Pregenerated sensors for TRUB1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000025086Ensembl transcript IDs: ENSMUST00000026072.5, ENSMUST00000026073.14, ENSMUST00000238107.2
Found 139 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGGGCATCAATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTCGATaGCCCAGAATGCCAGGGCAGGGATATGGGAGTGGGTGGGTGGGT | + |
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Preference number: 1 (lower is better) Translates to: RASMGGEALGPVKAR*PRMPGQGYGSGWVG Trigger: ACCCACCCACCCACTCCCATATCCCTGCCCTGGCATTCTGGGGCATCGAGCCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR CCA 90 bp | GCTGGGTCCCTTGGAGCTGAAGTAGCGAGAGCCGCCTGCTGTGGGTaGGTGCAGAATCTACACTCCGTGCCTGCTGGACAGGCAGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: AGSLGAEVARAACCG*VQNLHSVPAGQAVC Trigger: ACACACTGCCTGTCCAGCAGGCACGGAGTGTAGATTCTGCACCCACCCACAGCAGGCGGCTCTCGCTACTTCAGCTCCAAGGGACCCAGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR TCA 90 bp | GACAGCCTTGTAGGGCATCAATGGGAGGAGAGGCCCTTGGTCCTGTaGAGGCTCGATGCCCCAGAATGCCAGGGCAGGGATATGGGAGTG | + |
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Preference number: 1 (lower is better) Translates to: DSLVGHQWEERPLVL*RLDAPECQGRDMGV Trigger: CACTCCCATATCCCTGCCCTGGCATTCTGGGGCATCGAGCCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGCCCTACAAGGCTGTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR CCA 90 bp | ATGTGTGGGGGATGGGCACGGTGTACGCGCACTGCAGAGTGTTTGTaGACAACTTGCTGGGGTAGAGGTTCTCACAAAGGTTGCCCAGGG | + |
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Preference number: 1 (lower is better) Translates to: MCGGWARCTRTAECL*TTCWGRGSHKGCPG Trigger: CCCTGGGCAACCTTTGTGAGAACCTCTACCCCAGCAAGTTGTCCACAAACACTCTGCAGTGCGCGTACACCGTGCCCATCCCCCACACAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR CCA 90 bp | ACTGTGTATCTCCTTCCCAAAGAGGTCAGAGGGTATAGAATTCCCTaGGACTGGAGTCATGGAGGGCTGCGAACCGCCATGAGGGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: TVYLLPKEVRGYRIP*DWSHGGLRTAMRVL Trigger: CAGCACCCTCATGGCGGTTCGCAGCCCTCCATGACTCCAGTCCCAGGGAATTCTATACCCTCTGACCTCTTTGGGAAGGAGATACACAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| 3UTR GCA 90 bp | GAGTGTTTGTGGACAACTTGCTGGGGTAGAGGTTCTCACAAAGGTTaGCCAGGGGTCAAAGCTCAAGTCATTGGTCCTGGTGTCACCAGC | + |
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Preference number: 1 (lower is better) Translates to: ECLWTTCWGRGSHKG*PGVKAQVIGPGVTS Trigger: GCTGGTGACACCAGGACCAATGACTTGAGCTTTGACCCCTGGGCAACCTTTGTGAGAACCTCTACCCCAGCAAGTTGTCCACAAACACTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR CCA 90 bp | TTCTCACAAAGGTTGCCCAGGGGTCAAAGCTCAAGTCATTGGTCCTaGTGTCACCAGCTGAGCCAGGTTACCTGCCCTGAGTTAACATTA | + |
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Preference number: 1 (lower is better) Translates to: FSQRLPRGQSSSHWS*CHQLSQVTCPELTL Trigger: TAATGTTAACTCAGGGCAGGTAACCTGGCTCAGCTGGTGACACCAGGACCAATGACTTGAGCTTTGACCCCTGGGCAACCTTTGTGAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR TCA 90 bp | CACAGTCCACGGCTACAGGAGCTGAGCTCTGCTGAATACAGGATCTaGAATGAATCACGTCTCACGCTATTTACATTCTGTCAGTGGCCA | + |
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Preference number: 1 (lower is better) Translates to: HSPRLQELSSAEYRI*NESRLTLFTFCQWP Trigger: TGGCCACTGACAGAATGTAAATAGCGTGAGACGTGATTCATTTCAGATCCTGTATTCAGCAGAGCTCAGCTCCTGTAGCCGTGGACTGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR TCA 90 bp | TCCACATGGCCACGCCTCCTGAGTGCTGGGATTAAAGCTTCACCGTaGCATCAGGCTCAAAGCTGTGTAACTTCCAATTCATCAATTTAC | + |
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Preference number: 1 (lower is better) Translates to: STWPRLLSAGIKASP*HQAQSCVTSNSSIY Trigger: GTAAATTGATGAATTGGAAGTTACACAGCTTTGAGCCTGATGTCACGGTGAAGCTTTAATCCCAGCACTCAGGAGGCGTGGCCATGTGGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR CCA 90 bp | TCTCGATATCTTAAAGTAATTATTTTATGTATGTGTGTGGAGGCATaGGTGTTCGTTCACAGGGGCCCACAGGCCACAAGTGGGTGCTGG | + |
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Preference number: 1 (lower is better) Translates to: SRYLKVIILCMCVEA*VFVHRGPQATSGCW Trigger: CCAGCACCCACTTGTGGCCTGTGGGCCCCTGTGAACGAACACCCATGCCTCCACACACATACATAAAATAATTACTTTAAGATATCGAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR TCA 90 bp | AAGTCATTGGTCCTGGTGTCACCAGCTGAGCCAGGTTACCTGCCCTaGGTTAACATTAACGTTTTTATTAAAACACGTTGCCAGTCTGCT | + |
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Preference number: 1 (lower is better) Translates to: KSLVLVSPAEPGYLP*VNINVFIKTRCQSA Trigger: AGCAGACTGGCAACGTGTTTTAATAAAAACGTTAATGTTAACTCAGGGCAGGTAACCTGGCTCAGCTGGTGACACCAGGACCAATGACTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR GCA 90 bp | AGCTCAAGTCATTGGTCCTGGTGTCACCAGCTGAGCCAGGTTACCTaGCCTGAGTTAACATTAACGTTTTTATTAAAACACGTTGCCAGT | + |
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Preference number: 1 (lower is better) Translates to: SSSHWSWCHQLSQVT*PELTLTFLLKHVAS Trigger: ACTGGCAACGTGTTTTAATAAAAACGTTAATGTTAACTCAGGGCAGGTAACCTGGCTCAGCTGGTGACACCAGGACCAATGACTTGAGCT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR GCA 90 bp | GTCTCACGCTATTTACATTCTGTCAGTGGCCAAAGCAGGAGTTTGTaGATTTACAGATATGTATTAGGACAACGTATTGATTCCCGGGAT | + |
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Preference number: 1 (lower is better) Translates to: VSRYLHSVSGQSRSL*IYRYVLGQRIDSRD Trigger: ATCCCGGGAATCAATACGTTGTCCTAATACATATCTGTAAATGCACAAACTCCTGCTTTGGCCACTGACAGAATGTAAATAGCGTGAGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR GCA 90 bp | AAGAGTTCTATTTACTTTAATTGTTACATTTGTGGTCTTTATTTGTaGATATGTCTGAGGACTGTGTATCTCCTTCCCAAAGAGGTCAGA | + |
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Preference number: 1 (lower is better) Translates to: KSSIYFNCYICGLYL*ICLRTVYLLPKEVR Trigger: TCTGACCTCTTTGGGAAGGAGATACACAGTCCTCAGACATATGCACAAATAAAGACCACAAATGTAACAATTAAAGTAAATAGAACTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| 3UTR CAA 90 bp | GGGCTGCGAACCGCCATGAGGGTGCTGGGAATCAAACCCAGGTCCTaGGAAGAGCAGTTAGTGCTCCTAACTGCTGAGCCATCTCTGGAG | + |
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Preference number: 2 (lower is better) Translates to: GLRTAMRVLGIKPRS*EEQLVLLTAEPSLE Trigger: CTCCAGAGATGGCTCAGCAGTTAGGAGCACTAACTGCTCTTCCAAGGACCTGGGTTTGATTCCCAGCACCCTCATGGCGGTTCGCAGCCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| 3UTR-3UTR GCA 90 bp | AGCCGCATATGTAGCAGAGGACAGCCTTGTAGGGCATCAATGGGAGGAGAGGCCCCTGCTGTGGGTGGGTaGAGAATCTACACTCCGTGC | + |
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Preference number: 2 (lower is better) Translates to: SRICSRGQPCRASMGGEAPAVGG*RIYTPC Trigger: GCACGGAGTGTAGATTCTGCACCCACCCACAGCAGG...GGCCTCTCCTCCCATTGATGCCCTACAAGGCTGTCCTCTGCTACATATGCGGCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR-3UTR TCA 90 bp | AGCCGCATATGTAGCAGAGGACAGCCTTGTAGGGCATCAATGGGAGGAGAGGCCCATGGCCACGCCTCCTaGGTGCTGGGATTAAAGCTT | + |
