTGATGGCGCGCTCACTCTCTCCACCCCCG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCTTGGTCTGAAGGATaGCCAGGAGCCCCAGGACCG +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLAWSEG*PGAPGP
Trigger: CGGTCCTGGGGCTCCTGGTCATCCTTCAGACCAAGC...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGCTTGGTCTGAAGGATaGCCAGGAGCCCCAGGACCG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATAWSEG*PGAPGP
Trigger: CGGTCCTGGGGCTCCTGGTCATCCTTCAGACCAAGC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAACTCCGGCAGCCTGCTaGGCACCAGCTTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGTPAAC*APASAP
Trigger: AGGTGCTGAAGCTGGTGCTCAGCAGGCTGCCGGAGT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAACTCCGGCAGCCTGCTaGGCACCAGCTTCAGCACCT +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATTPAAC*APASAP
Trigger: AGGTGCTGAAGCTGGTGCTCAGCAGGCTGCCGGAGT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCTCTTCACCCGTAGCTaGCCAGGTAGCTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLALFTRS*PGSCFP
Trigger: GGGGAAGCAGCTACCTGGTCAGCTACGGGTGAAGAG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGGTCAAGCAGCTGTACTaGCCGTTCAAAGGACTCATT +
Preference number: 4 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGVKQLY*PFKGLI
Trigger: AATGAGTCCTTTGAACGGTCAGTACAGCTGCTTGAC...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTGTCAAGCAGCTGTACTaGCCGTTCAAAGGACTCATT +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFVKQLY*PFKGLI
Trigger: AATGAGTCCTTTGAACGGTCAGTACAGCTGCTTGAC...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGTAGCCTCAGGGGCTTaGGCTGGGGCTTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGVASGA*AGALVW
Trigger: CCACACCAAAGCCCCAGCTCAAGCCCCTGAGGCTAC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGTAGCCTCAGGGGCTTaGGCTGGGGCTTTGGTGTGG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATVASGA*AGALVW
Trigger: CCACACCAAAGCCCCAGCTCAAGCCCCTGAGGCTAC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACATCCACGGAGGAAATaGGGCGCTTCCGCTGGCCTG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGHPRRK*GASAGL
Trigger: CAGGCCAGCGGAAGCGCCTCATTTCCTCCGTGGATG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTCCAGGGAGGCCGAGTaGATGGCCAGGTCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLASREAE*MARSLS
Trigger: AGAAAGGGACCTGGCCATGCACTCGGCCTCCCTGGA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTATTCCAGTCGCTCTCCTaGTTCAAACACTGCAACAGG +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLFQSLS*FKHCNR
Trigger: CCTGTTGCAGTGTTTGAAGCAGGAGAGCGACTGGAA...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAAACACGCTGGCATACTaGTCTGCAGCAAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLNTLAY*SAAKFL
Trigger: CAGGAACTTTGCTGCAGAGCAGTATGCCAGCGTGTT...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp CTCTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCAGAATCCGAGCCACCCTaGAGGTCCCCAGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: LLFLQHTCPLATICFLCPESEPP*RSPESR
Trigger: CCTGGACTCTGGGGACCTGCAGGGTGGCTCGGATTC...TGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAGAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGAATCCGAGCCACCCTaGAGGTCCCCAGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGESEPP*RSPESR
Trigger: CCTGGACTCTGGGGACCTGCAGGGTGGCTCGGATTC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTACAAAGGCACATAGGCTaGCAGATTCGTCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLQRHIG*QIRLLC
Trigger: GCAGAGAAGACGAATCTGGCAGCCTATGTGCCTTTG...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGGATGGCCAGCTCACTaGTGCTCTGGCCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAGWPAH*CSGLLP
Trigger: TGGGAGAAGGCCAGAGCAGCAGTGAGCTGGCCATCC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGATGTCTTTCCTGCACTaGAGGGTCAATAGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGMSFLH*RVNRLH
Trigger: GTGCAACCTATTGACCCTGCAGTGCAGGAAAGACAT...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTATGTCTTTCCTGCACTaGAGGGTCAATAGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFMSFLH*RVNRLH
Trigger: GTGCAACCTATTGACCCTGCAGTGCAGGAAAGACAT...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGTGTGGGCTGGAGGGTaGATCAGAGGCAAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAVWAGG*IRGKLG
Trigger: CCCAAGCTTGCCTCTGATGCACCCTCCAGCCCACAC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTATCCCATGTCACAGCCTaGAGCTCCTTCCTATACTTC +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLSHVTA*SSFLYF
Trigger: GAAGTATAGGAAGGAGCTCCAGGCTGTGACATGGGA...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCCATGGAACTCGTTCTaGTCACATAGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWPWNSF*SHSSST
Trigger: TGTGGAGGAGCTATGTGACCAGAACGAGTTCCATGG...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTACCATGGAACTCGTTCTaGTCACATAGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLPWNSF*SHSSST
Trigger: TGTGGAGGAGCTATGTGACCAGAACGAGTTCCATGG...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTACTTTCCTGCGAGCCATaGAACTCGTTCTGGTCACAT +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLLSCEP*NSFWSH
Trigger: ATGTGACCAGAACGAGTTCCATGGCTCGCAGGAAAG...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCGGATCCAGCCATCCTTaGCAGGGTGGATGGACTGGG +
Preference number: 4 (lower is better)
Translates to: LVSAAYLPSSYHLLSMSTGSSHP*QGGWTG
Trigger: CCCAGTCCATCCACCCTGCCAAGGATGGCTGGATCC...GGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGGGAGGCCGAGTGCATaGCCAGGTCCCTTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAGRPSA*PGPFLP
Trigger: TGGAAGAAAGGGACCTGGCCATGCACTCGGCCTCCC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCCTCGAGTGGCGTGGCTaGCAGGCAAGGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: VSAAYLPSSYHLLSMSTILEWRG*QARCRA
Trigger: AGCTCTACACCTTGCCTGCCAGCCACGCCACTCGAG...GATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCTCGAGTGGCGTGGCTaGCAGGCAAGGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLALEWRG*QARCRA
Trigger: AGCTCTACACCTTGCCTGCCAGCCACGCCACTCGAG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCGACCCCATCCTTGTTaGGCAGGCCCAGTCGATGCA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLARPHPC*AGPVDA
Trigger: TGCATCGACTGGGCCTGCCCAACAAGGATGGGGTCG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTCTCGAGAAGCCTTCTaGGGTACCTCGGAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLASREAF*GTSEPL
Trigger: GAGCGGCTCCGAGGTACCCCAGAAGGCTTCTCGAGA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CTCTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCAACTCCAGGAGCGGGATaGCCATGCTGGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: LLFLQHTCPLATICFLCPTPGAG*PCWLWQ
Trigger: CTGCCACAGCCAGCATGGCCATCCCGCTCCTGGAGT...TGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAACTCCAGGAGCGGGATaGCCATGCTGGCTGTGGCAG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATTPGAG*PCWLWQ
Trigger: CTGCCACAGCCAGCATGGCCATCCCGCTCCTGGAGT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CCCACAGGGGACCTCTTGGGGACTGCAGTGAAATTGGAGAACACATATCGGGCCAAGTTGTCATCAGCCTaGGCCATAGAGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: PTGDLLGTAVKLENTYRAKLSSA*AIEFSS
Trigger: GGATGAGAACTCTATGGCCCAGGCTGATGACAACTT...GGCCCGATATGTGTTCTCCAATTTCACTGCAGTCCCCAAGAGGTCCCCTGTGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227658.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAACCTGCTGCCCAGCCTaGGACTCCAGTTTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGTCCPA*DSSLAG
Trigger: ACCGGCCAAACTGGAGTCCCAGGCTGGGCAGCAGGT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAACCTGCTGCCCAGCCTaGGACTCCAGTTTGGCCGGT +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATTCCPA*DSSLAG
Trigger: ACCGGCCAAACTGGAGTCCCAGGCTGGGCAGCAGGT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGCCAACTCGAAGGCCATaGCCCCCTGACATGGAGCGG +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLPTRRP*PPDMER
Trigger: CCGCTCCATGTCAGGGGGCCATGGCCTTCGAGTTGG...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACCAACTCGAAGGCCATaGCCCCCTGACATGGAGCGG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATPTRRP*PPDMER
Trigger: CCGCTCCATGTCAGGGGGCCATGGCCTTCGAGTTGG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGTGCCACCGCCGTCTGTaGTCCCAGAGAAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLCHRRL*SQRSRA
Trigger: GGCTCTGCTTCTCTGGGACCACAGACGGCGGTGGCA...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACATGCCACCGCCGTCTGTaGTCCCAGAGAAGCAGAGCC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATCHRRL*SQRSRA
Trigger: GGCTCTGCTTCTCTGGGACCACAGACGGCGGTGGCA...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTCTGCTGTTGGAAGCTaGGCTCCTGCAGGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLASAVGS*APAGGF
Trigger: GAAGCCCCCTGCAGGAGCCCAGCTTCCAACAGCAGA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTGCAAGCTCCTCCAAATaGGACTTTTCTTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFASSSK*DFSSWL
Trigger: TAGCCAGGAAGAAAAGTCCCATTTGGAGGAGCTTGC...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp TCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTACTGTGGGATGAAAGATGCCAAAGGCTGTGAGGGTTaGAAGGAGAGGTCCACGGCA +
Preference number: 4 (lower is better)
Translates to: SAGFRSEQGQDYCGMKDAKGCEG*KERSTA
Trigger: TGCCGTGGACCTCTCCTTCCAACCCTCACAGCCTTT...GGCATCTTTCATCCCACAGTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGCACCTTCTCAGCACTaGAGGCCGCAGCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAAPSQH*RPQLCS
Trigger: AGAGCAGAGCTGCGGCCTCCAGTGCTGAGAAGGTGC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGTGGTGGGCATCAGGGTaGCAATGTGGAAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWWWASG*QCGKQL
Trigger: AAGCTGTTTTCCACATTGCCACCCTGATGCCCACCA...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTGGTGTGATGATCACATaGACAAAGTTGAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFGVMIT*TKLNWP
Trigger: GGGCCAGTTCAACTTTGTCCATGTGATCATCACACC...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCTTGAGCTGGGGCTTTaGTGTGGGCTGGAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLALELGL*CGLEGA
Trigger: TGCACCCTCCAGCCCACACCAAAGCCCCAGCTCAAG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCATGGACGATGGTCTTaGGTTCCGGGCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAHGRWS*VPGCPG
Trigger: ACCTGGACAGCCCGGAACTCAAGACCATCGTCCATG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAAGGTCCACCAGCAGCTaGGTAGCCAGCTTTCGGACC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGRSTSS*VASFRT
Trigger: GGTCCGAAAGCTGGCTACTCAGCTGCTGGTGGACCT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAGGTCCACCAGCAGCTaGGTAGCCAGCTTTCGGACC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATRSTSS*VASFRT
Trigger: GGTCCGAAAGCTGGCTACTCAGCTGCTGGTGGACCT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTGGTGCTCCGTGCTCTaGAACTGTCCTTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAWCSVL*NCPSQG
Trigger: CCCCTGAGAAGGACAGTTTCAGAGCACGGAGCACCA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACTCTTCACCCGTAGCTaGCCAGGTAGCTGCTTCCCC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGLFTRS*PGSCFP
Trigger: GGGGAAGCAGCTACCTGGTCAGCTACGGGTGAAGAG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAAATAAAGAAGCTGTCTGACTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCAGAGCCATGCTCATTTaGCAGGATGGCCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: QIKKLSDCCLCCSLNSTGRAMLI*QDGQLT
Trigger: AGTGAGCTGGCCATCCTGTCAAATGAGCATGGCTCT...GCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCATGCCAGCAGTAGGTaGACTGTCCATCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAHASSR*TVHPRH
Trigger: GTGGCGAGGATGGACAGTTCACCTACTGCTGGCATG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACATCCAGGGAGGCCGAGTaGATGGCCAGGTCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATSREAE*MARSLS
Trigger: AGAAAGGGACCTGGCCATGCACTCGGCCTCCCTGGA...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATCCAGGGAGGCCGAGTaGATGGCCAGGTCCCTTTCT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGSREAE*MARSLS
Trigger: AGAAAGGGACCTGGCCATGCACTCGGCCTCCCTGGA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCGGGCATCTCCACACTaGAGATGGCCAAGGCTACCA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLARASPH*RWPRLP
Trigger: TGGTAGCCTTGGCCATCTGCAGTGTGGAGATGCCCG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGGATGGCCAGCTCACTaGTGCTCTGGCCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLGWPAH*CSGLLP
Trigger: TGGGAGAAGGCCAGAGCAGCAGTGAGCTGGCCATCC...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGGATGGCCAGCTCACTaGTGCTCTGGCCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGGWPAH*CSGLLP
Trigger: TGGGAGAAGGCCAGAGCAGCAGTGAGCTGGCCATCC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGTGTGGGCTGGAGGGTaGATCAGAGGCAAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLVWAGG*IRGKLG
Trigger: CCCAAGCTTGCCTCTGATGCACCCTCCAGCCCACAC...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp GGAGAACACATATCGGGCCATCATGTCCAGACATGTTTCTGTGAGCTCCAAGTGCCGGAAGGCCTCGGCTaGACAGCTCTCTTTGAATTC +
Preference number: 4 (lower is better)
Translates to: GEHISGHHVQTCFCELQVPEGLG*TALFEF
Trigger: GAATTCAAAGAGAGCTGTGCAGCCGAGGCCTTCCGG...CACTTGGAGCTCACAGAAACATGTCTGGACATGATGGCCCGATATGTGTTCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227658.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCAGGAAACGCTCCTGTaGAGCTGTCCTTGGCAGCTG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAQETLL*SCPWQL
Trigger: CAGCTGCCAAGGACAGCTGCACAGGAGCGTTTCCTG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227745.2
CDS-3UTR CCA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAGGATCCAGCCATCCTTaGCAGGGTGGATGGACTGGG +
Preference number: 4 (lower is better)
Translates to: FLQHTCPLATICFLCPPSGSSHP*QGGWTG
Trigger: CCCAGTCCATCCACCCTGCCAAGGATGGCTGGATCC...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGGATCCAGCCATCCTTaGCAGGGTGGATGGACTGGG +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLGSSHP*QGGWTG
Trigger: CCCAGTCCATCCACCCTGCCAAGGATGGCTGGATCC...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATCCAGCCATCCTTaGCAGGGTGGATGGACTGGG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATGSSHP*QGGWTG
Trigger: CCCAGTCCATCCACCCTGCCAAGGATGGCTGGATCC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATTGAAGTGGTGGGTGTaGCACCCCTCTGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGLKWWV*HPSARS
Trigger: GGACCTGGCAGAGGGGTGCCACACCCACCACTTCAA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACATTGAAGTGGTGGGTGTaGCACCCCTCTGCCAGGTCC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATLKWWV*HPSARS
Trigger: GGACCTGGCAGAGGGGTGCCACACCCACCACTTCAA...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGGGAGGCCGAGTGCATaGCCAGGTCCCTTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGGRPSA*PGPFLP
Trigger: TGGAAGAAAGGGACCTGGCCATGCACTCGGCCTCCC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGGGAGGCCGAGTGCATaGCCAGGTCCCTTTCTTCCA +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLGRPSA*PGPFLP
Trigger: TGGAAGAAAGGGACCTGGCCATGCACTCGGCCTCCC...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGCTCGAGTGGCGTGGCTaGCAGGCAAGGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLLEWRG*QARCRA
Trigger: AGCTCTACACCTTGCCTGCCAGCCACGCCACTCGAG...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACTCGAGTGGCGTGGCTaGCAGGCAAGGTGTAGAGCT +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATLEWRG*QARCRA
Trigger: AGCTCTACACCTTGCCTGCCAGCCACGCCACTCGAG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CCTGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGCGACCCCATCCTTGTTaGGCAGGCCCAGTCGATGCA +
Preference number: 4 (lower is better)
Translates to: PGFCPNPKQTRQSQIKKLRPHPC*AGPVDA
Trigger: TGCATCGACTGGGCCTGCCCAACAAGGATGGGGTCG...CAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCACGACCCCATCCTTGTTaGGCAGGCCCAGTCGATGCA +
Preference number: 4 (lower is better)
Translates to: FLQHTCPLATICFLCPPSRPHPC*AGPVDA
Trigger: TGCATCGACTGGGCCTGCCCAACAAGGATGGGGTCG...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAGGGCAGAAGACAGCTaGTCGACACTGCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATRAEDS*STLQGE
Trigger: CTCCCCCTGCAGTGTCGACCAGCTGTCTTCTGCCCT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAAGGGCAGAAGACAGCTaGTCGACACTGCAGGGGGAG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGRAEDS*STLQGE
Trigger: CTCCCCCTGCAGTGTCGACCAGCTGTCTTCTGCCCT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACATCTCGAGAAGCCTTCTaGGGTACCTCGGAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATSREAF*GTSEPL
Trigger: GAGCGGCTCCGAGGTACCCCAGAAGGCTTCTCGAGA...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATCTCGAGAAGCCTTCTaGGGTACCTCGGAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGSREAF*GTSEPL
Trigger: GAGCGGCTCCGAGGTACCCCAGAAGGCTTCTCGAGA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGCGGGATGGCCATGCTaGCTGTGGCAGAAATGTGTG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAAGWPC*LWQKCV
Trigger: CACACATTTCTGCCACAGCCAGCATGGCCATCCCGC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCAACCAGCCAGGTTTTaGTCCTACCCCCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAQPARF*SYPLPG
Trigger: TCCTGGCAGGGGGTAGGACCAAAACCTGGCTGGTTG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGTCTGCTGTTGGAAGCTaGGCTCCTGCAGGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLSAVGS*APAGGF
Trigger: GAAGCCCCCTGCAGGAGCCCAGCTTCCAACAGCAGA...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATCTGCTGTTGGAAGCTaGGCTCCTGCAGGGGGCTTC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGSAVGS*APAGGF
Trigger: GAAGCCCCCTGCAGGAGCCCAGCTTCCAACAGCAGA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGGCAAGCTCCTCCAAATaGGACTTTTCTTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWASSSK*DFSSWL
Trigger: TAGCCAGGAAGAAAAGTCCCATTTGGAGGAGCTTGC...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGGGAGCGGGGAGAACTaGAAGGCAGAGGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLGSGEN*KAEDLQ
Trigger: CTGAAGGTCCTCTGCCTTCCAGTTCTCCCCGCTCCC...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGGGAGCGGGGAGAACTaGAAGGCAGAGGACCTTCAG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGGSGEN*KAEDLQ
Trigger: CTGAAGGTCCTCTGCCTTCCAGTTCTCCCCGCTCCC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGAGCGGAATCAGAGATaGTATAGCCTCGGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAERNQR*YSLGAG
Trigger: TCCGGCCCCGAGGCTATACCATCTCTGATTCCGCTC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CCTGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGGCACCTTCTCAGCACTaGAGGCCGCAGCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: PGFCPNPKQTRQSQIKKLAPSQH*RPQLCS
Trigger: AGAGCAGAGCTGCGGCCTCCAGTGCTGAGAAGGTGC...CAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGCACCTTCTCAGCACTaGAGGCCGCAGCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATAPSQH*RPQLCS
Trigger: AGAGCAGAGCTGCGGCCTCCAGTGCTGAGAAGGTGC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCACCTTCTCAGCACTaGAGGCCGCAGCTCTGCTCT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGAPSQH*RPQLCS
Trigger: AGAGCAGAGCTGCGGCCTCCAGTGCTGAGAAGGTGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAAATAAAGAAGCTGTCTGACTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCTGTCCACATCCTTGGTaGGCATCAGGGTGGCAATGT +
Preference number: 4 (lower is better)
Translates to: QIKKLSDCCLCCSLNSTGCPHPW*ASGWQC
Trigger: ACATTGCCACCCTGATGCCCACCAAGGATGTGGACA...GCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTATGGACAAAGTTGAACTaGCCCTTAATGGTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLWTKLN*PLMVPS
Trigger: ACTGGGCACCATTAAGGGCCAGTTCAACTTTGTCCA...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CAAATAAAGAAGCTGTCTGACTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCGGTCAGACACAATCTTaGCCACACTGGTGTCCACGA +
Preference number: 4 (lower is better)
Translates to: QIKKLSDCCLCCSLNSTGGQTQS*PHWCPR
Trigger: TCGTGGACACCAGTGTGGCCAAGATTGTGTCTGACC...GCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGCTTGAGCTGGGGCTTTaGTGTGGGCTGGAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLLELGL*CGLEGA
Trigger: TGCACCCTCCAGCCCACACCAAAGCCCCAGCTCAAG...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACTTGAGCTGGGGCTTTaGTGTGGGCTGGAGGGTGCA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATLELGL*CGLEGA
Trigger: TGCACCCTCCAGCCCACACCAAAGCCCCAGCTCAAG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGGGTTGGATCGGCTGTaGTGTACCTGTGAGGCCATC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAGLDRL*CTCEAI
Trigger: GATGGCCTCACAGGTACACCACAGCCGATCCAACCC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227804.2
CDS-3UTR TCA 90 bp GGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTAATCATGTGAACCATTaGTGCAATGTATTCGTCAAG +
Preference number: 4 (lower is better)
Translates to: GARQHADLLVSDLSKGRTNHVNH*CNVFVK
Trigger: CTTGACGAATACATTGCATCAATGGTTCACATGATT...AGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCATGTGGGGGAGTTCTTaGGAGAGTAGAGCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAMWGSS*ESRAGE
Trigger: CTCACCGGCTCTACTCTCTCAAGAACTCCCCCACAT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CTCTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACATGGACGATGGTCTTaGGTTCCGGGCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: LLFLQHTCPLATICFLCPHGRWS*VPGCPG
Trigger: ACCTGGACAGCCCGGAACTCAAGACCATCGTCCATG...TGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACATGGACGATGGTCTTaGGTTCCGGGCTGTCCAGGT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGHGRWS*VPGCPG
Trigger: ACCTGGACAGCCCGGAACTCAAGACCATCGTCCATG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp TCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTACTGTGGGATGAAAGATGCCTGCGGCACTCATTCCTaGAGAACCTCTCCATCAACA +
Preference number: 4 (lower is better)
Translates to: SAGFRSEQGQDYCGMKDACGTHS*RTSPST
Trigger: TGTTGATGGAGAGGTTCTTCAGGAATGAGTGCCGCA...GGCATCTTTCATCCCACAGTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CCTGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGGCCAGCTTTCGGACCTaGTGGTCCTTATCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: PGFCPNPKQTRQSQIKKLASFRT*WSLSSG
Trigger: TCCCGAGGATAAGGACCATCAGGTCCGAAAGCTGGC...CAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGCCAGCTTTCGGACCTaGTGGTCCTTATCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATASFRT*WSLSSG
Trigger: TCCCGAGGATAAGGACCATCAGGTCCGAAAGCTGGC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCCAGCTTTCGGACCTaGTGGTCCTTATCCTCGGGA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGASFRT*WSLSSG
Trigger: TCCCGAGGATAAGGACCATCAGGTCCGAAAGCTGGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATGGTGCTCCGTGCTCTaGAACTGTCCTTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGWCSVL*NCPSQG
Trigger: CCCCTGAGAAGGACAGTTTCAGAGCACGGAGCACCA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACATGGTGCTCCGTGCTCTaGAACTGTCCTTCTCAGGGG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATWCSVL*NCPSQG
Trigger: CCCCTGAGAAGGACAGTTTCAGAGCACGGAGCACCA...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCACTTGTTGTCACAGTaGCAAGCTTGTTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWHLLSQ*QACFQP
