Pregenerated sensors for TRPV5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000036899Ensembl transcript IDs: ENSMUST00000031901.11, ENSMUST00000193503.2
Found 68 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATAACCATAGAATTCAAACTCTTGCAAAGCAGCTCTCTTCTCCCTaGCCACCTTCAACTACCCCCAACCCCCTTTCTCACACCTTGGCC | + |
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Preference number: 1 (lower is better) Translates to: HNHRIQTLAKQLSSP*PPSTTPNPLSHTLA Trigger: GGCCAAGGTGTGAGAAAGGGGGTTGGGGGTAGTTGAAGGTGGGCAGGGAGAAGAGAGCTGCTTTGCAAGAGTTTGAATTCTATGGTTATG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| 3UTR CCA 90 bp | TGGGATTTGCTAGCTGGGAAGAGAGTCCCTAGAAGGGTAAGGAGATaGAAAGGATGTTCATGGTATGATGGTTCTTTCCACATTATGCAT | + |
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Preference number: 1 (lower is better) Translates to: WDLLAGKRVPRRVRR*KGCSWYDGSFHIMH Trigger: ATGCATAATGTGGAAAGAACCATCATACCATGAACATCCTTTCCATCTCCTTACCCTTCTAGGGACTCTCTTCCCAGCTAGCAAATCCCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| 3UTR GCA 90 bp | GGAGATGGAAAGGATGTTCATGGTATGATGGTTCTTTCCACATTATaGATTATAAAATTAGGCAAGTCTCCTGGCTTGCTGCCTTCTGCC | + |
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Preference number: 1 (lower is better) Translates to: GDGKDVHGMMVLSTL*IIKLGKSPGLLPSA Trigger: GGCAGAAGGCAGCAAGCCAGGAGACTTGCCTAATTTTATAATGCATAATGTGGAAAGAACCATCATACCATGAACATCCTTTCCATCTCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| 3UTR CCA 90 bp | GGGAAGAGAGTCCCTAGAAGGGTAAGGAGATGGAAAGGATGTTCATaGTATGATGGTTCTTTCCACATTATGCATTATAAAATTAGGCAA | + |
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Preference number: 1 (lower is better) Translates to: GKRVPRRVRRWKGCS*YDGSFHIMHYKIRQ Trigger: TTGCCTAATTTTATAATGCATAATGTGGAAAGAACCATCATACCATGAACATCCTTTCCATCTCCTTACCCTTCTAGGGACTCTCTTCCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| 3UTR-3UTR GCA 90 bp | CATACAACACTTGATGACCATTGCCCATCTCTACAAATGCTCAAATGTGAAATACAGCTCTCTTCTCCCTaGCCACCTTCAACTACCCCC | + |
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Preference number: 2 (lower is better) Translates to: HTTLDDHCPSLQMLKCEIQLSSP*PPSTTP Trigger: GGGGGTAGTTGAAGGTGGGCAGGGAGAAGAGAGCTG...TATTTCACATTTGAGCATTTGTAGAGATGGGCAATGGTCATCAAGTGTTGTATG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| 3UTR-3UTR GCA 90 bp | GTACAATCCTCCTTAGATAAAGCAACTACAATCAATTCCCGGAGAGGAAGTAAAGCAAGTCTCCTGGCTTaGTGCCTTCTGCCTTCTGTT | + |
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Preference number: 2 (lower is better) Translates to: VQSSLDKATTINSRRGSKASLLA*CLLPSV Trigger: AACAGAAGGCAGAAGGCAGCAAGCCAGGAGACTTGC...TTTACTTCCTCTCCGGGAATTGATTGTAGTTGCTTTATCTAAGGAGGATTGTAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| 3UTR CAA 90 bp | GTTCTTTCCACATTATGCATTATAAAATTAGGCAAGTCTCCTGGCTaGCTGCCTTCTGCCTTCTGTTCAAGGCATAAGAAAGATGGTCCA | + |
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Preference number: 2 (lower is better) Translates to: VLSTLCIIKLGKSPG*LPSAFCSRHKKDGP Trigger: TGGACCATCTTTCTTATGCCTTGAACAGAAGGCAGAAGGCAGCAAGCCAGGAGACTTGCCTAATTTTATAATGCATAATGTGGAAAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| 3UTR-3UTR CCA 90 bp | CTTGTACAATCCTCCTTAGATAAAGCAACTACAATCAATTCCCGGAGAGGAAGTTGGAAAGGATGTTCATaGTATGATGGTTCTTTCCAC | + |
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Preference number: 2 (lower is better) Translates to: LVQSSLDKATTINSRRGSWKGCS*YDGSFH Trigger: GTGGAAAGAACCATCATACCATGAACATCCTTTCCA...ACTTCCTCTCCGGGAATTGATTGTAGTTGCTTTATCTAAGGAGGATTGTACAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| 3UTR-3UTR GCA 90 bp | GGCTCTCAGGATATGAGCTTTAGAGGAACTGAAAAGGTACATACAACACTTGATGCCCATCTCTACAAATaGTCAAATGTGAAATATTGC | + |
