Pregenerated sensors for TRPV6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029868Ensembl transcript IDs: ENSMUST00000031902.7
Found 109 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCTGGGAGGAGACAGGTGCCTGAGATAGGAAGCCTGTCTTTAAAGTaGTCTGGTGTGCAGGGGAGCTTCCATAAGAGAACAAGGAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: PGRRQVPEIGSLSLK*SGVQGSFHKRTRKA Trigger: AGCTTTCCTTGTTCTCTTATGGAAGCTCCCCTGCACACCAGAGCACTTTAAAGACAGGCTTCCTATCTCAGGCACCTGTCTCCTCCCAGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR GCA 90 bp | AAGGAAAGCTTGGATGAGGCACGGACCACAGAGTCGTCTTCCTTTTaGTCCAAGATAAAGGAGTTGTGGAGCCCTGGAGCATTTATTCCC | + |
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Preference number: 1 (lower is better) Translates to: KESLDEARTTESSSF*SKIKELWSPGAFIP Trigger: GGGAATAAATGCTCCAGGGCTCCACAACTCCTTTATCTTGGAGCAAAAGGAAGACGACTCTGTGGTCCGTGCCTCATCCAAGCTTTCCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR CCA 90 bp | AGAGTCGTCTTCCTTTTGCTCCAAGATAAAGGAGTTGTGGAGCCCTaGAGCATTTATTCCCAGTGTACATTCCTTGGCATGTTCCTCTTC | + |
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Preference number: 1 (lower is better) Translates to: RVVFLLLQDKGVVEP*SIYSQCTFLGMFLF Trigger: GAAGAGGAACATGCCAAGGAATGTACACTGGGAATAAATGCTCCAGGGCTCCACAACTCCTTTATCTTGGAGCAAAAGGAAGACGACTCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR CCA 90 bp | TATTCCCAGTGTACATTCCTTGGCATGTTCCTCTTCCTTCTCCCTTaGACTCGCAGGATGACCTTAGCTGTCTTTCTTTCATTCTGTTCT | + |
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Preference number: 1 (lower is better) Translates to: YSQCTFLGMFLFLLP*TRRMTLAVFLSFCS Trigger: AGAACAGAATGAAAGAAAGACAGCTAAGGTCATCCTGCGAGTCCAAGGGAGAAGGAAGAGGAACATGCCAAGGAATGTACACTGGGAATA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR-3UTR CCA 90 bp | AGCTTCCCCACCCCTAGACTGGTGCCTGTATCTGTCCATCACACACCTTCCCACAGAACAAGGAAAGCTTaGATGAGGCACGGACCACAG | + |
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Preference number: 2 (lower is better) Translates to: SFPTPRLVPVSVHHTPSHRTRKA*MRHGPQ Trigger: CTGTGGTCCGTGCCTCATCCAAGCTTTCCTTGTTCT...GTGGGAAGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGGGGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR-3UTR CCA 90 bp | CTCCCACTTATTAGACCTGGGAGGAGACAGGTGCCTGAGATAGGAAGCCTGTCTCTCTTCCTTCTCCCTTaGACTCGCAGGATGACCTTA | + |
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Preference number: 2 (lower is better) Translates to: LPLIRPGRRQVPEIGSLSLFLLP*TRRMTL Trigger: TAAGGTCATCCTGCGAGTCCAAGGGAGAAGGAAGAG...AGACAGGCTTCCTATCTCAGGCACCTGTCTCCTCCCAGGTCTAATAAGTGGGAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR-3UTR CCA 90 bp | GAAGAGTTCTGTGCCCTCCCACTTATTAGACCTGGGAGGAGACAGGTGCCTGAGCCAGTGTACATTCCTTaGCATGTTCCTCTTCCTTCT | + |
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Preference number: 2 (lower is better) Translates to: EEFCALPLIRPGRRQVPEPVYIP*HVPLPS Trigger: AGAAGGAAGAGGAACATGCCAAGGAATGTACACTGG...CTCAGGCACCTGTCTCCTCCCAGGTCTAATAAGTGGGAGGGCACAGAACTCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR CAA 90 bp | GCACGGACCACAGAGTCGTCTTCCTTTTGCTCCAAGATAAAGGAGTaGTGGAGCCCTGGAGCATTTATTCCCAGTGTACATTCCTTGGCA | + |
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Preference number: 2 (lower is better) Translates to: ARTTESSSFCSKIKE*WSPGAFIPSVHSLA Trigger: TGCCAAGGAATGTACACTGGGAATAAATGCTCCAGGGCTCCACAACTCCTTTATCTTGGAGCAAAAGGAAGACGACTCTGTGGTCCGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR-3UTR TCA 90 bp | GACTGGTGCCTGTATCTGTCCATCACACACCTTCCCACAATCTCAGTGTTCTCCTCTTTCATTCTGTTCTaGTGCTTGGTGAGAGCCAAC | + |
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Preference number: 2 (lower is better) Translates to: DWCLYLSITHLPTISVFSSFILF*CLVRAN Trigger: GTTGGCTCTCACCAAGCATCAGAACAGAATGAAAGA...GGAGAACACTGAGATTGTGGGAAGGTGTGTGATGGACAGATACAGGCACCAGTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR-3UTR GCA 90 bp | CCACCCCTAGACTGGTGCCTGTATCTGTCCATCACACACCTTCCCACAATCTCAGAGTCGTCTTCCTTTTaGTCCAAGATAAAGGAGTTG | + |
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Preference number: 2 (lower is better) Translates to: PPLDWCLYLSITHLPTISESSSF*SKIKEL Trigger: CAACTCCTTTATCTTGGAGCAAAAGGAAGACGACTC...TGAGATTGTGGGAAGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR CCA 72 bp | GTGGCAAGGCTCAGTCTAGCTTCCCCACCCCTAGACTaGTGCCTGTATCTGTCCATCACACACCTTCCCACA | + |
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Preference number: 3 (lower is better) Translates to: VARLSLASPPLD*CLYLSITHLPT Trigger: TGTGGGAAGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGGGGAAGCTAGACTGAGCCTTGCCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR GCA 72 bp | GCAAGGCTCAGTCTAGCTTCCCCACCCCTAGACTGGTaGCTGTATCTGTCCATCACACACCTTCCCACAATC | + |
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Preference number: 3 (lower is better) Translates to: ARLSLASPPLDW*LYLSITHLPTI Trigger: GATTGTGGGAAGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGGGGAAGCTAGACTGAGCCTTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR-3UTR CAA 90 bp | AGCTTCCCCACCCCTAGACTGGTGCCTGTATCTGTCCATCACACACCTTCCCACCCCAGTGTACATTCCTaGGCATGTTCCTCTTCCTTC | + |