Trigger: TGGTTGGAAACAAGCTTGTCACTGTGACAACAAGTG...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCCATGTTGTTGATGTCTaGGGAGAAGGGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: LVSAAYLPSSYHLLSMSTHVVDV*GEGAER
Trigger: CCGCTCAGCCCCTTCTCCTCAGACATCAACAACATG...GGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCTTGCTCAAAGGCTGTaGGGGTTGGAAGGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLALAQRL*GLEGEV
Trigger: GACCTCTCCTTCCAACCCTCACAGCCTTTGAGCAAG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACATGCCAGCAGTAGGTaGACTGTCCATCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATHASSR*TVHPRH
Trigger: GTGGCGAGGATGGACAGTTCACCTACTGCTGGCATG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACATGCCAGCAGTAGGTaGACTGTCCATCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGHASSR*TVHPRH
Trigger: GTGGCGAGGATGGACAGTTCACCTACTGCTGGCATG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGAGGCCATCTGGAGGTaGCAGAGCAGGATGGTGACA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGEAIWR*QSRMVT
Trigger: TGTCACCATCCTGCTCTGTCACCTCCAGATGGCCTC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227804.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCTGTGGTGTACCTGTaGGGCCATCTGGAGGTGACA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGAVVYL*GHLEVT
Trigger: TGTCACCTCCAGATGGCCTCACAGGTACACCACAGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227804.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACTCAAGGACCATGGCTaGGTCTGCCCAGGAAACGCT +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATLKDHG*VCPGNA
Trigger: AGCGTTTCCTGGGCAGACTCAGCCATGGTCCTTGAG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227745.2
CDS-3UTR GCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGCGGGCATCTCCACACTaGAGATGGCCAAGGCTACCA +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLRASPH*RWPRLP
Trigger: TGGTAGCCTTGGCCATCTGCAGTGTGGAGATGCCCG...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACGGGCATCTCCACACTaGAGATGGCCAAGGCTACCA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATRASPH*RWPRLP
Trigger: TGGTAGCCTTGGCCATCTGCAGTGTGGAGATGCCCG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGGAGCGGGATGGCCATaGTGGCTGTGGCAGAAATGT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGGAGWP*WLWQKC
Trigger: ACATTTCTGCCACAGCCAGCATGGCCATCCCGCTCC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAATAATGGATGGCCAGCTCACTaGTGCTCTGGCCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: AAYLPSSYHLLSMSTINNGWPAH*CSGLLP
Trigger: TGGGAGAAGGCCAGAGCAGCAGTGAGCTGGCCATCC...ATTATTGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp TGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGTCGTGTGGGCTGGAGGGTaGATCAGAGGCAAGCTTGGG +
Preference number: 4 (lower is better)
Translates to: WILPQPQTDKTKSNKEAVVWAGG*IRGKLG
Trigger: CCCAAGCTTGCCTCTGATGCACCCTCCAGCCCACAC...GACAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCCGGAAGGCCTCGGCTaGACAGCTCTCTTTGAATTC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAPEGLG*TALFEF
Trigger: GAATTCAAAGAGAGCTGTGCAGCCGAGGCCTTCCGG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000226284.2
ENSMUST00000227745.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCCTTGGCAGGGTGGATaGACTGGGCTCTGTAGGATA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAPWQGG*TGLCRI
Trigger: TATCCTACAGAGCCCAGTCCATCCACCCTGCCAAGG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAGACTGTTGAAGTGGTaGGTGTGGCACCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATRLLKW*VWHPSA
Trigger: GGCAGAGGGGTGCCACACCCACCACTTCAACAGTCT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAAGACTGTTGAAGTGGTaGGTGTGGCACCCCTCTGCC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGRLLKW*VWHPSA
Trigger: GGCAGAGGGGTGCCACACCCACCACTTCAACAGTCT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp TGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGTCTCTCGAGAAGCCTTCTaGGGTACCTCGGAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: WILPQPQTDKTKSNKEAVSREAF*GTSEPL
Trigger: GAGCGGCTCCGAGGTACCCCAGAAGGCTTCTCGAGA...GACAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAGCGGGATGGCCATGCTaGCTGTGGCAGAAATGTGTG +
Preference number: 4 (lower is better)
Translates to: FLQHTCPLATICFLCPPSAGWPC*LWQKCV
Trigger: CACACATTTCTGCCACAGCCAGCATGGCCATCCCGC...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGCGGGATGGCCATGCTaGCTGTGGCAGAAATGTGTG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATAGWPC*LWQKCV
Trigger: CACACATTTCTGCCACAGCCAGCATGGCCATCCCGC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTTCTGTGAGCTCCAAGTaGAGATTCTTCAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFSVSSK*RFFKLS
Trigger: TGACAACTTGAAGAATCTCCACTTGGAGCTCACAGA...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCACAACCAGCCAGGTTTTaGTCCTACCCCCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: FLQHTCPLATICFLCPPSQPARF*SYPLPG
Trigger: TCCTGGCAGGGGGTAGGACCAAAACCTGGCTGGTTG...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACAACCAGCCAGGTTTTaGTCCTACCCCCTGCCAGGA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATQPARF*SYPLPG
Trigger: TCCTGGCAGGGGGTAGGACCAAAACCTGGCTGGTTG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CCTGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGCGTCTTCTCTGCTGTTaGAAGCTGGGCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: PGFCPNPKQTRQSQIKKLRLLCC*KLGSCR
Trigger: CCTGCAGGAGCCCAGCTTCCAACAGCAGAGAAGACG...CAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGCGTCTTCTCTGCTGTTaGAAGCTGGGCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLRLLCC*KLGSCR
Trigger: CCTGCAGGAGCCCAGCTTCCAACAGCAGAGAAGACG...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACGTCTTCTCTGCTGTTaGAAGCTGGGCTCCTGCAGG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGRLLCC*KLGSCR
Trigger: CCTGCAGGAGCCCAGCTTCCAACAGCAGAGAAGACG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCACCTGAGTCTCTCCTaGACTTCCCTCCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAHLSLS*TSLLKD
Trigger: GTCCTTGAGGAGGGAAGTCCAGGAGAGACTCAGGTG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAAAGGCTGTGAGGGTTaGAAGGAGAGGTCCACGGCA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAKGCEG*KERSTA
Trigger: TGCCGTGGACCTCTCCTTCCAACCCTCACAGCCTTT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGAGCGGAATCAGAGATaGTATAGCCTCGGGGCCGGA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATERNQR*YSLGAG
Trigger: TCCGGCCCCGAGGCTATACCATCTCTGATTCCGCTC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGCTAGGGTTGATGCCTaGCACCTTCTCAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAARVDA*HLLSTG
Trigger: TCCAGTGCTGAGAAGGTGCCAGGCATCAACCCTAGC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAGCTCACTGCTGCTCTaGCCTTCTCCCACATACAGG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLASSLLL*PSPTYR
Trigger: CCTGTATGTGGGAGAAGGCCAGAGCAGCAGTGAGCT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGCTTGTCCACATCCTTaGTGGGCATCAGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAACPHP*WASGWQ
Trigger: TTGCCACCCTGATGCCCACCAAGGATGTGGACAAGC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCAATCTTGGCCACACTaGTGTCCACGAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAQSWPH*CPRGLP
Trigger: TGGAAGGCCTCGTGGACACCAGTGTGGCCAAGATTG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGGGTTGGATCGGCTGTaGTGTACCTGTGAGGCCATA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAGLDRL*CTCEAI
Trigger: TATGGCCTCACAGGTACACCACAGCCGATCCAACCC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGGAATTCTTTCACAGGTaGAGAGTTATTCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGEFFHR*RVIQAL
Trigger: CAAGGCCTGAATAACTCTCCACCTGTGAAAGAATTC...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAATGTGGGGGAGTTCTTaGGAGAGTAGAGCCGGTGAG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATMWGSS*ESRAGE
Trigger: CTCACCGGCTCTACTCTCTCAAGAACTCCCCCACAT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAAGGGTCTTTGGAGCTaGAAGCATGGAGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATKGLWS*KHGAEG
Trigger: GCCCTCTGCTCCATGCTTTCAGCTCCAAAGACCCTT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAAAGGGTCTTTGGAGCTaGAAGCATGGAGCAGAGGGC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGKGLWS*KHGAEG
Trigger: GCCCTCTGCTCCATGCTTTCAGCTCCAAAGACCCTT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCTGGGGAATAGGGAGCTaGAGTATCCAGGACACCAAC +
Preference number: 4 (lower is better)
Translates to: VSAAYLPSSYHLLSMSTIWGIGS*SIQDTN
Trigger: GTTGGTGTCCTGGATACTTCAGCTCCCTATTCCCCA...GATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTGGGGAATAGGGAGCTaGAGTATCCAGGACACCAAC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAWGIGS*SIQDTN
Trigger: GTTGGTGTCCTGGATACTTCAGCTCCCTATTCCCCA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACATGTTGTTGATGTCTaGGGAGAAGGGGCTGAGCGG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATHVVDV*GEGAER
Trigger: CCGCTCAGCCCCTTCTCCTCAGACATCAACAACATG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACTTGCTCAAAGGCTGTaGGGGTTGGAAGGAGAGGTC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGLAQRL*GLEGEV
Trigger: GACCTCTCCTTCCAACCCTCACAGCCTTTGAGCAAG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAGAGCCATGCTCATTTaGCAGGATGGCCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLARAMLI*QDGQLT
Trigger: AGTGAGCTGGCCATCCTGTCAAATGAGCATGGCTCT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGCTGTGGTGTACCTGTaGGGCCATATTTGCATGCAG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAAVVYL*GHICMQ
Trigger: CTGCATGCAAATATGGCCTCACAGGTACACCACAGC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACATGTTCAGATACACTaGTGCTGCGGCACCGGAAGG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGHVQIH*CCGTGR
Trigger: CCTTCCGGTGCCGCAGCATCAGTGTATCTGAACATG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226284.2
ENSMUST00000227745.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGACAGCCTTCCAAAGTaGCTCCACTGCATGCTCCTC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGDSLPK*LHCMLL
Trigger: GAGGAGCATGCAGTGGAGGCACTTTGGAAGGCTGTC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGACAGCCTTCCAAAGTaGCTCCACTGCATGCTCCTC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATDSLPK*LHCMLL
Trigger: GAGGAGCATGCAGTGGAGGCACTTTGGAAGGCTGTC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGGAATGTGGGAGAGCTaGGAGATGACCACCGAGTTA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAGMWES*EMTTEL
Trigger: TAACTCGGTGGTCATCTCGCAGCTCTCCCACATTCC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp TTTGTATGTCAGTATTTTCTACTTGGGCTGAAAATGGGTCCATTGTTACCCAGGGAATCCGAGCCACCCTaGAGGTCCCCAGAGTCCAGG +
Preference number: 4 (lower is better)
Translates to: FVCQYFLLGLKMGPLLPRESEPP*RSPESR
Trigger: CCTGGACTCTGGGGACCTGCAGGGTGGCTCGGATTC...CCTGGGTAACAATGGACCCATTTTCAGCCCAAGTAGAAAATACTGACATACAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAATGGGGATACCCCCTaGAGCAAGCTCCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLANGDTP*SKLLQM
Trigger: CATTTGGAGGAGCTTGCTGCAGGGGGTATCCCCATT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAATGTGGAAAACAGCTTaGATGATGTCATCATGCCAG +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLMWKTA*MMSSCQ
Trigger: CTGGCATGATGACATCATGCAAGCTGTTTTCCACAT...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp CTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCGCAGGGTCAATAGGTTaGACTTGTAGTCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: LVSAAYLPSSYHLLSMSTAGSIG*TCSPAV
Trigger: CACCGCTGGACTACAAGTGCAACCTATTGACCCTGC...GGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGCAGGGTCAATAGGTTaGACTTGTAGTCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAAGSIG*TCSPAV
Trigger: CACCGCTGGACTACAAGTGCAACCTATTGACCCTGC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTGCACACCTGGGATTTaGCCTCGATGTTCCCAATCC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLACTPGI*PRCSQS
Trigger: GGATTGGGAACATCGAGGCCAAATCCCAGGTGTGCA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTGCCTTCTGCACACCTaGGATTTGGCCTCGATGTTC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLACLLHT*DLASMF
Trigger: GAACATCGAGGCCAAATCCCAGGTGTGCAGAAGGCA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAGCTCCTCTCAGCAGTaGGGCATCTTCCATGTAGGA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLASSSQQ*GIFHVG
Trigger: TCCTACATGGAAGATGCCCCACTGCTGAGAGGAGCT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACCTTGGCAGGGTGGATaGACTGGGCTCTGTAGGATA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGPWQGG*TGLCRI
Trigger: TATCCTACAGAGCCCAGTCCATCCACCCTGCCAAGG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CCTGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGGTGAAAGGGGCCCACTaGCTTTCTTCTCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: PGFCPNPKQTRQSQIKKLVKGAH*LSSLRL
Trigger: GAGCCTCAGAGAAGAAAGCCAGTGGGCCCCTTTCAC...CAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGTGAAAGGGGCCCACTaGCTTTCTTCTCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATVKGAH*LSSLRL
Trigger: GAGCCTCAGAGAAGAAAGCCAGTGGGCCCCTTTCAC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGTGAAAGGGGCCCACTaGCTTTCTTCTCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGVKGAH*LSSLRL
Trigger: GAGCCTCAGAGAAGAAAGCCAGTGGGCCCCTTTCAC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTATCTGTGAGCTCCAAGTaGAGATTCTTCAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLSVSSK*RFFKLS
Trigger: TGACAACTTGAAGAATCTCCACTTGGAGCTCACAGA...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACCTGGGACTCCAGTTTaGCCGGTGCTTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATPGTPV*PVLPLS
Trigger: AGACAAAGGAAGCACCGGCCAAACTGGAGTCCCAGG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACCTGGGACTCCAGTTTaGCCGGTGCTTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGPGTPV*PVLPLS
Trigger: AGACAAAGGAAGCACCGGCCAAACTGGAGTCCCAGG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAAGCTCATCAGCCAGCTaGTGTTTCCTGTGGGTCTGC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGSSSAS*CFLWVC
Trigger: GCAGACCCACAGGAAACACCAGCTGGCTGATGAGCT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACACCTGAGTCTCTCCTaGACTTCCCTCCTCAAGGAC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATHLSLS*TSLLKD
Trigger: GTCCTTGAGGAGGGAAGTCCAGGAGAGACTCAGGTG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAAAGGCTGTGAGGGTTaGAAGGAGAGGTCCACGGCA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATKGCEG*KERSTA
Trigger: TGCCGTGGACCTCTCCTTCCAACCCTCACAGCCTTT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAAAAGGCTGTGAGGGTTaGAAGGAGAGGTCCACGGCA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGKGCEG*KERSTA
Trigger: TGCCGTGGACCTCTCCTTCCAACCCTCACAGCCTTT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCTAGGGTTGATGCCTaGCACCTTCTCAGCACTGGA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGARVDA*HLLSTG
Trigger: TCCAGTGCTGAGAAGGTGCCAGGCATCAACCCTAGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAGCTCACTGCTGCTCTaGCCTTCTCCCACATACAGG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATSSLLL*PSPTYR
Trigger: CCTGTATGTGGGAGAAGGCCAGAGCAGCAGTGAGCT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTGTCCACATCCTTGGTaGGCATCAGGGTGGCAATGT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLACPHPW*ASGWQC
Trigger: ACATTGCCACCCTGATGCCCACCAAGGATGTGGACA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGCTTGTCCACATCCTTaGTGGGCATCAGGGTGGCAA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATACPHP*WASGWQ
Trigger: TTGCCACCCTGATGCCCACCAAGGATGTGGACAAGC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACAATCTTGGCCACACTaGTGTCCACGAGGCCTTCCA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGQSWPH*CPRGLP
Trigger: TGGAAGGCCTCGTGGACACCAGTGTGGCCAAGATTG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGGTCAGACACAATCTTaGCCACACTGGTGTCCACGA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAGQTQS*PHWCPR
Trigger: TCGTGGACACCAGTGTGGCCAAGATTGTGTCTGACC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CTCTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCAGGGTTGGATCGGCTGTaGTGTACCTGTGAGGCCATA +
Preference number: 4 (lower is better)
Translates to: LLFLQHTCPLATICFLCPGLDRL*CTCEAI
Trigger: TATGGCCTCACAGGTACACCACAGCCGATCCAACCC...TGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGGTTGGATCGGCTGTaGTGTACCTGTGAGGCCATA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATGLDRL*CTCEAI
Trigger: TATGGCCTCACAGGTACACCACAGCCGATCCAACCC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACCTCCTCAAGGACCATaGCTGAGTCTGCCCAGGAAA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATPPQGP*LSLPRK
Trigger: TTTCCTGGGCAGACTCAGCCATGGTCCTTGAGGAGG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227745.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCATAGAACTGCCTGTTaGTCAGCAGCACGAAGGACA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAHRTAC*SAARRT
Trigger: TGTCCTTCGTGCTGCTGATCAACAGGCAGTTCTATG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCATGGCTATGACGTGGTaGGCCAGACACACAATGTAC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAMAMTW*ARHTMY
Trigger: GTACATTGTGTGTCTGGCTCACCACGTCATAGCCAT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp TCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTACTGTGGGATGAAAGATGCCCACTTGTTGTCACAGTaGCAAGCTTGTTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: SAGFRSEQGQDYCGMKDAHLLSQ*QACFQP
Trigger: TGGTTGGAAACAAGCTTGTCACTGTGACAACAAGTG...GGCATCTTTCATCCCACAGTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CCTGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGTGGGGAATAGGGAGCTaGAGTATCCAGGACACCAAC +
Preference number: 4 (lower is better)
Translates to: PGFCPNPKQTRQSQIKKLWGIGS*SIQDTN
Trigger: GTTGGTGTCCTGGATACTTCAGCTCCCTATTCCCCA...CAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACATGGGGAATAGGGAGCTaGAGTATCCAGGACACCAAC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATWGIGS*SIQDTN
Trigger: GTTGGTGTCCTGGATACTTCAGCTCCCTATTCCCCA...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAAGAGCCATGCTCATTTaGCAGGATGGCCAGCTCACT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGRAMLI*QDGQLT
Trigger: AGTGAGCTGGCCATCCTGTCAAATGAGCATGGCTCT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAGCTGTGGTGTACCTGTaGGGCCATATTTGCATGCAG +
Preference number: 4 (lower is better)
Translates to: FLQHTCPLATICFLCPPSAVVYL*GHICMQ
Trigger: CTGCATGCAAATATGGCCTCACAGGTACACCACAGC...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGCTGTGGTGTACCTGTaGGGCCATATTTGCATGCAG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATAVVYL*GHICMQ
Trigger: CTGCATGCAAATATGGCCTCACAGGTACACCACAGC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCTGTGGTGTACCTGTaGGGCCATATTTGCATGCAG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGAVVYL*GHICMQ
Trigger: CTGCATGCAAATATGGCCTCACAGGTACACCACAGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GGAGAACACATATCGGGCCATCATGTCCAGACATGTTTCTGTGAGCTCCAAGTGCTGCACAGCTCTCTTTaGATTCTTTCACAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: GEHISGHHVQTCFCELQVLHSSL*ILSQVE
Trigger: CTCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAG...CACTTGGAGCTCACAGAAACATGTCTGGACATGATGGCCCGATATGTGTTCTCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227658.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAGTCTGTTTGCCTTCTaGACACCTGGGATTTGGCCT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLASLFAF*TPGIWP
Trigger: AGGCCAAATCCCAGGTGTGCAGAAGGCAAACAGACT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCCAACATCCATCCACTaGAGGACAAACTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAPTSIH*RTNSAS
Trigger: ACTGGCAGAGTTTGTCCTGCAGTGGATGGATGTTGG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCACAGCATCCAGCACTTaGAAGGACACCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: VSAAYLPSSYHLLSMSTITASST*KDTSMS
Trigger: GGACATTGAGGTGTCCTTGCAAGTGCTGGATGCTGT...GATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGGAATGTGGGAGAGCTaGGAGATGACCACCGAGTTA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGGMWES*EMTTEL
Trigger: TAACTCGGTGGTCATCTCGCAGCTCTCCCACATTCC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTCCTGCTTCAAACACTaGAACAGGACACGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLASCFKH*NRTRKS
Trigger: GCTCTTCCGTGTCCTGTTGCAGTGTTTGAAGCAGGA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCTTCCAGTCGCTCTCCTaGTTCAAACACTGCAACAGG +
Preference number: 4 (lower is better)
Translates to: VSAAYLPSSYHLLSMSTIFQSLS*FKHCNR
Trigger: CCTGTTGCAGTGTTTGAAGCAGGAGAGCGACTGGAA...GATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTTCCAGTCGCTCTCCTaGTTCAAACACTGCAACAGG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAFQSLS*FKHCNR
Trigger: CCTGTTGCAGTGTTTGAAGCAGGAGAGCGACTGGAA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAACACGCTGGCATACTaGTCTGCAGCAAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLANTLAY*SAAKFL
Trigger: CAGGAACTTTGCTGCAGAGCAGTATGCCAGCGTGTT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCGGACCTCTTGGGGACTaGAGTGAAATTGGAGAACAC +
Preference number: 4 (lower is better)
Translates to: LVSAAYLPSSYHLLSMSTGPLGD*SEIGEH
Trigger: GTGTTCTCCAATTTCACTGCAGTCCCCAAGAGGTCC...GGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGGACCTCTTGGGGACTaGAGTGAAATTGGAGAACAC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAGPLGD*SEIGEH
Trigger: GTGTTCTCCAATTTCACTGCAGTCCCCAAGAGGTCC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGCATTGGACAGCTCTTaGAGGGGCATGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAALDSS*RGMLLM
Trigger: CATCAACAACATGCCCCTGCAAGAGCTGTCCAATGC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAATGGGGATACCCCCTaGAGCAAGCTCCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATNGDTP*SKLLQM
Trigger: CATTTGGAGGAGCTTGCTGCAGGGGGTATCCCCATT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGCAGGGTCAATAGGTTaGACTTGTAGTCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATAGSIG*TCSPAV
Trigger: CACCGCTGGACTACAAGTGCAACCTATTGACCCTGC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCAGGGTCAATAGGTTaGACTTGTAGTCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGAGSIG*TCSPAV
Trigger: CACCGCTGGACTACAAGTGCAACCTATTGACCCTGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCCATCTTTCCTGCACTaGAGGGTCAATAGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAPSFLH*RVNRLH
Trigger: GTGCAACCTATTGACCCTGCAGTGCAGGAAAGATGG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227804.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACAGGGCCATCTTTCCTaGACTGCAGGGTCAATAGGT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGQGHLS*TAGSIG
Trigger: ACCTATTGACCCTGCAGTGCAGGAAAGATGGCCCTG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227804.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGCCACCACTCACATTTaGATGCAGGGCCATCTTTCC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATATTHI*MQGHLS
Trigger: GGAAAGATGGCCCTGCATGCAAATGTGAGTGGTGGC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227804.2
CDS-3UTR CCA 90 bp CTCTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCATGCCTTCTGCACACCTaGGATTTGGCCTCGATGTTC +
Preference number: 4 (lower is better)
Translates to: LLFLQHTCPLATICFLCPCLLHT*DLASMF