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Preference number: 2 (lower is better) Translates to: GSQDMSFRGTEKVHTTLDAHLYK*SNVKYC Trigger: GCAATATTTCACATTTGAGCATTTGTAGAGATGGGC...ATCAAGTGTTGTATGTACCTTTTCAGTTCCTCTAAAGCTCATATCCTGAGAGCC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| 3UTR CCA 72 bp | CTAGCTGGGAAGAGAGTCCCTAGAAGGGTAAGGAGATaGAAAGGATGTTCATGGTATGATGGTTCTTTCCAC | + |
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Preference number: 3 (lower is better) Translates to: LAGKRVPRRVRR*KGCSWYDGSFH Trigger: GTGGAAAGAACCATCATACCATGAACATCCTTTCCATCTCCTTACCCTTCTAGGGACTCTCTTCCCAGCTAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| 3UTR-3UTR CAA 90 bp | AAAGCAACTACAATCAATTCCCGGAGAGGAAGTAAAATAATGGTTAGTGAGGACCCCCTTTCTCACACCTaGGCCTACTTGGGGCTAAGT | + |
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Preference number: 3 (lower is better) Translates to: KATTINSRRGSKIMVSEDPLSHT*AYLGLS Trigger: ACTTAGCCCCAAGTAGGCCAAGGTGTGAGAAAGGGG...GTCCTCACTAACCATTATTTTACTTCCTCTCCGGGAATTGATTGTAGTTGCTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| 3UTR GCA 72 bp | AAGGATGTTCATGGTATGATGGTTCTTTCCACATTATaGATTATAAAATTAGGCAAGTCTCCTGGCTTGCTG | + |
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Preference number: 3 (lower is better) Translates to: KDVHGMMVLSTL*IIKLGKSPGLL Trigger: CAGCAAGCCAGGAGACTTGCCTAATTTTATAATGCATAATGTGGAAAGAACCATCATACCATGAACATCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| 3UTR CCA 72 bp | GTCCCTAGAAGGGTAAGGAGATGGAAAGGATGTTCATaGTATGATGGTTCTTTCCACATTATGCATTATAAA | + |
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Preference number: 3 (lower is better) Translates to: VPRRVRRWKGCS*YDGSFHIMHYK Trigger: TTTATAATGCATAATGTGGAAAGAACCATCATACCATGAACATCCTTTCCATCTCCTTACCCTTCTAGGGAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CCA 90 bp | GATTTGCTAGCTGGGAAGAGAGTCCCTAGAAGGGTAAGGAGATGGAAAGGATGTTCTCCAGCATCACTGTaGTGGCTACAACTTGTGCTC | + |
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Preference number: 4 (lower is better) Translates to: DLLAGKRVPRRVRRWKGCSPASL*WLQLVL Trigger: GAGCACAAGTTGTAGCCACCACAGTGATGCTGGAGA...ACATCCTTTCCATCTCCTTACCCTTCTAGGGACTCTCTTCCCAGCTAGCAAATC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR GCA 90 bp | CTTTCCACATTATGCATTATAAAATTAGGCAAGTCTCCTGGCTTGCTGCCTTCTGGCAGCTACATGCAGTaGTGTCTCTCCCAGAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSTLCIIKLGKSPGLLPSGSYMQ*CLSQSS Trigger: GGAGCTCTGGGAGAGACAGCACTGCATGTAGCTGCC...AGAAGGCAGCAAGCCAGGAGACTTGCCTAATTTTATAATGCATAATGTGGAAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR GCA 90 bp | GATTTGCTAGCTGGGAAGAGAGTCCCTAGAAGGGTAAGGAGATGGAAAGGATGTAAAGGTGCTGAACATTaGTGTGGGGTAGTCGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: DLLAGKRVPRRVRRWKGCKGAEH*CGVVGE Trigger: TTCTCCGACTACCCCACAGCAATGTTCAGCACCTTT...ACATCCTTTCCATCTCCTTACCCTTCTAGGGACTCTCTTCCCAGCTAGCAAATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CCA 90 bp | CTTTCCACATTATGCATTATAAAATTAGGCAAGTCTCCTGGCTTGCTGCCTTCTAAGGGGGTGAGTCCCTaGTTGTTGGGCACAAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSTLCIIKLGKSPGLLPSKGVSP*LLGTSS Trigger: GGAGCTTGTGCCCAACAACCAGGGACTCACCCCCTT...AGAAGGCAGCAAGCCAGGAGACTTGCCTAATTTTATAATGCATAATGTGGAAAG 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CCA 90 bp | GTGTATATCATCCAGCTATTCATAACCATAGAATTCAAACTCTTGCAAAGCAGCCCAGCACCAGGGCCATaGACATGGGCACTACCTCGC | + |