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Preference number: 3 (lower is better) Translates to: SFPTPRLVPVSVHHTPSHPSVHS*ACSSSF Trigger: GAAGGAAGAGGAACATGCCAAGGAATGTACACTGGG...GTGGGAAGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGGGGAAGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR-3UTR CAA 90 bp | CCACCCCTAGACTGGTGCCTGTATCTGTCCATCACACACCTTCCCACAATCTCAGAGAACAAGGAAAGCTaGGATGAGGCACGGACCACA | + |
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Preference number: 3 (lower is better) Translates to: PPLDWCLYLSITHLPTISENKES*DEARTT Trigger: TGTGGTCCGTGCCTCATCCAAGCTTTCCTTGTTCTC...TGAGATTGTGGGAAGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR GCA 72 bp | TTGGATGAGGCACGGACCACAGAGTCGTCTTCCTTTTaGTCCAAGATAAAGGAGTTGTGGAGCCCTGGAGCA | + |
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Preference number: 3 (lower is better) Translates to: LDEARTTESSSF*SKIKELWSPGA Trigger: TGCTCCAGGGCTCCACAACTCCTTTATCTTGGAGCAAAAGGAAGACGACTCTGTGGTCCGTGCCTCATCCAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR TCA 72 bp | AGGGGAGCTTCCATAAGAGAACAAGGAAAGCTTGGATaGGGCACGGACCACAGAGTCGTCTTCCTTTTGCTC | + |
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Preference number: 3 (lower is better) Translates to: RGASIREQGKLG*GTDHRVVFLLL Trigger: GAGCAAAAGGAAGACGACTCTGTGGTCCGTGCCTCATCCAAGCTTTCCTTGTTCTCTTATGGAAGCTCCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR CCA 72 bp | GTGCAGGGGAGCTTCCATAAGAGAACAAGGAAAGCTTaGATGAGGCACGGACCACAGAGTCGTCTTCCTTTT | + |
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Preference number: 3 (lower is better) Translates to: VQGSFHKRTRKA*MRHGPQSRLPF Trigger: AAAAGGAAGACGACTCTGTGGTCCGTGCCTCATCCAAGCTTTCCTTGTTCTCTTATGGAAGCTCCCCTGCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR GCA 72 bp | AGACAGGTGCCTGAGATAGGAAGCCTGTCTTTAAAGTaGTCTGGTGTGCAGGGGAGCTTCCATAAGAGAACA | + |
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Preference number: 3 (lower is better) Translates to: RQVPEIGSLSLK*SGVQGSFHKRT Trigger: TGTTCTCTTATGGAAGCTCCCCTGCACACCAGAGCACTTTAAAGACAGGCTTCCTATCTCAGGCACCTGTCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR CCA 72 bp | TTCCTTTTGCTCCAAGATAAAGGAGTTGTGGAGCCCTaGAGCATTTATTCCCAGTGTACATTCCTTGGCATG | + |
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Preference number: 3 (lower is better) Translates to: FLLLQDKGVVEP*SIYSQCTFLGM Trigger: CATGCCAAGGAATGTACACTGGGAATAAATGCTCCAGGGCTCCACAACTCCTTTATCTTGGAGCAAAAGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | GCTTCCCCACCCCTAGACTGGTGCCTGTATCTGTCCATCACACACCTTCCCACAATGCCAGACCCCAACTaGGCTCGACCCTGGGGCCAC | + |
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Preference number: 4 (lower is better) Translates to: ASPPLDWCLYLSITHLPTMPDPN*ARPWGH Trigger: GTGGCCCCAGGGTCGAGCCCAGTTGGGGTCTGGCAT...TGTGGGAAGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGGGGAAGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | CCCAGTGTACATTCCTTGGCATGTTCCTCTTCCTTCTCCCTTGGACTCGCAGGAACCCTGGGGCCACATTaGCACCCCCAAGAGCCGGCC | + |
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Preference number: 4 (lower is better) Translates to: PSVHSLACSSSFSLGLAGTLGPH*HPQEPA Trigger: GGCCGGCTCTTGGGGGTGCCAATGTGGCCCCAGGGT...TCCTGCGAGTCCAAGGGAGAAGGAAGAGGAACATGCCAAGGAATGTACACTGGG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | GGCAAGGCTCAGTCTAGCTTCCCCACCCCTAGACTGGTGCCTGTATCTGTCCATTTAACCCCTTCTCCTTaGGCAGGGACCACCCCATGG | + |
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Preference number: 4 (lower is better) Translates to: GKAQSSFPTPRLVPVSVHLTPSP*AGTTPW Trigger: CCATGGGGTGGTCCCTGCCCAAGGAGAAGGGGTTAA...ATGGACAGATACAGGCACCAGTCTAGGGGTGGGGAAGCTAGACTGAGCCTTGCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR TCA 90 bp | AGACAGGTGCCTGAGATAGGAAGCCTGTCTTTAAAGTGCTCTGGTGTGCAGGGGTGCTCGTCTCGGCTCTaGGCCCAGGACTCTTGTCTG | + |
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Preference number: 4 (lower is better) Translates to: RQVPEIGSLSLKCSGVQGCSSRL*AQDSCL Trigger: CAGACAAGAGTCCTGGGCTCAGAGCCGAGACGAGCA...CCCCTGCACACCAGAGCACTTTAAAGACAGGCTTCCTATCTCAGGCACCTGTCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR GCA 90 bp | GGCAAGGCTCAGTCTAGCTTCCCCACCCCTAGACTGGTGCCTGTATCTGTCCATTCCCAGATCCTCTTCTaGTGCAGCAGGTTCTGCTCG | + |
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Preference number: 4 (lower is better) Translates to: GKAQSSFPTPRLVPVSVHSQILF*CSRFCS Trigger: CGAGCAGAACCTGCTGCAGCAGAAGAGGATCTGGGA...ATGGACAGATACAGGCACCAGTCTAGGGGTGGGGAAGCTAGACTGAGCCTTGCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR GCA 90 bp | CAGTCTAGCTTCCCCACCCCTAGACTGGTGCCTGTATCTGTCCATCACACACCTTCACAGCCCCAACGATaGTCACGAGTTCCCCCACCA | + |
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Preference number: 4 (lower is better) Translates to: QSSFPTPRLVPVSVHHTPSQPQR*SRVPPP Trigger: TGGTGGGGGAACTCGTGAGCATCGTTGGGGCTGTGA...AGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGGGGAAGCTAGACTG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | GCTTCCCCACCCCTAGACTGGTGCCTGTATCTGTCCATCACACACCTTCCCACATCCTTTACAGGTGTCTaGTCCAGGATCTGGCGAGCC | + |