Trigger: GAACATCGAGGCCAAATCCCAGGTGTGCAGAAGGCA...TGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAGCTCCTCTCAGCAGTaGGGCATCTTCCATGTAGGA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATSSSQQ*GIFHVG
Trigger: TCCTACATGGAAGATGCCCCACTGCTGAGAGGAGCT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCTCCCATGTCACAGCCTaGAGCTCCTTCCTATACTTC +
Preference number: 4 (lower is better)
Translates to: LVSAAYLPSSYHLLSMSTSHVTA*SSFLYF
Trigger: GAAGTATAGGAAGGAGCTCCAGGCTGTGACATGGGA...GGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTCCCATGTCACAGCCTaGAGCTCCTTCCTATACTTC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLASHVTA*SSFLYF
Trigger: GAAGTATAGGAAGGAGCTCCAGGCTGTGACATGGGA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCCATGGAACTCGTTCTaGTCACATAGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAPWNSF*SHSSST
Trigger: TGTGGAGGAGCTATGTGACCAGAACGAGTTCCATGG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCTTTCCTGCGAGCCATaGAACTCGTTCTGGTCACAT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLALSCEP*NSFWSH
Trigger: ATGTGACCAGAACGAGTTCCATGGCTCGCAGGAAAG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAATAATGTGAAAGGGGCCCACTaGCTTTCTTCTCTGAGGCTC +
Preference number: 4 (lower is better)
Translates to: AAYLPSSYHLLSMSTINNVKGAH*LSSLRL
Trigger: GAGCCTCAGAGAAGAAAGCCAGTGGGCCCCTTTCAC...ATTATTGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTTGGAGCTGAAAGCATaGAGCAGAGGGCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLALELKA*SRGQKT
Trigger: TGTCTTCTGCCCTCTGCTCCATGCTTTCAGCTCCAA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp TTTGTATGTCAGTATTTTCTACTTGGGCTGAAAATGGGTCCATTGTTACCCAGGTCTCGAGAAGCCTTCTaGGGTACCTCGGAGCCGCTC +
Preference number: 4 (lower is better)
Translates to: FVCQYFLLGLKMGPLLPRSREAF*GTSEPL
Trigger: GAGCGGCTCCGAGGTACCCCAGAAGGCTTCTCGAGA...CCTGGGTAACAATGGACCCATTTTCAGCCCAAGTAGAAAATACTGACATACAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAGATGGCAAACACGCTaGCATACTGCTCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLARWQTR*HTALQQ
Trigger: TTGCTGCAGAGCAGTATGCCAGCGTGTTTGCCATCT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGGAGGGGTTGGTGTATaGCAAGGAGATGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLGGVGV*QGDGKH
Trigger: GTGTTTGCCATCTCCTTGCCATACACCAACCCCTCC...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGGGGTTGGTGTATaGCAAGGAGATGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATGGVGV*QGDGKH
Trigger: GTGTTTGCCATCTCCTTGCCATACACCAACCCCTCC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGGAGGGGTTGGTGTATaGCAAGGAGATGGCAAACAC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGGGVGV*QGDGKH
Trigger: GTGTTTGCCATCTCCTTGCCATACACCAACCCCTCC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp TGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGTCCCTGGGACTCCAGTTTaGCCGGTGCTTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: WILPQPQTDKTKSNKEAVPGTPV*PVLPLS
Trigger: AGACAAAGGAAGCACCGGCCAAACTGGAGTCCCAGG...GACAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTGGTGGGCATCAGGGTaGCAATGTGGAAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAWWASG*QCGKQL
Trigger: AAGCTGTTTTCCACATTGCCACCCTGATGCCCACCA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATGTCCACATCCTTGGTaGGCATCAGGGTGGCAATGT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGCPHPW*ASGWQC
Trigger: ACATTGCCACCCTGATGCCCACCAAGGATGTGGACA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGGTCAGACACAATCTTaGCCACACTGGTGTCCACGA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGGQTQS*PHWCPR
Trigger: TCGTGGACACCAGTGTGGCCAAGATTGTGTCTGACC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGAGGCAAGCTTGGGTTaGAATAGTGCACCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAEASLG*NSAPLH
Trigger: GTGAAGAGGTGCACTATTCCAACCCAAGCTTGCCTC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCCATCAGAGGCAAGCTTaGGTTGGAATAGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: LVSAAYLPSSYHLLSMSTHQRQA*VGIVHL
Trigger: GAGGTGCACTATTCCAACCCAAGCTTGCCTCTGATG...GGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCATCAGAGGCAAGCTTaGGTTGGAATAGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAHQRQA*VGIVHL
Trigger: GAGGTGCACTATTCCAACCCAAGCTTGCCTCTGATG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GAACACATATCGGGCCATCATGTCCAGACATGTTTCTGTGAGCTCCAAGTGGAGCTTGTTTGGGGGCTCTaGCTATCCTCAAACTTTTGG +
Preference number: 4 (lower is better)
Translates to: EHISGHHVQTCFCELQVELVWGL*LSSNFW
Trigger: CCAAAAGTTTGAGGATAGCCAGAGCCCCCAAACAAG...CTCCACTTGGAGCTCACAGAAACATGTCTGGACATGATGGCCCGATATGTGTTC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000227658.2
CDS-3UTR CCA 90 bp CTCTCCCACAGGGGACCTCTTGGGGACTGCAGTGAAATTGGAGAACACATATCGGAATTCTTTCACAGGTaGAGAGTTATTCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: LSHRGPLGDCSEIGEHISEFFHR*RVIQAL
Trigger: CAAGGCCTGAATAACTCTCCACCTGTGAAAGAATTC...CGATATGTGTTCTCCAATTTCACTGCAGTCCCCAAGAGGTCCCCTGTGGGAGAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227658.2
CDS-3UTR TCA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAAATCATGTGAACCATTaGTGCAATGTATTCGTCAAG +
Preference number: 4 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLNHVNH*CNVFVK
Trigger: CTTGACGAATACATTGCATCAATGGTTCACATGATT...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAAGGATCTGTCCTCCATaGTGCGGCACATGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGRICPP*CGTCCR
Trigger: TCTACAACATGTGCCGCATCATGGAGGACAGATCCT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGAGGATCTGTCCTCCATaGTGCGGCACATGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLRICPP*CGTCCR
Trigger: TCTACAACATGTGCCGCATCATGGAGGACAGATCCT...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAGGATCTGTCCTCCATaGTGCGGCACATGTTGTAGA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATRICPP*CGTCCR
Trigger: TCTACAACATGTGCCGCATCATGGAGGACAGATCCT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGTGCGGCACTCATTCCTaGAGAACCTCTCCATCAACA +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLCGTHS*RTSPST
Trigger: TGTTGATGGAGAGGTTCTTCAGGAATGAGTGCCGCA...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACATGCGGCACTCATTCCTaGAGAACCTCTCCATCAACA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATCGTHS*RTSPST
Trigger: TGTTGATGGAGAGGTTCTTCAGGAATGAGTGCCGCA...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CCTGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGCATAGAACTGCCTGTTaGTCAGCAGCACGAAGGACA +
Preference number: 4 (lower is better)
Translates to: PGFCPNPKQTRQSQIKKLHRTAC*SAARRT
Trigger: TGTCCTTCGTGCTGCTGATCAACAGGCAGTTCTATG...CAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACATAGAACTGCCTGTTaGTCAGCAGCACGAAGGACA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGHRTAC*SAARRT
Trigger: TGTCCTTCGTGCTGCTGATCAACAGGCAGTTCTATG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACATAGAACTGCCTGTTaGTCAGCAGCACGAAGGACA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATHRTAC*SAARRT
Trigger: TGTCCTTCGTGCTGCTGATCAACAGGCAGTTCTATG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACTGGCTTTCTTCTCTaGGGCTCTATCCAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLATGFLL*GSIQFH
Trigger: ATGGAACTGGATAGAGCCTCAGAGAAGAAAGCCAGT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAATGGCTATGACGTGGTaGGCCAGACACACAATGTAC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGMAMTW*ARHTMY
Trigger: GTACATTGTGTGTCTGGCTCACCACGTCATAGCCAT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGATGGCTATGACGTGGTaGGCCAGACACACAATGTAC +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLMAMTW*ARHTMY
Trigger: GTACATTGTGTGTCTGGCTCACCACGTCATAGCCAT...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAATGGCTATGACGTGGTaGGCCAGACACACAATGTAC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATMAMTW*ARHTMY
Trigger: GTACATTGTGTGTCTGGCTCACCACGTCATAGCCAT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGTCAAGCAGCTGTACTaGCCGTTCAAAGGACTCATT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAVKQLY*PFKGLI
Trigger: AATGAGTCCTTTGAACGGTCAGTACAGCTGCTTGAC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp TTTGTATGTCAGTATTTTCTACTTGGGCTGAAAATGGGTCCATTGTTACCCAGGCATGCCAGCAGTAGGTaGACTGTCCATCCTCGCCAC +
Preference number: 4 (lower is better)
Translates to: FVCQYFLLGLKMGPLLPRHASSR*TVHPRH
Trigger: GTGGCGAGGATGGACAGTTCACCTACTGCTGGCATG...CCTGGGTAACAATGGACCCATTTTCAGCCCAAGTAGAAAATACTGACATACAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCGGAAAACAGCTTGCATaGTGTCATCATGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: LVSAAYLPSSYHLLSMSTGKQLA*CHHASS
Trigger: ACTGCTGGCATGATGACATCATGCAAGCTGTTTTCC...GGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAAGTCTGTTTGCCTTCTaGACACCTGGGATTTGGCCT +
Preference number: 4 (lower is better)
Translates to: FLQHTCPLATICFLCPPSSLFAF*TPGIWP
Trigger: AGGCCAAATCCCAGGTGTGCAGAAGGCAAACAGACT...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGAGTCTGTTTGCCTTCTaGACACCTGGGATTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLSLFAF*TPGIWP
Trigger: AGGCCAAATCCCAGGTGTGCAGAAGGCAAACAGACT...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAGTCTGTTTGCCTTCTaGACACCTGGGATTTGGCCT +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATSLFAF*TPGIWP
Trigger: AGGCCAAATCCCAGGTGTGCAGAAGGCAAACAGACT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CTCTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCAACATCCATCCACTaGAGGACAAACTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: LLFLQHTCPLATICFLCPPTSIH*RTNSAS
Trigger: ACTGGCAGAGTTTGTCCTGCAGTGGATGGATGTTGG...TGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACCAACATCCATCCACTaGAGGACAAACTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATPTSIH*RTNSAS
Trigger: ACTGGCAGAGTTTGTCCTGCAGTGGATGGATGTTGG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACCAACATCCATCCACTaGAGGACAAACTCTGCCAGT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGPTSIH*RTNSAS
Trigger: ACTGGCAGAGTTTGTCCTGCAGTGGATGGATGTTGG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAACAGCATCCAGCACTTaGAAGGACACCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATTASST*KDTSMS
Trigger: GGACATTGAGGTGTCCTTGCAAGTGCTGGATGCTGT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAACAGCATCCAGCACTTaGAAGGACACCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGTASST*KDTSMS
Trigger: GGACATTGAGGTGTCCTTGCAAGTGCTGGATGCTGT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATCCTGCTTCAAACACTaGAACAGGACACGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGSCFKH*NRTRKS
Trigger: GCTCTTCCGTGTCCTGTTGCAGTGTTTGAAGCAGGA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACATCCTGCTTCAAACACTaGAACAGGACACGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATSCFKH*NRTRKS
Trigger: GCTCTTCCGTGTCCTGTTGCAGTGTTTGAAGCAGGA...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCATTCCAGTCGCTCTCCTaGTTCAAACACTGCAACAGG +
Preference number: 4 (lower is better)
Translates to: FLQHTCPLATICFLCPPSFQSLS*FKHCNR
Trigger: CCTGTTGCAGTGTTTGAAGCAGGAGAGCGACTGGAA...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCTGGCATACTGCTCTaGAGCAAAGTTCCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLAGILL*SKVPVE
Trigger: CTCTACAGGAACTTTGCTGCAGAGCAGTATGCCAGC...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCTGGCATACTGCTCTaGAGCAAAGTTCCTGTAGAG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGAGILL*SKVPVE
Trigger: CTCTACAGGAACTTTGCTGCAGAGCAGTATGCCAGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAACACGCTGGCATACTaGTCTGCAGCAAAGTTCCTG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATNTLAY*SAAKFL
Trigger: CAGGAACTTTGCTGCAGAGCAGTATGCCAGCGTGTT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGGACCTCTTGGGGACTaGAGTGAAATTGGAGAACAC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGGPLGD*SEIGEH
Trigger: GTGTTCTCCAATTTCACTGCAGTCCCCAAGAGGTCC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGCAAAGGCACATAGGCTaGCAGATTCGTCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLQRHIG*QIRLLC
Trigger: GCAGAGAAGACGAATCTGGCAGCCTATGTGCCTTTG...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACAAAGGCACATAGGCTaGCAGATTCGTCTTCTCTGC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATQRHIG*QIRLLC
Trigger: GCAGAGAAGACGAATCTGGCAGCCTATGTGCCTTTG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAGCATTGGACAGCTCTTaGAGGGGCATGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: FLQHTCPLATICFLCPPSALDSS*RGMLLM
Trigger: CATCAACAACATGCCCCTGCAAGAGCTGTCCAATGC...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCATTGGACAGCTCTTaGAGGGGCATGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLALDSS*RGMLLM
Trigger: CATCAACAACATGCCCCTGCAAGAGCTGTCCAATGC...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCATTGGACAGCTCTTaGAGGGGCATGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGALDSS*RGMLLM
Trigger: CATCAACAACATGCCCCTGCAAGAGCTGTCCAATGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAATAATAATGGGGATACCCCCTaGAGCAAGCTCCTCCAAATG +
Preference number: 4 (lower is better)
Translates to: AAYLPSSYHLLSMSTINNNGDTP*SKLLQM
Trigger: CATTTGGAGGAGCTTGCTGCAGGGGGTATCCCCATT...ATTATTGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp GCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAATAATGCAGGGTCAATAGGTTaGACTTGTAGTCCAGCGGTG +
Preference number: 4 (lower is better)
Translates to: AAYLPSSYHLLSMSTINNAGSIG*TCSPAV
Trigger: CACCGCTGGACTACAAGTGCAACCTATTGACCCTGC...ATTATTGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCATGTCTTTCCTGCACTaGAGGGTCAATAGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAMSFLH*RVNRLH
Trigger: GTGCAACCTATTGACCCTGCAGTGCAGGAAAGACAT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACCACTCACATTTGCATaGAGGGCCATCTTTCCTGCA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATPLTFA*RAIFPA
Trigger: TGCAGGAAAGATGGCCCTGCATGCAAATGTGAGTGG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227804.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACTTCTAGCCTTTCATaGAGGTCTTCATTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLATSSLS*RSSLEG
Trigger: CCCCTCCAATGAAGACCTCCATGAAAGGCTAGAAGT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CCTGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGCCATGGAACTCGTTCTaGTCACATAGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: PGFCPNPKQTRQSQIKKLPWNSF*SHSSST
Trigger: TGTGGAGGAGCTATGTGACCAGAACGAGTTCCATGG...CAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACCATGGAACTCGTTCTaGTCACATAGCTCCTCCACA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGPWNSF*SHSSST
Trigger: TGTGGAGGAGCTATGTGACCAGAACGAGTTCCATGG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACTTTCCTGCGAGCCATaGAACTCGTTCTGGTCACAT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGLSCEP*NSFWSH
Trigger: ATGTGACCAGAACGAGTTCCATGGCTCGCAGGAAAG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAACAACTGCAAGTTCTaGATCCAGCCATCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLANNCKF*IQPSLA
Trigger: TGCCAAGGATGGCTGGATCCAGAACTTGCAGTTGTT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATTGGAGCTGAAAGCATaGAGCAGAGGGCAGAAGACA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGLELKA*SRGQKT
Trigger: TGTCTTCTGCCCTCTGCTCCATGCTTTCAGCTCCAA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAGATGGCAAACACGCTaGCATACTGCTCTGCAGCAA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATRWQTR*HTALQQ
Trigger: TTGCTGCAGAGCAGTATGCCAGCGTGTTTGCCATCT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAAGTTGTCATCAGCCTaGGCCATAGAGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAKLSSA*AIEFSS
Trigger: GGATGAGAACTCTATGGCCCAGGCTGATGACAACTT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATGGTGGGCATCAGGGTaGCAATGTGGAAAACAGCTT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGWWASG*QCGKQL
Trigger: AAGCTGTTTTCCACATTGCCACCCTGATGCCCACCA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTGGACAAAGTTGAACTaGCCCTTAATGGTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAWTKLN*PLMVPS
Trigger: ACTGGGCACCATTAAGGGCCAGTTCAACTTTGTCCA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGGTGTGATGATCACATaGACAAAGTTGAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAGVMIT*TKLNWP
Trigger: GGGCCAGTTCAACTTTGTCCATGTGATCATCACACC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGAGGCAAGCTTGGGTTaGAATAGTGCACCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGEASLG*NSAPLH
Trigger: GTGAAGAGGTGCACTATTCCAACCCAAGCTTGCCTC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGAGGCAAGCTTGGGTTaGAATAGTGCACCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATEASLG*NSAPLH
Trigger: GTGAAGAGGTGCACTATTCCAACCCAAGCTTGCCTC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACATCAGAGGCAAGCTTaGGTTGGAATAGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGHQRQA*VGIVHL
Trigger: GAGGTGCACTATTCCAACCCAAGCTTGCCTCTGATG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACATCAGAGGCAAGCTTaGGTTGGAATAGTGCACCTC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATHQRQA*VGIVHL
Trigger: GAGGTGCACTATTCCAACCCAAGCTTGCCTCTGATG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGATCCCAACAGTATCTTaGACTTCTCCTTCAAGCCGG +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLIPTVS*TSPSSR
Trigger: CCGGCTTGAAGGAGAAGTTCAAGATACTGTTGGGAT...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAATCCCAACAGTATCTTaGACTTCTCCTTCAAGCCGG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGIPTVS*TSPSSR
Trigger: CCGGCTTGAAGGAGAAGTTCAAGATACTGTTGGGAT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAACTGGCTTTCTTCTCTaGGGCTCTATCCAGTTCCAT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGTGFLL*GSIQFH
Trigger: ATGGAACTGGATAGAGCCTCAGAGAAGAAAGCCAGT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGACAAGACAAAGTCAAATAAAGAAGCTGTCTGACTGCTGTCTGTGCTGCTCTATGGCTATGACGTGGTaGGCCAGACACACAATGTAC +
Preference number: 4 (lower is better)
Translates to: QTRQSQIKKLSDCCLCCSMAMTW*ARHTMY
Trigger: GTACATTGTGTGTCTGGCTCACCACGTCATAGCCAT...AGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTGACTTTGTCTTGTCTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCACTTGTTGTCACAGTaGCAAGCTTGTTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAHLLSQ*QACFQP
Trigger: TGGTTGGAAACAAGCTTGTCACTGTGACAACAAGTG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAAAACAGCTTGCATaGTGTCATCATGCCAGCAGT +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATGKQLA*CHHASS
Trigger: ACTGCTGGCATGATGACATCATGCAAGCTGTTTTCC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCACTGCACAGCTCTCTTTaGATTCTTTCACAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: FLQHTCPLATICFLCPPSLHSSL*ILSQVE
Trigger: CTCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAG...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACTGCACAGCTCTCTTTaGATTCTTTCACAGGTGGAG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGLHSSL*ILSQVE
Trigger: CTCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226284.2
ENSMUST00000227745.2
CDS-3UTR GCA 90 bp GCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAATAATACAGCATCCAGCACTTaGAAGGACACCTCAATGTCC +
Preference number: 4 (lower is better)
Translates to: AAYLPSSYHLLSMSTINNTASST*KDTSMS
Trigger: GGACATTGAGGTGTCCTTGCAAGTGCTGGATGCTGT...ATTATTGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACTCTCCATCAACAACTaGAAGTTCTGGATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATLSINN*KFWIQP
Trigger: TGGCTGGATCCAGAACTTGCAGTTGTTGATGGAGAG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGCTCTCCATCAACAACTaGAAGTTCTGGATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLLSINN*KFWIQP
Trigger: TGGCTGGATCCAGAACTTGCAGTTGTTGATGGAGAG...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACTCTCCATCAACAACTaGAAGTTCTGGATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGLSINN*KFWIQP
Trigger: TGGCTGGATCCAGAACTTGCAGTTGTTGATGGAGAG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAATAATTCCTGCTTCAAACACTaGAACAGGACACGGAAGAGC +
Preference number: 4 (lower is better)
Translates to: AAYLPSSYHLLSMSTINNSCFKH*NRTRKS
Trigger: GCTCTTCCGTGTCCTGTTGCAGTGTTTGAAGCAGGA...ATTATTGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CAGACAAGACAAAGTCAAATAAAGAAGCTGTCTGACTGCTGTCTGTGCTGCTCTGCATTGGACAGCTCTTaGAGGGGCATGTTGTTGATG +
Preference number: 4 (lower is better)
Translates to: QTRQSQIKKLSDCCLCCSALDSS*RGMLLM
Trigger: CATCAACAACATGCCCCTGCAAGAGCTGTCCAATGC...AGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTGACTTTGTCTTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAATGTCTTTCCTGCACTaGAGGGTCAATAGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGMSFLH*RVNRLH
Trigger: GTGCAACCTATTGACCCTGCAGTGCAGGAAAGACAT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAATGTCTTTCCTGCACTaGAGGGTCAATAGGTTGCAC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATMSFLH*RVNRLH
Trigger: GTGCAACCTATTGACCCTGCAGTGCAGGAAAGACAT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CTCTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCAACTTCTAGCCTTTCATaGAGGTCTTCATTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: LLFLQHTCPLATICFLCPTSSLS*RSSLEG
Trigger: CCCCTCCAATGAAGACCTCCATGAAAGGCTAGAAGT...TGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAACTTCTAGCCTTTCATaGAGGTCTTCATTGGAGGGG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGTSSLS*RSSLEG
Trigger: CCCCTCCAATGAAGACCTCCATGAAAGGCTAGAAGT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAATAATCTTTCCTGCGAGCCATaGAACTCGTTCTGGTCACAT +
Preference number: 4 (lower is better)
Translates to: AAYLPSSYHLLSMSTINNLSCEP*NSFWSH
Trigger: ATGTGACCAGAACGAGTTCCATGGCTCGCAGGAAAG...ATTATTGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAAACAACTGCAAGTTCTaGATCCAGCCATCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGNNCKF*IQPSLA
Trigger: TGCCAAGGATGGCTGGATCCAGAACTTGCAGTTGTT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGAAGTTGTCATCAGCCTaGGCCATAGAGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLKLSSA*AIEFSS
Trigger: GGATGAGAACTCTATGGCCCAGGCTGATGACAACTT...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp TTTGTATGTCAGTATTTTCTACTTGGGCTGAAAATGGGTCCATTGTTACCCAGGCCTGGGACTCCAGTTTaGCCGGTGCTTCCTTTGTCT +
Preference number: 4 (lower is better)
Translates to: FVCQYFLLGLKMGPLLPRPGTPV*PVLPLS
Trigger: AGACAAAGGAAGCACCGGCCAAACTGGAGTCCCAGG...CCTGGGTAACAATGGACCCATTTTCAGCCCAAGTAGAAAATACTGACATACAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCAAGCTCCTCCAAATaGGACTTTTCTTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLASSSK*DFSSWL
Trigger: TAGCCAGGAAGAAAAGTCCCATTTGGAGGAGCTTGC...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGCAAGCTCCTCCAAATaGGACTTTTCTTCCTGGCTA +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATASSSK*DFSSWL
Trigger: TAGCCAGGAAGAAAAGTCCCATTTGGAGGAGCTTGC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTACACCTTGTCTGGTTaGCAGTCCTTGAGCTCAATA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAYTLSG*QSLSSI
Trigger: TATTGAGCTCAAGGACTGCCAACCAGACAAGGTGTA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATGGACAAAGTTGAACTaGCCCTTAATGGTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGWTKLN*PLMVPS
Trigger: ACTGGGCACCATTAAGGGCCAGTTCAACTTTGTCCA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CCTGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGTGGACAAAGTTGAACTaGCCCTTAATGGTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: PGFCPNPKQTRQSQIKKLWTKLN*PLMVPS