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Preference number: 2 (lower is better) Translates to: SRICSRGQPCRASMGGEAHGHAS*VLGLKL Trigger: AAGCTTTAATCCCAGCACTCAGGAGGCGTGGCCATG...GGCCTCTCCTCCCATTGATGCCCTACAAGGCTGTCCTCTGCTACATATGCGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR-3UTR GCA 90 bp | AGCCGCATATGTAGCAGAGGACAGCCTTGTAGGGCATCAATGGGAGGAGAGGCCAGCAGCCATAGGCTCTaGAAACACACAGGACAGCTC | + |
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Preference number: 2 (lower is better) Translates to: SRICSRGQPCRASMGGEASSHRL*KHTGQL Trigger: GAGCTGTCCTGTGTGTTTGCAGAGCCTATGGCTGCT...GGCCTCTCCTCCCATTGATGCCCTACAAGGCTGTCCTCTGCTACATATGCGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR-3UTR CCA 90 bp | GCATATGTAGCAGAGGACAGCCTTGTAGGGCATCAATGGGAGGAGAGGCCCTTGATGTGTGTGGAGGCATaGGTGTTCGTTCACAGGGGC | + |
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Preference number: 2 (lower is better) Translates to: AYVAEDSLVGHQWEERPLMCVEA*VFVHRG Trigger: GCCCCTGTGAACGAACACCCATGCCTCCACACACAT...CAAGGGCCTCTCCTCCCATTGATGCCCTACAAGGCTGTCCTCTGCTACATATGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR CAA 90 bp | TTTATGTGTGGGGGATGGGCACGGTGTACGCGCACTGCAGAGTGTTaGTGGACAACTTGCTGGGGTAGAGGTTCTCACAAAGGTTGCCCA | + |
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Preference number: 2 (lower is better) Translates to: FMCGGWARCTRTAEC*WTTCWGRGSHKGCP Trigger: TGGGCAACCTTTGTGAGAACCTCTACCCCAGCAAGTTGTCCACAAACACTCTGCAGTGCGCGTACACCGTGCCCATCCCCCACACATAAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR-3UTR TCA 90 bp | CTGAGTACAGCCCACCAGCACCTTCCAGCAGCCATAGGCTCTGCAAACACACAGAGTTTGACACTTCTGTaGGACCAGTGGAACCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LSTAHQHLPAAIGSANTQSLTLL*DQWNLQ Trigger: CTGCAGGTTCCACTGGTCTCACAGAAGTGTCAAACT...CTGTGTGTTTGCAGAGCCTATGGCTGCTGGAAGGTGCTGGTGGGCTGTACTCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR-3UTR TCA 90 bp | GTCACTGGACCAGGGTTCCGCAGTCACAGAGAGGCGCTAACGAACAGGCAGGAGAGGACAGCTCGACACTaGACACTTCAAATGTATTCA | + |
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Preference number: 2 (lower is better) Translates to: VTGPGFRSHREALTNRQERTARH*TLQMYS Trigger: TGAATACATTTGAAGTGTTCAGTGTCGAGCTGTCCT...CTCCTGCCTGTTCGTTAGCGCCTCTCTGTGACTGCGGAACCCTGGTCCAGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR-3UTR CCA 90 bp | AGCCGCATATGTAGCAGAGGACAGCCTTGTAGGGCATCAATGGGAGGAGAGGCCACTGCAGAGTGTTTGTaGACAACTTGCTGGGGTAGA | + |
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Preference number: 2 (lower is better) Translates to: SRICSRGQPCRASMGGEATAECL*TTCWGR Trigger: TCTACCCCAGCAAGTTGTCCACAAACACTCTGCAGT...GGCCTCTCCTCCCATTGATGCCCTACAAGGCTGTCCTCTGCTACATATGCGGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR-3UTR CCA 90 bp | CAGTTCACAGCGGAGGGGCCGGCCAACAGAAATCAGTCTGCTTTTATAGCCTCTGGGTATAGAATTCCCTaGGACTGGAGTCATGGAGGG | + |
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Preference number: 2 (lower is better) Translates to: QFTAEGPANRNQSAFIASGYRIP*DWSHGG Trigger: CCCTCCATGACTCCAGTCCCAGGGAATTCTATACCC...AGAGGCTATAAAAGCAGACTGATTTCTGTTGGCCGGCCCCTCCGCTGTGAACTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| 3UTR-3UTR GCA 90 bp | GAGAGCCGCCTGCTGTGGGTGGGTGCAGAATCTACACTCCGTGCCTGCTGGACAGACATTAAGACATCTTaGAAAGAACTCAAGAGGTGT | + |
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Preference number: 2 (lower is better) Translates to: ESRLLWVGAESTLRACWTDIKTS*KELKRC Trigger: ACACCTCTTGAGTTCTTTGCAAGATGTCTTAATGTC...TGTCCAGCAGGCACGGAGTGTAGATTCTGCACCCACCCACAGCAGGCGGCTCTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR-3UTR TCA 90 bp | CGCCATGAGGGTGCTGGGAATCAAACCCAGGTCCTTGGAAGAGCAGTTAGTGCTCAGCCTCTAAAATCTTaGAAACACTCATCCTCGACG | + |
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Preference number: 2 (lower is better) Translates to: RHEGAGNQTQVLGRAVSAQPLKS*KHSSST Trigger: CGTCGAGGATGAGTGTTTTCAAGATTTTAGAGGCTG...AGCACTAACTGCTCTTCCAAGGACCTGGGTTTGATTCCCAGCACCCTCATGGCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| 3UTR-3UTR GCA 90 bp | TGTGGGGGATGGGCACGGTGTACGCGCACTGCAGAGTGTTTGTGGACAACTTGCTTTATTAAAACACGTTaGCAGTCTGCTGAGAATGCC | + |
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Preference number: 2 (lower is better) Translates to: CGGWARCTRTAECLWTTCFIKTR*QSAENA Trigger: GGCATTCTCAGCAGACTGGCAACGTGTTTTAATAAA...GCAAGTTGTCCACAAACACTCTGCAGTGCGCGTACACCGTGCCCATCCCCCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR-3UTR TCA 90 bp | GCATATGTAGCAGAGGACAGCCTTGTAGGGCATCAATGGGAGGAGAGGCCCTTGACATTTTTGGTACTTTaGTACCATGTGGTTGACCAC | + |
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Preference number: 2 (lower is better) Translates to: AYVAEDSLVGHQWEERPLTFLVL*YHVVDH Trigger: GTGGTCAACCACATGGTATCAAAGTACCAAAAATGT...CAAGGGCCTCTCCTCCCATTGATGCCCTACAAGGCTGTCCTCTGCTACATATGC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR-3UTR CCA 90 bp | TTTGTGCATATGTCTGAGGACTGTGTATCTCCTTCCCAAAGAGGTCAGAGGGTACTGCTGAGCCATCTCTaGAGGGCAGCCTCTAAAATC | + |
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Preference number: 2 (lower is better) Translates to: FVHMSEDCVSPSQRGQRVLLSHL*RAASKI Trigger: GATTTTAGAGGCTGCCCTCCAGAGATGGCTCAGCAG...TACCCTCTGACCTCTTTGGGAAGGAGATACACAGTCCTCAGACATATGCACAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| 3UTR CAA 90 bp | TGTCCAACCATGCTTTTTGTCTTAGCTACTTTAACATCAATTAACTaGCAGTTCACAGCGGAGGGGCCGGCCAACAGAAATCAGTCTGCT | + |
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Preference number: 2 (lower is better) Translates to: CPTMLFVLATLTSIN*QFTAEGPANRNQSA Trigger: AGCAGACTGATTTCTGTTGGCCGGCCCCTCCGCTGTGAACTGCAAGTTAATTGATGTTAAAGTAGCTAAGACAAAAAGCATGGTTGGACA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| 3UTR-3UTR CCA 90 bp | GAAGGTAGGTCACACAAAAGCAGGGAAACTTTAGCAACAATGTATAAAATCCCATCACAGAACTCCACATaGCCACGCCTCCTGAGTGCT | + |
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Preference number: 2 (lower is better) Translates to: EGRSHKSRETLATMYKIPSQNST*PRLLSA Trigger: AGCACTCAGGAGGCGTGGCCATGTGGAGTTCTGTGA...TGGGATTTTATACATTGTTGCTAAAGTTTCCCTGCTTTTGTGTGACCTACCTTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR-3UTR GCA 90 bp | TGCCCTGAGTTAACATTAACGTTTTTATTAAAACACGTTGCCAGTCTGCTGAGAAGAATCTACACTCCGTaGCTGCTGGACAGGCAGTGT | + |