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Preference number: 4 (lower is better) Translates to: ASPPLDWCLYLSITHLPTSFTGV*SRIWRA Trigger: GGCTCGCCAGATCCTGGACCAGACACCTGTAAAGGA...TGTGGGAAGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGGGGAAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | CCCAGTGTACATTCCTTGGCATGTTCCTCTTCCTTCTCCCTTGGACTCGCAGGAGTGCAGTTTCCCCCATaGCTCCTCTCTGGTGCACCT | + |
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Preference number: 4 (lower is better) Translates to: PSVHSLACSSSFSLGLAGVQFPP*LLSGAP Trigger: AGGTGCACCAGAGAGGAGCCATGGGGGAAACTGCAC...TCCTGCGAGTCCAAGGGAGAAGGAAGAGGAACATGCCAAGGAATGTACACTGGG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR GCA 90 bp | GGGAGCTTCCATAAGAGAACAAGGAAAGCTTGGATGAGGCACGGACCACAGAGTGGTGGCCACAACCTGTaGTCTCCAGAGCTCATCTCG | + |
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Preference number: 4 (lower is better) Translates to: GSFHKRTRKAWMRHGPQSGGHNL*SPELIS Trigger: CGAGATGAGCTCTGGAGAGCACAGGTTGTGGCCACC...ACTCTGTGGTCCGTGCCTCATCCAAGCTTTCCTTGTTCTCTTATGGAAGCTCCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR GCA 90 bp | CCAGTGTACATTCCTTGGCATGTTCCTCTTCCTTCTCCCTTGGACTCGCAGGATTTGCTGGAAGGCCTGTaGATAGCGGCGGATGCGTTG | + |
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Preference number: 4 (lower is better) Translates to: PVYIPWHVPLPSPLDSQDLLEGL*IAADAL Trigger: CAACGCATCCGCCGCTATGCACAGGCCTTCCAGCAA...ATCCTGCGAGTCCAAGGGAGAAGGAAGAGGAACATGCCAAGGAATGTACACTGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR TCA 90 bp | GGGGATCAGGAAATGATTTTATTGGAAGGTGGCAAGGCTCAGTCTAGCTTCCCCTCTCCACCAGCAGGATaGTCACAGCCCCAACGATGC | + |
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Preference number: 4 (lower is better) Translates to: GDQEMILLEGGKAQSSFPSPPAG*SQPQRC Trigger: GCATCGTTGGGGCTGTGATCATCCTGCTGGTGGAGA...GGGGAAGCTAGACTGAGCCTTGCCACCTTCCAATAAAATCATTTCCTGATCCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR GCA 90 bp | AGACAGGTGCCTGAGATAGGAAGCCTGTCTTTAAAGTGCTCTGGTGTGCAGGGGCAGATCCTCTTCTGCTaGAGCAGGTTCTGCTCGTCT | + |
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Preference number: 4 (lower is better) Translates to: RQVPEIGSLSLKCSGVQGQILFC*SRFCSS Trigger: AGACGAGCAGAACCTGCTGCAGCAGAAGAGGATCTG...CCCCTGCACACCAGAGCACTTTAAAGACAGGCTTCCTATCTCAGGCACCTGTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | GTCTTCCTTTTGCTCCAAGATAAAGGAGTTGTGGAGCCCTGGAGCATTTATTCCGACCACCCCATGGGGTaGAAGGCTGGTTCCTTGGGG | + |
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Preference number: 4 (lower is better) Translates to: VFLLLQDKGVVEPWSIYSDHPMG*KAGSLG Trigger: CCCCAAGGAACCAGCCTTCCACCCCATGGGGTGGTC...GGAATAAATGCTCCAGGGCTCCACAACTCCTTTATCTTGGAGCAAAAGGAAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | CAGTCTAGCTTCCCCACCCCTAGACTGGTGCCTGTATCTGTCCATCACACACCTAAGGGGGTGAGTCCCTaGTTATTTGGCACAAGTTCC | + |
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Preference number: 4 (lower is better) Translates to: QSSFPTPRLVPVSVHHTPKGVSP*LFGTSS Trigger: GGAACTTGTGCCAAATAACCAGGGACTCACCCCCTT...AGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGGGGAAGCTAGACTG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | GAAGAGTTCTGTGCCCTCCCACTTATTAGACCTGGGAGGAGACAGGTGCCTGAGGAGTCCCTGGTTATTTaGCACAAGTTCCAGGGACTT | + |
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Preference number: 4 (lower is better) Translates to: EEFCALPLIRPGRRQVPEESLVI*HKFQGL Trigger: AAGTCCCTGGAACTTGTGCCAAATAACCAGGGACTC...CTCAGGCACCTGTCTCCTCCCAGGTCTAATAAGTGGGAGGGCACAGAACTCTTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | ATGTTCCTCTTCCTTCTCCCTTGGACTCGCAGGATGACCTTAGCTGTCTTTCTTGTCTGGTCCAGGATCTaGCGAGCCTCCCGTTTCTTG | + |
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Preference number: 4 (lower is better) Translates to: MFLFLLPWTRRMTLAVFLVWSRI*RASRFL Trigger: CAAGAAACGGGAGGCTCGCCAGATCCTGGACCAGAC...AAGAAAGACAGCTAAGGTCATCCTGCGAGTCCAAGGGAGAAGGAAGAGGAACAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | GGGAGCTTCCATAAGAGAACAAGGAAAGCTTGGATGAGGCACGGACCACAGAGTGCTCTAACATCACAGTaGTGGCCACAACCTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: GSFHKRTRKAWMRHGPQSALTSQ*WPQPVL Trigger: GAGCACAGGTTGTGGCCACCACTGTGATGTTAGAGC...ACTCTGTGGTCCGTGCCTCATCCAAGCTTTCCTTGTTCTCTTATGGAAGCTCCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR TCA 90 bp | GACTGGTGCCTGTATCTGTCCATCACACACCTTCCCACAATCTCAGTGTTCTCCAGGAGTCAATCTCAGTaGGGTCATACAGTGTGGAGG | + |
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Preference number: 4 (lower is better) Translates to: DWCLYLSITHLPTISVFSRSQSQ*GHTVWR Trigger: CCTCCACACTGTATGACCTCACTGAGATTGACTCCT...GGAGAACACTGAGATTGTGGGAAGGTGTGTGATGGACAGATACAGGCACCAGTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR TCA 90 bp | GGGAGCTTCCATAAGAGAACAAGGAAAGCTTGGATGAGGCACGGACCACAGAGTGGATGCGTTGTCTGTTaGGATCTTGCCTGTCTTCCA | + |
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Preference number: 4 (lower is better) Translates to: GSFHKRTRKAWMRHGPQSGCVVC*DLACLP Trigger: TGGAAGACAGGCAAGATCTCAACAGACAACGCATCC...ACTCTGTGGTCCGTGCCTCATCCAAGCTTTCCTTGTTCTCTTATGGAAGCTCCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | GGGGATCAGGAAATGATTTTATTGGAAGGTGGCAAGGCTCAGTCTAGCTTCCCCGAAGCCTTTCCCAATTaGTGCTGCTTCGGGAGGTAC | + |