Trigger: ACTGGGCACCATTAAGGGCCAGTTCAACTTTGTCCA...CAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACATGGACAAAGTTGAACTaGCCCTTAATGGTGCCCAGT +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATWTKLN*PLMVPS
Trigger: ACTGGGCACCATTAAGGGCCAGTTCAACTTTGTCCA...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGTGTGATGATCACATaGACAAAGTTGAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATGVMIT*TKLNWP
Trigger: GGGCCAGTTCAACTTTGTCCATGTGATCATCACACC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGGTGTGATGATCACATaGACAAAGTTGAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGGVMIT*TKLNWP
Trigger: GGGCCAGTTCAACTTTGTCCATGTGATCATCACACC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCACTTGTTTGGGGGCTCTaGCTATCCTCAAACTTTTGG +
Preference number: 4 (lower is better)
Translates to: FLQHTCPLATICFLCPPSLVWGL*LSSNFW
Trigger: CCAAAAGTTTGAGGATAGCCAGAGCCCCCAAACAAG...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACTTGTTTGGGGGCTCTaGCTATCCTCAAACTTTTGG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATLVWGL*LSSNFW
Trigger: CCAAAAGTTTGAGGATAGCCAGAGCCCCCAAACAAG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000226284.2
ENSMUST00000227745.2
CDS-3UTR TCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGTACCAGAAGGAATTCTaGGGACAAGCCAACATCCAT +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLYQKEF*GQANIH
Trigger: ATGGATGTTGGCTTGTCCTCAGAATTCCTTCTGGTA...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR TCA 90 bp CAAATAAAGAAGCTGTCTGACTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCAATCATGTGAACCATTaGTGCAATGTATTCGTCAAG +
Preference number: 4 (lower is better)
Translates to: QIKKLSDCCLCCSLNSTGNHVNH*CNVFVK
Trigger: CTTGACGAATACATTGCATCAATGGTTCACATGATT...GCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACACTTGTTGTCACAGTaGCAAGCTTGTTTCCAACCA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGHLLSQ*QACFQP
Trigger: TGGTTGGAAACAAGCTTGTCACTGTGACAACAAGTG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR TCA 90 bp CAGACAAGACAAAGTCAAATAAAGAAGCTGTCTGACTGCTGTCTGTGCTGCTCTGTCAAGCAGCTGTACTaGCCGTTCAAAGGACTCATT +
Preference number: 4 (lower is better)
Translates to: QTRQSQIKKLSDCCLCCSVKQLY*PFKGLI
Trigger: AATGAGTCCTTTGAACGGTCAGTACAGCTGCTTGAC...AGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTGACTTTGTCTTGTCTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp TGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGTCCTCTCCATCAACAACTaGAAGTTCTGGATCCAGCCA +
Preference number: 4 (lower is better)
Translates to: WILPQPQTDKTKSNKEAVLSINN*KFWIQP
Trigger: TGGCTGGATCCAGAACTTGCAGTTGTTGATGGAGAG...GACAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR GCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCATGTGGAAAACAGCTTaGATGATGTCATCATGCCAG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAMWKTA*MMSSCQ
Trigger: CTGGCATGATGACATCATGCAAGCTGTTTTCCACAT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAATAATAAGTTGTCATCAGCCTaGGCCATAGAGTTCTCATCC +
Preference number: 4 (lower is better)
Translates to: AAYLPSSYHLLSMSTINNKLSSA*AIEFSS
Trigger: GGATGAGAACTCTATGGCCCAGGCTGATGACAACTT...ATTATTGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTCTGTGAGCTCCAAGTaGAGATTCTTCAAGTTGTCA +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLASVSSK*RFFKLS
Trigger: TGACAACTTGAAGAATCTCCACTTGGAGCTCACAGA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGTACACCTTGTCTGGTTaGCAGTCCTTGAGCTCAATA +
Preference number: 4 (lower is better)
Translates to: VRVQFISCRSTVRIATWLYTLSG*QSLSSI
Trigger: TATTGAGCTCAAGGACTGCCAACCAGACAAGGTGTA...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATACACCTTGTCTGGTTaGCAGTCCTTGAGCTCAATA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGYTLSG*QSLSSI
Trigger: TATTGAGCTCAAGGACTGCCAACCAGACAAGGTGTA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CCA 90 bp TTTGTATGTCAGTATTTTCTACTTGGGCTGAAAATGGGTCCATTGTTACCCAGGGGTCAGACACAATCTTaGCCACACTGGTGTCCACGA +
Preference number: 4 (lower is better)
Translates to: FVCQYFLLGLKMGPLLPRGQTQS*PHWCPR
Trigger: TCGTGGACACCAGTGTGGCCAAGATTGTGTCTGACC...CCTGGGTAACAATGGACCCATTTTCAGCCCAAGTAGAAAATACTGACATACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGAATTCTTTCACAGGTaGAGAGTTATTCAGGCCTTG +
Preference number: 4 (lower is better)
Translates to: RVQFISCRSTVRIATWLAEFFHR*RVIQAL
Trigger: CAAGGCCTGAATAACTCTCCACCTGTGAAAGAATTC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226284.2
ENSMUST00000227745.2
CDS-3UTR GCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAATGTGGAAAACAGCTTaGATGATGTCATCATGCCAG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATMWKTA*MMSSCQ
Trigger: CTGGCATGATGACATCATGCAAGCTGTTTTCCACAT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAATGTGGAAAACAGCTTaGATGATGTCATCATGCCAG +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGMWKTA*MMSSCQ
Trigger: CTGGCATGATGACATCATGCAAGCTGTTTTCCACAT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR GCA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAATGTCTGTATTCTGCTaGGGACCACATGTTCAGATA +
Preference number: 4 (lower is better)
Translates to: QFISCRSTVRIATWLATGMSVFC*GPHVQI
Trigger: TATCTGAACATGTGGTCCGCAGCAGAATACAGACAT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226284.2
ENSMUST00000227745.2
CDS-3UTR CCA 90 bp TTTGTATGTCAGTATTTTCTACTTGGGCTGAAAATGGGTCCATTGTTACCCAGGGAGGCAAGCTTGGGTTaGAATAGTGCACCTCTTCAC +
Preference number: 4 (lower is better)
Translates to: FVCQYFLLGLKMGPLLPREASLG*NSAPLH
Trigger: GTGAAGAGGTGCACTATTCCAACCCAAGCTTGCCTC...CCTGGGTAACAATGGACCCATTTTCAGCCCAAGTAGAAAATACTGACATACAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CCA 90 bp TTTGTATGTCAGTATTTTCTACTTGGGCTGAAAATGGGTCCATTGTTACCCAGGGGTGTGATGATCACATaGACAAAGTTGAACTGGCCC +
Preference number: 4 (lower is better)
Translates to: FVCQYFLLGLKMGPLLPRGVMIT*TKLNWP
Trigger: GGGCCAGTTCAACTTTGTCCATGTGATCATCACACC...CCTGGGTAACAATGGACCCATTTTCAGCCCAAGTAGAAAATACTGACATACAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR TCA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAATCATGTGAACCATTaGTGCAATGTATTCGTCAAG +
Preference number: 4 (lower is better)
Translates to: VQFISCRSTVRIATWLATNHVNH*CNVFVK
Trigger: CTTGACGAATACATTGCATCAATGGTTCACATGATT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 90 bp CCTGACATGGAGCGGACCCGGTCCCGGGCCCCACGGGACACCTGCTaGCCAGCCTGGGACTCCAGTTTGGCCGGTGCTTCCTTTGTCTGC +
Preference number: 5 (lower is better)
Translates to: PDMERTRSRAPRDTC*PAWDSSLAGASFVC
Trigger: GCAGACAAAGGAAGCACCGGCCAAACTGGAGTCCCAGGCTGGGCAGCAGGTGTCCCGTGGGGCCCGGGACCGGGTCCGCTCCATGTCAGG
69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 90 bp GAGCGGACCCGGTCCCGGGCCCCACGGGACACCTGCTGCCCAGCCTaGGACTCCAGTTTGGCCGGTGCTTCCTTTGTCTGCCTCACATGT +
Preference number: 5 (lower is better)
Translates to: ERTRSRAPRDTCCPA*DSSLAGASFVCLTC
Trigger: ACATGTGAGGCAGACAAAGGAAGCACCGGCCAAACTGGAGTCCCAGGCTGGGCAGCAGGTGTCCCGTGGGGCCCGGGACCGGGTCCGCTC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 90 bp AGGAGCCCCAGGACCGCGGTCTTCACGTCCTCCAGGGAGGCCGAGTaGATGGCCAGGTCCCTTTCTTCCAGCTCCGGGGGTGGAGAGAGT +
Preference number: 5 (lower is better)
Translates to: RSPRTAVFTSSREAE*MARSLSSSSGGGES
Trigger: ACTCTCTCCACCCCCGGAGCTGGAAGAAAGGGACCTGGCCATGCACTCGGCCTCCCTGGAGGACGTGAAGACCGCGGTCCTGGGGCTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 90 bp TGCTGTTGGAAGCTGGGCTCCTGCAGGGGGCTTCTCGGGCTTCGCTaGCACCGCCGTCTGTGGTCCCAGAGAAGCAGAGCCACCTGGGGA +
Preference number: 5 (lower is better)
Translates to: CCWKLGSCRGLLGLR*HRRLWSQRSRATWG
Trigger: TCCCCAGGTGGCTCTGCTTCTCTGGGACCACAGACGGCGGTGGCAGCGAAGCCCGAGAAGCCCCCTGCAGGAGCCCAGCTTCCAACAGCA
67% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCAGAACATCCAACACCTaGATGCGCACGGCGCTGCGG +
Preference number: 5 (lower is better)
Translates to: LASGRCWTAIGATVALFSRTSNT*MRTALR
Trigger: CCGCAGCGCCGTGCGCATCAAGGTGTTGGATGTTCT...GGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp AAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGGGACGACCCCATCCTTGTaGGGCAGGCCCAGTCGATGC +
Preference number: 5 (lower is better)
Translates to: KKLLDKPTNGACPHGGWGTTPSL*GRPSRC
Trigger: GCATCGACTGGGCCTGCCCAACAAGGATGGGGTCGT...CCCCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTT
63% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGGCCAGGCAGCACGCAGATCTGCTCACGACCCCATCCTaGTTGGGCAGGCCCAGTCGA +
Preference number: 5 (lower is better)
Translates to: PPWPCFPPLSGARQHADLLTTPS*LGRPSR
Trigger: TCGACTGGGCCTGCCCAACAAGGATGGGGTCGTGAG...CAGATCTGCGTGCTGCCTGGCCCCAGACAAGGGAGGAAAACAAGGCCACGGTGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGAGGACAGGAAGCGCCTaGATGATGATGTCGGGCATC +
Preference number: 5 (lower is better)
Translates to: PSLASGRCWTAIGATVALRTGSA*MMMSGI
Trigger: GATGCCCGACATCATCATCAAGGCGCTTCCTGTCCT...CAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGCCAACCAGCCAGGTTTaGGTCCTACCCCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: PRSYWTSPPMGLAPMAGGPTSQV*VLPPAR
Trigger: CCTGGCAGGGGGTAGGACCAAAACCTGGCTGGTTGG...CCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGG
63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS CCA 90 bp CCGCTGGCCTGTTTCATAGGTGGGTGTAGCCTCAGGGGCTTGAGCTaGGGCTTTGGTGTGGGCTGGAGGGTGCATCAGAGGCAAGCTTGG +
Preference number: 5 (lower is better)
Translates to: PLACFIGGCSLRGLS*GFGVGWRVHQRQAW
Trigger: CCAAGCTTGCCTCTGATGCACCCTCCAGCCCACACCAAAGCCCCAGCTCAAGCCCCTGAGGCTACACCCACCTATGAAACAGGCCAGCGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAGGGAGAGTAGGAGGCTaGGCGGTGCCAGCCGCTGGC +
Preference number: 5 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLGRVGG*AVPAAG
Trigger: GCCAGCGGCTGGCACCGCCAAGCCTCCTACTCTCCC...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp AAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGGGTGTAGCCTCAGGGGCTaGAGCTGGGGCTTTGGTGTG +
Preference number: 5 (lower is better)
Translates to: KKLLDKPTNGACPHGGWGCSLRG*SWGFGV
Trigger: CACACCAAAGCCCCAGCTCAAGCCCCTGAGGCTACA...CCCCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 22 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS GCA 90 bp GGGCTGAATCTCACGACCCCATCCTTGTTGGGCAGGCCCAGTCGATaGAGCGAGTCAGCCCGCAGTAGCAGCAGGAAGTCAAAGGCCTGT +
Preference number: 5 (lower is better)
Translates to: GLNLTTPSLLGRPSR*SESARSSSRKSKAC
Trigger: ACAGGCCTTTGACTTCCTGCTGCTACTGCGGGCTGACTCGCTGCATCGACTGGGCCTGCCCAACAAGGATGGGGTCGTGAGATTCAGCCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 90 bp GGTGGGTGTAGCCTCAGGGGCTTGAGCTGGGGCTTTGGTGTGGGCTaGAGGGTGCATCAGAGGCAAGCTTGGGTTGGAATAGTGCACCTC +
Preference number: 5 (lower is better)
Translates to: GGCSLRGLSWGFGVG*RVHQRQAWVGIVHL
Trigger: GAGGTGCACTATTCCAACCCAAGCTTGCCTCTGATGCACCCTCCAGCCCACACCAAAGCCCCAGCTCAAGCCCCTGAGGCTACACCCACC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp AAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGGGTCATGGACGATGGTCTaGAGTTCCGGGCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: KKLLDKPTNGACPHGGWGSWTMV*SSGLSR
Trigger: CCTGGACAGCCCGGAACTCAAGACCATCGTCCATGA...CCCCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTT
61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS TCA 90 bp CGGTGCTTCCTTTGTCTGCCTCACATGTGTGCTAGGATCAGAGCTTaGATCCGAGCCACCCTGCAGGTCCCCAGAGTCCAGGCCCAGCAG +
Preference number: 5 (lower is better)
Translates to: RCFLCLPHMCARIRA*IRATLQVPRVQAQQ
Trigger: CTGCTGGGCCTGGACTCTGGGGACCTGCAGGGTGGCTCGGATTCAAGCTCTGATCCTAGCACACATGTGAGGCAGACAAAGGAAGCACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 90 bp AGCTCCATCACAACAGGGAGCGCCCACACGACTATCTCCCCAGGCTaGCGCCACCACTCACATTTGCATGCAGGGCCATCTTTCCTGCAC +
Preference number: 5 (lower is better)
Translates to: SSITTGSAHTTISPG*RHHSHLHAGPSFLH
Trigger: GTGCAGGAAAGATGGCCCTGCATGCAAATGTGAGTGGTGGCGGCAGCCTGGGGAGATAGTCGTGTGGGCGCTCCCTGTTGTGATGGAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227804.2
CDS GCA 90 bp CCCTCCTCAAGGACCATGGCTGAGTCTGCCCAGGAAACGCTCCTGTaGAGCTGTCCTTGGCAGCTGGGCTGGTACAGGGAGGAGAAAGAA +
Preference number: 5 (lower is better)
Translates to: PSSRTMAESAQETLL*SCPWQLGWYREEKE
Trigger: TTCTTTCTCCTCCCTGTACCAGCCCAGCTGCCAAGGACAGCTGCACAGGAGCGTTTCCTGGGCAGACTCAGCCATGGTCCTTGAGGAGGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227745.2
CDS CCA 90 bp TGCAACTCCGGAGAAGAGCTAGACTTGCTCAAAGGCTGTGAGGGTTaGAAGGAGAGGTCCACGGCAGGCCGAGCCCCCTCAGAGGAGATG +
Preference number: 5 (lower is better)
Translates to: CNSGEELDLLKGCEG*KERSTAGRAPSEEM
Trigger: CATCTCCTCTGAGGGGGCTCGGCCTGCCGTGGACCTCTCCTTCCAACCCTCACAGCCTTTGAGCAAGTCTAGCTCTTCTCCGGAGTTGCA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 90 bp AGCTGGGGCTTTGGTGTGGGCTGGAGGGTGCATCAGAGGCAAGCTTaGGTTGGAATAGTGCACCTCTTCACGGATCCTCTGGCGGAGACG +
Preference number: 5 (lower is better)
Translates to: SWGFGVGWRVHQRQA*VGIVHLFTDPLAET
Trigger: CGTCTCCGCCAGAGGATCCGTGAAGAGGTGCACTATTCCAACCCAAGCTTGCCTCTGATGCACCCTCCAGCCCACACCAAAGCCCCAGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGCCAACCAGCCAGGTTTaGGTCCTACCCCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGPTSQV*VLPPAR
Trigger: CCTGGCAGGGGGTAGGACCAAAACCTGGCTGGTTGG...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCGGCATTGGACAGCTCTaGCAGGGGCATGTTGTTGAT +
Preference number: 5 (lower is better)
Translates to: LASGRCWTAIGATVALFSGIGQL*QGHVVD
Trigger: ATCAACAACATGCCCCTGCAAGAGCTGTCCAATGCC...GGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp GGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTCGGTCAGACACAATCTaGGCCACACTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: GARQHADLLVSDLSKGRTRSDTI*ATLVST
Trigger: CGTGGACACCAGTGTGGCCAAGATTGTGTCTGACCG...AGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS TCA 90 bp TGGCACCTGAGTCTCTCCTGGACTTCCCTCCTCAAGGACCATGGCTaGGTCTGTATTAGAGCGTGGGAGAGTAGGAGGCTTGGCGGTGCC +
Preference number: 5 (lower is better)
Translates to: WHLSLSWTSLLKDHG*VCIRAWESRRLGGA
Trigger: GGCACCGCCAAGCCTCCTACTCTCCCACGCTCTAATACAGACTCAGCCATGGTCCTTGAGGAGGGAAGTCCAGGAGAGACTCAGGTGCCA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000228412.2
CDS TCA 90 bp GTGGGGTTGGATCGGCTGTGGTGTACCTGTGAGGCCATCTGGAGGTaGCAGAGCAGGATGGTGACAGTGAGCTCCATCACAACAGGGAGC +
Preference number: 5 (lower is better)
Translates to: VGLDRLWCTCEAIWR*QSRMVTVSSITTGS
Trigger: GCTCCCTGTTGTGATGGAGCTCACTGTCACCATCCTGCTCTGTCACCTCCAGATGGCCTCACAGGTACACCACAGCCGATCCAACCCCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227804.2
CDS-3UTR CAA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGACGACCCCATCCTTGTaGGGCAGGCCCAGTCGATGC +
Preference number: 5 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWTTPSL*GRPSRC
Trigger: GCATCGACTGGGCCTGCCCAACAAGGATGGGGTCGT...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGGCCAGGCAGCACGCAGATCTGGCGGTAGATAAGGCCTaGTTCCAGGCAGTACACCAT +
Preference number: 5 (lower is better)
Translates to: PPWPCFPPLSGARQHADLAVDKA*FQAVHH
Trigger: ATGGTGTACTGCCTGGAACAAGGCCTTATCTACCGC...CAGATCTGCGTGCTGCCTGGCCCCAGACAAGGGAGGAAAACAAGGCCACGGTGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTACCAACCAGCCAGGTTTaGGTCCTACCCCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLPTSQV*VLPPAR
Trigger: CCTGGCAGGGGGTAGGACCAAAACCTGGCTGGTTGG...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTGCCTGGGACTCCAGTTaGGCCGGTGCTTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFAWDSS*AGASFV
Trigger: GACAAAGGAAGCACCGGCCAAACTGGAGTCCCAGGC...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp GGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGTGCAGGGGCATGTTGTaGATGTCTGAGGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: GAGQQLGPPWPCFPPLSGCRGML*MSEEKG
Trigger: CCCCTTCTCCTCAGACATCAACAACATGCCCCTGCA...CCCAGACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp GGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTGTGTCCCGGTGCTCCTaGAAACGTTCAGCAGCCATA +
Preference number: 5 (lower is better)
Translates to: GARQHADLLVSDLSKGRTVSRCS*KRSAAI
Trigger: TATGGCTGCTGAACGTTTCAAGGAGCACCGGGACAC...AGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp GGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTACTGCTTGTCCACATCCTaGGTGGGCATCAGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: GQAARRSAGFRSEQGQDYCLSTS*VGIRVA
Trigger: TGCCACCCTGATGCCCACCAAGGATGTGGACAAGCA...GTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp GGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTACCGGTCAGACACAATCTaGGCCACACTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: GQAARRSAGFRSEQGQDYRSDTI*ATLVST
Trigger: CGTGGACACCAGTGTGGCCAAGATTGTGTCTGACCG...GTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGGCCACAAAGGACAGGTaGCGGTCAGACACAATCTTG +
Preference number: 5 (lower is better)
Translates to: PRSYWTSPPMGLAPMAGGATKDR*RSDTIL
Trigger: CAAGATTGTGTCTGACCGCAACCTGTCCTTTGTGGC...CCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS TCA 90 bp CTCCCAAACGATCACCCTGTCCCTGTACAATGGCCTTCAATAAGGTaGGAACTGCATGCCGGGCCTCTGGTGGCCGCTCTGGCTGTAGCA +
Preference number: 5 (lower is better)
Translates to: LPNDHPVPVQWPSIR*ELHAGPLVAALAVA
Trigger: TGCTACAGCCAGAGCGGCCACCAGAGGCCCGGCATGCAGTTCTCACCTTATTGAAGGCCATTGTACAGGGACAGGGTGATCGTTTGGGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 90 bp GGAGGGATAGATGTCAGTGGGGTTGGATCGGCTGTGGTGTACCTGTaGGGCCATCTGGAGGTGACAGAGCAGGATGGTGACAGTGAGCTC +
Preference number: 5 (lower is better)
Translates to: GGIDVSGVGSAVVYL*GHLEVTEQDGDSEL
Trigger: GAGCTCACTGTCACCATCCTGCTCTGTCACCTCCAGATGGCCTCACAGGTACACCACAGCCGATCCAACCCCACTGACATCTATCCCTCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227804.2
CDS GCA 90 bp AATGATGTCCAGCAGACTGTTGAAGTGGTGGGTGTGGCACCCCTCTaGCAGGTCCACCAGCAGCTGAGTAGCCAGCTTTCGGACCTGATG +
Preference number: 5 (lower is better)
Translates to: NDVQQTVEVVGVAPL*QVHQQLSSQLSDLM
Trigger: CATCAGGTCCGAAAGCTGGCTACTCAGCTGCTGGTGGACCTGGCAGAGGGGTGCCACACCCACCACTTCAACAGTCTGCTGGACATCATT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 90 bp CCAGCCGCTGGCACTGACAATGACTTGTACAGGGCCGTGTCCCGGTaGTCCTTGAAACGTTCAGCAGCCATAAGGGCATTGGACAGCTCT +
Preference number: 5 (lower is better)
Translates to: PAAGTDNDLYRAVSR*SLKRSAAIRALDSS
Trigger: AGAGCTGTCCAATGCCCTTATGGCTGCTGAACGTTTCAAGGAGCACCGGGACACGGCCCTGTACAAGTCATTGTCAGTGCCAGCGGCTGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 90 bp GGGCCACAAAGGACAGGTTGCGGTCAGACACAATCTTGGCCACACTaGTGTCCACGAGGCCTTCCATGTCTTTCCTGCACTGCAGGGTCA +
Preference number: 5 (lower is better)
Translates to: GPQRTGCGQTQSWPH*CPRGLPCLSCTAGS
Trigger: TGACCCTGCAGTGCAGGAAAGACATGGAAGGCCTCGTGGACACCAGTGTGGCCAAGATTGTGTCTGACCGCAACCTGTCCTTTGTGGCCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 90 bp GGCGGAGTCTTGCGATCCACTTGGAGGGATAGATGTCAGTGGGGTTaGATCGGCTGTGGTGTACCTGTGAGGCCATCTGGAGGTGACAGA +
Preference number: 5 (lower is better)
Translates to: GGVLRSTWRDRCQWG*IGCGVPVRPSGGDR
Trigger: TCTGTCACCTCCAGATGGCCTCACAGGTACACCACAGCCGATCCAACCCCACTGACATCTATCCCTCCAAGTGGATCGCAAGACTCCGCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227804.2
CDS-3UTR CAA 90 bp GGGGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTATTCGGATGCGATTGTaGAGGCCGCATTCACCACTC +
Preference number: 5 (lower is better)
Translates to: GARQHADLLVSDLSKGRTIRMRL*RPHSPL
Trigger: GAGTGGTGAATGCGGCCTCAACAATCGCATCCGAAT...AGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCCCC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGCACAGCTCCTTGACATaGATGGTGCGGCACAGGGTG +
Preference number: 5 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGHSSLT*MVRHRV
Trigger: CACCCTGTGCCGCACCATCAATGTCAAGGAGCTGTG...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp AAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGGGGTCACAGTGACAAGCTaGTTTCCAACCAGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: KKLLDKPTNGACPHGGWGVTVTS*FPTSQV
Trigger: AACCTGGCTGGTTGGAAACAAGCTTGTCACTGTGAC...CCCCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTT
58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTACCCAGGTGCCGTTTCTaGTCACAGCGGTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLPRCRF*SQRCLS
Trigger: GGACAAGCACCGCTGTGACAAGAAACGGCACCTGGG...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS TCA 90 bp CTGAGGCTCTATCCAGTTCCATGCAGTCACAGAGGCAGTAAGGGCTaGATCTCACGACCCCATCCTTGTTGGGCAGGCCCAGTCGATGCA +
Preference number: 5 (lower is better)
Translates to: LRLYPVPCSHRGSKG*ISRPHPCWAGPVDA
Trigger: TGCATCGACTGGGCCTGCCCAACAAGGATGGGGTCGTGAGATTCAGCCCTTACTGCCTCTGTGACTGCATGGAACTGGATAGAGCCTCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 90 bp GGCCCAGCAGCGACCGTGTACCAGTTCCCACACTTGTTGTCACAGTaGCAAGCTTGTTTCCAACCAGCCAGGTTTTGGTCCTACCCCCTG +
Preference number: 5 (lower is better)
Translates to: GPAATVYQFPHLLSQ*QACFQPARFWSYPL
Trigger: CAGGGGGTAGGACCAAAACCTGGCTGGTTGGAAACAAGCTTGTCACTGTGACAACAAGTGTGGGAACTGGTACACGGTCGCTGCTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 90 bp ACGGCGCTGCGGCACTCATTCCTGAAGAACCTCTCCATCAACAACTaGAAGTTCTGGATCCAGCCATCCTTGGCAGGGTGGATGGACTGG +
Preference number: 5 (lower is better)
Translates to: TALRHSFLKNLSINN*KFWIQPSLAGWMDW
Trigger: CCAGTCCATCCACCCTGCCAAGGATGGCTGGATCCAGAACTTGCAGTTGTTGATGGAGAGGTTCTTCAGGAATGAGTGCCGCAGCGCCGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 90 bp CCATATTTGCATGCAGGGCCATCTGTCGGGCCACAAAGGACAGGTTaGGGTCAGACACAATCTTGGCCACACTGGTGTCCACGAGGCCTT +
Preference number: 5 (lower is better)
Translates to: PYLHAGPSVGPQRTG*GQTQSWPHWCPRGL
Trigger: AAGGCCTCGTGGACACCAGTGTGGCCAAGATTGTGTCTGACCGCAACCTGTCCTTTGTGGCCCGACAGATGGCCCTGCATGCAAATATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 90 bp CTCTTCACGGATCCTCTGGCGGAGACGCTTAATGTGGCGGAGTCTTaGGATCCACTTGGAGGGATAGATGTCAGTGGGGTTGGATCGGCT +
Preference number: 5 (lower is better)
Translates to: LFTDPLAETLNVAES*DPLGGIDVSGVGSA
Trigger: AGCCGATCCAACCCCACTGACATCTATCCCTCCAAGTGGATCGCAAGACTCCGCCACATTAAGCGTCTCCGCCAGAGGATCCGTGAAGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS CCA 90 bp CCATCTGTCGGGCCACAAAGGACAGGTTGCGGTCAGACACAATCTTaGCCACACTGGTGTCCACGAGGCCTTCCATGTCTTTCCTGCACT +
Preference number: 5 (lower is better)
Translates to: PSVGPQRTGCGQTQS*PHWCPRGLPCLSCT
Trigger: AGTGCAGGAAAGACATGGAAGGCCTCGTGGACACCAGTGTGGCCAAGATTGTGTCTGACCGCAACCTGTCCTTTGTGGCCCGACAGATGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 90 bp GGCGGAGTCTTGCGATCCACTTGGAGGGATAGATGTCAGTGGGGTTaGATCGGCTGTGGTGTACCTGTGAGGCCATATTTGCATGCAGGG +
Preference number: 5 (lower is better)
Translates to: GGVLRSTWRDRCQWG*IGCGVPVRPYLHAG
Trigger: CCCTGCATGCAAATATGGCCTCACAGGTACACCACAGCCGATCCAACCCCACTGACATCTATCCCTCCAAGTGGATCGCAAGACTCCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 90 bp ACCATGGCTGAGTCTGCCCAGGAAACGCTCCTGTGCAGCTGTCCTTaGCAGCTGGGCTGGTACAGGGAGGAGAAAGAAGCCACTGTATTA +
Preference number: 5 (lower is better)
Translates to: TMAESAQETLLCSCP*QLGWYREEKEATVL
Trigger: TAATACAGTGGCTTCTTTCTCCTCCCTGTACCAGCCCAGCTGCCAAGGACAGCTGCACAGGAGCGTTTCCTGGGCAGACTCAGCCATGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227745.2
CDS-3UTR CAA 90 bp CGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGATAAACTCAGTCTGTTaGCCTTCTGCACACCTGGGA +
Preference number: 5 (lower is better)
Translates to: RAGAGQQLGPPWPCFPPLINSVC*PSAHLG
Trigger: TCCCAGGTGTGCAGAAGGCAAACAGACTGAGTTTAT...CAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAGCCGCTCAAGGGTCTTaGGAGCTGAAAGCATGGAGC +