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Preference number: 4 (lower is better) Translates to: VYIIQLFITIEFKLLQSSPAPGP*TWALPR Trigger: GCGAGGTAGTGCCCATGTCCATGGCCCTGGTGCTGG...GCTGCTTTGCAAGAGTTTGAATTCTATGGTTATGAATAGCTGGATGATATACAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR TCA 90 bp | GATTTGCTAGCTGGGAAGAGAGTCCCTAGAAGGGTAAGGAGATGGAAAGGATGTAAACACAGCATGTGGTaGAGCAGACCATGTAGAAGA | + |
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Preference number: 4 (lower is better) Translates to: DLLAGKRVPRRVRRWKGCKHSMW*SRPCRR Trigger: TCTTCTACATGGTCTGCTTCACCACATGCTGTGTTT...ACATCCTTTCCATCTCCTTACCCTTCTAGGGACTCTCTTCCCAGCTAGCAAATC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR GCA 90 bp | CTTTCCACATTATGCATTATAAAATTAGGCAAGTCTCCTGGCTTGCTGCCTTCTCCCAGAGCTCCTCTTTaGCGGAAGTCACAGTTCTGG | + |
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Preference number: 4 (lower is better) Translates to: LSTLCIIKLGKSPGLLPSPRAPL*RKSQFW Trigger: CCAGAACTGTGACTTCCGGCAAAGAGGAGCTCTGGG...AGAAGGCAGCAAGCCAGGAGACTTGCCTAATTTTATAATGCATAATGTGGAAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CCA 90 bp | AAAGCAACTACAATCAATTCCCGGAGAGGAAGTAAAATAATGGTTAGTGAGGACAAGGGGCCCAGCATCTaGAATCCTCGGGCGAAGTAC | + |
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Preference number: 4 (lower is better) Translates to: KATTINSRRGSKIMVSEDKGPSI*NPRAKY Trigger: GTACTTCGCCCGAGGATTCCAGATGCTGGGCCCCTT...GTCCTCACTAACCATTATTTTACTTCCTCTCCGGGAATTGATTGTAGTTGCTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR TCA 90 bp | CTTGTACAATCCTCCTTAGATAAAGCAACTACAATCAATTCCCGGAGAGGAAGTACAGTGTGGACTCTGTaGCCAAGTATGGAGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: LVQSSLDKATTINSRRGSTVWTL*PSMEQP Trigger: AGGCTGCTCCATACTTGGTCACAGAGTCCACACTGT...ACTTCCTCTCCGGGAATTGATTGTAGTTGCTTTATCTAAGGAGGATTGTACAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR TCA 90 bp | GCTTTAGAGGAACTGAAAAGGTACATACAACACTTGATGACCATTGCCCATCTCATGTGCAGTGCAGTCTaGCCTACAAATGGCTCACAC | + |
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Preference number: 4 (lower is better) Translates to: ALEELKRYIQHLMTIAHLMCSAV*PTNGSH Trigger: GTGTGAGCCATTTGTAGGTCAGACTGCACTGCACAT...GAGATGGGCAATGGTCATCAAGTGTTGTATGTACCTTTTCAGTTCCTCTAAAGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CCA 90 bp | GATTTGCTAGCTGGGAAGAGAGTCCCTAGAAGGGTAAGGAGATGGAAAGGATGTTTCCCCCAGATTATCTaGATCCTCTGTCTGGAAAAT | + |
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Preference number: 4 (lower is better) Translates to: DLLAGKRVPRRVRRWKGCFPQII*ILCLEN Trigger: ATTTTCCAGACAGAGGATCCAGATAATCTGGGGGAA...ACATCCTTTCCATCTCCTTACCCTTCTAGGGACTCTCTTCCCAGCTAGCAAATC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CCA 90 bp | CTTTCCACATTATGCATTATAAAATTAGGCAAGTCTCCTGGCTTGCTGCCTTCTCCAGCATCACTGTGGTaGCTACAACTTGTGCTCTCC | + |
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Preference number: 4 (lower is better) Translates to: LSTLCIIKLGKSPGLLPSPASLW*LQLVLS Trigger: GGAGAGCACAAGTTGTAGCCACCACAGTGATGCTGG...AGAAGGCAGCAAGCCAGGAGACTTGCCTAATTTTATAATGCATAATGTGGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR GCA 90 bp | GGCTCTCAGGATATGAGCTTTAGAGGAACTGAAAAGGTACATACAACACTTGATGACTGCGATGTGCAGTaGAGTCTGACCTACAAATGG | + |
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Preference number: 4 (lower is better) Translates to: GSQDMSFRGTEKVHTTLDDCDVQ*SLTYKW Trigger: CCATTTGTAGGTCAGACTGCACTGCACATCGCAGTC...ATCAAGTGTTGTATGTACCTTTTCAGTTCCTCTAAAGCTCATATCCTGAGAGCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR GCA 90 bp | CTTGTACAATCCTCCTTAGATAAAGCAACTACAATCAATTCCCGGAGAGGAAGTGAAACATCACTGTGTTaGCTTCCACCCCAGCCAACT | + |