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Preference number: 4 (lower is better) Translates to: GDQEMILLEGGKAQSSFPEAFPN*CCFGRY Trigger: GTACCTCCCGAAGCAGCACCAATTGGGAAAGGCTTC...GGGGAAGCTAGACTGAGCCTTGCCACCTTCCAATAAAATCATTTCCTGATCCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| 3UTR CAA 72 bp | TGGAGCCCTGGAGCATTTATTCCCAGTGTACATTCCTaGGCATGTTCCTCTTCCTTCTCCCTTGGACTCGCA | + |
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Preference number: 4 (lower is better) Translates to: WSPGAFIPSVHS*ACSSSFSLGLA Trigger: TGCGAGTCCAAGGGAGAAGGAAGAGGAACATGCCAAGGAATGTACACTGGGAATAAATGCTCCAGGGCTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR GCA 90 bp | CAGTGTACATTCCTTGGCATGTTCCTCTTCCTTCTCCCTTGGACTCGCAGGATGGTCTGTGGAACCATCTaGAGAACTTGTTCCATAGGC | + |
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Preference number: 4 (lower is better) Translates to: QCTFLGMFLFLLPWTRRMVCGTI*RTCSIG Trigger: GCCTATGGAACAAGTTCTGCAGATGGTTCCACAGAC...CATCCTGCGAGTCCAAGGGAGAAGGAAGAGGAACATGCCAAGGAATGTACACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR GCA 90 bp | TCTTCCTTTTGCTCCAAGATAAAGGAGTTGTGGAGCCCTGGAGCATTTATTCCCGGCTGCTATGTGAAGTaGAGTTTCCCCCATGGCTCC | + |
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Preference number: 4 (lower is better) Translates to: SSFCSKIKELWSPGAFIPGCYVK*SFPHGS Trigger: GGAGCCATGGGGGAAACTGCACTTCACATAGCAGCC...GGGAATAAATGCTCCAGGGCTCCACAACTCCTTTATCTTGGAGCAAAAGGAAGA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR GCA 90 bp | CAGTGTACATTCCTTGGCATGTTCCTCTTCCTTCTCCCTTGGACTCGCAGGATGTGTCTGTTGAGATCTTaGCTGTCTTCCACCCTCAAG | + |
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Preference number: 4 (lower is better) Translates to: QCTFLGMFLFLLPWTRRMCLLRS*LSSTLK Trigger: CTTGAGGGTGGAAGACAGGCAAGATCTCAACAGACA...CATCCTGCGAGTCCAAGGGAGAAGGAAGAGGAACATGCCAAGGAATGTACACTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR GCA 90 bp | AAGAGAACAAGGAAAGCTTGGATGAGGCACGGACCACAGAGTCGTCTTCCTTTTGCCTTTCCCAATTGGTaGTGCTTCGGGAGGTACTTC | + |
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Preference number: 4 (lower is better) Translates to: KRTRKAWMRHGPQSRLPFAFPNW*CFGRYF Trigger: GAAGTACCTCCCGAAGCAGCACCAATTGGGAAAGGC...AAAAGGAAGACGACTCTGTGGTCCGTGCCTCATCCAAGCTTTCCTTGTTCTCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | CTCCCACTTATTAGACCTGGGAGGAGACAGGTGCCTGAGATAGGAAGCCTGTCTATAGCTCCGAAGTCATaGGCTCAAAGACTAGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: LPLIRPGRRQVPEIGSLSIAPKS*AQRLVL Trigger: CAGAACTAGTCTTTGAGCCCATGACTTCGGAGCTAT...AGACAGGCTTCCTATCTCAGGCACCTGTCTCCTCCCAGGTCTAATAAGTGGGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR TCA 90 bp | GGGGATCAGGAAATGATTTTATTGGAAGGTGGCAAGGCTCAGTCTAGCTTCCCCAGTTCCAGTAGGGATTaGTCATCTCCTGAGGAGTCA | + |
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Preference number: 4 (lower is better) Translates to: GDQEMILLEGGKAQSSFPSSSRD*SSPEES Trigger: TGACTCCTCAGGAGATGATCAATCCCTACTGGAACT...GGGGAAGCTAGACTGAGCCTTGCCACCTTCCAATAAAATCATTTCCTGATCCCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR TCA 90 bp | AGTTGTGGAGCCCTGGAGCATTTATTCCCAGTGTACATTCCTTGGCATGTTCCTCTCTGGCAAAGTACATaGCATTGCACCAGCCCAACA | + |
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Preference number: 4 (lower is better) Translates to: SCGALEHLFPVYIPWHVPLWQST*HCTSPT Trigger: TGTTGGGCTGGTGCAATGTCATGTACTTTGCCAGAG...AGGAACATGCCAAGGAATGTACACTGGGAATAAATGCTCCAGGGCTCCACAACT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR TCA 90 bp | CAGTCTAGCTTCCCCACCCCTAGACTGGTGCCTGTATCTGTCCATCACACACCTCCAAAAATCATCTTCTaGATCATGATGGTGAAGGGA | + |
|
Preference number: 4 (lower is better) Translates to: QSSFPTPRLVPVSVHHTPPKIIF*IMMVKG Trigger: TCCCTTCACCATCATGATTCAGAAGATGATTTTTGG...AGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGGGGAAGCTAGACTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR TCA 90 bp | AGCTTCCCCACCCCTAGACTGGTGCCTGTATCTGTCCATCACACACCTTCCCACAATGATATAGAAGGCTaGAGCAAATCCCAGAATTAC | + |
|
Preference number: 4 (lower is better) Translates to: SFPTPRLVPVSVHHTPSHNDIEG*SKSQNY Trigger: GTAATTCTGGGATTTGCTTCAGCCTTCTATATCATT...GTGGGAAGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGGGGAAGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR GCA 90 bp | CCACCCCTAGACTGGTGCCTGTATCTGTCCATCACACACCTTCCCACAATCTCAGTTATCATAGAGGGCTaGTATGTGAAGTGCAGTTTC | + |
|
Preference number: 4 (lower is better) Translates to: PPLDWCLYLSITHLPTISVIIEG*YVKCSF Trigger: GAAACTGCACTTCACATAGCAGCCCTCTATGATAAC...TGAGATTGTGGGAAGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR GCA 90 bp | AAGAGAACAAGGAAAGCTTGGATGAGGCACGGACCACAGAGTCGTCTTCCTTTTGGAACATCACAATGTTaGCTTCCACCCCAGCCAACT | + |
|
Preference number: 4 (lower is better) Translates to: KRTRKAWMRHGPQSRLPFGTSQC*LPPQPT Trigger: AGTTGGCTGGGGTGGAAGGCAACATTGTGATGTTCC...AAAAGGAAGACGACTCTGTGGTCCGTGCCTCATCCAAGCTTTCCTTGTTCTCTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR GCA 90 bp | AAGAGAACAAGGAAAGCTTGGATGAGGCACGGACCACAGAGTCGTCTTCCTTTTTTTCCCAATTGGTGCTaGTTCGGGAGGTACTTCGAG | + |