Preference number: 5 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLAAQGS*ELKAWS
Trigger: GCTCCATGCTTTCAGCTCCAAAGACCCTTGAGCGGC...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGGCCGCTCAAGGGTCTTaGGAGCTGAAAGCATGGAGC +
Preference number: 5 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWAAQGS*ELKAWS
Trigger: GCTCCATGCTTTCAGCTCCAAAGACCCTTGAGCGGC...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CCTGCTTCTGTGGGCTCATCTGCAGCTCTAGCCTGGATTCTGCCCCAACCCCAAGCGGTAGATAAGGCCTaGTTCCAGGCAGTACACCAT +
Preference number: 5 (lower is better)
Translates to: PASVGSSAALAWILPQPQAVDKA*FQAVHH
Trigger: ATGGTGTACTGCCTGGAACAAGGCCTTATCTACCGC...TTGGGGTTGGGGCAGAATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGGAGAGTAGGAGGCTaGGCGGTGCCAGCCGCTGGC +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATGRVGG*AVPAAG
Trigger: GCCAGCGGCTGGCACCGCCAAGCCTCCTACTCTCCC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGGGAGAGTAGGAGGCTaGGCGGTGCCAGCCGCTGGC +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGGRVGG*AVPAAG
Trigger: GCCAGCGGCTGGCACCGCCAAGCCTCCTACTCTCCC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTACGCCGCAGCTCTGCTCTaGAAGTTATCCCTTTCTACC +
Preference number: 5 (lower is better)
Translates to: GQAARRSAGFRSEQGQDYAAALL*KLSLST
Trigger: GGTAGAAAGGGATAACTTCAAGAGCAGAGCTGCGGC...GTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGTGCTTGTCCACATCCTaGGTGGGCATCAGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWCLSTS*VGIRVA
Trigger: TGCCACCCTGATGCCCACCAAGGATGTGGACAAGCA...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp ATCCGAGTCTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTGCTATCCTCAAACTTTaGGGTCTCTCATTAAGACTG +
Preference number: 5 (lower is better)
Translates to: IRVWPRAGAGQQLGPPWPAILKL*GLSLRL
Trigger: CAGTCTTAATGAGAGACCCAAAAGTTTGAGGATAGC...AGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAGACTCGGAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000226284.2
CDS TCA 90 bp CATAAGGGCATTGGACAGCTCTTGCAGGGGCATGTTGTTGATGTCTaGGGAGAAGGGGCTGAGCGGGTTCTCCAAGCTCATCAGCCAGCT +
Preference number: 5 (lower is better)
Translates to: HKGIGQLLQGHVVDV*GEGAERVLQAHQPA
Trigger: AGCTGGCTGATGAGCTTGGAGAACCCGCTCAGCCCCTTCTCCTCAGACATCAACAACATGCCCCTGCAAGAGCTGTCCAATGCCCTTATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 90 bp AGCTCTGCTCTTGAAGTTATCCCTTTCTACCCTCTTTCCCCTTCGTaGTGGAGCGGAATCAGAGATGGTATAGCCTCGGGGCCGGAGGCC +
Preference number: 5 (lower is better)
Translates to: SSALEVIPFYPLSPS*WSGIRDGIASGPEA
Trigger: GGCCTCCGGCCCCGAGGCTATACCATCTCTGATTCCGCTCCATCACGAAGGGGAAAGAGGGTAGAAAGGGATAACTTCAAGAGCAGAGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 90 bp TGCTCCTTGAAACGTTCAGCAGCCATAAGGGCATTGGACAGCTCTTaGAGGGGCATGTTGTTGATGTCTGAGGAGAAGGGGCTGAGCGGG +
Preference number: 5 (lower is better)
Translates to: CSLKRSAAIRALDSS*RGMLLMSEEKGLSG
Trigger: CCCGCTCAGCCCCTTCTCCTCAGACATCAACAACATGCCCCTGCAAGAGCTGTCCAATGCCCTTATGGCTGCTGAACGTTTCAAGGAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 90 bp AACTCGTTCTGGTCACATAGCTCCTCCACAGTGGTCAGCAGGTCATaGACGATGGTCTTGAGTTCCGGGCTGTCCAGGTTCTGGAGTTGC +
Preference number: 5 (lower is better)
Translates to: NSFWSHSSSTVVSRS*TMVLSSGLSRFWSC
Trigger: GCAACTCCAGAACCTGGACAGCCCGGAACTCAAGACCATCGTCCATGACCTGCTGACCACTGTGGAGGAGCTATGTGACCAGAACGAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CTGGCCTCGGGCAGGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTTGAACTTGACCAGGTaGACAAGTACCAGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: LASGRCWTAIGATVALFSLNLTR*TSTRRN
Trigger: ATTCCTTCTGGTACTTGTCAACCTGGTCAAGTTCAA...GGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACCTGCCCGAGGCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGATGTCCAGCAGACTGTaGAAGTGGTGGGTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWMSSRL*KWWVWH
Trigger: GTGCCACACCCACCACTTCAACAGTCTGCTGGACAT...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAATGTCCAGCAGACTGTaGAAGTGGTGGGTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLMSSRL*KWWVWH
Trigger: GTGCCACACCCACCACTTCAACAGTCTGCTGGACAT...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTGCGGTAGATAAGGCCTaGTTCCAGGCAGTACACCAT +
Preference number: 5 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFAVDKA*FQAVHH
Trigger: ATGGTGTACTGCCTGGAACAAGGCCTTATCTACCGC...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTGGGACTGCAGTGAAATaGGAGAACACATATCGGGCC +
Preference number: 5 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFGTAVK*ENTYRA
Trigger: GGCCCGATATGTGTTCTCCAATTTCACTGCAGTCCC...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAGTGTCCCGGTGCTCCTaGAAACGTTCAGCAGCCATA +
Preference number: 5 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLVSRCS*KRSAAI
Trigger: TATGGCTGCTGAACGTTTCAAGGAGCACCGGGACAC...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CAGACAAGACAAAGTCAAATAAAGAAGCTGTCTGACTGCTGTCTGTGCTGCTCTGGGAGAGTAGGAGGCTaGGCGGTGCCAGCCGCTGGC +
Preference number: 5 (lower is better)
Translates to: QTRQSQIKKLSDCCLCCSGRVGG*AVPAAG
Trigger: GCCAGCGGCTGGCACCGCCAAGCCTCCTACTCTCCC...AGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTGACTTTGTCTTGTCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp AAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGCGGGTGGGGGTTAATGGTGCCCAGTTaGAAGTCCTCACCAGAATCA +
Preference number: 5 (lower is better)
Translates to: KKLLDKPTNGACPHGGWGLMVPS*KSSPES
Trigger: TGATTCTGGTGAGGACTTCAAACTGGGCACCATTAA...CCCCCACCCGCCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTGCCACAAAGGACAGGTaGCGGTCAGACACAATCTTG +
Preference number: 5 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFATKDR*RSDTIL
Trigger: CAAGATTGTGTCTGACCGCAACCTGTCCTTTGTGGC...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS TCA 90 bp CACATAGCTCCTCCACAGTGGTCAGCAGGTCATGGACGATGGTCTTaGGTTCCGGGCTGTCCAGGTTCTGGAGTTGCTGAAGTAGTCGTT +
Preference number: 5 (lower is better)
Translates to: HIAPPQWSAGHGRWS*VPGCPGSGVAEVVV
Trigger: AACGACTACTTCAGCAACTCCAGAACCTGGACAGCCCGGAACTCAAGACCATCGTCCATGACCTGCTGACCACTGTGGAGGAGCTATGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 90 bp CGAAAGGGCAGTCGGCACCTGATGAACCACATGGCTATGACGTGGTaGGCCAGACACACAATGTACTGGTTGAACTTGGAGGGGTTGGTG +
Preference number: 5 (lower is better)
Translates to: RKGSRHLMNHMAMTW*ARHTMYWLNLEGLV
Trigger: CACCAACCCCTCCAAGTTCAACCAGTACATTGTGTGTCTGGCTCACCACGTCATAGCCATGTGGTTCATCAGGTGCCGACTGCCCTTTCG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 90 bp GTTGGTGTATGGCAAGGAGATGGCAAACACGCTGGCATACTGCTCTaGAGCAAAGTTCCTGTAGAGGTGGGGCAGCCTGGCCAAAGTAGA +
Preference number: 5 (lower is better)
Translates to: VGVWQGDGKHAGILL*SKVPVEVGQPGQSR
Trigger: TCTACTTTGGCCAGGCTGCCCCACCTCTACAGGAACTTTGCTGCAGAGCAGTATGCCAGCGTGTTTGCCATCTCCTTGCCATACACCAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 90 bp TCCCCAGAGTGCCATCCCTACAAAGAACACAGCTCCTCTCAGCAGTaGGGCATCTTCCATGTAGGATCTGTCCTCCATGATGCGGCACAT +
Preference number: 5 (lower is better)
Translates to: SPECHPYKEHSSSQQ*GIFHVGSVLHDAAH
Trigger: ATGTGCCGCATCATGGAGGACAGATCCTACATGGAAGATGCCCCACTGCTGAGAGGAGCTGTGTTCTTTGTAGGGATGGCACTCTGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 90 bp GTTTCTGTGAGCTCCAAGTGGAGATTCTTCAAGTTGTCATCAGCCTaGGCCATAGAGTTCTCATCCGCAGACCCCAGGCTGGCGCTCGTA +
Preference number: 5 (lower is better)
Translates to: VSVSSKWRFFKLSSA*AIEFSSADPRLALV
Trigger: TACGAGCGCCAGCCTGGGGTCTGCGGATGAGAACTCTATGGCCCAGGCTGATGACAACTTGAAGAATCTCCACTTGGAGCTCACAGAAAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAATTCGGATGCGATTGTaGAGGCCGCATTCACCACTC +
Preference number: 5 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLIRMRL*RPHSPL
Trigger: GAGTGGTGAATGCGGCCTCAACAATCGCATCCGAAT...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CAAATAAAGAAGCTGTCTGACTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCGGCTCACACAGCTCCTaGACATTGATGGTGCGGCAC +
Preference number: 5 (lower is better)
Translates to: QIKKLSDCCLCCSLNSTGGSHSS*TLMVRH
Trigger: GTGCCGCACCATCAATGTCAAGGAGCTGTGTGAGCC...GCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCTCACGACCCCATCCTaGTTGGGCAGGCCCAGTCGA +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLALTTPS*LGRPSR
Trigger: TCGACTGGGCCTGCCCAACAAGGATGGGGTCGTGAG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAAATAAAGAAGCTGTCTGACTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCTGGCCGGTGCTTCCTTaGTCTGCCTCACATGTGTGC +
Preference number: 5 (lower is better)
Translates to: QIKKLSDCCLCCSLNSTGWPVLP*SASHVC
Trigger: GCACACATGTGAGGCAGACAAAGGAAGCACCGGCCA...GCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp TCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTACTGTGGGATGAAAGATGCCTGGCCGGTGCTTCCTTaGTCTGCCTCACATGTGTGC +
Preference number: 5 (lower is better)
Translates to: SAGFRSEQGQDYCGMKDAWPVLP*SASHVC
Trigger: GCACACATGTGAGGCAGACAAAGGAAGCACCGGCCA...GGCATCTTTCATCCCACAGTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTTCTTGCAGGGGCATGTaGTTGATGTCTGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFSCRGM*LMSEEK
Trigger: CTTCTCCTCAGACATCAACAACATGCCCCTGCAAGA...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGGCCGCAGCTCTGCTCTaGAAGTTATCCCTTTCTACC +
Preference number: 5 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWAAALL*KLSLST
Trigger: GGTAGAAAGGGATAACTTCAAGAGCAGAGCTGCGGC...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAAAGAGCCATGCTCATTaGACAGGATGGCCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLKSHAH*TGWPAH
Trigger: GTGAGCTGGCCATCCTGTCAAATGAGCATGGCTCTT...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTGTACACCTTGTCTGGTaGGCAGTCCTTGAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFVHLVW*AVLELN
Trigger: ATTGAGCTCAAGGACTGCCAACCAGACAAGGTGTAC...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCCTGTGCAGCTGTCCTaGGCAGCTGGGCTGGTACAG +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAPVQLS*AAGLVQ
Trigger: CTGTACCAGCCCAGCTGCCAAGGACAGCTGCACAGG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227745.2
CDS TCA 90 bp GTTCCGGGCTGTCCAGGTTCTGGAGTTGCTGAAGTAGTCGTTCAATaGTGTCCAGCAGAATATCCCATGTCACAGCCTGGAGCTCCTTCC +
Preference number: 5 (lower is better)
Translates to: VPGCPGSGVAEVVVQ*CPAEYPMSQPGAPS
Trigger: GGAAGGAGCTCCAGGCTGTGACATGGGATATTCTGCTGGACATCATTGAACGACTACTTCAGCAACTCCAGAACCTGGACAGCCCGGAAC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 90 bp TCAGAAACTCCGTGTACCTGTAAGAGCCATGCTCATTTGACAGGATaGCCAGCTCACTGCTGCTCTGGCCTTCTCCCACATACAGGACAG +
Preference number: 5 (lower is better)
Translates to: SETPCTCKSHAHLTG*PAHCCSGLLPHTGQ
Trigger: CTGTCCTGTATGTGGGAGAAGGCCAGAGCAGCAGTGAGCTGGCCATCCTGTCAAATGAGCATGGCTCTTACAGGTACACGGAGTTTCTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 90 bp TCCTCGCCACATACATCCAGTCCACCTAAGTACACCTTGTCTGGTTaGCAGTCCTTGAGCTCAATAAGCCGACCCAGGCCTGTCAGAAAC +
Preference number: 5 (lower is better)
Translates to: SSPHTSSPPKYTLSG*QSLSSISRPRPVRN
Trigger: GTTTCTGACAGGCCTGGGTCGGCTTATTGAGCTCAAGGACTGCCAACCAGACAAGGTGTACTTAGGTGGACTGGATGTATGTGGCGAGGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 90 bp CCGGAAGGCCTCGGCTGCACAGCTCTCTTTGAATTCTTTCACAGGTaGAGAGTTATTCAGGCCTTGTTTGGGGGCTCTGGCTATCCTCAA +
Preference number: 5 (lower is better)
Translates to: PEGLGCTALFEFFHR*RVIQALFGGSGYPQ
Trigger: TTGAGGATAGCCAGAGCCCCCAAACAAGGCCTGAATAACTCTCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAGCCGAGGCCTTCCGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226284.2
ENSMUST00000227658.2
ENSMUST00000227745.2
CDS-3UTR CAA 90 bp CCTGCTTCTGTGGGCTCATCTGCAGCTCTAGCCTGGATTCTGCCCCAACCCCAAAATCCCAACAGTATCTaGAACTTCTCCTTCAAGCCG +
Preference number: 5 (lower is better)
Translates to: PASVGSSAALAWILPQPQNPNSI*NFSFKP
Trigger: CGGCTTGAAGGAGAAGTTCAAGATACTGTTGGGATT...TTGGGGTTGGGGCAGAATCCAGGCTAGAGCTGCAGATGAGCCCACAGAAGCAGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTGTAATGTGCCTCCCATaGTCTGTGAGGGCCTTAAAA +
Preference number: 5 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFVMCLP*SVRALK
Trigger: TTTTAAGGCCCTCACAGACAATGGGAGGCACATTAC...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAGAACATCCAACACCTaGATGCGCACGGCGCTGCGG +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLARTSNT*MRTALR
Trigger: CCGCAGCGCCGTGCGCATCAAGGTGTTGGATGTTCT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAACGACCCCATCCTTGTaGGGCAGGCCCAGTCGATGC +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGTTPSL*GRPSRC
Trigger: GCATCGACTGGGCCTGCCCAACAAGGATGGGGTCGT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAACGACCCCATCCTTGTaGGGCAGGCCCAGTCGATGC +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATTTPSL*GRPSRC
Trigger: GCATCGACTGGGCCTGCCCAACAAGGATGGGGTCGT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACTCACGACCCCATCCTaGTTGGGCAGGCCCAGTCGA +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGLTTPS*LGRPSR
Trigger: TCGACTGGGCCTGCCCAACAAGGATGGGGTCGTGAG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACTCACGACCCCATCCTaGTTGGGCAGGCCCAGTCGA +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATLTTPS*LGRPSR
Trigger: TCGACTGGGCCTGCCCAACAAGGATGGGGTCGTGAG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAAAGACAGGAGGACATaGGAACGCAAACCCTTAGTG +
Preference number: 5 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFKDRRT*ERKPLV
Trigger: CACTAAGGGTTTGCGTTCCAATGTCCTCCTGTCTTT...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACCAACCAGCCAGGTTTaGGTCCTACCCCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGPTSQV*VLPPAR
Trigger: CCTGGCAGGGGGTAGGACCAAAACCTGGCTGGTTGG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACCAACCAGCCAGGTTTaGGTCCTACCCCCTGCCAGG +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATPTSQV*VLPPAR
Trigger: CCTGGCAGGGGGTAGGACCAAAACCTGGCTGGTTGG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCGCCTGGGACTCCAGTTaGGCCGGTGCTTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: LVSAAYLPSSYHLLSMSTAWDSS*AGASFV
Trigger: GACAAAGGAAGCACCGGCCAAACTGGAGTCCCAGGC...GGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGCCTGGGACTCCAGTTaGGCCGGTGCTTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAAWDSS*AGASFV
Trigger: GACAAAGGAAGCACCGGCCAAACTGGAGTCCCAGGC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGTCTTGCAGGGGCATGTaGTTGATGTCTGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWSCRGM*LMSEEK
Trigger: CTTCTCCTCAGACATCAACAACATGCCCCTGCAAGA...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTAAACACAAAGCTAGGGTaGATGCCTGGCACCTTCTCA +
Preference number: 5 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLNTKLG*MPGTFS
Trigger: TGAGAAGGTGCCAGGCATCAACCCTAGCTTTGTGTT...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTCGTTCAAAGGACTCATaGGGCAATAGGATGGGCTTA +
Preference number: 5 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFRSKDS*GNRMGL
Trigger: TAAGCCCATCCTATTGCCCAATGAGTCCTTTGAACG...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCCCAGGTGCCGTTTCTaGTCACAGCGGTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAPRCRF*SQRCLS
Trigger: GGACAAGCACCGCTGTGACAAGAAACGGCACCTGGG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTGTAGCCTCAGGGGCTaGAGCTGGGGCTTTGGTGTG +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLACSLRG*SWGFGV
Trigger: CACACCAAAGCCCCAGCTCAAGCCCCTGAGGCTACA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CTCTCCCACAGGGGACCTCTTGGGGACTGCAGTGAAATTGGAGAACACATATCGTTATTCAGGCCTTGTTaGGGGGCTCTGGCTATCCTC +
Preference number: 5 (lower is better)
Translates to: LSHRGPLGDCSEIGEHISLFRPC*GALAIL
Trigger: GAGGATAGCCAGAGCCCCCAAACAAGGCCTGAATAA...CGATATGTGTTCTCCAATTTCACTGCAGTCCCCAAGAGGTCCCCTGTGGGAGAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000227658.2
CDS-3UTR CAA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGGCTGCACAGCTCTCTTaGAATTCTTTCACAGGTGGA +
Preference number: 5 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGAAQLS*NSFTGG
Trigger: TCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAGC...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000226284.2
CDS TCA 90 bp GCCATAGAGTTCTCATCCGGAAGGCCTCGGCTGCACAGCTCTCTTTaGATTCTTTCACAGGTGGAGAGTTATTCAGGCCTTGTTTGGGGG +
Preference number: 5 (lower is better)
Translates to: AIEFSSGRPRLHSSL*ILSQVESYSGLVWG
Trigger: CCCCCAAACAAGGCCTGAATAACTCTCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAGCCGAGGCCTTCCGGATGAGAACTCTATGGC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227658.2
CDS-3UTR CAA 90 bp GAAAGATGCCAAGAAGTTACTGGACAAGCCCACCAATGGGGCTTGCCCCCATGGGTAATGTGCCTCCCATaGTCTGTGAGGGCCTTAAAA +
Preference number: 5 (lower is better)
Translates to: ERCQEVTGQAHQWGLPPWVMCLP*SVRALK
Trigger: TTTTAAGGCCCTCACAGACAATGGGAGGCACATTAC...CCATGGGGGCAAGCCCCATTGGTGGGCTTGTCCAGTAACTTCTTGGCATCTTTC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCACAGCTCCTTGACATaGATGGTGCGGCACAGGGTG +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAHSSLT*MVRHRV
Trigger: CACCCTGTGCCGCACCATCAATGTCAAGGAGCTGTG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCGGCTCACACAGCTCCTaGACATTGATGGTGCGGCAC +
Preference number: 5 (lower is better)
Translates to: VSAAYLPSSYHLLSMSTIGSHSS*TLMVRH
Trigger: GTGCCGCACCATCAATGTCAAGGAGCTGTGTGAGCC...GATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGGCTCACACAGCTCCTaGACATTGATGGTGCGGCAC +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAGSHSS*TLMVRH
Trigger: GTGCCGCACCATCAATGTCAAGGAGCTGTGTGAGCC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GGTGCTGGACAGCAATTGGGGCCACCGTGGCCTTGTTTTCCTCCCTTGTCTGGGTCCTTCCTATACTTCTaGATGAGTCTTGTTATGGAC +
Preference number: 5 (lower is better)
Translates to: GAGQQLGPPWPCFPPLSGSFLYF*MSLVMD
Trigger: GTCCATAACAAGACTCATCAAGAAGTATAGGAAGGA...CCCAGACAAGGGAGGAAAACAAGGCCACGGTGGCCCCAATTGCTGTCCAGCACC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAAGAACATCCAACACCTaGATGCGCACGGCGCTGCGG +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGRTSNT*MRTALR
Trigger: CCGCAGCGCCGTGCGCATCAAGGTGTTGGATGTTCT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAGAACATCCAACACCTaGATGCGCACGGCGCTGCGG +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATRTSNT*MRTALR
Trigger: CCGCAGCGCCGTGCGCATCAAGGTGTTGGATGTTCT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGCCGCTCAAGGGTCTTaGGAGCTGAAAGCATGGAGC +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAAAQGS*ELKAWS
Trigger: GCTCCATGCTTTCAGCTCCAAAGACCCTTGAGCGGC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp TGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTATGGAGATTCTTCAAGTaGTCATCAGCCTGGGCCATA +
Preference number: 5 (lower is better)
Translates to: CCLCCSLNSTGQMCVCSLWRFFK*SSAWAI
Trigger: TATGGCCCAGGCTGATGACAACTTGAAGAATCTCCA...TAAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCCCACAGGGGACCTCTaGGGGACTGCAGTGAAATTG +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAPTGDL*GTAVKL
Trigger: CAATTTCACTGCAGTCCCCAAGAGGTCCCCTGTGGG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTGGCCGGTGCTTCCTTaGTCTGCCTCACATGTGTGC +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAWPVLP*SASHVC
Trigger: GCACACATGTGAGGCAGACAAAGGAAGCACCGGCCA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGCCTGGGACTCCAGTTaGGCCGGTGCTTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATAWDSS*AGASFV
Trigger: GACAAAGGAAGCACCGGCCAAACTGGAGTCCCAGGC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGCCCAGGTGCCGTTTCTaGTCACAGCGGTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: VRVQFISCRSTVRIATWLPRCRF*SQRCLS
Trigger: GGACAAGCACCGCTGTGACAAGAAACGGCACCTGGG...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CCTGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGCCCAGGTGCCGTTTCTaGTCACAGCGGTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: PGFCPNPKQTRQSQIKKLPRCRF*SQRCLS
Trigger: GGACAAGCACCGCTGTGACAAGAAACGGCACCTGGG...CAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACCCAGGTGCCGTTTCTaGTCACAGCGGTGCTTGTCC +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATPRCRF*SQRCLS
Trigger: GGACAAGCACCGCTGTGACAAGAAACGGCACCTGGG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp ATGGCGGGTGGGGGAAAGAGAATGTATGTGATGGCACCTGCCTGCTTCTGTGGGATCACATGGACAAAGTaGAACTGGCCCTTAATGGTG +
Preference number: 5 (lower is better)
Translates to: MAGGGKRMYVMAPACFCGITWTK*NWPLMV
Trigger: CACCATTAAGGGCCAGTTCAACTTTGTCCATGTGAT...CCCACAGAAGCAGGCAGGTGCCATCACATACATTCTCTTTCCCCCACCCGCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGTGTAGCCTCAGGGGCTaGAGCTGGGGCTTTGGTGTG +
Preference number: 5 (lower is better)
Translates to: VRVQFISCRSTVRIATWLCSLRG*SWGFGV
Trigger: CACACCAAAGCCCCAGCTCAAGCCCCTGAGGCTACA...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATGTAGCCTCAGGGGCTaGAGCTGGGGCTTTGGTGTG +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGCSLRG*SWGFGV
Trigger: CACACCAAAGCCCCAGCTCAAGCCCCTGAGGCTACA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS GCA 90 bp ATAGAAACAAAGTCATTGCCCAGGTGCCGTTTCTTGTCACAGCGGTaGTTGTCCACATCCTTGGTGGGCATCAGGGTGGCAATGTGGAAA +
Preference number: 5 (lower is better)
Translates to: IETKSLPRCRFLSQR*LSTSLVGIRVAMWK
Trigger: TTTCCACATTGCCACCCTGATGCCCACCAAGGATGTGGACAAGCACCGCTGTGACAAGAAACGGCACCTGGGCAATGACTTTGTTTCTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS GCA 90 bp CACATGTTCAGATACACTGATGCTGCGGCACCGGAAGGCCTCGGCTaGACAGCTCTCTTTGAATTCTTTCACAGGTGGAGAGTTATTCAG +
Preference number: 5 (lower is better)
Translates to: HMFRYTDAAAPEGLG*TALFEFFHRWRVIQ
Trigger: CTGAATAACTCTCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAGCCGAGGCCTTCCGGTGCCGCAGCATCAGTGTATCTGAACATGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226284.2
ENSMUST00000227745.2
CDS CCA 90 bp AGCCAGACACACAATGTACTGGTTGAACTTGGAGGGGTTGGTGTATaGCAAGGAGATGGCAAACACGCTGGCATACTGCTCTGCAGCAAA +
Preference number: 5 (lower is better)
Translates to: SQTHNVLVELGGVGV*QGDGKHAGILLCSK
Trigger: TTTGCTGCAGAGCAGTATGCCAGCGTGTTTGCCATCTCCTTGCCATACACCAACCCCTCCAAGTTCAACCAGTACATTGTGTGTCTGGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTTTGAACTTGACCAGGTaGACAAGTACCAGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFLNLTR*TSTRRN
Trigger: ATTCCTTCTGGTACTTGTCAACCTGGTCAAGTTCAA...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACACAGCTCCTTGACATaGATGGTGCGGCACAGGGTG +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGHSSLT*MVRHRV
Trigger: CACCCTGTGCCGCACCATCAATGTCAAGGAGCTGTG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACACAGCTCCTTGACATaGATGGTGCGGCACAGGGTG +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATHSSLT*MVRHRV
Trigger: CACCCTGTGCCGCACCATCAATGTCAAGGAGCTGTG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GGCCAGGCAGCACGCAGATCTGCTGGTTTCAGATCTGAGCAAGGGCAGGACTACTCCTTCCTATACTTCTaGATGAGTCTTGTTATGGAC +
Preference number: 5 (lower is better)
Translates to: GQAARRSAGFRSEQGQDYSFLYF*MSLVMD
Trigger: GTCCATAACAAGACTCATCAAGAAGTATAGGAAGGA...GTAGTCCTGCCCTTGCTCAGATCTGAAACCAGCAGATCTGCGTGCTGCCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CCTGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGTCATGGACGATGGTCTaGAGTTCCGGGCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: PGFCPNPKQTRQSQIKKLSWTMV*SSGLSR
Trigger: CCTGGACAGCCCGGAACTCAAGACCATCGTCCATGA...CAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGTCATGGACGATGGTCTaGAGTTCCGGGCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: VRVQFISCRSTVRIATWLSWTMV*SSGLSR
