Pregenerated sensors for TRPV3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000043029Ensembl transcript IDs: ENSMUST00000049676.3
Found 221 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | GAAGGTTGTGCAGGTAGTGGCTGCTGCAGACTGGGCAGCTGTCCATaGTGTACCATCCACCACCATCTCTCCCACCAGGCCATTCAGGAT | + |
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Preference number: 1 (lower is better) Translates to: EGCAGSGCCRLGSCP*CTIHHHLSHQAIQD Trigger: ATCCTGAATGGCCTGGTGGGAGAGATGGTGGTGGATGGTACAGCATGGACAGCTGCCCAGTCTGCAGCAGCCACTACCTGCACAACCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR CCA 90 bp | CCACTCCTCAGACCCCAGTTCCTTCCTTCTCCAGCACGTATGTCTTaGAGCCAAGCCAACCTGCAGGTTCCTCACATGGGGCATCAGGAG | + |
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Preference number: 1 (lower is better) Translates to: PLLRPQFLPSPARMS*SQANLQVPHMGHQE Trigger: CTCCTGATGCCCCATGTGAGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAACTGGGGTCTGAGGAGTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR TCA 90 bp | ACATGTAAATCAACGCAGAAGTCAAGTATGGCTTACAGACTCTGGTaGGGGCCTGTCTCCCTGTGCCTCATCCAGAGCAAAGGGGGAGCA | + |
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Preference number: 1 (lower is better) Translates to: TCKSTQKSSMAYRLW*GPVSLCLIQSKGGA Trigger: TGCTCCCCCTTTGCTCTGGATGAGGCACAGGGAGACAGGCCCTCACCAGAGTCTGTAAGCCATACTTGACTTCTGCGTTGATTTACATGT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR GCA 90 bp | GGAAATGCAAAGCTACGTGGTTTGAACTACTGCCTTCCAAGGCAATaGAAAGCTGGAATCCCAGCTCCCTGGAACCAGCGGTTGCCCTTT | + |
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Preference number: 1 (lower is better) Translates to: GNAKLRGLNYCLPRQ*KAGIPAPWNQRLPF Trigger: AAAGGGCAACCGCTGGTTCCAGGGAGCTGGGATTCCAGCTTTGCATTGCCTTGGAAGGCAGTAGTTCAAACCACGTAGCTTTGCATTTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR CCA 90 bp | ATGCTGTACCATCCACCACCATCTCTCCCACCAGGCCATTCAGGATaGAATGACCAACTTTTCACCTGTCCAGCTATGCTGGTACTTGGA | + |
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Preference number: 1 (lower is better) Translates to: MLYHPPPSLPPGHSG*NDQLFTCPAMLVLG Trigger: TCCAAGTACCAGCATAGCTGGACAGGTGAAAAGTTGGTCATTCCATCCTGAATGGCCTGGTGGGAGAGATGGTGGTGGATGGTACAGCAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR GCA 90 bp | CAGAAAACAGTCTCCACAACACTTGAGAAGCTAGTTATTTCTATCTaGCCAACTTGCCACACCTTCCATCCAAGTGGGAAATGCAAAGCT | + |
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Preference number: 1 (lower is better) Translates to: QKTVSTTLEKLVISI*PTCHTFHPSGKCKA Trigger: AGCTTTGCATTTCCCACTTGGATGGAAGGTGTGGCAAGTTGGGCAGATAGAAATAACTAGCTTCTCAAGTGTTGTGGAGACTGTTTTCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR TCA 90 bp | GTGTGTGTGTGTGTAGAAACGTTTATTGTCCTGATCCTGGCCACCTaGAGCCTAGTATATAATACTTACATTCAGTCCAAAAGCCCAAAA | + |
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Preference number: 1 (lower is better) Translates to: VCVCVETFIVLILAT*SLVYNTYIQSKSPK Trigger: TTTTGGGCTTTTGGACTGAATGTAAGTATTATATACTAGGCTTCAGGTGGCCAGGATCAGGACAATAAACGTTTCTACACACACACACAC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR CAA 90 bp | CCCACTCCTCAGACCCCAGTTCCTTCCTTCTCCAGCACGTATGTCTaGGAGCCAAGCCAACCTGCAGGTTCCTCACATGGGGCATCAGGA | + |