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Preference number: 4 (lower is better) Translates to: LVQSSLDKATTINSRRGSETSLC*LPPQPT Trigger: AGTTGGCTGGGGTGGAAGGCAACACAGTGATGTTTC...ACTTCCTCTCCGGGAATTGATTGTAGTTGCTTTATCTAAGGAGGATTGTACAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CCA 90 bp | CTTTCCACATTATGCATTATAAAATTAGGCAAGTCTCCTGGCTTGCTGCCTTCTGGATTCTGCTCCTGGTaGTGTTCAACCCGTAAGAAC | + |
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Preference number: 4 (lower is better) Translates to: LSTLCIIKLGKSPGLLPSGFCSW*CSTRKN Trigger: GTTCTTACGGGTTGAACACCACCAGGAGCAGAATCC...AGAAGGCAGCAAGCCAGGAGACTTGCCTAATTTTATAATGCATAATGTGGAAAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR TCA 90 bp | GCTTTAGAGGAACTGAAAAGGTACATACAACACTTGATGACCATTGCCCATCTCCAGTTCTGGTCATGCTaGAGTTTCTTAAGTGTGCAC | + |
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Preference number: 4 (lower is better) Translates to: ALEELKRYIQHLMTIAHLQFWSC*SFLSVH Trigger: GTGCACACTTAAGAAACTTCAGCATGACCAGAACTG...GAGATGGGCAATGGTCATCAAGTGTTGTATGTACCTTTTCAGTTCCTCTAAAGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR TCA 90 bp | CTTGTACAATCCTCCTTAGATAAAGCAACTACAATCAATTCCCGGAGAGGAAGTAGGAGTCAATCTCTGTaGGGTCATAGAGGGAAGATG | + |
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Preference number: 4 (lower is better) Translates to: LVQSSLDKATTINSRRGSRSQSL*GHRGKM Trigger: CATCTTCCCTCTATGACCTCACAGAGATTGACTCCT...ACTTCCTCTCCGGGAATTGATTGTAGTTGCTTTATCTAAGGAGGATTGTACAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CCA 90 bp | GTACAATCCTCCTTAGATAAAGCAACTACAATCAATTCCCGGAGAGGAAGTAAACTCTGTGACCAAGTATaGAGCAGCCTCCATCAGCAT | + |
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Preference number: 4 (lower is better) Translates to: VQSSLDKATTINSRRGSKLCDQV*SSLHQH Trigger: ATGCTGATGGAGGCTGCTCCATACTTGGTCACAGAG...TTTACTTCCTCTCCGGGAATTGATTGTAGTTGCTTTATCTAAGGAGGATTGTAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CCA 90 bp | CTTTCCACATTATGCATTATAAAATTAGGCAAGTCTCCTGGCTTGCTGCCTTCTGAGCCTCTTTCTTCTTaGAGGAAACCACAAGCTCCA | + |
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Preference number: 4 (lower is better) Translates to: LSTLCIIKLGKSPGLLPSEPLSS*RKPQAP Trigger: TGGAGCTTGTGGTTTCCTCCAAGAAGAAAGAGGCTC...AGAAGGCAGCAAGCCAGGAGACTTGCCTAATTTTATAATGCATAATGTGGAAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CCA 90 bp | CTTTCCACATTATGCATTATAAAATTAGGCAAGTCTCCTGGCTTGCTGCCTTCTGATGATGACATGGAATaGGCCCCCAAGAACTGTTTG | + |
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Preference number: 4 (lower is better) Translates to: LSTLCIIKLGKSPGLLPSDDDME*APKNCL Trigger: CAAACAGTTCTTGGGGGCCCATTCCATGTCATCATC...AGAAGGCAGCAAGCCAGGAGACTTGCCTAATTTTATAATGCATAATGTGGAAAG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CCA 90 bp | GCTTTAGAGGAACTGAAAAGGTACATACAACACTTGATGACCATTGCCCATCTCGTAATGATGATGACATaGAATGGGCCCCCAAGAACT | + |
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Preference number: 4 (lower is better) Translates to: ALEELKRYIQHLMTIAHLVMMMT*NGPPRT Trigger: AGTTCTTGGGGGCCCATTCCATGTCATCATCATTAC...GAGATGGGCAATGGTCATCAAGTGTTGTATGTACCTTTTCAGTTCCTCTAAAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR TCA 90 bp | CATACAACACTTGATGACCATTGCCCATCTCTACAAATGCTCAAATGTGAAATAGAGAGGCACCAACTCTaGAGATGTCTGGGATCTCTA | + |
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Preference number: 4 (lower is better) Translates to: HTTLDDHCPSLQMLKCEIERHQL*RCLGSL Trigger: TAGAGATCCCAGACATCTTCAGAGTTGGTGCCTCTC...TATTTCACATTTGAGCATTTGTAGAGATGGGCAATGGTCATCAAGTGTTGTATG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR TCA 90 bp | GTACAATCCTCCTTAGATAAAGCAACTACAATCAATTCCCGGAGAGGAAGTAAAAATGATATAGAAGGCTaGGGCAAATCCCAGGATGAC | + |