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Preference number: 2 (lower is better) Translates to: CPELTLTFLLKHVASLLRRIYTP*LLDRQC Trigger: ACACTGCCTGTCCAGCAGGCACGGAGTGTAGATTCT...TCTCAGCAGACTGGCAACGTGTTTTAATAAAAACGTTAATGTTAACTCAGGGCA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR CAA 90 bp | TGTAAGAGTTCTATTTACTTTAATTGTTACATTTGTGGTCTTTATTaGTGCATATGTCTGAGGACTGTGTATCTCCTTCCCAAAGAGGTC | + |
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Preference number: 2 (lower is better) Translates to: CKSSIYFNCYICGLY*CICLRTVYLLPKEV Trigger: GACCTCTTTGGGAAGGAGATACACAGTCCTCAGACATATGCACAAATAAAGACCACAAATGTAACAATTAAAGTAAATAGAACTCTTACA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| 3UTR TCA 72 bp | CCACAGGCCACAAGTGGGTGCTGGGTCCCTTGGAGCTaGAGTAGCGAGAGCCGCCTGCTGTGGGTGGGTGCA | + |
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Preference number: 3 (lower is better) Translates to: PQATSGCWVPWS*SSESRLLWVGA Trigger: TGCACCCACCCACAGCAGGCGGCTCTCGCTACTTCAGCTCCAAGGGACCCAGCACCCACTTGTGGCCTGTGG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR GCA 72 bp | CCGCCTGCTGTGGGTGGGTGCAGAATCTACACTCCGTaGCTGCTGGACAGGCAGTGTGTCTTCGCCTCTCCA | + |
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Preference number: 3 (lower is better) Translates to: PPAVGGCRIYTP*LLDRQCVFASP Trigger: TGGAGAGGCGAAGACACACTGCCTGTCCAGCAGGCACGGAGTGTAGATTCTGCACCCACCCACAGCAGGCGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR GCA 72 bp | ATGGGAGGAGAGGCCCTTGGTCCTGTGAAGGCTCGATaGCCCAGAATGCCAGGGCAGGGATATGGGAGTGGG | + |
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Preference number: 3 (lower is better) Translates to: MGGEALGPVKAR*PRMPGQGYGSG Trigger: CCCACTCCCATATCCCTGCCCTGGCATTCTGGGGCATCGAGCCTTCACAGGACCAAGGGCCTCTCCTCCCAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR-3UTR CAA 90 bp | GGGTGGGTGGGGGAACACCCTCATAGAAGCAGGGGGAGGGATGGTGGGATTGGGCGCACTGCAGAGTGTTaGTGGACAACTTGCTGGGGT | + |
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Preference number: 3 (lower is better) Translates to: GWVGEHPHRSRGRDGGIGRTAEC*WTTCWG Trigger: ACCCCAGCAAGTTGTCCACAAACACTCTGCAGTGCG...CCCAATCCCACCATCCCTCCCCCTGCTTCTATGAGGGTGTTCCCCCACCCACCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR TCA 72 bp | GTAGGGCATCAATGGGAGGAGAGGCCCTTGGTCCTGTaGAGGCTCGATGCCCCAGAATGCCAGGGCAGGGAT | + |
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Preference number: 3 (lower is better) Translates to: VGHQWEERPLVL*RLDAPECQGRD Trigger: ATCCCTGCCCTGGCATTCTGGGGCATCGAGCCTTCACAGGACCAAGGGCCTCTCCTCCCATTGATGCCCTAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR TCA 72 bp | CCTGGGACTGGAGTCATGGAGGGCTGCGAACCGCCATaGGGGTGCTGGGAATCAAACCCAGGTCCTTGGAAG | + |
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Preference number: 3 (lower is better) Translates to: PGTGVMEGCEPP*GCWESNPGPWK Trigger: CTTCCAAGGACCTGGGTTTGATTCCCAGCACCCTCATGGCGGTTCGCAGCCCTCCATGACTCCAGTCCCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| 3UTR CCA 72 bp | CTTGGAGCTGAAGTAGCGAGAGCCGCCTGCTGTGGGTaGGTGCAGAATCTACACTCCGTGCCTGCTGGACAG | + |
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Preference number: 3 (lower is better) Translates to: LGAEVARAACCG*VQNLHSVPAGQ Trigger: CTGTCCAGCAGGCACGGAGTGTAGATTCTGCACCCACCCACAGCAGGCGGCTCTCGCTACTTCAGCTCCAAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR CCA 72 bp | CTGTGGGTGGGTGCAGAATCTACACTCCGTGCCTGCTaGACAGGCAGTGTGTCTTCGCCTCTCCAGTGTCCT | + |
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Preference number: 3 (lower is better) Translates to: LWVGAESTLRAC*TGSVSSPLQCP Trigger: AGGACACTGGAGAGGCGAAGACACACTGCCTGTCCAGCAGGCACGGAGTGTAGATTCTGCACCCACCCACAG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR CCA 72 bp | AGGTTGCCCAGGGGTCAAAGCTCAAGTCATTGGTCCTaGTGTCACCAGCTGAGCCAGGTTACCTGCCCTGAG | + |
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Preference number: 3 (lower is better) Translates to: RLPRGQSSSHWS*CHQLSQVTCPE Trigger: CTCAGGGCAGGTAACCTGGCTCAGCTGGTGACACCAGGACCAATGACTTGAGCTTTGACCCCTGGGCAACCT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR CCA 72 bp | CTCCTTCCCAAAGAGGTCAGAGGGTATAGAATTCCCTaGGACTGGAGTCATGGAGGGCTGCGAACCGCCATG | + |
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Preference number: 3 (lower is better) Translates to: LLPKEVRGYRIP*DWSHGGLRTAM Trigger: CATGGCGGTTCGCAGCCCTCCATGACTCCAGTCCCAGGGAATTCTATACCCTCTGACCTCTTTGGGAAGGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| 3UTR GCA 72 bp | TACAGCCCACCAGCACCTTCCAGCAGCCATAGGCTCTaGAAACACACAGGACAGCTCGACACTGAACACTTC | + |
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Preference number: 3 (lower is better) Translates to: YSPPAPSSSHRL*KHTGQLDTEHF Trigger: GAAGTGTTCAGTGTCGAGCTGTCCTGTGTGTTTGCAGAGCCTATGGCTGCTGGAAGGTGCTGGTGGGCTGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR CCA 72 bp | GGATGGGCACGGTGTACGCGCACTGCAGAGTGTTTGTaGACAACTTGCTGGGGTAGAGGTTCTCACAAAGGT | + |
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Preference number: 3 (lower is better) Translates to: GWARCTRTAECL*TTCWGRGSHKG Trigger: ACCTTTGTGAGAACCTCTACCCCAGCAAGTTGTCCACAAACACTCTGCAGTGCGCGTACACCGTGCCCATCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR TCA 72 bp | TCCCCGAGTCTAAGCAAAGCAAGTTTGACACTTCTGTaGGACCAGTGGAACCTGCAGCTCAGACTTCAGGAT | + |
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Preference number: 3 (lower is better) Translates to: SPSLSKASLTLL*DQWNLQLRLQD Trigger: ATCCTGAAGTCTGAGCTGCAGGTTCCACTGGTCTCACAGAAGTGTCAAACTTGCTTTGCTTAGACTCGGGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR TCA 72 bp | CCACGCCTCCTGAGTGCTGGGATTAAAGCTTCACCGTaGCATCAGGCTCAAAGCTGTGTAACTTCCAATTCA | + |
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Preference number: 3 (lower is better) Translates to: PRLLSAGIKASP*HQAQSCVTSNS Trigger: TGAATTGGAAGTTACACAGCTTTGAGCCTGATGTCACGGTGAAGCTTTAATCCCAGCACTCAGGAGGCGTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| 3UTR-3UTR CAA 90 bp | CTGGGAATCAAACCCAGGTCCTTGGAAGAGCAGTTAGTGCTCCTAACTGCTGAGGCAGCCTCTAAAATCTaGAAAACACTCATCCTCGAC | + |
|
Preference number: 3 (lower is better) Translates to: LGIKPRSLEEQLVLLTAEAASKI*KTLILD Trigger: GTCGAGGATGAGTGTTTTCAAGATTTTAGAGGCTGC...CTCAGCAGTTAGGAGCACTAACTGCTCTTCCAAGGACCTGGGTTTGATTCCCAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| 3UTR TCA 72 bp | ACAGAAATAGCTGCCACAGTCCACGGCTACAGGAGCTaGGCTCTGCTGAATACAGGATCTGAAATGAATCAC | + |
|
Preference number: 3 (lower is better) Translates to: TEIAATVHGYRS*ALLNTGSEMNH Trigger: GTGATTCATTTCAGATCCTGTATTCAGCAGAGCTCAGCTCCTGTAGCCGTGGACTGTGGCAGCTATTTCTGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| 3UTR CCA 72 bp | ACATTAAGACATCTTGCAAAGAACTCAAGAGGTGTATaGGCATTCCTGGTCGGGACAGACACCAACCAGGAA | + |
|