|
Preference number: 4 (lower is better) Translates to: KRTRKAWMRHGPQSRLPFFPNWC*FGRYFE Trigger: CTCGAAGTACCTCCCGAAGCAGCACCAATTGGGAAA...AAAAGGAAGACGACTCTGTGGTCCGTGCCTCATCCAAGCTTTCCTTGTTCTCTT 49% GC, longest homopolymer 7 nt, total homopolymer stretches 7 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | ATGTTCCTCTTCCTTCTCCCTTGGACTCGCAGGATGACCTTAGCTGTCTTTCTTAAGGGACCCAGCATCTaGAATCCTCTGGCAAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: MFLFLLPWTRRMTLAVFLKGPSI*NPLAKY Trigger: GTACTTTGCCAGAGGATTCCAGATGCTGGGTCCCTT...AAGAAAGACAGCTAAGGTCATCCTGCGAGTCCAAGGGAGAAGGAAGAGGAACAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | TCCTTTTGCTCCAAGATAAAGGAGTTGTGGAGCCCTGGAGCATTTATTCCCAGTCTAACATCACAGTGGTaGCCACAACCTGTGCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: SFCSKIKELWSPGAFIPSLTSQW*PQPVLS Trigger: GGAGAGCACAGGTTGTGGCCACCACTGTGATGTTAG...ACTGGGAATAAATGCTCCAGGGCTCCACAACTCCTTTATCTTGGAGCAAAAGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR TCA 90 bp | GTCTTCCTTTTGCTCCAAGATAAAGGAGTTGTGGAGCCCTGGAGCATTTATTCCCACATCCTTCAAACTTaGGCAGCTTGCTCAGAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: VFLLLQDKGVVEPWSIYSHILQT*AACSEP Trigger: AGGCTCTGAGCAAGCTGCTCAAGTTTGAAGGATGTG...GGAATAAATGCTCCAGGGCTCCACAACTCCTTTATCTTGGAGCAAAAGGAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | AGTTGTGGAGCCCTGGAGCATTTATTCCCAGTGTACATTCCTTGGCATGTTCCTCAACCTGAAGATGTCTaGAATCTCCACCAGCAGGAT | + |
|
Preference number: 4 (lower is better) Translates to: SCGALEHLFPVYIPWHVPQPEDV*NLHQQD Trigger: ATCCTGCTGGTGGAGATTCCAGACATCTTCAGGTTG...AGGAACATGCCAAGGAATGTACACTGGGAATAAATGCTCCAGGGCTCCACAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR TCA 90 bp | TCTTCCTTTTGCTCCAAGATAAAGGAGTTGTGGAGCCCTGGAGCATTTATTCCCGCTCTCCATAGTAAATaGGGTTGTGAGGCCTGTAGT | + |
|
Preference number: 4 (lower is better) Translates to: SSFCSKIKELWSPGAFIPALHSK*GCEACS Trigger: ACTACAGGCCTCACAACCTCATTTACTATGGAGAGC...GGGAATAAATGCTCCAGGGCTCCACAACTCCTTTATCTTGGAGCAAAAGGAAGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | GTCTTCCTTTTGCTCCAAGATAAAGGAGTTGTGGAGCCCTGGAGCATTTATTCCCAGGACTCTTGTCTGTaGAACCATCTGCAGAACTTG | + |
|
Preference number: 4 (lower is better) Translates to: VFLLLQDKGVVEPWSIYSQDSCL*NHLQNL Trigger: CAAGTTCTGCAGATGGTTCCACAGACAAGAGTCCTG...GGAATAAATGCTCCAGGGCTCCACAACTCCTTTATCTTGGAGCAAAAGGAAGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR TCA 90 bp | TCTTCCTTTTGCTCCAAGATAAAGGAGTTGTGGAGCCCTGGAGCATTTATTCCCATGTGTAGTGCAGTCTaGCCTTCATATAGCTCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: SSFCSKIKELWSPGAFIPMCSAV*PSYSSE Trigger: TTCGGAGCTATATGAAGGTCAGACTGCACTACACAT...GGGAATAAATGCTCCAGGGCTCCACAACTCCTTTATCTTGGAGCAAAAGGAAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CCA 90 bp | ATGTTCCTCTTCCTTCTCCCTTGGACTCGCAGGATGACCTTAGCTGTCTTTCTTTTCTGCATCAGGTGTTaGAACATCACAATGTTGCCT | + |
|
Preference number: 4 (lower is better) Translates to: MFLFLLPWTRRMTLAVFLFCIRC*NITMLP Trigger: AGGCAACATTGTGATGTTCCAACACCTGATGCAGAA...AAGAAAGACAGCTAAGGTCATCCTGCGAGTCCAAGGGAGAAGGAAGAGGAACAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS TCA 90 bp | TGGCACCCAGCACGCAGAAGTAGGGCCGCCCATACCTCTTCCACTTaGGGCTCACCAGTTCCTTTACAGGTGTCTGGTCCAGGATCTGGC | + |
|
Preference number: 5 (lower is better) Translates to: WHPARRSRAAHTSST*GSPVPLQVSGPGSG Trigger: GCCAGATCCTGGACCAGACACCTGTAAAGGAACTGGTGAGCCTCAAGTGGAAGAGGTATGGGCGGCCCTACTTCTGCGTGCTGGGTGCCA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS TCA 90 bp | CTTGTTGCTGGAAGGCCTGTGCATAGCGGCGGATGCGTTGTCTGTTaGGATCTTGCCTGTCTTCCACCCTCAAGAACCAGCGGTCGCCAA | + |
|
Preference number: 5 (lower is better) Translates to: LVAGRPVHSGGCVVC*DLACLPPSRTSGRQ Trigger: TTGGCGACCGCTGGTTCTTGAGGGTGGAAGACAGGCAAGATCTCAACAGACAACGCATCCGCCGCTATGCACAGGCCTTCCAGCAACAAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CAA 90 bp | CCACCCCTAGACTGGTGCCTGTATCTGTCCATCACACACCTTCCCACAATCTCAGTGTTGTCCCGGGGGTaGGTGCGGTTAGTGATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: PPLDWCLYLSITHLPTISVLSRG*VRLVIL Trigger: CAGGATCACTAACCGCACCAACCCCCGGGACAACAC...TGAGATTGTGGGAAGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS TCA 90 bp | TCCCAGATCCTCTTCTGCTGCAGCAGGTTCTGCTCGTCTCGGCTCTaGGCCCAGGACTCTTGTCTGTGGAACCATCTGCAGAACTTGTTC | + |
|
Preference number: 5 (lower is better) Translates to: SQILFCCSRFCSSRL*AQDSCLWNHLQNLF Trigger: GAACAAGTTCTGCAGATGGTTCCACAGACAAGAGTCCTGGGCTCAGAGCCGAGACGAGCAGAACCTGCTGCAGCAGAAGAGGATCTGGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CAA 90 bp | AGACAGGTGCCTGAGATAGGAAGCCTGTCTTTAAAGTGCTCTGGTGTGCAGGGGATTAACCCCTTCTCCTaGGGCAGGGACCACCCCATG | + |
|