Trigger: CCTGGACAGCCCGGAACTCAAGACCATCGTCCATGA...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATCATGGACGATGGTCTaGAGTTCCGGGCTGTCCAGG +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGSWTMV*SSGLSR
Trigger: CCTGGACAGCCCGGAACTCAAGACCATCGTCCATGA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCATGTCCAGCAGACTGTaGAAGTGGTGGGTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: VSAAYLPSSYHLLSMSTIMSSRL*KWWVWH
Trigger: GTGCCACACCCACCACTTCAACAGTCTGCTGGACAT...GATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGCCGCTCAAGGGTCTTaGGAGCTGAAAGCATGGAGC +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATAAQGS*ELKAWS
Trigger: GCTCCATGCTTTCAGCTCCAAAGACCCTTGAGCGGC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCAGGACAGGAAGCGCCTaGATGATGATGTCGGGCATC +
Preference number: 5 (lower is better)
Translates to: LVSAAYLPSSYHLLSMSTRTGSA*MMMSGI
Trigger: GATGCCCGACATCATCATCAAGGCGCTTCCTGTCCT...GGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAGGACAGGAAGCGCCTaGATGATGATGTCGGGCATC +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLARTGSA*MMMSGI
Trigger: GATGCCCGACATCATCATCAAGGCGCTTCCTGTCCT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp TCTCCCACAGGGGACCTCTTGGGGACTGCAGTGAAATTGGAGAACACATATCGGAAAGACAGGAGGACATaGGAACGCAAACCCTTAGTG +
Preference number: 5 (lower is better)
Translates to: SPTGDLLGTAVKLENTYRKDRRT*ERKPLV
Trigger: CACTAAGGGTTTGCGTTCCAATGTCCTCCTGTCTTT...CCGATATGTGTTCTCCAATTTCACTGCAGTCCCCAAGAGGTCCCCTGTGGGAGA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227658.2
CDS-3UTR CAA 90 bp CTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCCAGATGTGCGTGTGCAGTTTGTCTGTATTCTGCTTTaGGGTCTCTCATTAAGACTG +
Preference number: 5 (lower is better)
Translates to: LLSVLLSELHGPDVRVQFVCILL*GLSLRL
Trigger: CAGTCTTAATGAGAGACCCAAAAGCAGAATACAGAC...AAACTGCACACGCACATCTGGCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGCCCACAGGGGACCTCTaGGGGACTGCAGTGAAATTG +
Preference number: 5 (lower is better)
Translates to: VRVQFISCRSTVRIATWLPTGDL*GTAVKL
Trigger: CAATTTCACTGCAGTCCCCAAGAGGTCCCCTGTGGG...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACCCACAGGGGACCTCTaGGGGACTGCAGTGAAATTG +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATPTGDL*GTAVKL
Trigger: CAATTTCACTGCAGTCCCCAAGAGGTCCCCTGTGGG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACCCACAGGGGACCTCTaGGGGACTGCAGTGAAATTG +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGPTGDL*GTAVKL
Trigger: CAATTTCACTGCAGTCCCCAAGAGGTCCCCTGTGGG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGTGGCCGGTGCTTCCTTaGTCTGCCTCACATGTGTGC +
Preference number: 5 (lower is better)
Translates to: VRVQFISCRSTVRIATWLWPVLP*SASHVC
Trigger: GCACACATGTGAGGCAGACAAAGGAAGCACCGGCCA...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACATGGCCGGTGCTTCCTTaGTCTGCCTCACATGTGTGC +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATWPVLP*SASHVC
Trigger: GCACACATGTGAGGCAGACAAAGGAAGCACCGGCCA...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp TGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGTCGCCTGGGACTCCAGTTaGGCCGGTGCTTCCTTTGTC +
Preference number: 5 (lower is better)
Translates to: WILPQPQTDKTKSNKEAVAWDSS*AGASFV
Trigger: GACAAAGGAAGCACCGGCCAAACTGGAGTCCCAGGC...GACAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTGCAGGGGCATGTTGTaGATGTCTGAGGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLACRGML*MSEEKG
Trigger: CCCCTTCTCCTCAGACATCAACAACATGCCCCTGCA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAAATAAAGAAGCTGTCTGACTGCTGTCTGTGCTGCTCTCTGAACTCCACGGGCAACACAAAGCTAGGGTaGATGCCTGGCACCTTCTCA +
Preference number: 5 (lower is better)
Translates to: QIKKLSDCCLCCSLNSTGNTKLG*MPGTFS
Trigger: TGAGAAGGTGCCAGGCATCAACCCTAGCTTTGTGTT...GCCCGTGGAGTTCAGAGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACATGCTTGTCCACATCCTaGGTGGGCATCAGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATCLSTS*VGIRVA
Trigger: TGCCACCCTGATGCCCACCAAGGATGTGGACAAGCA...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATGCTTGTCCACATCCTaGGTGGGCATCAGGGTGGCA +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGCLSTS*VGIRVA
Trigger: TGCCACCCTGATGCCCACCAAGGATGTGGACAAGCA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGCGGTCAGACACAATCTaGGCCACACTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: VRVQFISCRSTVRIATWLRSDTI*ATLVST
Trigger: CGTGGACACCAGTGTGGCCAAGATTGTGTCTGACCG...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACGGTCAGACACAATCTaGGCCACACTGGTGTCCACG +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATRSDTI*ATLVST
Trigger: CGTGGACACCAGTGTGGCCAAGATTGTGTCTGACCG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCCTGTGAGGCCATATTaGCATGCAGGGCCATCTGTC +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAPVRPY*HAGPSV
Trigger: GACAGATGGCCCTGCATGCAAATATGGCCTCACAGG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCGCCACCACTCACATTaGCATGCAGGGCCATCTTTC +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLARHHSH*HAGPSF
Trigger: GAAAGATGGCCCTGCATGCAAATGTGAGTGGTGGCG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227804.2
CDS-3UTR CAA 90 bp CTCTCCCACAGGGGACCTCTTGGGGACTGCAGTGAAATTGGAGAACACATATCGGCTGCACAGCTCTCTTaGAATTCTTTCACAGGTGGA +
Preference number: 5 (lower is better)
Translates to: LSHRGPLGDCSEIGEHISAAQLS*NSFTGG
Trigger: TCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAGC...CGATATGTGTTCTCCAATTTCACTGCAGTCCCCAAGAGGTCCCCTGTGGGAGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227658.2
CDS GCA 90 bp ATATCAATCTTGTCCCCTAGGTCTCCAAGGATGTCCTGTAAGGTCTaGAACTCCGGAGAAGAGCTAGACTTGCTCAAAGGCTGTGAGGGT +
Preference number: 5 (lower is better)
Translates to: ISILSPRSPRMSCKV*NSGEELDLLKGCEG
Trigger: ACCCTCACAGCCTTTGAGCAAGTCTAGCTCTTCTCCGGAGTTGCAGACCTTACAGGACATCCTTGGAGACCTAGGGGACAAGATTGATAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATTCGGATGCGATTGTaGAGGCCGCATTCACCACTC +
Preference number: 5 (lower is better)
Translates to: LVSAAYLPSSYHLLSMSTIRMRL*RPHSPL
Trigger: GAGTGGTGAATGCGGCCTCAACAATCGCATCCGAAT...GGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCATTCGGATGCGATTGTaGAGGCCGCATTCACCACTC +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAIRMRL*RPHSPL
Trigger: GAGTGGTGAATGCGGCCTCAACAATCGCATCCGAAT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAATGTCCAGCAGACTGTaGAAGTGGTGGGTGTGGCAC +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATMSSRL*KWWVWH
Trigger: GTGCCACACCCACCACTTCAACAGTCTGCTGGACAT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAAGGACAGGAAGCGCCTaGATGATGATGTCGGGCATC +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGRTGSA*MMMSGI
Trigger: GATGCCCGACATCATCATCAAGGCGCTTCCTGTCCT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGGGACTGCAGTGAAATaGGAGAACACATATCGGGCC +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAGTAVK*ENTYRA
Trigger: GGCCCGATATGTGTTCTCCAATTTCACTGCAGTCCC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATGCAGGGGCATGTTGTaGATGTCTGAGGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGCRGML*MSEEKG
Trigger: CCCCTTCTCCTCAGACATCAACAACATGCCCCTGCA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGGCATTGGACAGCTCTaGCAGGGGCATGTTGTTGAT +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAGIGQL*QGHVVD
Trigger: ATCAACAACATGCCCCTGCAAGAGCTGTCCAATGCC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGTGTCCCGGTGCTCCTaGAAACGTTCAGCAGCCATA +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATVSRCS*KRSAAI
Trigger: TATGGCTGCTGAACGTTTCAAGGAGCACCGGGACAC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGTGTCCCGGTGCTCCTaGAAACGTTCAGCAGCCATA +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGVSRCS*KRSAAI
Trigger: TATGGCTGCTGAACGTTTCAAGGAGCACCGGGACAC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGCCGCAGCTCTGCTCTaGAAGTTATCCCTTTCTACC +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAAAALL*KLSLST
Trigger: GGTAGAAAGGGATAACTTCAAGAGCAGAGCTGCGGC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAAGAGCCATGCTCATTaGACAGGATGGCCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAKSHAH*TGWPAH
Trigger: GTGAGCTGGCCATCCTGTCAAATGAGCATGGCTCTT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCCACCTAAGTACACCTaGTCTGGTTGGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAPPKYT*SGWQSL
Trigger: CAAGGACTGCCAACCAGACAAGGTGTACTTAGGTGG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGCCACAAAGGACAGGTaGCGGTCAGACACAATCTTG +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAATKDR*RSDTIL
Trigger: CAAGATTGTGTCTGACCGCAACCTGTCCTTTGTGGC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CCTGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGCCTGTGAGGCCATATTaGCATGCAGGGCCATCTGTC +
Preference number: 5 (lower is better)
Translates to: PGFCPNPKQTRQSQIKKLPVRPY*HAGPSV
Trigger: GACAGATGGCCCTGCATGCAAATATGGCCTCACAGG...CAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACCTGTGAGGCCATATTaGCATGCAGGGCCATCTGTC +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGPVRPY*HAGPSV
Trigger: GACAGATGGCCCTGCATGCAAATATGGCCTCACAGG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGCCTGTGAGGCCATATTaGCATGCAGGGCCATCTGTC +
Preference number: 5 (lower is better)
Translates to: VRVQFISCRSTVRIATWLPVRPY*HAGPSV
Trigger: GACAGATGGCCCTGCATGCAAATATGGCCTCACAGG...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGCATCAGAGGCAAGCTaGGGTTGGAATAGTGCACCT +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAASEAS*GWNSAP
Trigger: AGGTGCACTATTCCAACCCAAGCTTGCCTCTGATGC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTTATTCAGGCCTTGTTaGGGGGCTCTGGCTATCCTC +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLALFRPC*GALAIL
Trigger: GAGGATAGCCAGAGCCCCCAAACAAGGCCTGAATAA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000226284.2
ENSMUST00000227745.2
CDS TCA 90 bp CACACCTGGGATTTGGCCTCGATGTTCCCAATCCCAACAGTATCTTaGACTTCTCCTTCAAGCCGGAATCTTTGCTTGTTGGTTTGGCCA +
Preference number: 5 (lower is better)
Translates to: HTWDLASMFPIPTVS*TSPSSRNLCLLVWP
Trigger: TGGCCAAACCAACAAGCAAAGATTCCGGCTTGAAGGAGAAGTTCAAGATACTGTTGGGATTGGGAACATCGAGGCCAAATCCCAGGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 90 bp ACAGCTGTTGAACTTGACCAGGTTGACAAGTACCAGAAGGAATTCTaGGGACAAGCCAACATCCATCCACTGCAGGACAAACTCTGCCAG +
Preference number: 5 (lower is better)
Translates to: TAVELDQVDKYQKEF*GQANIHPLQDKLCQ
Trigger: CTGGCAGAGTTTGTCCTGCAGTGGATGGATGTTGGCTTGTCCTCAGAATTCCTTCTGGTACTTGTCAACCTGGTCAAGTTCAACAGCTGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 90 bp ACTGCATGCTCCTCAAGCTTCTTAGTTTTTGCCACATCACAGATCTaGCCTATCATTCGGATGCGATTGTTGAGGCCGCATTCACCACTC +
Preference number: 5 (lower is better)
Translates to: TACSSSFLVFATSQI*PIIRMRLLRPHSPL
Trigger: GAGTGGTGAATGCGGCCTCAACAATCGCATCCGAATGATAGGGCAGATCTGTGATGTGGCAAAAACTAAGAAGCTTGAGGAGCATGCAGT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 90 bp AGAACCTCTCCATCAACAACTGCAAGTTCTGGATCCAGCCATCCTTaGCAGGGTGGATGGACTGGGCTCTGTAGGATATCAAGTTTAAGA +
Preference number: 5 (lower is better)
Translates to: RTSPSTTASSGSSHP*QGGWTGLCRISSLR
Trigger: TCTTAAACTTGATATCCTACAGAGCCCAGTCCATCCACCCTGCCAAGGATGGCTGGATCCAGAACTTGCAGTTGTTGATGGAGAGGTTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAATTCGGATGCGATTGTaGAGGCCGCATTCACCACTC +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGIRMRL*RPHSPL
Trigger: GAGTGGTGAATGCGGCCTCAACAATCGCATCCGAAT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGCGGTAGATAAGGCCTaGTTCCAGGCAGTACACCAT +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATAVDKA*FQAVHH
Trigger: ATGGTGTACTGCCTGGAACAAGGCCTTATCTACCGC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCGGTAGATAAGGCCTaGTTCCAGGCAGTACACCAT +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGAVDKA*FQAVHH
Trigger: ATGGTGTACTGCCTGGAACAAGGCCTTATCTACCGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CTCTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCAGGGACTGCAGTGAAATaGGAGAACACATATCGGGCC +
Preference number: 5 (lower is better)
Translates to: LLFLQHTCPLATICFLCPGTAVK*ENTYRA
Trigger: GGCCCGATATGTGTTCTCCAATTTCACTGCAGTCCC...TGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAGGGACTGCAGTGAAATaGGAGAACACATATCGGGCC +
Preference number: 5 (lower is better)
Translates to: FLQHTCPLATICFLCPPSGTAVK*ENTYRA
Trigger: GGCCCGATATGTGTTCTCCAATTTCACTGCAGTCCC...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGGACTGCAGTGAAATaGGAGAACACATATCGGGCC +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATGTAVK*ENTYRA
Trigger: GGCCCGATATGTGTTCTCCAATTTCACTGCAGTCCC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGTCACAGTGACAAGCTaGTTTCCAACCAGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAVTVTS*FPTSQV
Trigger: AACCTGGCTGGTTGGAAACAAGCTTGTCACTGTGAC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGACAAGACAAAGTCAAATAAAGAAGCTGTCTGACTGCTGTCTGTGCTGCTCTTGCAGGGGCATGTTGTaGATGTCTGAGGAGAAGGGG +
Preference number: 5 (lower is better)
Translates to: QTRQSQIKKLSDCCLCCSCRGML*MSEEKG
Trigger: CCCCTTCTCCTCAGACATCAACAACATGCCCCTGCA...AGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTGACTTTGTCTTGTCTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTCTTGCAGGGGCATGTaGTTGATGTCTGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLASCRGM*LMSEEK
Trigger: CTTCTCCTCAGACATCAACAACATGCCCCTGCAAGA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGCATTGGACAGCTCTaGCAGGGGCATGTTGTTGAT +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATGIGQL*QGHVVD
Trigger: ATCAACAACATGCCCCTGCAAGAGCTGTCCAATGCC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCCGCAGCTCTGCTCTaGAAGTTATCCCTTTCTACC +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGAAALL*KLSLST
Trigger: GGTAGAAAGGGATAACTTCAAGAGCAGAGCTGCGGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAACACAAAGCTAGGGTaGATGCCTGGCACCTTCTCA +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLANTKLG*MPGTFS
Trigger: TGAGAAGGTGCCAGGCATCAACCCTAGCTTTGTGTT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAAGAGCCATGCTCATTaGACAGGATGGCCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATKSHAH*TGWPAH
Trigger: GTGAGCTGGCCATCCTGTCAAATGAGCATGGCTCTT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGTACACCTTGTCTGGTaGGCAGTCCTTGAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAVHLVW*AVLELN
Trigger: ATTGAGCTCAAGGACTGCCAACCAGACAAGGTGTAC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCACCACCTAAGTACACCTaGTCTGGTTGGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: FLQHTCPLATICFLCPPSPPKYT*SGWQSL
Trigger: CAAGGACTGCCAACCAGACAAGGTGTACTTAGGTGG...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACCACCTAAGTACACCTaGTCTGGTTGGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGPPKYT*SGWQSL
Trigger: CAAGGACTGCCAACCAGACAAGGTGTACTTAGGTGG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACACCACCTAAGTACACCTaGTCTGGTTGGCAGTCCTTG +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATPPKYT*SGWQSL
Trigger: CAAGGACTGCCAACCAGACAAGGTGTACTTAGGTGG...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAAGGACAGGTaGCGGTCAGACACAATCTTG +
Preference number: 5 (lower is better)
Translates to: VRVQFISCRSTVRIATWLATKDR*RSDTIL
Trigger: CAAGATTGTGTCTGACCGCAACCTGTCCTTTGTGGC...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCCACAAAGGACAGGTaGCGGTCAGACACAATCTTG +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGATKDR*RSDTIL
Trigger: CAAGATTGTGTCTGACCGCAACCTGTCCTTTGTGGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCATCAGAGGCAAGCTaGGGTTGGAATAGTGCACCT +
Preference number: 5 (lower is better)
Translates to: VRVQFISCRSTVRIATWLASEAS*GWNSAP
Trigger: AGGTGCACTATTCCAACCCAAGCTTGCCTCTGATGC...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGCATCAGAGGCAAGCTaGGGTTGGAATAGTGCACCT +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATASEAS*GWNSAP
Trigger: AGGTGCACTATTCCAACCCAAGCTTGCCTCTGATGC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCATCAGAGGCAAGCTaGGGTTGGAATAGTGCACCT +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGASEAS*GWNSAP
Trigger: AGGTGCACTATTCCAACCCAAGCTTGCCTCTGATGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CACAGGGGACCTCTTGGGGACTGCAGTGAAATTGGAGAACACATATCGGGCCATGCTATCCTCAAACTTTaGGGTCTCTCATTAAGACTG +
Preference number: 5 (lower is better)
Translates to: HRGPLGDCSEIGEHISGHAILKL*GLSLRL
Trigger: CAGTCTTAATGAGAGACCCAAAAGTTTGAGGATAGC...ATGGCCCGATATGTGTTCTCCAATTTCACTGCAGTCCCCAAGAGGTCCCCTGTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000227658.2
CDS-3UTR CAA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCATTATTCAGGCCTTGTTaGGGGGCTCTGGCTATCCTC +
Preference number: 5 (lower is better)
Translates to: FLQHTCPLATICFLCPPSLFRPC*GALAIL
Trigger: GAGGATAGCCAGAGCCCCCAAACAAGGCCTGAATAA...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000226284.2
CDS TCA 90 bp AATTGGAGAACACATATCGGGCCATCATGTCCAGACATGTTTCTGTaGGCTCCAAGTGGAGATTCTTCAAGTTGTCATCAGCCTGGGCCA +
Preference number: 5 (lower is better)
Translates to: NWRTHIGPSCPDMFL*APSGDSSSCHQPGP
Trigger: TGGCCCAGGCTGATGACAACTTGAAGAATCTCCACTTGGAGCTCACAGAAACATGTCTGGACATGATGGCCCGATATGTGTTCTCCAATT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 90 bp CTTCCAAAGTGCCTCCACTGCATGCTCCTCAAGCTTCTTAGTTTTTaGCACATCACAGATCTGCCCTATCATTCGGATGCGATTGTTGAG +
Preference number: 5 (lower is better)
Translates to: LPKCLHCMLLKLLSF*HITDLPYHSDAIVE
Trigger: CTCAACAATCGCATCCGAATGATAGGGCAGATCTGTGATGTGGCAAAAACTAAGAAGCTTGAGGAGCATGCAGTGGAGGCACTTTGGAAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGTAATGTGCCTCCCATaGTCTGTGAGGGCCTTAAAA +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAVMCLP*SVRALK
Trigger: TTTTAAGGCCCTCACAGACAATGGGAGGCACATTAC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGTCACAGTGACAAGCTaGTTTCCAACCAGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: VRVQFISCRSTVRIATWLVTVTS*FPTSQV
Trigger: AACCTGGCTGGTTGGAAACAAGCTTGTCACTGTGAC...CAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGTCACAGTGACAAGCTaGTTTCCAACCAGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGVTVTS*FPTSQV
Trigger: AACCTGGCTGGTTGGAAACAAGCTTGTCACTGTGAC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGTCACAGTGACAAGCTaGTTTCCAACCAGCCAGGTT +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATVTVTS*FPTSQV
Trigger: AACCTGGCTGGTTGGAAACAAGCTTGTCACTGTGAC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACATCTTGCAGGGGCATGTaGTTGATGTCTGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATSCRGM*LMSEEK
Trigger: CTTCTCCTCAGACATCAACAACATGCCCCTGCAAGA...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAAACACAAAGCTAGGGTaGATGCCTGGCACCTTCTCA +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGNTKLG*MPGTFS
Trigger: TGAGAAGGTGCCAGGCATCAACCCTAGCTTTGTGTT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAACACAAAGCTAGGGTaGATGCCTGGCACCTTCTCA +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATNTKLG*MPGTFS
Trigger: TGAGAAGGTGCCAGGCATCAACCCTAGCTTTGTGTT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCCGTTCAAAGGACTCATaGGGCAATAGGATGGGCTTA +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLARSKDS*GNRMGL
Trigger: TAAGCCCATCCTATTGCCCAATGAGTCCTTTGAACG...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp TGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGTCAAGAGCCATGCTCATTaGACAGGATGGCCAGCTCAC +
Preference number: 5 (lower is better)
Translates to: WILPQPQTDKTKSNKEAVKSHAH*TGWPAH
Trigger: GTGAGCTGGCCATCCTGTCAAATGAGCATGGCTCTT...GACAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CCTGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGGTACACCTTGTCTGGTaGGCAGTCCTTGAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: PGFCPNPKQTRQSQIKKLVHLVW*AVLELN
Trigger: ATTGAGCTCAAGGACTGCCAACCAGACAAGGTGTAC...CAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCAGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGTACACCTTGTCTGGTaGGCAGTCCTTGAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGVHLVW*AVLELN
Trigger: ATTGAGCTCAAGGACTGCCAACCAGACAAGGTGTAC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp TGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGTCGCATCAGAGGCAAGCTaGGGTTGGAATAGTGCACCT +
Preference number: 5 (lower is better)
Translates to: WILPQPQTDKTKSNKEAVASEAS*GWNSAP
Trigger: AGGTGCACTATTCCAACCCAAGCTTGCCTCTGATGC...GACAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCAATCCCAACAGTATCTaGAACTTCTCCTTCAAGCCG +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLANPNSI*NFSFKP
Trigger: CGGCTTGAAGGAGAAGTTCAAGATACTGTTGGGATT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGTAATGTGCCTCCCATaGTCTGTGAGGGCCTTAAAA +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGVMCLP*SVRALK
Trigger: TTTTAAGGCCCTCACAGACAATGGGAGGCACATTAC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGTAATGTGCCTCCCATaGTCTGTGAGGGCCTTAAAA +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATVMCLP*SVRALK
Trigger: TTTTAAGGCCCTCACAGACAATGGGAGGCACATTAC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAAAAGACAGGAGGACATaGGAACGCAAACCCTTAGTG +
Preference number: 5 (lower is better)
Translates to: FLQHTCPLATICFLCPPSKDRRT*ERKPLV
Trigger: CACTAAGGGTTTGCGTTCCAATGTCCTCCTGTCTTT...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CTCTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCAAAAGACAGGAGGACATaGGAACGCAAACCCTTAGTG +
Preference number: 5 (lower is better)
Translates to: LLFLQHTCPLATICFLCPKDRRT*ERKPLV
Trigger: CACTAAGGGTTTGCGTTCCAATGTCCTCCTGTCTTT...TGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAAAAGACAGGAGGACATaGGAACGCAAACCCTTAGTG +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGKDRRT*ERKPLV
Trigger: CACTAAGGGTTTGCGTTCCAATGTCCTCCTGTCTTT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAAAAGACAGGAGGACATaGGAACGCAAACCCTTAGTG +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATKDRRT*ERKPLV
Trigger: CACTAAGGGTTTGCGTTCCAATGTCCTCCTGTCTTT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCATGGAGATTCTTCAAGTaGTCATCAGCCTGGGCCATA +
Preference number: 5 (lower is better)
Translates to: FLQHTCPLATICFLCPPSWRFFK*SSAWAI
Trigger: TATGGCCCAGGCTGATGACAACTTGAAGAATCTCCA...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGATGGAGATTCTTCAAGTaGTCATCAGCCTGGGCCATA +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGWRFFK*SSAWAI
Trigger: TATGGCCCAGGCTGATGACAACTTGAAGAATCTCCA...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGACAAGACAAAGTCAAATAAAGAAGCTGTCTGACTGCTGTCTGTGCTGCTCTTCTTGCAGGGGCATGTaGTTGATGTCTGAGGAGAAG +
Preference number: 5 (lower is better)
Translates to: QTRQSQIKKLSDCCLCCSSCRGM*LMSEEK
Trigger: CTTCTCCTCAGACATCAACAACATGCCCCTGCAAGA...AGAGCAGCACAGACAGCAGTCAGACAGCTTCTTTATTTGACTTTGTCTTGTCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGACGTTCAAAGGACTCATaGGGCAATAGGATGGGCTTA +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGRSKDS*GNRMGL
Trigger: TAAGCCCATCCTATTGCCCAATGAGTCCTTTGAACG...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAATAATGTACACCTTGTCTGGTaGGCAGTCCTTGAGCTCAAT +
Preference number: 5 (lower is better)
Translates to: AAYLPSSYHLLSMSTINNVHLVW*AVLELN
Trigger: ATTGAGCTCAAGGACTGCCAACCAGACAAGGTGTAC...ATTATTGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCATAGAAACAAAGTCATaGCCCAGGTGCCGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAIETKS*PRCRFL