Preference number: 3 (lower is better) Translates to: TLRHLAKNSRGV*AFLVGTDTNQE Trigger: TTCCTGGTTGGTGTCTGTCCCGACCAGGAATGCCCATACACCTCTTGAGTTCTTTGCAAGATGTCTTAATGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| 3UTR TCA 72 bp | CGGCTACAGGAGCTGAGCTCTGCTGAATACAGGATCTaGAATGAATCACGTCTCACGCTATTTACATTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: RLQELSSAEYRI*NESRLTLFTFC Trigger: ACAGAATGTAAATAGCGTGAGACGTGATTCATTTCAGATCCTGTATTCAGCAGAGCTCAGCTCCTGTAGCCG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| 3UTR TCA 72 bp | GTCCTGGTGTCACCAGCTGAGCCAGGTTACCTGCCCTaGGTTAACATTAACGTTTTTATTAAAACACGTTGC | + |
|
Preference number: 3 (lower is better) Translates to: VLVSPAEPGYLP*VNINVFIKTRC Trigger: GCAACGTGTTTTAATAAAAACGTTAATGTTAACTCAGGGCAGGTAACCTGGCTCAGCTGGTGACACCAGGAC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| 3UTR-3UTR CAA 90 bp | GAAGGTAGGTCACACAAAAGCAGGGAAACTTTAGCAACAATGTATAAAATCCCAAGGTTCTCACAAAGGTaGCCCAGGGGTCAAAGCTCA | + |
|
Preference number: 3 (lower is better) Translates to: EGRSHKSRETLATMYKIPRFSQR*PRGQSS Trigger: TGAGCTTTGACCCCTGGGCAACCTTTGTGAGAACCT...TGGGATTTTATACATTGTTGCTAAAGTTTCCCTGCTTTTGTGTGACCTACCTTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| 3UTR GCA 72 bp | CATTGGTCCTGGTGTCACCAGCTGAGCCAGGTTACCTaGCCTGAGTTAACATTAACGTTTTTATTAAAACAC | + |
|
Preference number: 3 (lower is better) Translates to: HWSWCHQLSQVT*PELTLTFLLKH Trigger: GTGTTTTAATAAAAACGTTAATGTTAACTCAGGGCAGGTAACCTGGCTCAGCTGGTGACACCAGGACCAATG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| 3UTR CCA 72 bp | TCTAGAAAATCACATTTTTGGTACTTTGATACCATGTaGTTGACCACAGAAATAGCTGCCACAGTCCACGGC | + |
|
Preference number: 3 (lower is better) Translates to: SRKSHFWYFDTM*LTTEIAATVHG Trigger: GCCGTGGACTGTGGCAGCTATTTCTGTGGTCAACCACATGGTATCAAAGTACCAAAAATGTGATTTTCTAGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| 3UTR TCA 72 bp | ATAAATTTTACTCTTCACTATGAGAAGAGTATAGATTaGCCCATGGCTGCAGCCGCATATGTAGCAGAGGAC | + |
|
Preference number: 3 (lower is better) Translates to: INFTLHYEKSID*PMAAAAYVAED Trigger: GTCCTCTGCTACATATGCGGCTGCAGCCATGGGTCAATCTATACTCTTCTCATAGTGAAGAGTAAAATTTAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| 3UTR TCA 72 bp | ATTGTTACATTTGTGGTCTTTATTTGTGCATATGTCTaGGGACTGTGTATCTCCTTCCCAAAGAGGTCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: IVTFVVFICAYV*GLCISFPKRSE Trigger: CTCTGACCTCTTTGGGAAGGAGATACACAGTCCTCAGACATATGCACAAATAAAGACCACAAATGTAACAAT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| 3UTR GCA 72 bp | AAATATACGTTAGTAAATGAGGGAAGCCTTGACTATTaGCACAGCTGTACAATACCTTTCCACATTCCTGCA | + |
|
Preference number: 3 (lower is better) Translates to: KYTLVNEGSLDY*HSCTIPFHIPA Trigger: TGCAGGAATGTGGAAAGGTATTGTACAGCTGTGGCAATAGTCAAGGCTTCCCTCATTTACTAACGTATATTT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| 3UTR CCA 72 bp | AATGAATCACGTCTCACGCTATTTACATTCTGTCAGTaGCCAAAGCAGGAGTTTGTGCATTTACAGATATGT | + |
|
Preference number: 3 (lower is better) Translates to: NESRLTLFTFCQ*PKQEFVHLQIC Trigger: ACATATCTGTAAATGCACAAACTCCTGCTTTGGCCACTGACAGAATGTAAATAGCGTGAGACGTGATTCATT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| 3UTR GCA 72 bp | TATTTACATTCTGTCAGTGGCCAAAGCAGGAGTTTGTaGATTTACAGATATGTATTAGGACAACGTATTGAT | + |
|
Preference number: 3 (lower is better) Translates to: YLHSVSGQSRSL*IYRYVLGQRID Trigger: ATCAATACGTTGTCCTAATACATATCTGTAAATGCACAAACTCCTGCTTTGGCCACTGACAGAATGTAAATA 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS-3UTR GCA 90 bp | GGGTGGGTGGGGGAACACCCTCATAGAAGCAGGGGGAGGGATGGTGGGATTGGGTTGGAGGCCGGGGCTTaGGATTCAGTCCTGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: GWVGEHPHRSRGRDGGIGLEAGA*DSVLAA Trigger: AGCGGCCAGGACTGAATCGCAAGCCCCGGCCTCCAA...CCCAATCCCACCATCCCTCCCCCTGCTTCTATGAGGGTGTTCCCCCACCCACCC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS-3UTR GCA 90 bp | GTCACTGGACCAGGGTTCCGCAGTCACAGAGAGGCGCTAACGAACAGGCAGGAGGGCCCTTTGGGCTTGTaGACGGCGAACACGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VTGPGFRSHREALTNRQEGPLGL*TANTPL Trigger: GAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCC...CTCCTGCCTGTTCGTTAGCGCCTCTCTGTGACTGCGGAACCCTGGTCCAGTGAC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS-3UTR CCA 90 bp | GGGTGGGTGGGGGAACACCCTCATAGAAGCAGGGGGAGGGATGGTGGGATTGGGCTGAAGTGGGCCCTTTaGGCTTGTGCACGGCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: GWVGEHPHRSRGRDGGIGLKWAL*ACARRT Trigger: TGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAG...CCCAATCCCACCATCCCTCCCCCTGCTTCTATGAGGGTGTTCCCCCACCCACCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS-3UTR TCA 90 bp | GAGAGCCGCCTGCTGTGGGTGGGTGCAGAATCTACACTCCGTGCCTGCTGGACAGTCCACAATCAGAGGTaGAACCACCTCTGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: ESRLLWVGAESTLRACWTVHNQR*NHLCLC Trigger: GCAGAGGCAGAGGTGGTTTCACCTCTGATTGTGGAC...TGTCCAGCAGGCACGGAGTGTAGATTCTGCACCCACCCACAGCAGGCGGCTCTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS-3UTR CCA 90 bp | GTCACTGGACCAGGGTTCCGCAGTCACAGAGAGGCGCTAACGAACAGGCAGGAGTCAGCTCCAGCACGCTaGCACAGGAAGAGAGCTCTT | + |
|
Preference number: 4 (lower is better) Translates to: VTGPGFRSHREALTNRQESAPAR*HRKRAL Trigger: AAGAGCTCTCTTCCTGTGCCAGCGTGCTGGAGCTGA...CTCCTGCCTGTTCGTTAGCGCCTCTCTGTGACTGCGGAACCCTGGTCCAGTGAC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS-3UTR GCA 90 bp | CTGGGAATCAAACCCAGGTCCTTGGAAGAGCAGTTAGTGCTCCTAACTGCTGAGTTGGAGGCCGGGGCTTaGGATTCAGTCCTGGCCGCT | + |
|
Preference number: 4 (lower is better) Translates to: LGIKPRSLEEQLVLLTAELEAGA*DSVLAA Trigger: AGCGGCCAGGACTGAATCGCAAGCCCCGGCCTCCAA...CTCAGCAGTTAGGAGCACTAACTGCTCTTCCAAGGACCTGGGTTTGATTCCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| CDS-3UTR GCA 90 bp | AGGACTGTGTATCTCCTTCCCAAAGAGGTCAGAGGGTATAGAATTCCCTGGGACGGCCCTTTGGGCTTGTaGACGGCGAACACGCCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: RTVYLLPKEVRGYRIPWDGPLGL*TANTPL Trigger: GAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCC...GTCCCAGGGAATTCTATACCCTCTGACCTCTTTGGGAAGGAGATACACAGTCCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| CDS-3UTR CCA 90 bp | CGCCATGAGGGTGCTGGGAATCAAACCCAGGTCCTTGGAAGAGCAGTTAGTGCTCTGAAGTGGGCCCTTTaGGCTTGTGCACGGCGAACA | + |
|