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Preference number: 4 (lower is better) Translates to: VQSSLDKATTINSRRGSKNDIEG*GKSQDD Trigger: GTCATCCTGGGATTTGCCTCAGCCTTCTATATCATT...TTTACTTCCTCTCCGGGAATTGATTGTAGTTGCTTTATCTAAGGAGGATTGTAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR GCA 90 bp | ACACTTGATGACCATTGCCCATCTCTACAAATGCTCAAATGTGAAATATTGCTGATCATTTTCCTTGGCTaGTCTAAGCAGTGGAGACTC | + |
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Preference number: 4 (lower is better) Translates to: TLDDHCPSLQMLKCEILLIIFLG*SKQWRL Trigger: GAGTCTCCACTGCTTAGAGCAGCCAAGGAAAATGAT...CAGCAATATTTCACATTTGAGCATTTGTAGAGATGGGCAATGGTCATCAAGTGT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CCA 90 bp | AAAGCAACTACAATCAATTCCCGGAGAGGAAGTAAAATAATGGTTAGTGAGGACGGCTGCTCTAAGCAGTaGAGACTCCCAAATACTTTT | + |
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Preference number: 4 (lower is better) Translates to: KATTINSRRGSKIMVSEDGCSKQ*RLPNTF Trigger: AAAAGTATTTGGGAGTCTCCACTGCTTAGAGCAGCC...GTCCTCACTAACCATTATTTTACTTCCTCTCCGGGAATTGATTGTAGTTGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR GCA 90 bp | GGCTCTCAGGATATGAGCTTTAGAGGAACTGAAAAGGTACATACAACACTTGATTGTTTCTCAGATAGCTaGTCTTGTACTTCCTCTTTG | + |
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Preference number: 4 (lower is better) Translates to: GSQDMSFRGTEKVHTTLDCFSDS*SCTSSL Trigger: CAAAGAGGAAGTACAAGAGCAGCTATCTGAGAAACA...ATCAAGTGTTGTATGTACCTTTTCAGTTCCTCTAAAGCTCATATCCTGAGAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CCA 90 bp | CATACAACACTTGATGACCATTGCCCATCTCTACAAATGCTCAAATGTGAAATAACTAGGTTCACATTCTaGTTCATGACTGCGATGTGC | + |
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Preference number: 4 (lower is better) Translates to: HTTLDDHCPSLQMLKCEITRFTF*FMTAMC Trigger: GCACATCGCAGTCATGAACCAGAATGTGAACCTAGT...TATTTCACATTTGAGCATTTGTAGAGATGGGCAATGGTCATCAAGTGTTGTATG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| 3UTR CAA 72 bp | ACATTATGCATTATAAAATTAGGCAAGTCTCCTGGCTaGCTGCCTTCTGCCTTCTGTTCAAGGCATAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: TLCIIKLGKSPG*LPSAFCSRHKK Trigger: TTTCTTATGCCTTGAACAGAAGGCAGAAGGCAGCAAGCCAGGAGACTTGCCTAATTTTATAATGCATAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR TCA 90 bp | GTACAATCCTCCTTAGATAAAGCAACTACAATCAATTCCCGGAGAGGAAGTAAACCAAAAATCATCTTCTaGATCATGATTGTGAAGGGG | + |
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Preference number: 4 (lower is better) Translates to: VQSSLDKATTINSRRGSKPKIIF*IMIVKG Trigger: CCCCTTCACAATCATGATTCAGAAGATGATTTTTGG...TTTACTTCCTCTCCGGGAATTGATTGTAGTTGCTTTATCTAAGGAGGATTGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR TCA 90 bp | GTACAATCCTCCTTAGATAAAGCAACTACAATCAATTCCCGGAGAGGAAGTAAATACTTCCTCTTTGTCTaGAGATTTGAAAGCTTCCAC | + |
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Preference number: 4 (lower is better) Translates to: VQSSLDKATTINSRRGSKYFLFV*RFESFH Trigger: GTGGAAGCTTTCAAATCTTCAGACAAAGAGGAAGTA...TTTACTTCCTCTCCGGGAATTGATTGTAGTTGCTTTATCTAAGGAGGATTGTAC 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR TCA 90 bp | AAAGCAACTACAATCAATTCCCGGAGAGGAAGTAAAATAATGGTTAGTGAGGACCTTTGTCTGAAGATTTaGAAGCTTCCACATATCGAA | + |
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Preference number: 4 (lower is better) Translates to: KATTINSRRGSKIMVSEDLCLKI*KLPHIE Trigger: TTCGATATGTGGAAGCTTTCAAATCTTCAGACAAAG...GTCCTCACTAACCATTATTTTACTTCCTCTCCGGGAATTGATTGTAGTTGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS CCA 90 bp | ACTGTGTTGCCTTCCACCCCAGCCAACTTGAAGGGGGTGAGTCCCTaGTTGTTGGGCACAAGCTCCAGGGACTTCAGGTGGTCTCCTCCA | + |