Trigger: CAAGAAACGGCACCTGGGCAATGACTTTGTTTCTAT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTTAATGGTGCCCAGTTaGAAGTCCTCACCAGAATCA +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLALMVPS*KSSPES
Trigger: TGATTCTGGTGAGGACTTCAAACTGGGCACCATTAA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCATCACATGGACAAAGTaGAACTGGCCCTTAATGGTG +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLAITWTK*NWPLMV
Trigger: CACCATTAAGGGCCAGTTCAACTTTGTCCATGTGAT...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCTGCACAGCTCTCTTaGAATTCTTTCACAGGTGGA +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGAAQLS*NSFTGG
Trigger: TCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226284.2
ENSMUST00000227745.2
CDS GCA 90 bp TCTCAAGATTTCCGATGTGATGATAAACTCAGTCTGTTTGCCTTCTaGACACCTGGGATTTGGCCTCGATGTTCCCAATCCCAACAGTAT +
Preference number: 5 (lower is better)
Translates to: SQDFRCDDKLSLFAF*TPGIWPRCSQSQQY
Trigger: ATACTGTTGGGATTGGGAACATCGAGGCCAAATCCCAGGTGTGCAGAAGGCAAACAGACTGAGTTTATCATCACATCGGAAATCTTGAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 90 bp TGTGATGATAAACTCAGTCTGTTTGCCTTCTGCACACCTGGGATTTaGCCTCGATGTTCCCAATCCCAACAGTATCTTGAACTTCTCCTT +
Preference number: 5 (lower is better)
Translates to: CDDKLSLFAFCTPGI*PRCSQSQQYLELLL
Trigger: AAGGAGAAGTTCAAGATACTGTTGGGATTGGGAACATCGAGGCCAAATCCCAGGTGTGCAGAAGGCAAACAGACTGAGTTTATCATCACA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp TTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAAATCCCAACAGTATCTaGAACTTCTCCTTCAAGCCG +
Preference number: 5 (lower is better)
Translates to: FLQHTCPLATICFLCPPSNPNSI*NFSFKP
Trigger: CGGCTTGAAGGAGAAGTTCAAGATACTGTTGGGATT...TGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAAATCCCAACAGTATCTaGAACTTCTCCTTCAAGCCG +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGNPNSI*NFSFKP
Trigger: CGGCTTGAAGGAGAAGTTCAAGATACTGTTGGGATT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTTGAACTTGACCAGGTaGACAAGTACCAGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLALNLTR*TSTRRN
Trigger: ATTCCTTCTGGTACTTGTCAACCTGGTCAAGTTCAA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp TGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGTCTGGAGATTCTTCAAGTaGTCATCAGCCTGGGCCATA +
Preference number: 5 (lower is better)
Translates to: WILPQPQTDKTKSNKEAVWRFFK*SSAWAI
Trigger: TATGGCCCAGGCTGATGACAACTTGAAGAATCTCCA...GACAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp TTTGTATGTCAGTATTTTCTACTTGGGCTGAAAATGGGTCCATTGTTACCCAGGGGCATTGGACAGCTCTaGCAGGGGCATGTTGTTGAT +
Preference number: 5 (lower is better)
Translates to: FVCQYFLLGLKMGPLLPRGIGQL*QGHVVD
Trigger: ATCAACAACATGCCCCTGCAAGAGCTGTCCAATGCC...CCTGGGTAACAATGGACCCATTTTCAGCCCAAGTAGAAAATACTGACATACAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp TGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGTCCGTTCAAAGGACTCATaGGGCAATAGGATGGGCTTA +
Preference number: 5 (lower is better)
Translates to: WILPQPQTDKTKSNKEAVRSKDS*GNRMGL
Trigger: TAAGCCCATCCTATTGCCCAATGAGTCCTTTGAACG...GACAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAATAGAAACAAAGTCATaGCCCAGGTGCCGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGIETKS*PRCRFL
Trigger: CAAGAAACGGCACCTGGGCAATGACTTTGTTTCTAT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAATAGAAACAAAGTCATaGCCCAGGTGCCGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATIETKS*PRCRFL
Trigger: CAAGAAACGGCACCTGGGCAATGACTTTGTTTCTAT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACATTAATGGTGCCCAGTTaGAAGTCCTCACCAGAATCA +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATLMVPS*KSSPES
Trigger: TGATTCTGGTGAGGACTTCAAACTGGGCACCATTAA...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CTCTTGTTTCTGCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCAATCACATGGACAAAGTaGAACTGGCCCTTAATGGTG +
Preference number: 5 (lower is better)
Translates to: LLFLQHTCPLATICFLCPITWTK*NWPLMV
Trigger: CACCATTAAGGGCCAGTTCAACTTTGTCCATGTGAT...TGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGCAGAAACAAGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAATCACATGGACAAAGTaGAACTGGCCCTTAATGGTG +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATITWTK*NWPLMV
Trigger: CACCATTAAGGGCCAGTTCAACTTTGTCCATGTGAT...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAATCACATGGACAAAGTaGAACTGGCCCTTAATGGTG +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGITWTK*NWPLMV
Trigger: CACCATTAAGGGCCAGTTCAACTTTGTCCATGTGAT...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACATTGAACTTGACCAGGTaGACAAGTACCAGAAGGAAT +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATLNLTR*TSTRRN
Trigger: ATTCCTTCTGGTACTTGTCAACCTGGTCAAGTTCAA...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCTCCTTCCTATACTTCTaGATGAGTCTTGTTATGGAC +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLASFLYF*MSLVMD
Trigger: GTCCATAACAAGACTCATCAAGAAGTATAGGAAGGA...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGTCTGTATTCTGCTTTaGGGTCTCTCATTAAGACTG +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATVCILL*GLSLRL
Trigger: CAGTCTTAATGAGAGACCCAAAAGCAGAATACAGAC...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226398.2
CDS-3UTR CAA 90 bp GCAGCATACTTGCCCTCTAGCTACCATCTGCTTTCTATGTCCACCATCAATAATATAGAAACAAAGTCATaGCCCAGGTGCCGTTTCTTG +
Preference number: 5 (lower is better)
Translates to: AAYLPSSYHLLSMSTINNIETKS*PRCRFL
Trigger: CAAGAAACGGCACCTGGGCAATGACTTTGTTTCTAT...ATTATTGATGGTGGACATAGAAAGCAGATGGTAGCTAGAGGGCAAGTATGCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp TGGATTCTGCCCCAACCCCAAACAGACAAGACAAAGTCAAATAAAGAAGCTGTCTTAATGGTGCCCAGTTaGAAGTCCTCACCAGAATCA +
Preference number: 5 (lower is better)
Translates to: WILPQPQTDKTKSNKEAVLMVPS*KSSPES
Trigger: TGATTCTGGTGAGGACTTCAAACTGGGCACCATTAA...GACAGCTTCTTTATTTGACTTTGTCTTGTCTGTTTGGGGTTGGGGCAGAATCCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
CDS-3UTR CAA 90 bp CAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACAGGAGCTATCCTCAAACTTTaGGGTCTCTCATTAAGACTG +
Preference number: 5 (lower is better)
Translates to: QFISCRSTVRIATWLATGAILKL*GLSLRL
Trigger: CAGTCTTAATGAGAGACCCAAAAGTTTGAGGATAGC...TCCTGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226284.2
ENSMUST00000227745.2
CDS-3UTR CAA 90 bp CGTGTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCGATGTCTGTATTCTTTaGGGTCTCTCATTAAGACTG +
Preference number: 5 (lower is better)
Translates to: RVQFISCRSTVRIATWLADVCIL*GLSLRL
Trigger: CAGTCTTAATGAGAGACCCAAAAGAATACAGACATC...GGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCACACG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228412.2
CDS-3UTR CAA 90 bp GTGCAGTTTATTTCATGTAGGAGTACAGTCAGGATAGCTACATGGCTGGCCACATCCTTCCTATACTTCTaGATGAGTCTTGTTATGGAC +
Preference number: 5 (lower is better)
Translates to: VQFISCRSTVRIATWLATSFLYF*MSLVMD
Trigger: GTCCATAACAAGACTCATCAAGAAGTATAGGAAGGA...TGTGGCCAGCCATGTAGCTATCCTGACTGTACTCCTACATGAAATAAACTGCAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 90 bp CCTATACTTCTTGATGAGTCTTGTTATGGACAGAACAATCTCATATaGCACCACCTCATTGGGACAGGTCATAGCCTCATAAAAAGACGG +
Preference number: 5 (lower is better)
Translates to: PILLDESCYGQNNLI*HHLIGTGHSLIKRR
Trigger: CCGTCTTTTTATGAGGCTATGACCTGTCCCAATGAGGTGGTGTCATATGAGATTGTTCTGTCCATAACAAGACTCATCAAGAAGTATAGG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp GAGCGGACCCGGTCCCGGGCCCCACGGGACACCTGCTaGCCAGCCTGGGACTCCAGTTTGGCCGGTGCTTCC +
Preference number: 6 (lower is better)
Translates to: ERTRSRAPRDTC*PAWDSSLAGAS
Trigger: GGAAGCACCGGCCAAACTGGAGTCCCAGGCTGGGCAGCAGGTGTCCCGTGGGGCCCGGGACCGGGTCCGCTC
74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp AAGCTGGGCTCCTGCAGGGGGCTTCTCGGGCTTCGCTaGCACCGCCGTCTGTGGTCCCAGAGAAGCAGAGCC +
Preference number: 6 (lower is better)
Translates to: KLGSCRGLLGLR*HRRLWSQRSRA
Trigger: GGCTCTGCTTCTCTGGGACCACAGACGGCGGTGGCAGCGAAGCCCGAGAAGCCCCCTGCAGGAGCCCAGCTT
68% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp AGGACCGCGGTCTTCACGTCCTCCAGGGAGGCCGAGTaGATGGCCAGGTCCCTTTCTTCCAGCTCCGGGGGT +
Preference number: 6 (lower is better)
Translates to: RTAVFTSSREAE*MARSLSSSSGG
Trigger: ACCCCCGGAGCTGGAAGAAAGGGACCTGGCCATGCACTCGGCCTCCCTGGAGGACGTGAAGACCGCGGTCCT
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 72 bp GGAGCTGAAGTATCCAGGACACCAACTCGAAGGCCATaGCCCCCTGACATGGAGCGGACCCGGTCCCGGGCC +
Preference number: 6 (lower is better)
Translates to: GAEVSRTPTRRP*PPDMERTRSRA
Trigger: GGCCCGGGACCGGGTCCGCTCCATGTCAGGGGGCCATGGCCTTCGAGTTGGTGTCCTGGATACTTCAGCTCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp TCCCGGGCCCCACGGGACACCTGCTGCCCAGCCTGGGACTCCAGTTaGGCCGGTGCTTCCTTTGTCTGCCTCACATGTGTGCTAGGATCA +
Preference number: 6 (lower is better)
Translates to: SRAPRDTCCPAWDSS*AGASFVCLTCVLGS
Trigger: TGATCCTAGCACACATGTGAGGCAGACAAAGGAAGCACCGGCCAAACTGGAGTCCCAGGCTGGGCAGCAGGTGTCCCGTGGGGCCCGGGA
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp CTCACGACCCCATCCTTGTTGGGCAGGCCCAGTCGATaGAGCGAGTCAGCCCGCAGTAGCAGCAGGAAGTCA +
Preference number: 6 (lower is better)
Translates to: LTTPSLLGRPSR*SESARSSSRKS
Trigger: TGACTTCCTGCTGCTACTGCGGGCTGACTCGCTGCATCGACTGGGCCTGCCCAACAAGGATGGGGTCGTGAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp AGGACCATGGCTGAGTCTGCCCAGGAAACGCTCCTGTaGAGCTGTCCTTGGCAGCTGGGCTGGTACAGGGAG +
Preference number: 6 (lower is better)
Translates to: RTMAESAQETLL*SCPWQLGWYRE
Trigger: CTCCCTGTACCAGCCCAGCTGCCAAGGACAGCTGCACAGGAGCGTTTCCTGGGCAGACTCAGCCATGGTCCT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227745.2
CDS CAA 72 bp CCACGGGACACCTGCTGCCCAGCCTGGGACTCCAGTTaGGCCGGTGCTTCCTTTGTCTGCCTCACATGTGTG +
Preference number: 6 (lower is better)
Translates to: PRDTCCPAWDSS*AGASFVCLTCV
Trigger: CACACATGTGAGGCAGACAAAGGAAGCACCGGCCAAACTGGAGTCCCAGGCTGGGCAGCAGGTGTCCCGTGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp GGCTTGGCGGTGCCAGCCGCTGGCACTGACAATGACTaGTACAGGGCCGTGTCCCGGTGCTCCTTGAAACGT +
Preference number: 6 (lower is better)
Translates to: GLAVPAAGTDND*YRAVSRCSLKR
Trigger: ACGTTTCAAGGAGCACCGGGACACGGCCCTGTACAAGTCATTGTCAGTGCCAGCGGCTGGCACCGCCAAGCC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp AGAGTAGGAGGCTTGGCGGTGCCAGCCGCTGGCACTGACAATGACTaGTACAGGGCCGTGTCCCGGTGCTCCTTGAAACGTTCAGCAGCC +
Preference number: 6 (lower is better)
Translates to: RVGGLAVPAAGTDND*YRAVSRCSLKRSAA
Trigger: GGCTGCTGAACGTTTCAAGGAGCACCGGGACACGGCCCTGTACAAGTCATTGTCAGTGCCAGCGGCTGGCACCGCCAAGCCTCCTACTCT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 72 bp GCAGGGGGAGGTGAAGATGAGGACTTTGTAGCGCAGTaGCTCCGGCAGCCTGCTGAGCACCAGCTTCAGCAC +
Preference number: 6 (lower is better)
Translates to: AGGGEDEDFVAQ*LRQPAEHQLQH
Trigger: GTGCTGAAGCTGGTGCTCAGCAGGCTGCCGGAGTCACTGCGCTACAAAGTCCTCATCTTCACCTCCCCCTGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp ACAACAGGGAGCGCCCACACGACTATCTCCCCAGGCTaGCGCCACCACTCACATTTGCATGCAGGGCCATCT +
Preference number: 6 (lower is better)
Translates to: TTGSAHTTISPG*RHHSHLHAGPS
Trigger: AGATGGCCCTGCATGCAAATGTGAGTGGTGGCGGCAGCCTGGGGAGATAGTCGTGTGGGCGCTCCCTGTTGT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227804.2
CDS TCA 72 bp CAACTCCGGAGAAGAGCTAGACTTGCTCAAAGGCTGTaGGGGTTGGAAGGAGAGGTCCACGGCAGGCCGAGC +
Preference number: 6 (lower is better)
Translates to: QLRRRARLAQRL*GLEGEVHGRPS
Trigger: GCTCGGCCTGCCGTGGACCTCTCCTTCCAACCCTCACAGCCTTTGAGCAAGTCTAGCTCTTCTCCGGAGTTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp CGACTATCTCCCCAGGCTGCCGCCACCACTCACATTTaGATGCAGGGCCATCTTTCCTGCACTGCAGGGTCA +
Preference number: 6 (lower is better)
Translates to: RLSPQAAATTHI*MQGHLSCTAGS
Trigger: TGACCCTGCAGTGCAGGAAAGATGGCCCTGCATGCAAATGTGAGTGGTGGCGGCAGCCTGGGGAGATAGTCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227804.2
CDS CCA 72 bp CACAGCCAAGTGCAGGTCAGTTCTCGAGAAGCCTTCTaGGGTACCTCGGAGCCGCTCAAGGGTCTTTGGAGC +
Preference number: 6 (lower is better)
Translates to: HSQVQVSSREAF*GTSEPLKGLWS
Trigger: GCTCCAAAGACCCTTGAGCGGCTCCGAGGTACCCCAGAAGGCTTCTCGAGAACTGACCTGCACTTGGCTGTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 72 bp AGCCTCAGGGGCTTGAGCTGGGGCTTTGGTGTGGGCTaGAGGGTGCATCAGAGGCAAGCTTGGGTTGGAATA +
Preference number: 6 (lower is better)
Translates to: SLRGLSWGFGVG*RVHQRQAWVGI
Trigger: TATTCCAACCCAAGCTTGCCTCTGATGCACCCTCCAGCCCACACCAAAGCCCCAGCTCAAGCCCCTGAGGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS CAA 72 bp GCATGCAGGGCCATCTGTCGGGCCACAAAGGACAGGTaGCGGTCAGACACAATCTTGGCCACACTGGTGTCC +
Preference number: 6 (lower is better)
Translates to: ACRAICRATKDR*RSDTILATLVS
Trigger: GGACACCAGTGTGGCCAAGATTGTGTCTGACCGCAACCTGTCCTTTGTGGCCCGACAGATGGCCCTGCATGC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp GAGAGTGAGCGCGCCATCACCTTTTCAATGATGTCCAGCAGACTGTaGAAGTGGTGGGTGTGGCACCCCTCTGCCAGGTCCACCAGCAGC +
Preference number: 6 (lower is better)
Translates to: ESERAITFSMMSSRL*KWWVWHPSARSTSS
Trigger: GCTGCTGGTGGACCTGGCAGAGGGGTGCCACACCCACCACTTCAACAGTCTGCTGGACATCATTGAAAAGGTGATGGCGCGCTCACTCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp GGCCAAGGCTACCACGCACTGGCTGGCGCAGCGGTAGATAAGGCCTaGTTCCAGGCAGTACACCATCTCACGCTGTCTGGTCTTGTCCAA +
Preference number: 6 (lower is better)
Translates to: GQGYHALAGAAVDKA*FQAVHHLTLSGLVQ
Trigger: TTGGACAAGACCAGACAGCGTGAGATGGTGTACTGCCTGGAACAAGGCCTTATCTACCGCTGCGCCAGCCAGTGCGTGGTAGCCTTGGCC
59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp AGGACCATGGCTGAGTCTGTATTAGAGCGTGGGAGAGTAGGAGGCTaGGCGGTGCCAGCCGCTGGCACTGACAATGACTTGTACAGGGCC +
Preference number: 6 (lower is better)
Translates to: RTMAESVLERGRVGG*AVPAAGTDNDLYRA
Trigger: GGCCCTGTACAAGTCATTGTCAGTGCCAGCGGCTGGCACCGCCAAGCCTCCTACTCTCCCACGCTCTAATACAGACTCAGCCATGGTCCT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000228412.2
CDS CAA 90 bp GCCATCTGTCGGGCCACAAAGGACAGGTTGCGGTCAGACACAATCTaGGCCACACTGGTGTCCACGAGGCCTTCCATGTCTTTCCTGCAC +
Preference number: 6 (lower is better)
Translates to: AICRATKDRLRSDTI*ATLVSTRPSMSFLH
Trigger: GTGCAGGAAAGACATGGAAGGCCTCGTGGACACCAGTGTGGCCAAGATTGTGTCTGACCGCAACCTGTCCTTTGTGGCCCGACAGATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp GCCATATTTGCATGCAGGGCCATCTGTCGGGCCACAAAGGACAGGTaGCGGTCAGACACAATCTTGGCCACACTGGTGTCCACGAGGCCT +
Preference number: 6 (lower is better)
Translates to: AIFACRAICRATKDR*RSDTILATLVSTRP
Trigger: AGGCCTCGTGGACACCAGTGTGGCCAAGATTGTGTCTGACCGCAACCTGTCCTTTGTGGCCCGACAGATGGCCCTGCATGCAAATATGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp GAGGAGAAAGAAGCCACTGTATTAGAGCGTGGGAGAGTAGGAGGCTaGGCGGTGCCAGCCGCTGGCACTGACAATGACTTGTACAGGGCC +
Preference number: 6 (lower is better)
Translates to: EEKEATVLERGRVGG*AVPAAGTDNDLYRA
Trigger: GGCCCTGTACAAGTCATTGTCAGTGCCAGCGGCTGGCACCGCCAAGCCTCCTACTCTCCCACGCTCTAATACAGTGGCTTCTTTCTCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227745.2
CDS TCA 72 bp GATCACCCTGTCCCTGTACAATGGCCTTCAATAAGGTaGGAACTGCATGCCGGGCCTCTGGTGGCCGCTCTG +
Preference number: 6 (lower is better)
Translates to: DHPVPVQWPSIR*ELHAGPLVAAL
Trigger: CAGAGCGGCCACCAGAGGCCCGGCATGCAGTTCTCACCTTATTGAAGGCCATTGTACAGGGACAGGGTGATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 72 bp TCTGTATTCTGCTGCGGACCACATGTTCAGATACACTaGTGCTGCGGCACCGGAAGGCCTCGGCTGCACAGC +
Preference number: 6 (lower is better)
Translates to: SVFCCGPHVQIH*CCGTGRPRLHS
Trigger: GCTGTGCAGCCGAGGCCTTCCGGTGCCGCAGCATCAGTGTATCTGAACATGTGGTCCGCAGCAGAATACAGA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226284.2
ENSMUST00000227745.2
CDS GCA 72 bp TGGCAAGGAGATGGCAAACACGCTGGCATACTGCTCTaGAGCAAAGTTCCTGTAGAGGTGGGGCAGCCTGGC +
Preference number: 6 (lower is better)
Translates to: WQGDGKHAGILL*SKVPVEVGQPG
Trigger: GCCAGGCTGCCCCACCTCTACAGGAACTTTGCTGCAGAGCAGTATGCCAGCGTGTTTGCCATCTCCTTGCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp CATGCAGGGCCATCTGTCGGGCCACAAAGGACAGGTTaGGGTCAGACACAATCTTGGCCACACTGGTGTCCA +
Preference number: 6 (lower is better)
Translates to: HAGPSVGPQRTG*GQTQSWPHWCP
Trigger: TGGACACCAGTGTGGCCAAGATTGTGTCTGACCGCAACCTGTCCTTTGTGGCCCGACAGATGGCCCTGCATG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 72 bp TGTGGGCTGGAGGGTGCATCAGAGGCAAGCTTGGGTTaGAATAGTGCACCTCTTCACGGATCCTCTGGCGGA +
Preference number: 6 (lower is better)
Translates to: CGLEGASEASLG*NSAPLHGSSGG
Trigger: TCCGCCAGAGGATCCGTGAAGAGGTGCACTATTCCAACCCAAGCTTGCCTCTGATGCACCCTCCAGCCCACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS CAA 72 bp CGCGCCATCACCTTTTCAATGATGTCCAGCAGACTGTaGAAGTGGTGGGTGTGGCACCCCTCTGCCAGGTCC +
Preference number: 6 (lower is better)
Translates to: RAITFSMMSSRL*KWWVWHPSARS
Trigger: GGACCTGGCAGAGGGGTGCCACACCCACCACTTCAACAGTCTGCTGGACATCATTGAAAAGGTGATGGCGCG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp TACCACGCACTGGCTGGCGCAGCGGTAGATAAGGCCTaGTTCCAGGCAGTACACCATCTCACGCTGTCTGGT +
Preference number: 6 (lower is better)
Translates to: YHALAGAAVDKA*FQAVHHLTLSG
Trigger: ACCAGACAGCGTGAGATGGTGTACTGCCTGGAACAAGGCCTTATCTACCGCTGCGCCAGCCAGTGCGTGGTA
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp CGGGCCACAAAGGACAGGTTGCGGTCAGACACAATCTaGGCCACACTGGTGTCCACGAGGCCTTCCATGTCT +
Preference number: 6 (lower is better)
Translates to: RATKDRLRSDTI*ATLVSTRPSMS
Trigger: AGACATGGAAGGCCTCGTGGACACCAGTGTGGCCAAGATTGTGTCTGACCGCAACCTGTCCTTTGTGGCCCG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp CGTTCAGCAGCCATAAGGGCATTGGACAGCTCTTGCAGGGGCATGTaGTTGATGTCTGAGGAGAAGGGGCTGAGCGGGTTCTCCAAGCTC +
Preference number: 6 (lower is better)
Translates to: RSAAIRALDSSCRGM*LMSEEKGLSGFSKL
Trigger: GAGCTTGGAGAACCCGCTCAGCCCCTTCTCCTCAGACATCAACAACATGCCCCTGCAAGAGCTGTCCAATGCCCTTATGGCTGCTGAACG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp GCTGGCACTGACAATGACTTGTACAGGGCCGTGTCCCGGTGCTCCTaGAAACGTTCAGCAGCCATAAGGGCATTGGACAGCTCTTGCAGG +
Preference number: 6 (lower is better)
Translates to: AGTDNDLYRAVSRCS*KRSAAIRALDSSCR
Trigger: CCTGCAAGAGCTGTCCAATGCCCTTATGGCTGCTGAACGTTTCAAGGAGCACCGGGACACGGCCCTGTACAAGTCATTGTCAGTGCCAGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 72 bp GCAGTGGGGCATCTTCCATGTAGGATCTGTCCTCCATaGTGCGGCACATGTTGTAGATGGCGCTGTGGCCCA +
Preference number: 6 (lower is better)
Translates to: AVGHLPCRICPP*CGTCCRWRCGP
Trigger: TGGGCCACAGCGCCATCTACAACATGTGCCGCATCATGGAGGACAGATCCTACATGGAAGATGCCCCACTGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 72 bp CCTCCACAGTGGTCAGCAGGTCATGGACGATGGTCTTaGGTTCCGGGCTGTCCAGGTTCTGGAGTTGCTGAA +
Preference number: 6 (lower is better)
Translates to: PPQWSAGHGRWS*VPGCPGSGVAE
Trigger: TTCAGCAACTCCAGAACCTGGACAGCCCGGAACTCAAGACCATCGTCCATGACCTGCTGACCACTGTGGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 72 bp CTTTGTCTGCCTCACATGTGTGCTAGGATCAGAGCTTaGATCCGAGCCACCCTGCAGGTCCCCAGAGTCCAG +
Preference number: 6 (lower is better)
Translates to: LCLPHMCARIRA*IRATLQVPRVQ
Trigger: CTGGACTCTGGGGACCTGCAGGGTGGCTCGGATTCAAGCTCTGATCCTAGCACACATGTGAGGCAGACAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp AAGTCATTGCCCAGGTGCCGTTTCTTGTCACAGCGGTaGTTGTCCACATCCTTGGTGGGCATCAGGGTGGCA +
Preference number: 6 (lower is better)
Translates to: KSLPRCRFLSQR*LSTSLVGIRVA
Trigger: TGCCACCCTGATGCCCACCAAGGATGTGGACAAGCACCGCTGTGACAAGAAACGGCACCTGGGCAATGACTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS GCA 72 bp GATCGGCTGTGGTGTACCTGTGAGGCCATATTTGCATaGAGGGCCATCTGTCGGGCCACAAAGGACAGGTTG +
Preference number: 6 (lower is better)
Translates to: DRLWCTCEAIFA*RAICRATKDRL
Trigger: CAACCTGTCCTTTGTGGCCCGACAGATGGCCCTGCATGCAAATATGGCCTCACAGGTACACCACAGCCGATC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 72 bp GGGCCACAAAGGACAGGTTGCGGTCAGACACAATCTTaGCCACACTGGTGTCCACGAGGCCTTCCATGTCTT +
Preference number: 6 (lower is better)
Translates to: GPQRTGCGQTQS*PHWCPRGLPCL
Trigger: AAGACATGGAAGGCCTCGTGGACACCAGTGTGGCCAAGATTGTGTCTGACCGCAACCTGTCCTTTGTGGCCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 72 bp GGAGTCTTGCGATCCACTTGGAGGGATAGATGTCAGTaGGGTTGGATCGGCTGTGGTGTACCTGTGAGGCCA +
Preference number: 6 (lower is better)
Translates to: GVLRSTWRDRCQ*GWIGCGVPVRP
Trigger: TGGCCTCACAGGTACACCACAGCCGATCCAACCCCACTGACATCTATCCCTCCAAGTGGATCGCAAGACTCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS CAA 72 bp TCATTGCCCAGGTGCCGTTTCTTGTCACAGCGGTGCTaGTCCACATCCTTGGTGGGCATCAGGGTGGCAATG +
Preference number: 6 (lower is better)
Translates to: SLPRCRFLSQRC*STSLVGIRVAM
Trigger: CATTGCCACCCTGATGCCCACCAAGGATGTGGACAAGCACCGCTGTGACAAGAAACGGCACCTGGGCAATGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS CAA 90 bp AACTGCCTGTTGATCAGCAGCACGAAGGACAGAACATCCAACACCTaGATGCGCACGGCGCTGCGGCACTCATTCCTGAAGAACCTCTCC +
Preference number: 6 (lower is better)
Translates to: NCLLISSTKDRTSNT*MRTALRHSFLKNLS
Trigger: GGAGAGGTTCTTCAGGAATGAGTGCCGCAGCGCCGTGCGCATCAAGGTGTTGGATGTTCTGTCCTTCGTGCTGCTGATCAACAGGCAGTT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp ACACTTGTTGTCACAGTGACAAGCTTGTTTCCAACCAGCCAGGTTTaGGTCCTACCCCCTGCCAGGAGGAACTCTCCCACAGGGGACCTC +
Preference number: 6 (lower is better)
Translates to: TLVVTVTSLFPTSQV*VLPPARRNSPTGDL
Trigger: GAGGTCCCCTGTGGGAGAGTTCCTCCTGGCAGGGGGTAGGACCAAAACCTGGCTGGTTGGAAACAAGCTTGTCACTGTGACAACAAGTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp AGCGACCGTGTACCAGTTCCCACACTTGTTGTCACAGTGACAAGCTaGTTTCCAACCAGCCAGGTTTTGGTCCTACCCCCTGCCAGGAGG +
Preference number: 6 (lower is better)
Translates to: SDRVPVPTLVVTVTS*FPTSQVLVLPPARR
Trigger: CCTCCTGGCAGGGGGTAGGACCAAAACCTGGCTGGTTGGAAACAAGCTTGTCACTGTGACAACAAGTGTGGGAACTGGTACACGGTCGCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp GCCGTGTCCCGGTGCTCCTTGAAACGTTCAGCAGCCATAAGGGCATaGGACAGCTCTTGCAGGGGCATGTTGTTGATGTCTGAGGAGAAG +
Preference number: 6 (lower is better)
Translates to: AVSRCSLKRSAAIRA*DSSCRGMLLMSEEK
Trigger: CTTCTCCTCAGACATCAACAACATGCCCCTGCAAGAGCTGTCCAATGCCCTTATGGCTGCTGAACGTTTCAAGGAGCACCGGGACACGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 72 bp TATCCAGTTCCATGCAGTCACAGAGGCAGTAAGGGCTaGATCTCACGACCCCATCCTTGTTGGGCAGGCCCA +
Preference number: 6 (lower is better)
Translates to: YPVPCSHRGSKG*ISRPHPCWAGP
Trigger: TGGGCCTGCCCAACAAGGATGGGGTCGTGAGATTCAGCCCTTACTGCCTCTGTGACTGCATGGAACTGGATA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp GTTCTTGAGAGAGTAGAGCCGGTGAGCTCCCCAGAGTaGCATCCCTACAAAGAACACAGCTCCTCTCAGCAG +
Preference number: 6 (lower is better)
Translates to: VLERVEPVSSPE*HPYKEHSSSQQ
Trigger: CTGCTGAGAGGAGCTGTGTTCTTTGTAGGGATGGCACTCTGGGGAGCTCACCGGCTCTACTCTCTCAAGAAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp GCCTGGGACTCCAGTTTGGCCGGTGCTTCCTTTGTCTaGCTCACATGTGTGCTAGGATCAGAGCTTGAATCC +
Preference number: 6 (lower is better)
Translates to: AWDSSLAGASFV*LTCVLGSELES
Trigger: GGATTCAAGCTCTGATCCTAGCACACATGTGAGGCAGACAAAGGAAGCACCGGCCAAACTGGAGTCCCAGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp GGCACTGACAATGACTTGTACAGGGCCGTGTCCCGGTaGTCCTTGAAACGTTCAGCAGCCATAAGGGCATTG +
Preference number: 6 (lower is better)
Translates to: GTDNDLYRAVSR*SLKRSAAIRAL
Trigger: CAATGCCCTTATGGCTGCTGAACGTTTCAAGGAGCACCGGGACACGGCCCTGTACAAGTCATTGTCAGTGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp GATCCTCTGGCGGAGACGCTTAATGTGGCGGAGTCTTaGGATCCACTTGGAGGGATAGATGTCAGTGGGGTT +
Preference number: 6 (lower is better)
Translates to: DPLAETLNVAES*DPLGGIDVSGV
Trigger: AACCCCACTGACATCTATCCCTCCAAGTGGATCGCAAGACTCCGCCACATTAAGCGTCTCCGCCAGAGGATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS CCA 72 bp ATCACCTTTTCAATGATGTCCAGCAGACTGTTGAAGTaGTGGGTGTGGCACCCCTCTGCCAGGTCCACCAGC +
Preference number: 6 (lower is better)