Preference number: 4 (lower is better) Translates to: RHEGAGNQTQVLGRAVSALKWAL*ACARRT Trigger: TGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAG...AGCACTAACTGCTCTTCCAAGGACCTGGGTTTGATTCCCAGCACCCTCATGGCG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| CDS-3UTR TCA 90 bp | CTGGGAATCAAACCCAGGTCCTTGGAAGAGCAGTTAGTGCTCCTAACTGCTGAGGGCCTCGGCTGTTCCTaGAGTGTCAGGAGCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: LGIKPRSLEEQLVLLTAEGLGCS*SVRSCV Trigger: GACACAGCTCCTGACACTTCAGGAACAGCCGAGGCC...CTCAGCAGTTAGGAGCACTAACTGCTCTTCCAAGGACCTGGGTTTGATTCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| CDS-3UTR CCA 90 bp | TTTGTGCATATGTCTGAGGACTGTGTATCTCCTTCCCAAAGAGGTCAGAGGGTACAGCCAGGGCGGCCTTaGAGGCCGGGGCTTGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: FVHMSEDCVSPSQRGQRVQPGRP*RPGLAI Trigger: AATCGCAAGCCCCGGCCTCCAAGGCCGCCCTGGCTG...TACCCTCTGACCTCTTTGGGAAGGAGATACACAGTCCTCAGACATATGCACAAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| 3UTR CAA 72 bp | ACCGCCATGAGGGTGCTGGGAATCAAACCCAGGTCCTaGGAAGAGCAGTTAGTGCTCCTAACTGCTGAGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TAMRVLGIKPRS*EEQLVLLTAEP Trigger: TGGCTCAGCAGTTAGGAGCACTAACTGCTCTTCCAAGGACCTGGGTTTGATTCCCAGCACCCTCATGGCGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| CDS-3UTR TCA 90 bp | AGGACTGTGTATCTCCTTCCCAAAGAGGTCAGAGGGTATAGAATTCCCTGGGACGTTCAGCAGCTCGGCTaGAGTGGGCCCTTTGGGCTT | + |
|
Preference number: 4 (lower is better) Translates to: RTVYLLPKEVRGYRIPWDVQQLG*SGPFGL Trigger: AAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAAC...GTCCCAGGGAATTCTATACCCTCTGACCTCTTTGGGAAGGAGATACACAGTCCT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| CDS-3UTR TCA 90 bp | CTGGGAATCAAACCCAGGTCCTTGGAAGAGCAGTTAGTGCTCCTAACTGCTGAGGTCCACAATCAGAGGTaGAACCACCTCTGCCTCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGIKPRSLEEQLVLLTAEVHNQR*NHLCLC Trigger: GCAGAGGCAGAGGTGGTTTCACCTCTGATTGTGGAC...CTCAGCAGTTAGGAGCACTAACTGCTCTTCCAAGGACCTGGGTTTGATTCCCAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| CDS-3UTR CCA 90 bp | GTATTAGGACAACGTATTGATTCCCGGGATTTAAGAAACACAGTCACAGCTGAGCAGCCAGGGCGGCCTTaGAGGCCGGGGCTTGCGATT | + |
|
Preference number: 4 (lower is better) Translates to: VLGQRIDSRDLRNTVTAEQPGRP*RPGLAI Trigger: AATCGCAAGCCCCGGCCTCCAAGGCCGCCCTGGCTG...CTCAGCTGTGACTGTGTTTCTTAAATCCCGGGAATCAATACGTTGTCCTAATAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS-3UTR CCA 90 bp | CTGGGAATCAAACCCAGGTCCTTGGAAGAGCAGTTAGTGCTCCTAACTGCTGAGAATCCAGGGTGTCCGTaGCTTTCCCCAGTTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LGIKPRSLEEQLVLLTAENPGCP*LSPVLR Trigger: TCGGAGAACTGGGGAAAGCCACGGACACCCTGGATT...CTCAGCAGTTAGGAGCACTAACTGCTCTTCCAAGGACCTGGGTTTGATTCCCAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| CDS-3UTR GCA 90 bp | GTATTAGGACAACGTATTGATTCCCGGGATTTAAGAAACACAGTCACAGCTGAGAGGGCCCCTGTTTGGTaGGGGTCAGCTCCAGCACGC | + |
|
Preference number: 4 (lower is better) Translates to: VLGQRIDSRDLRNTVTAERAPVW*GSAPAR Trigger: GCGTGCTGGAGCTGACCCGCACCAAACAGGGGCCCT...CTCAGCTGTGACTGTGTTTCTTAAATCCCGGGAATCAATACGTTGTCCTAATAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS-3UTR CCA 90 bp | TTTGTGCATATGTCTGAGGACTGTGTATCTCCTTCCCAAAGAGGTCAGAGGGTAGCAGCTCGGCTGAAGTaGGCCCTTTGGGCTTGTGCA | + |
|
Preference number: 4 (lower is better) Translates to: FVHMSEDCVSPSQRGQRVAARLK*ALWACA Trigger: TGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGC...TACCCTCTGACCTCTTTGGGAAGGAGATACACAGTCCTCAGACATATGCACAAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| CDS-3UTR CCA 90 bp | TGCCCTGAGTTAACATTAACGTTTTTATTAAAACACGTTGCCAGTCTGCTGAGACGGGCCGGGCCGGTCTaGCCTCCACCACCTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: CPELTLTFLLKHVASLLRRAGPV*PPPPCL Trigger: AAGGCAAGGTGGTGGAGGCCAGACCGGCCCGGCCCG...TCTCAGCAGACTGGCAACGTGTTTTAATAAAAACGTTAATGTTAACTCAGGGCA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS-3UTR GCA 90 bp | TGTGGGGGATGGGCACGGTGTACGCGCACTGCAGAGTGTTTGTGGACAACTTGCTCACAGTGTCTTAACTaGGTCATCTTCTCTCTTTGT | + |
|
Preference number: 4 (lower is better) Translates to: CGGWARCTRTAECLWTTCSQCLN*VIFSLC Trigger: ACAAAGAGAGAAGATGACGCAGTTAAGACACTGTGA...GCAAGTTGTCCACAAACACTCTGCAGTGCGCGTACACCGTGCCCATCCCCCACA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS-3UTR CCA 90 bp | GAACCTGTAAGAAGTTACATGTACCTCAGGAAATCAAACCACAACTTTTCTTACCGGGCCGGGCCGGTCTaGCCTCCACCACCTTGCCTT | + |
|
Preference number: 4 (lower is better) Translates to: EPVRSYMYLRKSNHNFSYRAGPV*PPPPCL Trigger: AAGGCAAGGTGGTGGAGGCCAGACCGGCCCGGCCCG...GTAAGAAAAGTTGTGGTTTGATTTCCTGAGGTACATGTAACTTCTTACAGGTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| CDS-3UTR CCA 90 bp | CTGGGAATCAAACCCAGGTCCTTGGAAGAGCAGTTAGTGCTCCTAACTGCTGAGGTGAAGAACGGAGGCTaGAACTTCAGGAGGGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: LGIKPRSLEEQLVLLTAEVKNGG*NFRREI Trigger: TATCTCCCTCCTGAAGTTCCAGCCTCCGTTCTTCAC...CTCAGCAGTTAGGAGCACTAACTGCTCTTCCAAGGACCTGGGTTTGATTCCCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| CDS-3UTR TCA 90 bp | GTATTAGGACAACGTATTGATTCCCGGGATTTAAGAAACACAGTCACAGCTGAGGGCCTCGGCTGTTCCTaGAGTGTCAGGAGCTGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: VLGQRIDSRDLRNTVTAEGLGCS*SVRSCV Trigger: GACACAGCTCCTGACACTTCAGGAACAGCCGAGGCC...CTCAGCTGTGACTGTGTTTCTTAAATCCCGGGAATCAATACGTTGTCCTAATAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS-3UTR GCA 90 bp | GTCAGTGGCCAAAGCAGGAGTTTGTGCATTTACAGATATGTATTAGGACAACGTCCGGCAGAAGAGACGTaGAGCGCTCGAGGGACTGTT | + |
|
Preference number: 4 (lower is better) Translates to: VSGQSRSLCIYRYVLGQRPAEET*SARGTV Trigger: AACAGTCCCTCGAGCGCTGCACGTCTCTTCTGCCGG...ACGTTGTCCTAATACATATCTGTAAATGCACAAACTCCTGCTTTGGCCACTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS-3UTR CCA 90 bp | TTGTGGTCTTTATTTGTGCATATGTCTGAGGACTGTGTATCTCCTTCCCAAAGAAGGAGGGAGATACTGTaGACAGTCACGGGCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LWSLFVHMSEDCVSPSQRRREIL*TVTGRA Trigger: GGCCCGGCCCGTGACTGTCCACAGTATCTCCCTCCT...TCTTTGGGAAGGAGATACACAGTCCTCAGACATATGCACAAATAAAGACCACAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| CDS-3UTR CCA 90 bp | CTGAATACAGGATCTGAAATGAATCACGTCTCACGCTATTTACATTCTGTCAGTAGGAGGGAGATACTGTaGACAGTCACGGGCCGGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LNTGSEMNHVSRYLHSVSRREIL*TVTGRA Trigger: GGCCCGGCCCGTGACTGTCCACAGTATCTCCCTCCT...ACTGACAGAATGTAAATAGCGTGAGACGTGATTCATTTCAGATCCTGTATTCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS-3UTR GCA 90 bp | TGCTGGACAGGCAGTGTGTCTTCGCCTCTCCAGTGTCCTCAGTTTCCTTGTCTTTTCCCAGTAAACTTCTaGAGAATGCCTTCGATATCT | + |
|
Preference number: 4 (lower is better) Translates to: CWTGSVSSPLQCPQFPCLFPVNF*RMPSIS Trigger: AGATATCGAAGGCATTCTGCAGAAGTTTACTGGGAA...AAGACAAGGAAACTGAGGACACTGGAGAGGCGAAGACACACTGCCTGTCCAGCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS-3UTR CCA 90 bp | GTATTAGGACAACGTATTGATTCCCGGGATTTAAGAAACACAGTCACAGCTGAGGTGAAGAACGGAGGCTaGAACTTCAGGAGGGAGATA | + |
|
Preference number: 4 (lower is better) Translates to: VLGQRIDSRDLRNTVTAEVKNGG*NFRREI Trigger: TATCTCCCTCCTGAAGTTCCAGCCTCCGTTCTTCAC...CTCAGCTGTGACTGTGTTTCTTAAATCCCGGGAATCAATACGTTGTCCTAATAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS-3UTR GCA 90 bp | GAACCTGTAAGAAGTTACATGTACCTCAGGAAATCAAACCACAACTTTTCTTACAGGCATTCCAGCTTCTaGCAGCAGCTTCTCCTTCAG | + |