Preference number: 5 (lower is better) Translates to: RQVPEIGSLSLKCSGVQGINPFS*GRDHPM Trigger: CATGGGGTGGTCCCTGCCCAAGGAGAAGGGGTTAAT...CCCCTGCACACCAGAGCACTTTAAAGACAGGCTTCCTATCTCAGGCACCTGTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CAA 90 bp | GCTTCCCCACCCCTAGACTGGTGCCTGTATCTGTCCATCACACACCTTCCCACATGGAACATCACAATGTaGCCTTCCACCCCAGCCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ASPPLDWCLYLSITHLPTWNITM*PSTPAN Trigger: GTTGGCTGGGGTGGAAGGCAACATTGTGATGTTCCA...TGTGGGAAGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGGGGAAGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CAA 90 bp | CCCAGTGTACATTCCTTGGCATGTTCCTCTTCCTTCTCCCTTGGACTCGCAGGACTGAGCCCAGGACTCTaGTCTGTGGAACCATCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: PSVHSLACSSSFSLGLAGLSPGL*SVEPSA Trigger: TGCAGATGGTTCCACAGACAAGAGTCCTGGGCTCAG...TCCTGCGAGTCCAAGGGAGAAGGAAGAGGAACATGCCAAGGAATGTACACTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CAA 90 bp | CAGTCTAGCTTCCCCACCCCTAGACTGGTGCCTGTATCTGTCCATCACACACCTCGGATGCGTTGTCTGTaGAGATCTTGCCTGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: QSSFPTPRLVPVSVHHTPRMRCL*RSCLSS Trigger: GGAAGACAGGCAAGATCTCAACAGACAACGCATCCG...AGGTGTGTGATGGACAGATACAGGCACCAGTCTAGGGGTGGGGAAGCTAGACTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS GCA 90 bp | GCTCGTCTCGGCTCTGAGCCCAGGACTCTTGTCTGTGGAACCATCTaGAGAACTTGTTCCATAGGCAGAGTATTAACCCCTTCTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ARLGSEPRTLVCGTI*RTCSIGRVLTPSPW Trigger: CCAAGGAGAAGGGGTTAATACTCTGCCTATGGAACAAGTTCTGCAGATGGTTCCACAGACAAGAGTCCTGGGCTCAGAGCCGAGACGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS GCA 90 bp | GTGGAGGTCAATGGCCCATATGTCCACTGGATGTGTTTCCGCTTCTaGATCAGGTGTTGGAACATCACAATGTTGCCTTCCACCCCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VEVNGPYVHWMCFRF*IRCWNITMLPSTPA Trigger: GGCTGGGGTGGAAGGCAACATTGTGATGTTCCAACACCTGATGCAGAAGCGGAAACACATCCAGTGGACATATGGGCCATTGACCTCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS GCA 90 bp | TTCCAAGTCCTCAGAGTAGAGGCCATCTTGTTGCTGGAAGGCCTGTaGATAGCGGCGGATGCGTTGTCTGTTGAGATCTTGCCTGTCTTC | + |
|
Preference number: 5 (lower is better) Translates to: FQVLRVEAILLLEGL*IAADALSVEILPVF Trigger: GAAGACAGGCAAGATCTCAACAGACAACGCATCCGCCGCTATGCACAGGCCTTCCAGCAACAAGATGGCCTCTACTCTGAGGACTTGGAA 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CAA 90 bp | GAAGAGTTCTGTGCCCTCCCACTTATTAGACCTGGGAGGAGACAGGTGCCTGAGCCTCCATTAGCACCATaGCAGCCTCCAGGTTATCAT | + |
|
Preference number: 5 (lower is better) Translates to: EEFCALPLIRPGRRQVPEPPLAP*QPPGYH Trigger: ATGATAACCTGGAGGCTGCAATGGTGCTAATGGAGG...CTCAGGCACCTGTCTCCTCCCAGGTCTAATAAGTGGGAGGGCACAGAACTCTTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CAA 90 bp | GTCTTCCTTTTGCTCCAAGATAAAGGAGTTGTGGAGCCCTGGAGCATTTATTCCTCCACCCCAGCCAACTaGAAGGGGGTGAGTCCCTGG | + |
|
Preference number: 5 (lower is better) Translates to: VFLLLQDKGVVEPWSIYSSTPAN*KGVSPW Trigger: CCAGGGACTCACCCCCTTCAAGTTGGCTGGGGTGGA...GGAATAAATGCTCCAGGGCTCCACAACTCCTTTATCTTGGAGCAAAAGGAAGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CAA 90 bp | GGGAGCTTCCATAAGAGAACAAGGAAAGCTTGGATGAGGCACGGACCACAGAGTAGAGTAGAGGCCATCTaGTTGCTGGAAGGCCTGTGC | + |
|
Preference number: 5 (lower is better) Translates to: GSFHKRTRKAWMRHGPQSRVEAI*LLEGLC Trigger: GCACAGGCCTTCCAGCAACAAGATGGCCTCTACTCT...ACTCTGTGGTCCGTGCCTCATCCAAGCTTTCCTTGTTCTCTTATGGAAGCTCCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CAA 90 bp | GGCAAGGCTCAGTCTAGCTTCCCCACCCCTAGACTGGTGCCTGTATCTGTCCATTGGACATCGTTTTCTTaGGCAGCTAGAAGAAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: GKAQSSFPTPRLVPVSVHWTSFS*AARRRG Trigger: ACCTCTTCTTCTAGCTGCCAAAGAAAACGATGTCCA...ATGGACAGATACAGGCACCAGTCTAGGGGTGGGGAAGCTAGACTGAGCCTTGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CAA 90 bp | GACTGGTGCCTGTATCTGTCCATCACACACCTTCCCACAATCTCAGTGTTCTCCTCAAACTTGAGCAGCTaGCTCAGAGCCTGGACATCG | + |
|
Preference number: 5 (lower is better) Translates to: DWCLYLSITHLPTISVFSSNLSS*LRAWTS Trigger: CGATGTCCAGGCTCTGAGCAAGCTGCTCAAGTTTGA...GGAGAACACTGAGATTGTGGGAAGGTGTGTGATGGACAGATACAGGCACCAGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CCA 90 bp | CCATACCTCTTCCACTTGAGGCTCACCAGTTCCTTTACAGGTGTCTaGTCCAGGATCTGGCGAGCCTCCCGTTTCTTGGTAGTAACAATA | + |
|
Preference number: 5 (lower is better) Translates to: PYLFHLRLTSSFTGV*SRIWRASRFLVVTI Trigger: TATTGTTACTACCAAGAAACGGGAGGCTCGCCAGATCCTGGACCAGACACCTGTAAAGGAACTGGTGAGCCTCAAGTGGAAGAGGTATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CAA 90 bp | AAGAGAACAAGGAAAGCTTGGATGAGGCACGGACCACAGAGTCGTCTTCCTTTTCTTCCTCAGGGCCCCTaGTCGAAGCCTTTCCCAATT | + |
|
Preference number: 5 (lower is better) Translates to: KRTRKAWMRHGPQSRLPFLPQGP*SKPFPI Trigger: AATTGGGAAAGGCTTCGACAAGGGGCCCTGAGGAAG...AAAAGGAAGACGACTCTGTGGTCCGTGCCTCATCCAAGCTTTCCTTGTTCTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CCA 90 bp | TGGTGCACCTCACATCCTTCAAACTTGAGCAGCTTGCTCAGAGCCTaGACATCGTTTTCTTTGGCAGCTAGAAGAAGAGGTGATTCCCAG | + |
|
Preference number: 5 (lower is better) Translates to: WCTSHPSNLSSLLRA*TSFSLAARRRGDSQ Trigger: CTGGGAATCACCTCTTCTTCTAGCTGCCAAAGAAAACGATGTCCAGGCTCTGAGCAAGCTGCTCAAGTTTGAAGGATGTGAGGTGCACCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CAA 90 bp | ATAAAGGAGTTGTGGAGCCCTGGAGCATTTATTCCCAGTGTACATTCCTTGGCACGAAGCCTTTCCCAATaGGTGCTGCTTCGGGAGGTA | + |
|