Translates to: ITFSMMSSRLLK*WVWHPSARSTS
Trigger: GCTGGTGGACCTGGCAGAGGGGTGCCACACCCACCACTTCAACAGTCTGCTGGACATCATTGAAAAGGTGAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 72 bp AGGACAGGTTGCGGTCAGACACAATCTTGGCCACACTaGTGTCCACGAGGCCTTCCATGTCTTTCCTGCACT +
Preference number: 6 (lower is better)
Translates to: RTGCGQTQSWPH*CPRGLPCLSCT
Trigger: AGTGCAGGAAAGACATGGAAGGCCTCGTGGACACCAGTGTGGCCAAGATTGTGTCTGACCGCAACCTGTCCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 72 bp TTTGGTGTGGGCTGGAGGGTGCATCAGAGGCAAGCTTaGGTTGGAATAGTGCACCTCTTCACGGATCCTCTG +
Preference number: 6 (lower is better)
Translates to: FGVGWRVHQRQA*VGIVHLFTDPL
Trigger: CAGAGGATCCGTGAAGAGGTGCACTATTCCAACCCAAGCTTGCCTCTGATGCACCCTCCAGCCCACACCAAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS CCA 72 bp TTGCGATCCACTTGGAGGGATAGATGTCAGTGGGGTTaGATCGGCTGTGGTGTACCTGTGAGGCCATCTGGA +
Preference number: 6 (lower is better)
Translates to: LRSTWRDRCQWG*IGCGVPVRPSG
Trigger: TCCAGATGGCCTCACAGGTACACCACAGCCGATCCAACCCCACTGACATCTATCCCTCCAAGTGGATCGCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000227804.2
CDS CAA 72 bp TTGATCAGCAGCACGAAGGACAGAACATCCAACACCTaGATGCGCACGGCGCTGCGGCACTCATTCCTGAAG +
Preference number: 6 (lower is better)
Translates to: LISSTKDRTSNT*MRTALRHSFLK
Trigger: CTTCAGGAATGAGTGCCGCAGCGCCGTGCGCATCAAGGTGTTGGATGTTCTGTCCTTCGTGCTGCTGATCAA
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp GTCACAGTGACAAGCTTGTTTCCAACCAGCCAGGTTTaGGTCCTACCCCCTGCCAGGAGGAACTCTCCCACA +
Preference number: 6 (lower is better)
Translates to: VTVTSLFPTSQV*VLPPARRNSPT
Trigger: TGTGGGAGAGTTCCTCCTGGCAGGGGGTAGGACCAAAACCTGGCTGGTTGGAAACAAGCTTGTCACTGTGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp GACAATGACTTGTACAGGGCCGTGTCCCGGTGCTCCTaGAAACGTTCAGCAGCCATAAGGGCATTGGACAGC +
Preference number: 6 (lower is better)
Translates to: DNDLYRAVSRCS*KRSAAIRALDS
Trigger: GCTGTCCAATGCCCTTATGGCTGCTGAACGTTTCAAGGAGCACCGGGACACGGCCCTGTACAAGTCATTGTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp GGCACCTTCTCAGCACTGGAGGCCGCAGCTCTGCTCTaGAAGTTATCCCTTTCTACCCTCTTTCCCCTTCGT +
Preference number: 6 (lower is better)
Translates to: GTFSALEAAALL*KLSLSTLFPLR
Trigger: ACGAAGGGGAAAGAGGGTAGAAAGGGATAACTTCAAGAGCAGAGCTGCGGCCTCCAGTGCTGAGAAGGTGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp CTTTGGTGTGGGCTGGAGGGTGCATCAGAGGCAAGCTaGGGTTGGAATAGTGCACCTCTTCACGGATCCTCT +
Preference number: 6 (lower is better)
Translates to: LWCGLEGASEAS*GWNSAPLHGSS
Trigger: AGAGGATCCGTGAAGAGGTGCACTATTCCAACCCAAGCTTGCCTCTGATGCACCCTCCAGCCCACACCAAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS CAA 72 bp CTGCGGCACCGGAAGGCCTCGGCTGCACAGCTCTCTTaGAATTCTTTCACAGGTGGAGAGTTATTCAGGCCT +
Preference number: 6 (lower is better)
Translates to: LRHRKASAAQLS*NSFTGGELFRP
Trigger: AGGCCTGAATAACTCTCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAGCCGAGGCCTTCCGGTGCCGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226284.2
ENSMUST00000227745.2
CDS CAA 90 bp TGGGACCGGACCTTAGCCTCAGGACTCAGCCGTCCAATATCAATCTaGTCCCCTAGGTCTCCAAGGATGTCCTGTAAGGTCTGCAACTCC +
Preference number: 6 (lower is better)
Translates to: WDRTLASGLSRPISI*SPRSPRMSCKVCNS
Trigger: GGAGTTGCAGACCTTACAGGACATCCTTGGAGACCTAGGGGACAAGATTGATATTGGACGGCTGAGTCCTGAGGCTAAGGTCCGGTCCCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp TTGCCCAGGTGCCGTTTCTTGTCACAGCGGTGCTTGTCCACATCCTaGGTGGGCATCAGGGTGGCAATGTGGAAAACAGCTTGCATGATG +
Preference number: 6 (lower is better)
Translates to: LPRCRFLSQRCLSTS*VGIRVAMWKTACMM
Trigger: CATCATGCAAGCTGTTTTCCACATTGCCACCCTGATGCCCACCAAGGATGTGGACAAGCACCGCTGTGACAAGAAACGGCACCTGGGCAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS CAA 90 bp ACACTGATGCTGCGGCACCGGAAGGCCTCGGCTGCACAGCTCTCTTaGAATTCTTTCACAGGTGGAGAGTTATTCAGGCCTTGTTTGGGG +
Preference number: 6 (lower is better)
Translates to: TLMLRHRKASAAQLS*NSFTGGELFRPCLG
Trigger: CCCCAAACAAGGCCTGAATAACTCTCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAGCCGAGGCCTTCCGGTGCCGCAGCATCAGTGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226284.2
ENSMUST00000227745.2
CDS TCA 72 bp AGTCTCTCCTGGACTTCCCTCCTCAAGGACCATGGCTaGGTCTGTATTAGAGCGTGGGAGAGTAGGAGGCTT +
Preference number: 6 (lower is better)
Translates to: SLSWTSLLKDHG*VCIRAWESRRL
Trigger: AAGCCTCCTACTCTCCCACGCTCTAATACAGACTCAGCCATGGTCCTTGAGGAGGGAAGTCCAGGAGAGACT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000228412.2
CDS TCA 72 bp CAGAAACTCCGTGTACCTGTAAGAGCCATGCTCATTTaGCAGGATGGCCAGCTCACTGCTGCTCTGGCCTTC +
Preference number: 6 (lower is better)
Translates to: QKLRVPVRAMLI*QDGQLTAALAF
Trigger: GAAGGCCAGAGCAGCAGTGAGCTGGCCATCCTGTCAAATGAGCATGGCTCTTACAGGTACACGGAGTTTCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 72 bp TGCGGCACCGGAAGGCCTCGGCTGCACAGCTCTCTTTaGATTCTTTCACAGGTGGAGAGTTATTCAGGCCTT +
Preference number: 6 (lower is better)
Translates to: CGTGRPRLHSSL*ILSQVESYSGL
Trigger: AAGGCCTGAATAACTCTCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAGCCGAGGCCTTCCGGTGCCGCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226284.2
ENSMUST00000227745.2
CDS GCA 72 bp CAGGAGGAACTCTCCCACAGGGGACCTCTTGGGGACTaGAGTGAAATTGGAGAACACATATCGGGCCATCAT +
Preference number: 6 (lower is better)
Translates to: QEELSHRGPLGD*SEIGEHISGHH
Trigger: ATGATGGCCCGATATGTGTTCTCCAATTTCACTGCAGTCCCCAAGAGGTCCCCTGTGGGAGAGTTCCTCCTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp AGATACACTGATGCTGCGGCACCGGAAGGCCTCGGCTaGACAGCTCTCTTTGAATTCTTTCACAGGTGGAGA +
Preference number: 6 (lower is better)
Translates to: RYTDAAAPEGLG*TALFEFFHRWR
Trigger: TCTCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAGCCGAGGCCTTCCGGTGCCGCAGCATCAGTGTATCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000226284.2
ENSMUST00000227745.2
CDS CCA 72 bp AGCTCCAAGTGGAGATTCTTCAAGTTGTCATCAGCCTaGGCCATAGAGTTCTCATCCGCAGACCCCAGGCTG +
Preference number: 6 (lower is better)
Translates to: SSKWRFFKLSSA*AIEFSSADPRL
Trigger: CAGCCTGGGGTCTGCGGATGAGAACTCTATGGCCCAGGCTGATGACAACTTGAAGAATCTCCACTTGGAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 72 bp GCCGTTTCTTGTCACAGCGGTGCTTGTCCACATCCTTaGTGGGCATCAGGGTGGCAATGTGGAAAACAGCTT +
Preference number: 6 (lower is better)
Translates to: AVSCHSGACPHP*WASGWQCGKQL
Trigger: AAGCTGTTTTCCACATTGCCACCCTGATGCCCACCAAGGATGTGGACAAGCACCGCTGTGACAAGAAACGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS CAA 72 bp TGCCGTTTCTTGTCACAGCGGTGCTTGTCCACATCCTaGGTGGGCATCAGGGTGGCAATGTGGAAAACAGCT +
Preference number: 6 (lower is better)
Translates to: CRFLSQRCLSTS*VGIRVAMWKTA
Trigger: AGCTGTTTTCCACATTGCCACCCTGATGCCCACCAAGGATGTGGACAAGCACCGCTGTGACAAGAAACGGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS CAA 72 bp CCCAGGCTGGCGCTCGTAAGGGATGTCTGTATTCTTTaGGGTCTCTCATTAAGACTGGTGCTCCGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: PRLALVRDVCIL*GLSLRLVLRAL
Trigger: CAGAGCACGGAGCACCAGTCTTAATGAGAGACCCAAAAGAATACAGACATCCCTTACGAGCGCCAGCCTGGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000228412.2
CDS CAA 90 bp AACTGTCCATCCTCGCCACATACATCCAGTCCACCTAAGTACACCTaGTCTGGTTGGCAGTCCTTGAGCTCAATAAGCCGACCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: NCPSSPHTSSPPKYT*SGWQSLSSISRPRP
Trigger: AGGCCTGGGTCGGCTTATTGAGCTCAAGGACTGCCAACCAGACAAGGTGTACTTAGGTGGACTGGATGTATGTGGCGAGGATGGACAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS TCA 72 bp GCGACCGTGTACCAGTTCCCACACTTGTTGTCACAGTaGCAAGCTTGTTTCCAACCAGCCAGGTTTTGGTCC +
Preference number: 6 (lower is better)
Translates to: ATVYQFPHLLSQ*QACFQPARFWS
Trigger: GGACCAAAACCTGGCTGGTTGGAAACAAGCTTGTCACTGTGACAACAAGTGTGGGAACTGGTACACGGTCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp AAACGTTCAGCAGCCATAAGGGCATTGGACAGCTCTTaGAGGGGCATGTTGTTGATGTCTGAGGAGAAGGGG +
Preference number: 6 (lower is better)
Translates to: KRSAAIRALDSS*RGMLLMSEEKG
Trigger: CCCCTTCTCCTCAGACATCAACAACATGCCCCTGCAAGAGCTGTCCAATGCCCTTATGGCTGCTGAACGTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp TTGTCCCCTAGGTCTCCAAGGATGTCCTGTAAGGTCTaGAACTCCGGAGAAGAGCTAGACTTGCTCAAAGGC +
Preference number: 6 (lower is better)
Translates to: LSPRSPRMSCKV*NSGEELDLLKG
Trigger: GCCTTTGAGCAAGTCTAGCTCTTCTCCGGAGTTGCAGACCTTACAGGACATCCTTGGAGACCTAGGGGACAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 72 bp CCATCAACAACTGCAAGTTCTGGATCCAGCCATCCTTaGCAGGGTGGATGGACTGGGCTCTGTAGGATATCA +
Preference number: 6 (lower is better)
Translates to: PSTTASSGSSHP*QGGWTGLCRIS
Trigger: TGATATCCTACAGAGCCCAGTCCATCCACCCTGCCAAGGATGGCTGGATCCAGAACTTGCAGTTGTTGATGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 72 bp AGGGGTTGGTGTATGGCAAGGAGATGGCAAACACGCTaGCATACTGCTCTGCAGCAAAGTTCCTGTAGAGGT +
Preference number: 6 (lower is better)
Translates to: RGWCMARRWQTR*HTALQQSSCRG
Trigger: ACCTCTACAGGAACTTTGCTGCAGAGCAGTATGCCAGCGTGTTTGCCATCTCCTTGCCATACACCAACCCCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 72 bp CATACATCCAGTCCACCTAAGTACACCTTGTCTGGTTaGCAGTCCTTGAGCTCAATAAGCCGACCCAGGCCT +
Preference number: 6 (lower is better)
Translates to: HTSSPPKYTLSG*QSLSSISRPRP
Trigger: AGGCCTGGGTCGGCTTATTGAGCTCAAGGACTGCCAACCAGACAAGGTGTACTTAGGTGGACTGGATGTATG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS CCA 72 bp TTGCGATCCACTTGGAGGGATAGATGTCAGTGGGGTTaGATCGGCTGTGGTGTACCTGTGAGGCCATATTTG +
Preference number: 6 (lower is better)
Translates to: LRSTWRDRCQWG*IGCGVPVRPYL
Trigger: CAAATATGGCCTCACAGGTACACCACAGCCGATCCAACCCCACTGACATCTATCCCTCCAAGTGGATCGCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp CGGTGCTCCTTGAAACGTTCAGCAGCCATAAGGGCATaGGACAGCTCTTGCAGGGGCATGTTGTTGATGTCT +
Preference number: 6 (lower is better)
Translates to: RCSLKRSAAIRA*DSSCRGMLLMS
Trigger: AGACATCAACAACATGCCCCTGCAAGAGCTGTCCAATGCCCTTATGGCTGCTGAACGTTTCAAGGAGCACCG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp AGTCCACCTAAGTACACCTTGTCTGGTTGGCAGTCCTaGAGCTCAATAAGCCGACCCAGGCCTGTCAGAAAC +
Preference number: 6 (lower is better)
Translates to: SPPKYTLSGWQS*SSISRPRPVRN
Trigger: GTTTCTGACAGGCCTGGGTCGGCTTATTGAGCTCAAGGACTGCCAACCAGACAAGGTGTACTTAGGTGGACT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp AGGCCTTGTTTGGGGGCTCTGGCTATCCTCAAACTTTaGGGTCTCTCATTAAGACTGGTGCTCCGTGCTCTG +
Preference number: 6 (lower is better)
Translates to: RPCLGALAILKL*GLSLRLVLRAL
Trigger: CAGAGCACGGAGCACCAGTCTTAATGAGAGACCCAAAAGTTTGAGGATAGCCAGAGCCCCCAAACAAGGCCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226284.2
ENSMUST00000227658.2
ENSMUST00000227745.2
CDS CAA 90 bp AGGAGGAACTCTCCCACAGGGGACCTCTTGGGGACTGCAGTGAAATaGGAGAACACATATCGGGCCATCATGTCCAGACATGTTTCTGTG +
Preference number: 6 (lower is better)
Translates to: RRNSPTGDLLGTAVK*ENTYRAIMSRHVSV
Trigger: CACAGAAACATGTCTGGACATGATGGCCCGATATGTGTTCTCCAATTTCACTGCAGTCCCCAAGAGGTCCCCTGTGGGAGAGTTCCTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp CATACATCCAGTCCACCTAAGTACACCTTGTCTGGTTGGCAGTCCTaGAGCTCAATAAGCCGACCCAGGCCTGTCAGAAACTCCGTGTAC +
Preference number: 6 (lower is better)
Translates to: HTSSPPKYTLSGWQS*SSISRPRPVRNSVY
Trigger: GTACACGGAGTTTCTGACAGGCCTGGGTCGGCTTATTGAGCTCAAGGACTGCCAACCAGACAAGGTGTACTTAGGTGGACTGGATGTATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp GAAACAAAGTCATTGCCCAGGTGCCGTTTCTTGTCACAGCGGTGCTaGTCCACATCCTTGGTGGGCATCAGGGTGGCAATGTGGAAAACA +
Preference number: 6 (lower is better)
Translates to: ETKSLPRCRFLSQRC*STSLVGIRVAMWKT
Trigger: TGTTTTCCACATTGCCACCCTGATGCCCACCAAGGATGTGGACAAGCACCGCTGTGACAAGAAACGGCACCTGGGCAATGACTTTGTTTC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000227804.2
ENSMUST00000228412.2
CDS CAA 90 bp GGCCATAGAGTTCTCATCCGGAAGGCCTCGGCTGCACAGCTCTCTTaGAATTCTTTCACAGGTGGAGAGTTATTCAGGCCTTGTTTGGGG +
Preference number: 6 (lower is better)
Translates to: GHRVLIRKASAAQLS*NSFTGGELFRPCLG
Trigger: CCCCAAACAAGGCCTGAATAACTCTCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAGCCGAGGCCTTCCGGATGAGAACTCTATGGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227658.2
CDS CAA 90 bp ATGTCCAGACATGTTTCTGTGAGCTCCAAGTGGAGATTCTTCAAGTaGTCATCAGCCTGGGCCATAGAGTTCTCATCCGCAGACCCCAGG +
Preference number: 6 (lower is better)
Translates to: MSRHVSVSSKWRFFK*SSAWAIEFSSADPR
Trigger: CCTGGGGTCTGCGGATGAGAACTCTATGGCCCAGGCTGATGACAACTTGAAGAATCTCCACTTGGAGCTCACAGAAACATGTCTGGACAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 72 bp AGTCGGCACCTGATGAACCACATGGCTATGACGTGGTaGGCCAGACACACAATGTACTGGTTGAACTTGGAG +
Preference number: 6 (lower is better)
Translates to: SRHLMNHMAMTW*ARHTMYWLNLE
Trigger: CTCCAAGTTCAACCAGTACATTGTGTGTCTGGCTCACCACGTCATAGCCATGTGGTTCATCAGGTGCCGACT
51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 72 bp CTTGAAGTTATCCCTTTCTACCCTCTTTCCCCTTCGTaGTGGAGCGGAATCAGAGATGGTATAGCCTCGGGG +
Preference number: 6 (lower is better)
Translates to: LEVIPFYPLSPS*WSGIRDGIASG
Trigger: CCCCGAGGCTATACCATCTCTGATTCCGCTCCATCACGAAGGGGAAAGAGGGTAGAAAGGGATAACTTCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp GATATTAATGCTGTTAGCACGGGAACCACAGCCAAGTaGAGGTCAGTTCTCGAGAAGCCTTCTGGGGTACCT +
Preference number: 6 (lower is better)
Translates to: DINAVSTGTTAK*RSVLEKPSGVP
Trigger: AGGTACCCCAGAAGGCTTCTCGAGAACTGACCTGCACTTGGCTGTGGTTCCCGTGCTAACAGCATTAATATC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 72 bp TGCCATCCCTACAAAGAACACAGCTCCTCTCAGCAGTaGGGCATCTTCCATGTAGGATCTGTCCTCCATGAT +
Preference number: 6 (lower is better)
Translates to: CHPYKEHSSSQQ*GIFHVGSVLHD
Trigger: ATCATGGAGGACAGATCCTACATGGAAGATGCCCCACTGCTGAGAGGAGCTGTGTTCTTTGTAGGGATGGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp GCCACATCACAGATCTGCCCTATCATTCGGATGCGATaGTTGAGGCCGCATTCACCACTCAGTTCTCTCAAG +
Preference number: 6 (lower is better)
Translates to: ATSQICPIIRMR*LRPHSPLSSLK
Trigger: CTTGAGAGAACTGAGTGGTGAATGCGGCCTCAACAATCGCATCCGAATGATAGGGCAGATCTGTGATGTGGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp ACCTTAGCCTCAGGACTCAGCCGTCCAATATCAATCTaGTCCCCTAGGTCTCCAAGGATGTCCTGTAAGGTC +
Preference number: 6 (lower is better)
Translates to: TLASGLSRPISI*SPRSPRMSCKV
Trigger: GACCTTACAGGACATCCTTGGAGACCTAGGGGACAAGATTGATATTGGACGGCTGAGTCCTGAGGCTAAGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp GTTCTCATCCGGAAGGCCTCGGCTGCACAGCTCTCTTaGAATTCTTTCACAGGTGGAGAGTTATTCAGGCCT +
Preference number: 6 (lower is better)
Translates to: VLIRKASAAQLS*NSFTGGELFRP
Trigger: AGGCCTGAATAACTCTCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAGCCGAGGCCTTCCGGATGAGAAC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227658.2
CDS CAA 90 bp GCACACCTGGGATTTGGCCTCGATGTTCCCAATCCCAACAGTATCTaGAACTTCTCCTTCAAGCCGGAATCTTTGCTTGTTGGTTTGGCC +
Preference number: 6 (lower is better)
Translates to: AHLGFGLDVPNPNSI*NFSFKPESLLVGLA
Trigger: GGCCAAACCAACAAGCAAAGATTCCGGCTTGAAGGAGAAGTTCAAGATACTGTTGGGATTGGGAACATCGAGGCCAAATCCCAGGTGTGC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp GAGTTATTCAGGCCTTGTTTGGGGGCTCTGGCTATCCTCAAACTTTaGGGTCTCTCATTAAGACTGGTGCTCCGTGCTCTGAAACTGTCC +
Preference number: 6 (lower is better)
Translates to: ELFRPCLGALAILKL*GLSLRLVLRALKLS
Trigger: GGACAGTTTCAGAGCACGGAGCACCAGTCTTAATGAGAGACCCAAAAGTTTGAGGATAGCCAGAGCCCCCAAACAAGGCCTGAATAACTC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000226284.2
ENSMUST00000227658.2
ENSMUST00000227745.2
CDS TCA 72 bp TTCTCATCCGGAAGGCCTCGGCTGCACAGCTCTCTTTaGATTCTTTCACAGGTGGAGAGTTATTCAGGCCTT +
Preference number: 6 (lower is better)
Translates to: FSSGRPRLHSSL*ILSQVESYSGL
Trigger: AAGGCCTGAATAACTCTCCACCTGTGAAAGAATTCAAAGAGAGCTGTGCAGCCGAGGCCTTCCGGATGAGAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000227658.2
CDS CAA 72 bp CATGTTTCTGTGAGCTCCAAGTGGAGATTCTTCAAGTaGTCATCAGCCTGGGCCATAGAGTTCTCATCCGCA +
Preference number: 6 (lower is better)
Translates to: HVSVSSKWRFFK*SSAWAIEFSSA
Trigger: TGCGGATGAGAACTCTATGGCCCAGGCTGATGACAACTTGAAGAATCTCCACTTGGAGCTCACAGAAACATG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp CTCAGTTCTCTCAAGATTTCCGATGTGATGATAAACTCAGTCTGTTaGCCTTCTGCACACCTGGGATTTGGCCTCGATGTTCCCAATCCC +
Preference number: 6 (lower is better)
Translates to: LSSLKISDVMINSVC*PSAHLGFGLDVPNP
Trigger: GGGATTGGGAACATCGAGGCCAAATCCCAGGTGTGCAGAAGGCAAACAGACTGAGTTTATCATCACATCGGAAATCTTGAGAGAACTGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp GTTTTTGCCACATCACAGATCTGCCCTATCATTCGGATGCGATTGTaGAGGCCGCATTCACCACTCAGTTCTCTCAAGATTTCCGATGTG +
Preference number: 6 (lower is better)
Translates to: VFATSQICPIIRMRL*RPHSPLSSLKISDV
Trigger: CACATCGGAAATCTTGAGAGAACTGAGTGGTGAATGCGGCCTCAACAATCGCATCCGAATGATAGGGCAGATCTGTGATGTGGCAAAAAC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 72 bp CATCACAGATCTGCCCTATCATTCGGATGCGATTGTTaGGGCCGCATTCACCACTCAGTTCTCTCAAGATTT +
Preference number: 6 (lower is better)
Translates to: HHRSALSFGCDC*GRIHHSVLSRF
Trigger: AAATCTTGAGAGAACTGAGTGGTGAATGCGGCCTCAACAATCGCATCCGAATGATAGGGCAGATCTGTGATG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 72 bp GAACTTGACCAGGTTGACAAGTACCAGAAGGAATTCTaGGGACAAGCCAACATCCATCCACTGCAGGACAAA +
Preference number: 6 (lower is better)
Translates to: ELDQVDKYQKEF*GQANIHPLQDK
Trigger: TTTGTCCTGCAGTGGATGGATGTTGGCTTGTCCTCAGAATTCCTTCTGGTACTTGTCAACCTGGTCAAGTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp TCCTCAAGCTTCTTAGTTTTTGCCACATCACAGATCTaGCCTATCATTCGGATGCGATTGTTGAGGCCGCAT +
Preference number: 6 (lower is better)
Translates to: SSSFLVFATSQI*PIIRMRLLRPH
Trigger: ATGCGGCCTCAACAATCGCATCCGAATGATAGGGCAGATCTGTGATGTGGCAAAAACTAAGAAGCTTGAGGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp TCTGCTTTTGGGTCTCTCATTAAGACTGGTGCTCCGTaGTCTGAAACTGTCCTTCTCAGGGGTATCATCAAA +
Preference number: 6 (lower is better)
Translates to: SAFGSLIKTGAP*SETVLLRGIIK
Trigger: TTTGATGATACCCCTGAGAAGGACAGTTTCAGAGCACGGAGCACCAGTCTTAATGAGAGACCCAAAAGCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000097373.2
ENSMUST00000226398.2
ENSMUST00000227607.2
CDS CCA 72 bp AAACTCAGTCTGTTTGCCTTCTGCACACCTGGGATTTaGCCTCGATGTTCCCAATCCCAACAGTATCTTGAA +
Preference number: 6 (lower is better)
Translates to: KLSLFAFCTPGI*PRCSQSQQYLE
Trigger: TTCAAGATACTGTTGGGATTGGGAACATCGAGGCCAAATCCCAGGTGTGCAGAAGGCAAACAGACTGAGTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 72 bp ATTCTTTCACAGGTGGAGAGTTATTCAGGCCTTGTTTaGGGGCTCTGGCTATCCTCAAACTTTTGGGTCTCT +
Preference number: 6 (lower is better)
Translates to: ILSQVESYSGLV*GLWLSSNFWVS
Trigger: AGAGACCCAAAAGTTTGAGGATAGCCAGAGCCCCCAAACAAGGCCTGAATAACTCTCCACCTGTGAAAGAAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226284.2
ENSMUST00000227658.2
ENSMUST00000227745.2
CDS CAA 72 bp ACATCACAGATCTGCCCTATCATTCGGATGCGATTGTaGAGGCCGCATTCACCACTCAGTTCTCTCAAGATT +
Preference number: 6 (lower is better)
Translates to: TSQICPIIRMRL*RPHSPLSSLKI
Trigger: AATCTTGAGAGAACTGAGTGGTGAATGCGGCCTCAACAATCGCATCCGAATGATAGGGCAGATCTGTGATGT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp AATTCTTTCACAGGTGGAGAGTTATTCAGGCCTTGTTaGGGGGCTCTGGCTATCCTCAAACTTTTGGGTCTC +
Preference number: 6 (lower is better)
Translates to: NSFTGGELFRPC*GALAILKLLGL
Trigger: GAGACCCAAAAGTTTGAGGATAGCCAGAGCCCCCAAACAAGGCCTGAATAACTCTCCACCTGTGAAAGAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226284.2
ENSMUST00000227658.2
ENSMUST00000227745.2
CDS CAA 90 bp TTAGTTTTTGCCACATCACAGATCTGCCCTATCATTCGGATGCGATaGTTGAGGCCGCATTCACCACTCAGTTCTCTCAAGATTTCCGAT +
Preference number: 6 (lower is better)
Translates to: LVFATSQICPIIRMR*LRPHSPLSSLKISD
Trigger: ATCGGAAATCTTGAGAGAACTGAGTGGTGAATGCGGCCTCAACAATCGCATCCGAATGATAGGGCAGATCTGTGATGTGGCAAAAACTAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp ACAGCTCTCTTTGAATTCTTTCACAGGTGGAGAGTTATTCAGGCCTaGTTTGGGGGCTCTGGCTATCCTCAAACTTTTGGGTCTCTCATT +
Preference number: 6 (lower is better)
Translates to: TALFEFFHRWRVIQA*FGGSGYPQTFGSLI
Trigger: AATGAGAGACCCAAAAGTTTGAGGATAGCCAGAGCCCCCAAACAAGGCCTGAATAACTCTCCACCTGTGAAAGAATTCAAAGAGAGCTGT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226284.2
ENSMUST00000227658.2
ENSMUST00000227745.2
CDS TCA 72 bp GATTTGGCCTCGATGTTCCCAATCCCAACAGTATCTTaGACTTCTCCTTCAAGCCGGAATCTTTGCTTGTTG +
Preference number: 6 (lower is better)
Translates to: DLASMFPIPTVS*TSPSSRNLCLL
Trigger: CAACAAGCAAAGATTCCGGCTTGAAGGAGAAGTTCAAGATACTGTTGGGATTGGGAACATCGAGGCCAAATC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS GCA 72 bp CAAACTTTTGGGTCTCTCATTAAGACTGGTGCTCCGTaGTCTGAAACTGTCCTTCTCAGGGGTATCATCAAA +
Preference number: 6 (lower is better)
Translates to: QTFGSLIKTGAP*SETVLLRGIIK
Trigger: TTTGATGATACCCCTGAGAAGGACAGTTTCAGAGCACGGAGCACCAGTCTTAATGAGAGACCCAAAAGTTTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000226284.2
ENSMUST00000227658.2
ENSMUST00000227745.2
CDS CAA 72 bp GGATTTGGCCTCGATGTTCCCAATCCCAACAGTATCTaGAACTTCTCCTTCAAGCCGGAATCTTTGCTTGTT +
Preference number: 6 (lower is better)
Translates to: GFGLDVPNPNSI*NFSFKPESLLV
Trigger: AACAAGCAAAGATTCCGGCTTGAAGGAGAAGTTCAAGATACTGTTGGGATTGGGAACATCGAGGCCAAATCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp TTTGAATTCTTTCACAGGTGGAGAGTTATTCAGGCCTaGTTTGGGGGCTCTGGCTATCCTCAAACTTTTGGG +
Preference number: 6 (lower is better)
Translates to: FEFFHRWRVIQA*FGGSGYPQTFG
Trigger: CCCAAAAGTTTGAGGATAGCCAGAGCCCCCAAACAAGGCCTGAATAACTCTCCACCTGTGAAAGAATTCAAA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226284.2
ENSMUST00000227658.2
ENSMUST00000227745.2
CDS CAA 90 bp AGCAGAATATCCCATGTCACAGCCTGGAGCTCCTTCCTATACTTCTaGATGAGTCTTGTTATGGACAGAACAATCTCATATGACACCACC +
Preference number: 6 (lower is better)
Translates to: SRISHVTAWSSFLYF*MSLVMDRTISYDTT
Trigger: GGTGGTGTCATATGAGATTGTTCTGTCCATAACAAGACTCATCAAGAAGTATAGGAAGGAGCTCCAGGCTGTGACATGGGATATTCTGCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 90 bp CTCTCTTTGAATTCTTTCACAGGTGGAGAGTTATTCAGGCCTTGTTaGGGGGCTCTGGCTATCCTCAAACTTTTGGGTCTCTCATTAAGA +
Preference number: 6 (lower is better)
Translates to: LSLNSFTGGELFRPC*GALAILKLLGLSLR
Trigger: TCTTAATGAGAGACCCAAAAGTTTGAGGATAGCCAGAGCCCCCAAACAAGGCCTGAATAACTCTCCACCTGTGAAAGAATTCAAAGAGAG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000226284.2
ENSMUST00000227658.2
ENSMUST00000227745.2
CDS CCA 72 bp TCAATGATGTCCAGCAGAATATCCCATGTCACAGCCTaGAGCTCCTTCCTATACTTCTTGATGAGTCTTGTT +
Preference number: 6 (lower is better)
Translates to: SMMSSRISHVTA*SSFLYFLMSLV
Trigger: AACAAGACTCATCAAGAAGTATAGGAAGGAGCTCCAGGCTGTGACATGGGATATTCTGCTGGACATCATTGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CCA 72 bp GGCCTTGTTCCAGGCAGTACACCATCTCACGCTGTCTaGTCTTGTCCAAATAGTTGTGATAAGATATTAATG +
Preference number: 6 (lower is better)
Translates to: GLVPGSTPSHAV*SCPNSCDKILM
Trigger: CATTAATATCTTATCACAACTATTTGGACAAGACCAGACAGCGTGAGATGGTGTACTGCCTGGAACAAGGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS TCA 72 bp CTTGATGAGTCTTGTTATGGACAGAACAATCTCATATaGCACCACCTCATTGGGACAGGTCATAGCCTCATA +
Preference number: 6 (lower is better)
Translates to: LDESCYGQNNLI*HHLIGTGHSLI
Trigger: TATGAGGCTATGACCTGTCCCAATGAGGTGGTGTCATATGAGATTGTTCTGTCCATAACAAGACTCATCAAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2
CDS CAA 72 bp TCCCATGTCACAGCCTGGAGCTCCTTCCTATACTTCTaGATGAGTCTTGTTATGGACAGAACAATCTCATAT +
Preference number: 6 (lower is better)
Translates to: SHVTAWSSFLYF*MSLVMDRTISY
Trigger: ATATGAGATTGTTCTGTCCATAACAAGACTCATCAAGAAGTATAGGAAGGAGCTCCAGGCTGTGACATGGGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000097373.2
ENSMUST00000226284.2
ENSMUST00000226398.2
ENSMUST00000227607.2
ENSMUST00000227745.2
ENSMUST00000228412.2