|
Preference number: 4 (lower is better) Translates to: EPVRSYMYLRKSNHNFSYRHSSF*QQLLLQ Trigger: CTGAAGGAGAAGCTGCTGGCAGAAGCTGGAATGCCT...GTAAGAAAAGTTGTGGTTTGATTTCCTGAGGTACATGTAACTTCTTACAGGTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| CDS-3UTR GCA 90 bp | TTTGTGCATATGTCTGAGGACTGTGTATCTCCTTCCCAAAGAGGTCAGAGGGTATTCCCAGTAAACTTCTaGAGAATGCCTTCGATATCT | + |
|
Preference number: 4 (lower is better) Translates to: FVHMSEDCVSPSQRGQRVFPVNF*RMPSIS Trigger: AGATATCGAAGGCATTCTGCAGAAGTTTACTGGGAA...TACCCTCTGACCTCTTTGGGAAGGAGATACACAGTCCTCAGACATATGCACAAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| CDS-3UTR CCA 90 bp | AGCACCCAACTGTTTATATTAGGTTTGCATTACATTAACCACAATAAAACCGTCAATCCAGGGTGTCCGTaGCTTTCCCCAGTTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: STQLFILGLHYINHNKTVNPGCP*LSPVLR Trigger: TCGGAGAACTGGGGAAAGCCACGGACACCCTGGATT...GACGGTTTTATTGTGGTTAATGTAATGCAAACCTAATATAAACAGTTGGGTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| 3UTR CAA 72 bp | ATGCTTTTTGTCTTAGCTACTTTAACATCAATTAACTaGCAGTTCACAGCGGAGGGGCCGGCCAACAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: MLFVLATLTSIN*QFTAEGPANRN Trigger: ATTTCTGTTGGCCGGCCCCTCCGCTGTGAACTGCAAGTTAATTGATGTTAAAGTAGCTAAGACAAAAAGCAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
||
| CDS-3UTR CCA 90 bp | AGCACCCAACTGTTTATATTAGGTTTGCATTACATTAACCACAATAAAACCGTCCCACAGCTTATAACCTaGTCACTGGAGTTGTCAGAT | + |
|
Preference number: 4 (lower is better) Translates to: STQLFILGLHYINHNKTVPQLIT*SLELSD Trigger: ATCTGACAACTCCAGTGACCAGGTTATAAGCTGTGG...GACGGTTTTATTGTGGTTAATGTAATGCAAACCTAATATAAACAGTTGGGTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| 3UTR CAA 72 bp | CGCTATTTACATTCTGTCAGTGGCCAAAGCAGGAGTTaGTGCATTTACAGATATGTATTAGGACAACGTATT | + |
|
Preference number: 4 (lower is better) Translates to: RYLHSVSGQSRS*CIYRYVLGQRI Trigger: AATACGTTGTCCTAATACATATCTGTAAATGCACAAACTCCTGCTTTGGCCACTGACAGAATGTAAATAGCG 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
||
| CDS GCA 90 bp | AGCGACATGAGCTTAGCAGCCAGGGCGGCCTTGGAGGCCGGGGCTTaGGATTCAGTCCTGGCCGCTTCCGCCACCGATGCTGCTACAGAG | + |
|
Preference number: 5 (lower is better) Translates to: SDMSLAARAALEAGA*DSVLAASATDAATE Trigger: CTCTGTAGCAGCATCGGTGGCGGAAGCGGCCAGGACTGAATCGCAAGCCCCGGCCTCCAAGGCCGCCCTGGCTGCTAAGCTCATGTCGCT 66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 ENSMUST00000238107.2 |
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| CDS TCA 90 bp | CATCGATGGTCCACCTGTCTTCGGGGAGGGCGTGCTGTGCAAGTGTaGAGGGCCCCTGTTTGGTGCGGGTCAGCTCCAGCACGCTGGCAC | + |
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Preference number: 5 (lower is better) Translates to: HRWSTCLRGGRAVQV*RAPVWCGSAPARWH Trigger: GTGCCAGCGTGCTGGAGCTGACCCGCACCAAACAGGGGCCCTTCACACTTGCACAGCACGCCCTCCCCGAAGACAGGTGGACCATCGATG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS CCA 90 bp | CCCAGCGTGAAGAACGGAGGCTGGAACTTCAGGAGGGAGATACTGTaGACAGTCACGGGCCGGGCCGGTCTGGCCTCCACCACCTTGCCT | + |
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Preference number: 5 (lower is better) Translates to: PSVKNGGWNFRREIL*TVTGRAGLASTTLP Trigger: AGGCAAGGTGGTGGAGGCCAGACCGGCCCGGCCCGTGACTGTCCACAGTATCTCCCTCCTGAAGTTCCAGCCTCCGTTCTTCACGCTGGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| CDS GCA 90 bp | TTCAGCCGGTTCAGCAGCTCGGCTGAAGTGGGCCCTTTGGGCTTGTaGACGGCGAACACGCCGCTCAGCGACATGAGCTTAGCAGCCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FSRFSSSAEVGPLGL*TANTPLSDMSLAAR Trigger: CCTGGCTGCTAAGCTCATGTCGCTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAACCGGCTGAA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 ENSMUST00000238107.2 |
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| CDS CCA 90 bp | TCCAGCGTGAAGAACGGAGGCTGGAACTTCAGGAGGGAGATACTGTaGACAGTCACGGGCCGGGCCGGTCTGGCCTCCACCACCTTGCCT | + |
|
Preference number: 5 (lower is better) Translates to: SSVKNGGWNFRREIL*TVTGRAGLASTTLP Trigger: AGGCAAGGTGGTGGAGGCCAGACCGGCCCGGCCCGTGACTGTCCACAGTATCTCCCTCCTGAAGTTCCAGCCTCCGTTCTTCACGCTGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS GCA 90 bp | TTCGATGTCATCGATGGTCCACCTGTCTTCGGGGAGGGCGTGCTGTaGAAGTGTGAAGGGCCCCTGTTTGGTGCGGGTCAGCTCCAGCAC | + |
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Preference number: 5 (lower is better) Translates to: FDVIDGPPVFGEGVL*KCEGPLFGAGQLQH Trigger: GTGCTGGAGCTGACCCGCACCAAACAGGGGCCCTTCACACTTGCACAGCACGCCCTCCCCGAAGACAGGTGGACCATCGATGACATCGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS CCA 90 bp | ACAGCCAGGGCTATACAGAGAAACCCCAGCGTGAAGAACGGAGGCTaGAACTTCAGGAGGGAGATACTGTGGACAGTCACGGGCCGGGCC | + |
|
Preference number: 5 (lower is better) Translates to: TARAIQRNPSVKNGG*NFRREILWTVTGRA Trigger: GGCCCGGCCCGTGACTGTCCACAGTATCTCCCTCCTGAAGTTCCAGCCTCCGTTCTTCACGCTGGGGTTTCTCTGTATAGCCCTGGCTGT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| CDS-3UTR CAA 90 bp | GCATATGTAGCAGAGGACAGCCTTGTAGGGCATCAATGGGAGGAGAGGCCCTTGGTGAAGGGCCCCTGTTaGGTGCGGGTCAGCTCCAGC | + |
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Preference number: 5 (lower is better) Translates to: AYVAEDSLVGHQWEERPLVKGPC*VRVSSS Trigger: GCTGGAGCTGACCCGCACCAAACAGGGGCCCTTCAC...CAAGGGCCTCTCCTCCCATTGATGCCCTACAAGGCTGTCCTCTGCTACATATGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS-3UTR CAA 90 bp | CTGGGAATCAAACCCAGGTCCTTGGAAGAGCAGTTAGTGCTCCTAACTGCTGAGGTGGGCCCTTTGGGCTaGTGCACGGCGAACACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: LGIKPRSLEEQLVLLTAEVGPLG*CTANTP Trigger: CGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCAC...CTCAGCAGTTAGGAGCACTAACTGCTCTTCCAAGGACCTGGGTTTGATTCCCAG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| CDS-3UTR CAA 90 bp | CGCCATGAGGGTGCTGGGAATCAAACCCAGGTCCTTGGAAGAGCAGTTAGTGCTGCTGAAGTGGGCCCTTaGGGCTTGTGCACGGCGAAC | + |
|
Preference number: 5 (lower is better) Translates to: RHEGAGNQTQVLGRAVSAAEVGP*GLCTAN Trigger: GTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGC...AGCACTAACTGCTCTTCCAAGGACCTGGGTTTGATTCCCAGCACCCTCATGGCG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| CDS GCA 90 bp | TACTGTGGACAGTCACGGGCCGGGCCGGTCTGGCCTCCACCACCTTaGCTTTCTTCATTAGCGTTGAGAGTCTCTGCCCATCCTTCTTCA | + |
|
Preference number: 5 (lower is better) Translates to: YCGQSRAGPVWPPPP*LSSLALRVSAHPSS Trigger: TGAAGAAGGATGGGCAGAGACTCTCAACGCTAATGAAGAAAGGCAAGGTGGTGGAGGCCAGACCGGCCCGGCCCGTGACTGTCCACAGTA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 |