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Preference number: 5 (lower is better) Translates to: TVLPSTPANLKGVSP*LLGTSSRDFRWSPP Trigger: TGGAGGAGACCACCTGAAGTCCCTGGAGCTTGTGCCCAACAACCAGGGACTCACCCCCTTCAAGTTGGCTGGGGTGGAAGGCAACACAGT 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031901.11 ENSMUST00000193503.2 |
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| CDS-3UTR CAA 90 bp | CCAGCTATTCATAACCATAGAATTCAAACTCTTGCAAAGCAGCTCTCTTCTCCCGGGGTGAGTCCCTGGTaGTTGGGCACAAGCTCCAGG | + |
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Preference number: 5 (lower is better) Translates to: PAIHNHRIQTLAKQLSSPGVSPW*LGTSSR Trigger: CCTGGAGCTTGTGCCCAACAACCAGGGACTCACCCC...GGGAGAAGAGAGCTGCTTTGCAAGAGTTTGAATTCTATGGTTATGAATAGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS CCA 90 bp | TTCAAATGTCCCAGGGTGTTTCGACGGAGAATTTCCCATCCACGGTaGCTATTGCTGCTTAGGGATGTAGTCCTGGACAAAGGAGGTGTT | + |
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Preference number: 5 (lower is better) Translates to: FKCPRVFRRRISHPR*LLLLRDVVLDKGGV Trigger: AACACCTCCTTTGTCCAGGACTACATCCCTAAGCAGCAATAGCCACCGTGGATGGGAAATTCTCCGTCGAAACACCCTGGGACATTTGAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031901.11 ENSMUST00000193503.2 |
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| CDS-3UTR CAA 90 bp | CCAGCTATTCATAACCATAGAATTCAAACTCTTGCAAAGCAGCTCTCTTCTCCCTCCCAGAGCTCCTCTTaGCCGGAAGTCACAGTTCTG | + |
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Preference number: 5 (lower is better) Translates to: PAIHNHRIQTLAKQLSSPSQSSS*PEVTVL Trigger: CAGAACTGTGACTTCCGGCAAAGAGGAGCTCTGGGA...GGGAGAAGAGAGCTGCTTTGCAAGAGTTTGAATTCTATGGTTATGAATAGCTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CAA 90 bp | GCTTTAGAGGAACTGAAAAGGTACATACAACACTTGATGACCATTGCCCATCTCGCCCCCAAGAACTGTTaGTCCAAAGTAGCGAGAGGC | + |
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Preference number: 5 (lower is better) Translates to: ALEELKRYIQHLMTIAHLAPKNC*SKVARG Trigger: GCCTCTCGCTACTTTGGACAAACAGTTCTTGGGGGC...GAGATGGGCAATGGTCATCAAGTGTTGTATGTACCTTTTCAGTTCCTCTAAAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CAA 90 bp | CTTTCCACATTATGCATTATAAAATTAGGCAAGTCTCCTGGCTTGCTGCCTTCTCGAGCCTCTTTCTTCTaGGAGGAAACCACAAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: LSTLCIIKLGKSPGLLPSRASFF*EETTSS Trigger: GGAGCTTGTGGTTTCCTCCAAGAAGAAAGAGGCTCG...AGAAGGCAGCAAGCCAGGAGACTTGCCTAATTTTATAATGCATAATGTGGAAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CAA 90 bp | AAAGCAACTACAATCAATTCCCGGAGAGGAAGTAAAATAATGGTTAGTGAGGACGTGCTGGTTCCAGTCTaGGTCTCTGACCCACCAATT | + |
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Preference number: 5 (lower is better) Translates to: KATTINSRRGSKIMVSEDVLVPV*VSDPPI Trigger: AATTGGTGGGTCAGAGACCAAGACTGGAACCAGCAC...GTCCTCACTAACCATTATTTTACTTCCTCTCCGGGAATTGATTGTAGTTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CAA 90 bp | CCAGCTATTCATAACCATAGAATTCAAACTCTTGCAAAGCAGCTCTCTTCTCCCGAGAAGTTTCTGAAGTaGGATCCAAGGAGTTTTAGC | + |
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Preference number: 5 (lower is better) Translates to: PAIHNHRIQTLAKQLSSPEKFLK*DPRSFS Trigger: GCTAAAACTCCTTGGATCCAACTTCAGAAACTTCTC...GGGAGAAGAGAGCTGCTTTGCAAGAGTTTGAATTCTATGGTTATGAATAGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS-3UTR CAA 90 bp | CCAGCTATTCATAACCATAGAATTCAAACTCTTGCAAAGCAGCTCTCTTCTCCCTCTTTGTCTGAAGATTaGAAAGCTTCCACATATCGA | + |