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Preference number: 2 (lower is better) Translates to: PTPQTPVPSFSSTYV*EPSQPAGSSHGASG Trigger: TCCTGATGCCCCATGTGAGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAACTGGGGTCTGAGGAGTGGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR GCA 90 bp | CCATGCTGTACCATCCACCACCATCTCTCCCACCAGGCCATTCAGGATGGAATGGGAGCCAAGCCAACCTaGAGGTTCCTCACATGGGGC | + |
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Preference number: 2 (lower is better) Translates to: PCCTIHHHLSHQAIQDGMGAKPT*RFLTWG Trigger: GCCCCATGTGAGGAACCTGCAGGTTGGCTTGGCTCC...CATTCCATCCTGAATGGCCTGGTGGGAGAGATGGTGGTGGATGGTACAGCATGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR GCA 90 bp | CCATGCTGTACCATCCACCACCATCTCTCCCACCAGGCCATTCAGGATGGAATGCACCAGGGCTCAGCCTaGAGCATCAAACCACAGGGT | + |
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Preference number: 2 (lower is better) Translates to: PCCTIHHHLSHQAIQDGMHQGSA*SIKPQG Trigger: ACCCTGTGGTTTGATGCTGCAGGCTGAGCCCTGGTG...CATTCCATCCTGAATGGCCTGGTGGGAGAGATGGTGGTGGATGGTACAGCATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR TCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTTTCCCTTTCAGATCCTaGCTGCCACTCCTCAGCAGC | + |
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Preference number: 2 (lower is better) Translates to: RACNYYRSMLRPIPRKPLFPFRS*LPLLSS Trigger: GCTGCTGAGGAGTGGCAGTCAGGATCTGAAAGGGAA...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR CAA 90 bp | CCAAGGCAATGCAAAGCTGGAATCCCAGCTCCCTGGAACCAGCGGTaGCCCTTTAAACAGGGACTTCTGTTCAGGATAACTCAAGGAGAC | + |
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Preference number: 2 (lower is better) Translates to: PRQCKAGIPAPWNQR*PFKQGLLFRITQGD Trigger: GTCTCCTTGAGTTATCCTGAACAGAAGTCCCTGTTTAAAGGGCAACCGCTGGTTCCAGGGAGCTGGGATTCCAGCTTTGCATTGCCTTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR CCA 90 bp | CTAGCAGTGTGTTTTAGGCATCTGCTGATTTCCCCAGTGGGAAACACTGGAGTGCAGAACCGCTGGCCTTaGAATTGTCCTGACCTCTGG | + |
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Preference number: 2 (lower is better) Translates to: LAVCFRHLLISPVGNTGVQNRWP*NCPDLW Trigger: CCAGAGGTCAGGACAATTCCAAGGCCAGCGGTTCTG...CACTCCAGTGTTTCCCACTGGGGAAATCAGCAGATGCCTAAAACACACTGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR CCA 90 bp | AAGCTGGAATCCCAGCTCCCTGGAACCAGCGGTTGCCCTTTAAACAGGGACTTCCAGTTTCCTGTTTCCTaGAGGCTCAGTAAGGGCATT | + |
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Preference number: 2 (lower is better) Translates to: KLESQLPGTSGCPLNRDFQFPVS*RLSKGI Trigger: AATGCCCTTACTGAGCCTCCAGGAAACAGGAAACTG...GAAGTCCCTGTTTAAAGGGCAACCGCTGGTTCCAGGGAGCTGGGATTCCAGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR TCA 90 bp | AAGCTGGAATCCCAGCTCCCTGGAACCAGCGGTTGCCCTTTAAACAGGGACTTCCTTGCTAGCCATCTCTaGGTTTTAAGACCCTCTCAA | + |
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Preference number: 2 (lower is better) Translates to: KLESQLPGTSGCPLNRDFLASHL*VLRPSQ Trigger: TTGAGAGGGTCTTAAAACTCAGAGATGGCTAGCAAG...GAAGTCCCTGTTTAAAGGGCAACCGCTGGTTCCAGGGAGCTGGGATTCCAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR CCA 90 bp | CCATGCTGTACCATCCACCACCATCTCTCCCACCAGGCCATTCAGGATGGAATGTGGAACTTTCTAGAATaGAGAAACCTGCCAGAGTGG | + |
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Preference number: 2 (lower is better) Translates to: PCCTIHHHLSHQAIQDGMWNFLE*RNLPEW Trigger: CCACTCTGGCAGGTTTCTCCATTCTAGAAAGTTCCA...CATTCCATCCTGAATGGCCTGGTGGGAGAGATGGTGGTGGATGGTACAGCATGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR TCA 90 bp | CTAGCAGTGTGTTTTAGGCATCTGCTGATTTCCCCAGTGGGAAACACTGGAGTGAAACGTTTATTGTCCTaGTCCTGGCCACCTGAAGCC | + |