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| CDS CCA 90 bp | ACTTCAGGAGGGAGATACTGTGGACAGTCACGGGCCGGGCCGGTCTaGCCTCCACCACCTTGCCTTTCTTCATTAGCGTTGAGAGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: TSGGRYCGQSRAGPV*PPPPCLSSLALRVS Trigger: AGAGACTCTCAACGCTAATGAAGAAAGGCAAGGTGGTGGAGGCCAGACCGGCCCGGCCCGTGACTGTCCACAGTATCTCCCTCCTGAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 |
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| CDS-3UTR CAA 90 bp | TTTGTGCATATGTCTGAGGACTGTGTATCTCCTTCCCAAAGAGGTCAGAGGGTAGCAGCCAGGGCGGCCTaGGAGGCCGGGGCTTGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: FVHMSEDCVSPSQRGQRVAARAA*EAGACD Trigger: ATCGCAAGCCCCGGCCTCCAAGGCCGCCCTGGCTGC...TACCCTCTGACCTCTTTGGGAAGGAGATACACAGTCCTCAGACATATGCACAAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| CDS-3UTR CAA 90 bp | GAGAGCCGCCTGCTGTGGGTGGGTGCAGAATCTACACTCCGTGCCTGCTGGACAGTCTGCTTTTGCCTCTaGTTCCATTCTGGAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: ESRLLWVGAESTLRACWTVCFCL*FHSGEG Trigger: GCCTTCTCCAGAATGGAACAAGAGGCAAAAGCAGAC...TGTCCAGCAGGCACGGAGTGTAGATTCTGCACCCACCCACAGCAGGCGGCTCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS TCA 90 bp | GCTCCAGCACGCTGGCACAGGAAGAGAGCTCTTTGCCGATGTCACTaGCCAGGCTCCGGATGTAAAAGCCTCCTCCGCATTCAACATCCA | + |
|
Preference number: 5 (lower is better) Translates to: APARWHRKRALCRCH*PGSGCKSLLRIQHP Trigger: TGGATGTTGAATGCGGAGGAGGCTTTTACATCCGGAGCCTGGTCAGTGACATCGGCAAAGAGCTCTCTTCCTGTGCCAGCGTGCTGGAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS-3UTR CAA 90 bp | TGTGGGGGATGGGCACGGTGTACGCGCACTGCAGAGTGTTTGTGGACAACTTGCCTGGCCTCCACCACCTaGCCTTTCTTCATTAGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: CGGWARCTRTAECLWTTCLASTT*PFFISV Trigger: AACGCTAATGAAGAAAGGCAAGGTGGTGGAGGCCAG...GCAAGTTGTCCACAAACACTCTGCAGTGCGCGTACACCGTGCCCATCCCCCACA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS TCA 90 bp | CCAGGCTCCGGATGTAAAAGCCTCCTCCGCATTCAACATCCAGCGTaGAGAACGGAGGCTGGAACTTCAGGAGGGAGATACTGTGGACAG | + |
|
Preference number: 5 (lower is better) Translates to: PGSGCKSLLRIQHPA*RTEAGTSGGRYCGQ Trigger: CTGTCCACAGTATCTCCCTCCTGAAGTTCCAGCCTCCGTTCTTCACGCTGGATGTTGAATGCGGAGGAGGCTTTTACATCCGGAGCCTGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS GCA 90 bp | TGCGCTGCACTGTCCAGCGTCCCTCCGTGTCCGACTTTCAATGTCTaGTTTTGCCTCTTGTTCCATTCTGGAGAAGGCATTCCAGCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: CAALSSVPPCPTFNV*FCLLFHSGEGIPAS Trigger: AGAAGCTGGAATGCCTTCTCCAGAATGGAACAAGAGGCAAAAGCAGACATTGAAAGTCGGACACGGAGGGACGCTGGACAGTGCAGCGCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 |
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| CDS-3UTR CAA 90 bp | TGCCCTGAGTTAACATTAACGTTTTTATTAAAACACGTTGCCAGTCTGCTGAGAGCAGCCAGGGCGGCCTaGGAGGCCGGGGCTTGCGAT | + |
|
Preference number: 5 (lower is better) Translates to: CPELTLTFLLKHVASLLRAARAA*EAGACD Trigger: ATCGCAAGCCCCGGCCTCCAAGGCCGCCCTGGCTGC...TCTCAGCAGACTGGCAACGTGTTTTAATAAAAACGTTAATGTTAACTCAGGGCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS-3UTR CAA 90 bp | TGCCCTGAGTTAACATTAACGTTTTTATTAAAACACGTTGCCAGTCTGCTGAGAGTGGGCCCTTTGGGCTaGTGCACGGCGAACACGCCG | + |
|
Preference number: 5 (lower is better) Translates to: CPELTLTFLLKHVASLLRVGPLG*CTANTP Trigger: CGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCAC...TCTCAGCAGACTGGCAACGTGTTTTAATAAAAACGTTAATGTTAACTCAGGGCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS-3UTR CAA 90 bp | CTGAGTACAGCCCACCAGCACCTTCCAGCAGCCATAGGCTCTGCAAACACACAGTTTCAATGTCTGCTTTaGCCTCTTGTTCCATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: LSTAHQHLPAAIGSANTQFQCLL*PLVPFW Trigger: CCAGAATGGAACAAGAGGCAAAAGCAGACATTGAAA...CTGTGTGTTTGCAGAGCCTATGGCTGCTGGAAGGTGCTGGTGGGCTGTACTCAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS-3UTR CAA 90 bp | CGAACCGCCATGAGGGTGCTGGGAATCAAACCCAGGTCCTTGGAAGAGCAGTTATTTCAATGTCTGCTTTaGCCTCTTGTTCCATTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: RTAMRVLGIKPRSLEEQLFQCLL*PLVPFW Trigger: CCAGAATGGAACAAGAGGCAAAAGCAGACATTGAAA...TAACTGCTCTTCCAAGGACCTGGGTTTGATTCCCAGCACCCTCATGGCGGTTCG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| CDS-3UTR CAA 90 bp | CCTGAACCTGTAAGAAGTTACATGTACCTCAGGAAATCAAACCACAACTTTTCTCTGGCCTCCACCACCTaGCCTTTCTTCATTAGCGTT | + |
|
Preference number: 5 (lower is better) Translates to: PEPVRSYMYLRKSNHNFSLASTT*PFFISV Trigger: AACGCTAATGAAGAAAGGCAAGGTGGTGGAGGCCAG...AGAAAAGTTGTGGTTTGATTTCCTGAGGTACATGTAACTTCTTACAGGTTCAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| CDS-3UTR CAA 90 bp | GAACCTGTAAGAAGTTACATGTACCTCAGGAAATCAAACCACAACTTTTCTTACGTCTGCTTTTGCCTCTaGTTCCATTCTGGAGAAGGC | + |
|
Preference number: 5 (lower is better) Translates to: EPVRSYMYLRKSNHNFSYVCFCL*FHSGEG Trigger: GCCTTCTCCAGAATGGAACAAGAGGCAAAAGCAGAC...GTAAGAAAAGTTGTGGTTTGATTTCCTGAGGTACATGTAACTTCTTACAGGTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026072.5 |
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| CDS CAA 90 bp | GCGAACACGCCGCTCAGCGACATGAGCTTAGCAGCCAGGGCGGCCTaGGAGGCCGGGGCTTGCGATTCAGTCCTGGCCGCTTCCGCCACC | + |
|
Preference number: 6 (lower is better) Translates to: ANTPLSDMSLAARAA*EAGACDSVLAASAT Trigger: GGTGGCGGAAGCGGCCAGGACTGAATCGCAAGCCCCGGCCTCCAAGGCCGCCCTGGCTGCTAAGCTCATGTCGCTGAGCGGCGTGTTCGC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 ENSMUST00000238107.2 |
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| CDS CCA 72 bp | GGGCGGCCTTGGAGGCCGGGGCTTGCGATTCAGTCCTaGCCGCTTCCGCCACCGATGCTGCTACAGAGGCCT | + |
|
Preference number: 6 (lower is better) Translates to: GRPWRPGLAIQS*PLPPPMLLQRP Trigger: AGGCCTCTGTAGCAGCATCGGTGGCGGAAGCGGCCAGGACTGAATCGCAAGCCCCGGCCTCCAAGGCCGCCC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 ENSMUST00000238107.2 |
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| CDS GCA 72 bp | AGCTTAGCAGCCAGGGCGGCCTTGGAGGCCGGGGCTTaGGATTCAGTCCTGGCCGCTTCCGCCACCGATGCT | + |
|
Preference number: 6 (lower is better) Translates to: SLAARAALEAGA*DSVLAASATDA Trigger: AGCATCGGTGGCGGAAGCGGCCAGGACTGAATCGCAAGCCCCGGCCTCCAAGGCCGCCCTGGCTGCTAAGCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 ENSMUST00000238107.2 |
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| CDS CAA 72 bp | CCGCTCAGCGACATGAGCTTAGCAGCCAGGGCGGCCTaGGAGGCCGGGGCTTGCGATTCAGTCCTGGCCGCT | + |
|
Preference number: 6 (lower is better) Translates to: PLSDMSLAARAA*EAGACDSVLAA Trigger: AGCGGCCAGGACTGAATCGCAAGCCCCGGCCTCCAAGGCCGCCCTGGCTGCTAAGCTCATGTCGCTGAGCGG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 ENSMUST00000238107.2 |
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| CDS CCA 72 bp | TCAGCCGGTTCAGCAGCTCGGCTGAAGTGGGCCCTTTaGGCTTGTGCACGGCGAACACGCCGCTCAGCGACA | + |
|
Preference number: 6 (lower is better) Translates to: SAGSAARLKWAL*ACARRTRRSAT Trigger: TGTCGCTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAACCGGCTGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 ENSMUST00000238107.2 |