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Preference number: 5 (lower is better) Translates to: PAIHNHRIQTLAKQLSSPSLSED*KASTYR Trigger: TCGATATGTGGAAGCTTTCAAATCTTCAGACAAAGA...GGGAGAAGAGAGCTGCTTTGCAAGAGTTTGAATTCTATGGTTATGAATAGCTGG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS CCA 72 bp | CCTTCCACCCCAGCCAACTTGAAGGGGGTGAGTCCCTaGTTGTTGGGCACAAGCTCCAGGGACTTCAGGTGG | + |
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Preference number: 6 (lower is better) Translates to: PSTPANLKGVSP*LLGTSSRDFRW Trigger: CCACCTGAAGTCCCTGGAGCTTGTGCCCAACAACCAGGGACTCACCCCCTTCAAGTTGGCTGGGGTGGAAGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031901.11 ENSMUST00000193503.2 |
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| CDS CAA 72 bp | ACCCCAGCCAACTTGAAGGGGGTGAGTCCCTGGTTGTaGGGCACAAGCTCCAGGGACTTCAGGTGGTCTCCT | + |
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Preference number: 6 (lower is better) Translates to: TPANLKGVSPWL*GTSSRDFRWSP Trigger: AGGAGACCACCTGAAGTCCCTGGAGCTTGTGCCCAACAACCAGGGACTCACCCCCTTCAAGTTGGCTGGGGT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031901.11 ENSMUST00000193503.2 |
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| CDS CAA 72 bp | TCCACCCCAGCCAACTTGAAGGGGGTGAGTCCCTGGTaGTTGGGCACAAGCTCCAGGGACTTCAGGTGGTCT | + |
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Preference number: 6 (lower is better) Translates to: STPANLKGVSPW*LGTSSRDFRWS Trigger: AGACCACCTGAAGTCCCTGGAGCTTGTGCCCAACAACCAGGGACTCACCCCCTTCAAGTTGGCTGGGGTGGA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031901.11 ENSMUST00000193503.2 |
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| CDS CAA 90 bp | GTGTTGCCTTCCACCCCAGCCAACTTGAAGGGGGTGAGTCCCTGGTaGTTGGGCACAAGCTCCAGGGACTTCAGGTGGTCTCCTCCATCA | + |
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Preference number: 6 (lower is better) Translates to: VLPSTPANLKGVSPW*LGTSSRDFRWSPPS Trigger: TGATGGAGGAGACCACCTGAAGTCCCTGGAGCTTGTGCCCAACAACCAGGGACTCACCCCCTTCAAGTTGGCTGGGGTGGAAGGCAACAC 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000031901.11 ENSMUST00000193503.2 |
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| CDS CAA 90 bp | TCTAGAATCTGTCGAGCCACTGTGTTGCCTTCCACCCCAGCCAACTaGAAGGGGGTGAGTCCCTGGTTGTTGGGCACAAGCTCCAGGGAC | + |
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Preference number: 6 (lower is better) Translates to: SRICRATVLPSTPAN*KGVSPWLLGTSSRD Trigger: GTCCCTGGAGCTTGTGCCCAACAACCAGGGACTCACCCCCTTCAAGTTGGCTGGGGTGGAAGGCAACACAGTGGCTCGACAGATTCTAGA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000193503.2 |
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| CDS CAA 90 bp | CCCAGCACCAGGGCCATGGACATGGGCACTACCTCGCCATTCACATaGGTAAGCCTCATTGCCATAGTCAGTAGCACAAGGGAGGCATAT | + |
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Preference number: 6 (lower is better) Translates to: PSTRAMDMGTTSPFT*VSLIAIVSSTREAY Trigger: ATATGCCTCCCTTGTGCTACTGACTATGGCAATGAGGCTTACCAATGTGAATGGCGAGGTAGTGCCCATGTCCATGGCCCTGGTGCTGGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031901.11 ENSMUST00000193503.2 |
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| CDS CCA 72 bp | CCCAGGGTGTTTCGACGGAGAATTTCCCATCCACGGTaGCTATTGCTGCTTAGGGATGTAGTCCTGGACAAA | + |
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Preference number: 6 (lower is better) Translates to: PRVFRRRISHPR*LLLLRDVVLDK Trigger: TTTGTCCAGGACTACATCCCTAAGCAGCAATAGCCACCGTGGATGGGAAATTCTCCGTCGAAACACCCTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031901.11 ENSMUST00000193503.2 |