Preference number: 5 (lower is better) Translates to: IKELWSPGAFIPSVHSLARSLSQ*VLLREV Trigger: TACCTCCCGAAGCAGCACCAATTGGGAAAGGCTTCG...TGCCAAGGAATGTACACTGGGAATAAATGCTCCAGGGCTCCACAACTCCTTTAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS TCA 90 bp | GGACAGATAGGCACCAAAGGGACGTGCTGTCTCCAGTTTTTCTCCTaGATCTTTTTCCAAGTCCTCAGAGTAGAGGCCATCTTGTTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: GQIGTKGTCCLQFFS*IFFQVLRVEAILLL Trigger: CAGCAACAAGATGGCCTCTACTCTGAGGACTTGGAAAAAGATTCAGGAGAAAAACTGGAGACAGCACGTCCCTTTGGTGCCTATCTGTCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CAA 90 bp | GTCTTCCTTTTGCTCCAAGATAAAGGAGTTGTGGAGCCCTGGAGCATTTATTCCTCACATCCTTCAAACTaGAGCAGCTTGCTCAGAGCC | + |
|
Preference number: 5 (lower is better) Translates to: VFLLLQDKGVVEPWSIYSSHPSN*SSLLRA Trigger: GGCTCTGAGCAAGCTGCTCAAGTTTGAAGGATGTGA...GGAATAAATGCTCCAGGGCTCCACAACTCCTTTATCTTGGAGCAAAAGGAAGAC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CAA 90 bp | AGTTGTGGAGCCCTGGAGCATTTATTCCCAGTGTACATTCCTTGGCATGTTCCTCTTCTGCATCAGGTGTaGGAACATCACAATGTTGCC | + |
|
Preference number: 5 (lower is better) Translates to: SCGALEHLFPVYIPWHVPLLHQV*EHHNVA Trigger: GGCAACATTGTGATGTTCCAACACCTGATGCAGAAG...AGGAACATGCCAAGGAATGTACACTGGGAATAAATGCTCCAGGGCTCCACAACT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS-3UTR CAA 90 bp | TCTTCCTTTTGCTCCAAGATAAAGGAGTTGTGGAGCCCTGGAGCATTTATTCCCCCATACCTCTTCCACTaGAGGCTCACCAGTTCCTTT | + |
|
Preference number: 5 (lower is better) Translates to: SSFCSKIKELWSPGAFIPPYLFH*RLTSSF Trigger: AAAGGAACTGGTGAGCCTCAAGTGGAAGAGGTATGG...GGGAATAAATGCTCCAGGGCTCCACAACTCCTTTATCTTGGAGCAAAAGGAAGA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS TCA 90 bp | CGAGCCTCCCGTTTCTTGGTAGTAACAATAAGTTCCAGTAGGGATTaGTCATCTCCTGAGGAGTCAATCTCAGTGAGGTCATACAGTGTG | + |
|
Preference number: 5 (lower is better) Translates to: RASRFLVVTISSSRD*SSPEESISVRSYSV Trigger: CACACTGTATGACCTCACTGAGATTGACTCCTCAGGAGATGATCAATCCCTACTGGAACTTATTGTTACTACCAAGAAACGGGAGGCTCG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CCA 72 bp | CTGAGGCTGATGCCAGACCCCAACTGGGCTCGACCCTaGGGCCACATTGGCACCCCCAAGAGCCGGCCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: LRLMPDPNWARP*GHIGTPKSRPV Trigger: GACAGGCCGGCTCTTGGGGGTGCCAATGTGGCCCCAGGGTCGAGCCCAGTTGGGGTCTGGCATCAGCCTCAG 68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS TCA 72 bp | CTCTTCTGCTGCAGCAGGTTCTGCTCGTCTCGGCTCTaGGCCCAGGACTCTTGTCTGTGGAACCATCTGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LFCCSRFCSSRL*AQDSCLWNHLQ Trigger: CTGCAGATGGTTCCACAGACAAGAGTCCTGGGCTCAGAGCCGAGACGAGCAGAACCTGCTGCAGCAGAAGAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
||
| CDS CCA 72 bp | CCCAGCCAACTTGAAGGGGGTGAGTCCCTGGTTATTTaGCACAAGTTCCAGGGACTTCAGGTGGTCTCCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PSQLEGGESLVI*HKFQGLQVVSP Trigger: GGGGGAGACCACCTGAAGTCCCTGGAACTTGTGCCAAATAACCAGGGACTCACCCCCTTCAAGTTGGCTGGG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CAA 72 bp | GTTGATTATCCCCCGCAGGTCCTTCCTCAGGGCCCCTaGTCGAAGCCTTTCCCAATTGGTGCTGCTTCGGGA | + |
|
Preference number: 6 (lower is better) Translates to: VDYPPQVLPQGP*SKPFPIGAASG Trigger: TCCCGAAGCAGCACCAATTGGGAAAGGCTTCGACAAGGGGCCCTGAGGAAGGACCTGCGGGGGATAATCAAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
||
| CDS CAA 90 bp | CTGGAAGGCCTGTGCATAGCGGCGGATGCGTTGTCTGTTGAGATCTaGCCTGTCTTCCACCCTCAAGAACCAGCGGTCGCCAAGACCATA | + |
|
Preference number: 6 (lower is better) Translates to: LEGLCIAADALSVEI*PVFHPQEPAVAKTI Trigger: TATGGTCTTGGCGACCGCTGGTTCTTGAGGGTGGAAGACAGGCAAGATCTCAACAGACAACGCATCCGCCGCTATGCACAGGCCTTCCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
||
| CDS TCA 72 bp | GGAAGGCCTGTGCATAGCGGCGGATGCGTTGTCTGTTaGGATCTTGCCTGTCTTCCACCCTCAAGAACCAGC | + |
|
Preference number: 6 (lower is better) Translates to: GRPVHSGGCVVC*DLACLPPSRTS Trigger: GCTGGTTCTTGAGGGTGGAAGACAGGCAAGATCTCAACAGACAACGCATCCGCCGCTATGCACAGGCCTTCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
||
| CDS GCA 72 bp | TCCTCAGGGCCCCTTGTCGAAGCCTTTCCCAATTGGTaGTGCTTCGGGAGGTACTTCGAGATACTGAGGGTG | + |
|
Preference number: 6 (lower is better) Translates to: SSGPLVEAFPNW*CFGRYFEILRV Trigger: CACCCTCAGTATCTCGAAGTACCTCCCGAAGCAGCACCAATTGGGAAAGGCTTCGACAAGGGGCCCTGAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CCA 72 bp | CCTTCCACCCCAGCCAACTTGAAGGGGGTGAGTCCCTaGTTATTTGGCACAAGTTCCAGGGACTTCAGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: PSTPANLKGVSP*LFGTSSRDFRW Trigger: CCACCTGAAGTCCCTGGAACTTGTGCCAAATAACCAGGGACTCACCCCCTTCAAGTTGGCTGGGGTGGAAGG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CCA 72 bp | CCTTCCTCAGGGCCCCTTGTCGAAGCCTTTCCCAATTaGTGCTGCTTCGGGAGGTACTTCGAGATACTGAGG | + |
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Preference number: 6 (lower is better) Translates to: PSSGPLVEAFPN*CCFGRYFEILR Trigger: CCTCAGTATCTCGAAGTACCTCCCGAAGCAGCACCAATTGGGAAAGGCTTCGACAAGGGGCCCTGAGGAAGG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CAA 72 bp | CTTAGGGGTCACATAGGCCTCCTGAAGGAGCTTCTGTaGCATCAGAGTGTTGTCCCGGGGGTTGGTGCGGTT | + |
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Preference number: 6 (lower is better) Translates to: LRGHIGLLKELL*HQSVVPGVGAV Trigger: AACCGCACCAACCCCCGGGACAACACTCTGATGCAACAGAAGCTCCTTCAGGAGGCCTATGTGACCCCTAAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CAA 90 bp | GAGGTCATCCTTAGGGGTCACATAGGCCTCCTGAAGGAGCTTCTGTaGCATCAGAGTGTTGTCCCGGGGGTTGGTGCGGTTAGTGATCCT | + |