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| CDS CCA 72 bp | GCTTCTCCTTCAGCCGGTTCAGCAGCTCGGCTGAAGTaGGCCCTTTGGGCTTGTGCACGGCGAACACGCCGC | + |
|
Preference number: 6 (lower is better) Translates to: ASPSAGSAARLK*ALWACARRTRR Trigger: GCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAACCGGCTGAAGGAGAAGC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 ENSMUST00000238107.2 |
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| CDS CAA 72 bp | TTCAGCCGGTTCAGCAGCTCGGCTGAAGTGGGCCCTTaGGGCTTGTGCACGGCGAACACGCCGCTCAGCGAC | + |
|
Preference number: 6 (lower is better) Translates to: FSRFSSSAEVGP*GLCTANTPLSD Trigger: GTCGCTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAACCGGCTGAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 ENSMUST00000238107.2 |
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| CDS CAA 72 bp | GGGAGGGCGTGCTGTGCAAGTGTGAAGGGCCCCTGTTaGGTGCGGGTCAGCTCCAGCACGCTGGCACAGGAA | + |
|
Preference number: 6 (lower is better) Translates to: GRACCASVKGPC*VRVSSSTLAQE Trigger: TTCCTGTGCCAGCGTGCTGGAGCTGACCCGCACCAAACAGGGGCCCTTCACACTTGCACAGCACGCCCTCCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS TCA 72 bp | TCCACCTGTCTTCGGGGAGGGCGTGCTGTGCAAGTGTaGAGGGCCCCTGTTTGGTGCGGGTCAGCTCCAGCA | + |
|
Preference number: 6 (lower is better) Translates to: STCLRGGRAVQV*RAPVWCGSAPA Trigger: TGCTGGAGCTGACCCGCACCAAACAGGGGCCCTTCACACTTGCACAGCACGCCCTCCCCGAAGACAGGTGGA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS CAA 90 bp | TCCTTCAGCCGGTTCAGCAGCTCGGCTGAAGTGGGCCCTTTGGGCTaGTGCACGGCGAACACGCCGCTCAGCGACATGAGCTTAGCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SFSRFSSSAEVGPLG*CTANTPLSDMSLAA Trigger: GGCTGCTAAGCTCATGTCGCTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAACCGGCTGAAGGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 ENSMUST00000238107.2 |
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| CDS CAA 90 bp | CTGTCTTCGGGGAGGGCGTGCTGTGCAAGTGTGAAGGGCCCCTGTTaGGTGCGGGTCAGCTCCAGCACGCTGGCACAGGAAGAGAGCTCT | + |
|
Preference number: 6 (lower is better) Translates to: LSSGRACCASVKGPC*VRVSSSTLAQEESS Trigger: AGAGCTCTCTTCCTGTGCCAGCGTGCTGGAGCTGACCCGCACCAAACAGGGGCCCTTCACACTTGCACAGCACGCCCTCCCCGAAGACAG 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS GCA 72 bp | ATCGATGGTCCACCTGTCTTCGGGGAGGGCGTGCTGTaGAAGTGTGAAGGGCCCCTGTTTGGTGCGGGTCAG | + |
|
Preference number: 6 (lower is better) Translates to: IDGPPVFGEGVL*KCEGPLFGAGQ Trigger: CTGACCCGCACCAAACAGGGGCCCTTCACACTTGCACAGCACGCCCTCCCCGAAGACAGGTGGACCATCGAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS CAA 90 bp | AGCTTCTCCTTCAGCCGGTTCAGCAGCTCGGCTGAAGTGGGCCCTTaGGGCTTGTGCACGGCGAACACGCCGCTCAGCGACATGAGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: SFSFSRFSSSAEVGP*GLCTANTPLSDMSL Trigger: TAAGCTCATGTCGCTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAACCGGCTGAAGGAGAAGCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 ENSMUST00000238107.2 |
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| CDS GCA 72 bp | TTCAGCAGCTCGGCTGAAGTGGGCCCTTTGGGCTTGTaGACGGCGAACACGCCGCTCAGCGACATGAGCTTA | + |
|
Preference number: 6 (lower is better) Translates to: FSSSAEVGPLGL*TANTPLSDMSL Trigger: TAAGCTCATGTCGCTGAGCGGCGTGTTCGCCGTGCACAAGCCCAAAGGGCCCACTTCAGCCGAGCTGCTGAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 ENSMUST00000238107.2 |
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| CDS CCA 72 bp | GGGAGATACTGTGGACAGTCACGGGCCGGGCCGGTCTaGCCTCCACCACCTTGCCTTTCTTCATTAGCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: GRYCGQSRAGPV*PPPPCLSSLAL Trigger: CAACGCTAATGAAGAAAGGCAAGGTGGTGGAGGCCAGACCGGCCCGGCCCGTGACTGTCCACAGTATCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 |
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| CDS CCA 72 bp | ACGTGCAGCGCTCGAGGGACTGTTCGATGTCATCGATaGTCCACCTGTCTTCGGGGAGGGCGTGCTGTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: TCSARGTVRCHR*STCLRGGRAVQ Trigger: TTGCACAGCACGCCCTCCCCGAAGACAGGTGGACCATCGATGACATCGAACAGTCCCTCGAGCGCTGCACGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000026073.14 |
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| CDS CAA 72 bp | ACAGTCACGGGCCGGGCCGGTCTGGCCTCCACCACCTaGCCTTTCTTCATTAGCGTTGAGAGTCTCTGCCCA | + |
|
Preference number: 6 (lower is better) Translates to: TVTGRAGLASTT*PFFISVESLCP Trigger: TGGGCAGAGACTCTCAACGCTAATGAAGAAAGGCAAGGTGGTGGAGGCCAGACCGGCCCGGCCCGTGACTGT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 |
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| CDS CAA 90 bp | TCCAGCGTCCCTCCGTGTCCGACTTTCAATGTCTGCTTTTGCCTCTaGTTCCATTCTGGAGAAGGCATTCCAGCTTCTGCCAGCAGCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SSVPPCPTFNVCFCL*FHSGEGIPASASSF Trigger: GAAGCTGCTGGCAGAAGCTGGAATGCCTTCTCCAGAATGGAACAAGAGGCAAAAGCAGACATTGAAAGTCGGACACGGAGGGACGCTGGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 |
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| CDS GCA 72 bp | CTGTCCAGCGTCCCTCCGTGTCCGACTTTCAATGTCTaGTTTTGCCTCTTGTTCCATTCTGGAGAAGGCATT | + |
|
Preference number: 6 (lower is better) Translates to: LSSVPPCPTFNV*FCLLFHSGEGI Trigger: AATGCCTTCTCCAGAATGGAACAAGAGGCAAAAGCAGACATTGAAAGTCGGACACGGAGGGACGCTGGACAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 |
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| CDS CAA 72 bp | ACCTCTTGGACCCCGACAACATACTGGTCAACATTTTaGTTCCTCTTCCAATCCCAACCACTGCCAGCAGCT | + |
|
Preference number: 6 (lower is better) Translates to: TSWTPTTYWSTF*FLFQSQPLPAA Trigger: AGCTGCTGGCAGTGGTTGGGATTGGAAGAGGAACAAAAATGTTGACCAGTATGTTGTCGGGGTCCAAGAGGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000238107.2 |
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| CDS CAA 90 bp | GAGTCTCTGCCCATCCTTCTTCAGCGCAGAATAGAGCGGGGGTACTaGCATTATATTCCCAGTAAACTTCTGCAGAATGCCTTCGATATC | + |
|
Preference number: 6 (lower is better) Translates to: ESLPILLQRRIERGY*HYIPSKLLQNAFDI Trigger: GATATCGAAGGCATTCTGCAGAAGTTTACTGGGAATATAATGCAAGTACCCCCGCTCTATTCTGCGCTGAAGAAGGATGGGCAGAGACTC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 |
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| CDS GCA 72 bp | AGCGGGGGTACTTGCATTATATTCCCAGTAAACTTCTaGAGAATGCCTTCGATATCTTCTCGTGTTATTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SGGTCIIFPVNF*RMPSISSRVIL Trigger: TAAAATAACACGAGAAGATATCGAAGGCATTCTGCAGAAGTTTACTGGGAATATAATGCAAGTACCCCCGCT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000026072.5 ENSMUST00000026073.14 |
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