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| CDS CAA 72 bp | AGGGCCATGGACATGGGCACTACCTCGCCATTCACATaGGTAAGCCTCATTGCCATAGTCAGTAGCACAAGG | + |
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Preference number: 6 (lower is better) Translates to: RAMDMGTTSPFT*VSLIAIVSSTR Trigger: CCTTGTGCTACTGACTATGGCAATGAGGCTTACCAATGTGAATGGCGAGGTAGTGCCCATGTCCATGGCCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031901.11 ENSMUST00000193503.2 |
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| CDS TCA 72 bp | GACCACTGGATGCGCTTCCGTTTCTGCATTAGATGTTaGAACATCACTGTGTTGCCTTCCACCCCAGCCAAC | + |
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Preference number: 6 (lower is better) Translates to: DHWMRFRFCIRC*NITVLPSTPAN Trigger: GTTGGCTGGGGTGGAAGGCAACACAGTGATGTTTCAACATCTAATGCAGAAACGGAAGCGCATCCAGTGGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS CAA 72 bp | GTGTTTCGACGGAGAATTTCCCATCCACGGTGGCTATaGCTGCTTAGGGATGTAGTCCTGGACAAAGGAGGT | + |
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Preference number: 6 (lower is better) Translates to: VFRRRISHPRWL*LLRDVVLDKGG Trigger: ACCTCCTTTGTCCAGGACTACATCCCTAAGCAGCAATAGCCACCGTGGATGGGAAATTCTCCGTCGAAACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031901.11 ENSMUST00000193503.2 |
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| CDS CCA 72 bp | AAATGGCTCACACAGTGTGGACTCTGTGACCAAGTATaGAGCAGCCTCCATCAGCATTATAGCAGCATCCAG | + |
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Preference number: 6 (lower is better) Translates to: KWLTQCGLCDQV*SSLHQHYSSIQ Trigger: CTGGATGCTGCTATAATGCTGATGGAGGCTGCTCCATACTTGGTCACAGAGTCCACACTGTGTGAGCCATTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031901.11 ENSMUST00000193503.2 |
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| CDS GCA 72 bp | AGAGGGAAGATGTTAGGGGCCCAAAGGACCACTGGATaGGCTTCCGTTTCTGCATTAGATGTTGAAACATCA | + |
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Preference number: 6 (lower is better) Translates to: RGKMLGAQRTTG*ASVSALDVETS Trigger: TGATGTTTCAACATCTAATGCAGAAACGGAAGCGCATCCAGTGGTCCTTTGGGCCCCTAACATCTTCCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000031901.11 |
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| CDS TCA 72 bp | GCTCCTCTTTGCCGGAAGTCACAGTTCTGGTCATGCTaGAGTTTCTTAAGTGTGCACATATCATTTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: APLCRKSQFWSC*SFLSVHISFSL Trigger: CAAGGAAAATGATATGTGCACACTTAAGAAACTTCAGCATGACCAGAACTGTGACTTCCGGCAAAGAGGAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000031901.11 ENSMUST00000193503.2 |
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| CDS TCA 72 bp | AAGTCACATATGCTTCCTGTAGTGATTTCTGTTCCATaGTGGTGTTATCTCGAACATGTGTACGGTTGGCAT | + |
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Preference number: 6 (lower is better) Translates to: KSHMLPVVISVP*WCYLEHVYGWH Trigger: ATGCCAACCGTACACATGTTCGAGATAACACCATCATGGAACAGAAATCACTACAGGAAGCATATGTGACTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031901.11 ENSMUST00000193503.2 |
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| CDS TCA 72 bp | ATAGCTGCTCTTGTACTTCCTCTTTGTCTGAAGATTTaGAAGCTTCCACATATCGAAGTACTCGATAAGGAT | + |
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Preference number: 6 (lower is better) Translates to: IAALVLPLCLKI*KLPHIEVLDKD Trigger: ATCCTTATCGAGTACTTCGATATGTGGAAGCTTTCAAATCTTCAGACAAAGAGGAAGTACAAGAGCAGCTAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000031901.11 ENSMUST00000193503.2 |
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