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Preference number: 6 (lower is better) Translates to: EVILRGHIGLLKELL*HQSVVPGVGAVSDP Trigger: AGGATCACTAACCGCACCAACCCCCGGGACAACACTCTGATGCAACAGAAGCTCCTTCAGGAGGCCTATGTGACCCCTAAGGATGACCTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CAA 72 bp | TCCTTCCTCAGGGCCCCTTGTCGAAGCCTTTCCCAATaGGTGCTGCTTCGGGAGGTACTTCGAGATACTGAG | + |
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Preference number: 6 (lower is better) Translates to: SFLRAPCRSLSQ*VLLREVLRDTE Trigger: CTCAGTATCTCGAAGTACCTCCCGAAGCAGCACCAATTGGGAAAGGCTTCGACAAGGGGCCCTGAGGAAGGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS GCA 72 bp | CTCAGAGTAGAGGCCATCTTGTTGCTGGAAGGCCTGTaGATAGCGGCGGATGCGTTGTCTGTTGAGATCTTG | + |
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Preference number: 6 (lower is better) Translates to: LRVEAILLLEGL*IAADALSVEIL Trigger: CAAGATCTCAACAGACAACGCATCCGCCGCTATGCACAGGCCTTCCAGCAACAAGATGGCCTCTACTCTGAG 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CCA 72 bp | TTCCACTTGAGGCTCACCAGTTCCTTTACAGGTGTCTaGTCCAGGATCTGGCGAGCCTCCCGTTTCTTGGTA | + |
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Preference number: 6 (lower is better) Translates to: FHLRLTSSFTGV*SRIWRASRFLV Trigger: TACCAAGAAACGGGAGGCTCGCCAGATCCTGGACCAGACACCTGTAAAGGAACTGGTGAGCCTCAAGTGGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CAA 72 bp | ATCTTTTTCCAAGTCCTCAGAGTAGAGGCCATCTTGTaGCTGGAAGGCCTGTGCATAGCGGCGGATGCGTTG | + |
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Preference number: 6 (lower is better) Translates to: IFFQVLRVEAIL*LEGLCIAADAL Trigger: CAACGCATCCGCCGCTATGCACAGGCCTTCCAGCAACAAGATGGCCTCTACTCTGAGGACTTGGAAAAAGAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CAA 90 bp | ATCAGGTGTTGGAACATCACAATGTTGCCTTCCACCCCAGCCAACTaGAAGGGGGTGAGTCCCTGGTTATTTGGCACAAGTTCCAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: IRCWNITMLPSTPAN*KGVSPWLFGTSSRD Trigger: GTCCCTGGAACTTGTGCCAAATAACCAGGGACTCACCCCCTTCAAGTTGGCTGGGGTGGAAGGCAACATTGTGATGTTCCAACACCTGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CAA 72 bp | CTCTGGTGCACCTCACATCCTTCAAACTTGAGCAGCTaGCTCAGAGCCTGGACATCGTTTTCTTTGGCAGCT | + |
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Preference number: 6 (lower is better) Translates to: LWCTSHPSNLSS*LRAWTSFSLAA Trigger: AGCTGCCAAAGAAAACGATGTCCAGGCTCTGAGCAAGCTGCTCAAGTTTGAAGGATGTGAGGTGCACCAGAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CAA 72 bp | TGGAACATCACAATGTTGCCTTCCACCCCAGCCAACTaGAAGGGGGTGAGTCCCTGGTTATTTGGCACAAGT | + |
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Preference number: 6 (lower is better) Translates to: WNITMLPSTPAN*KGVSPWLFGTS Trigger: ACTTGTGCCAAATAACCAGGGACTCACCCCCTTCAAGTTGGCTGGGGTGGAAGGCAACATTGTGATGTTCCA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CAA 90 bp | ATGGCTCCTCTCTGGTGCACCTCACATCCTTCAAACTTGAGCAGCTaGCTCAGAGCCTGGACATCGTTTTCTTTGGCAGCTAGAAGAAGA | + |
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Preference number: 6 (lower is better) Translates to: MAPLWCTSHPSNLSS*LRAWTSFSLAARRR Trigger: TCTTCTTCTAGCTGCCAAAGAAAACGATGTCCAGGCTCTGAGCAAGCTGCTCAAGTTTGAAGGATGTGAGGTGCACCAGAGAGGAGCCAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CCA 72 bp | CTCACCAGTTCCTTTACAGGTGTCTGGTCCAGGATCTaGCGAGCCTCCCGTTTCTTGGTAGTAACAATAAGT | + |
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Preference number: 6 (lower is better) Translates to: LTSSFTGVWSRI*RASRFLVVTIS Trigger: ACTTATTGTTACTACCAAGAAACGGGAGGCTCGCCAGATCCTGGACCAGACACCTGTAAAGGAACTGGTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS CAA 72 bp | GCCCAGGACTCTTGTCTGTGGAACCATCTGCAGAACTaGTTCCATAGGCAGAGTATTAACCCCTTCTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: AQDSCLWNHLQN*FHRQSINPFSL Trigger: CAAGGAGAAGGGGTTAATACTCTGCCTATGGAACAAGTTCTGCAGATGGTTCCACAGACAAGAGTCCTGGGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS TCA 72 bp | GTAGGGATTGATCATCTCCTGAGGAGTCAATCTCAGTaGGGTCATACAGTGTGGAGGTCAATGGCCCATATG | + |
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Preference number: 6 (lower is better) Translates to: VGIDHLLRSQSQ*GHTVWRSMAHM Trigger: CATATGGGCCATTGACCTCCACACTGTATGACCTCACTGAGATTGACTCCTCAGGAGATGATCAATCCCTAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS GCA 72 bp | AATGGCCCATATGTCCACTGGATGTGTTTCCGCTTCTaGATCAGGTGTTGGAACATCACAATGTTGCCTTCC | + |
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Preference number: 6 (lower is better) Translates to: NGPYVHWMCFRF*IRCWNITMLPS Trigger: GGAAGGCAACATTGTGATGTTCCAACACCTGATGCAGAAGCGGAAACACATCCAGTGGACATATGGGCCATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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| CDS TCA 72 bp | CGTTTCTTGGTAGTAACAATAAGTTCCAGTAGGGATTaGTCATCTCCTGAGGAGTCAATCTCAGTGAGGTCA | + |
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Preference number: 6 (lower is better) Translates to: RFLVVTISSSRD*SSPEESISVRS Trigger: TGACCTCACTGAGATTGACTCCTCAGGAGATGATCAATCCCTACTGGAACTTATTGTTACTACCAAGAAACG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031902.7 |
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