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Preference number: 2 (lower is better) Translates to: LAVCFRHLLISPVGNTGVKRLLS*SWPPEA Trigger: GGCTTCAGGTGGCCAGGATCAGGACAATAAACGTTT...CACTCCAGTGTTTCCCACTGGGGAAATCAGCAGATGCCTAAAACACACTGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR TCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTCCATTCAGGATGGAATaGCCAACTTTTCACCTGTCC | + |
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Preference number: 2 (lower is better) Translates to: RACNYYRSMLRPIPRKPLPFRME*PTFHLS Trigger: GGACAGGTGAAAAGTTGGTCATTCCATCCTGAATGG...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR CCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTCCAGGCCATTCAGGATaGAATGACCAACTTTTCACC | + |
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Preference number: 2 (lower is better) Translates to: RACNYYRSMLRPIPRKPLPGHSG*NDQLFT Trigger: GGTGAAAAGTTGGTCATTCCATCCTGAATGGCCTGG...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR GCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTTCTAGTTTAGCACTCTaGATAGCACTTCAGCACACC | + |
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Preference number: 2 (lower is better) Translates to: RACNYYRSMLRPIPRKPLSSLAL*IALQHT Trigger: GGTGTGCTGAAGTGCTATGCAGAGTGCTAAACTAGA...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR CCA 90 bp | CTAGTCATTGGAGAAATTCTCCAATCTCCACCTCTACTCTACCAAACTGACTCTCCAGCACGTATGTCTTaGAGCCAAGCCAACCTGCAG | + |
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Preference number: 2 (lower is better) Translates to: LVIGEILQSPPLLYQTDSPARMS*SQANLQ Trigger: CTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGG...AGAGTCAGTTTGGTAGAGTAGAGGTGGAGATTGGAGAATTTCTCCAATGACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR TCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTGGTCCCACATTTAGATaGATAGCCAATTCAGAAATG | + |
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Preference number: 2 (lower is better) Translates to: RACNYYRSMLRPIPRKPLGPTFR*IANSEM Trigger: CATTTCTGAATTGGCTATTCATCTAAATGTGGGACC...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR GCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTCCAATGATTAAAAACTaGAGAAATATCCCTGTGGCC | + |
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Preference number: 2 (lower is better) Translates to: RACNYYRSMLRPIPRKPLPMIKN*RNIPVA Trigger: GGCCACAGGGATATTTCTGCAGTTTTTAATCATTGG...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR TCA 90 bp | CTAGTCATTGGAGAAATTCTCCAATCTCCACCTCTACTCTACCAAACTGACTCTCTGACTCAGATAAAGTaGGGCCAGCACTGGATGAGA | + |
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Preference number: 2 (lower is better) Translates to: LVIGEILQSPPLLYQTDSLTQIK*GQHWMR Trigger: TCTCATCCAGTGCTGGCCTCACTTTATCTGAGTCAG...AGAGTCAGTTTGGTAGAGTAGAGGTGGAGATTGGAGAATTTCTCCAATGACTAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR CAA 90 bp | GATAGGCCAACAAGAGTCAGTGGTGTGTGTGTATTCTTGCTATCTTaGTTGTTATTGTGTGGCTTTAGGCACATTGGATCTTTAGACTTG | + |
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Preference number: 2 (lower is better) Translates to: DRPTRVSGVCVFLLS*LLLCGFRHIGSLDL Trigger: CAAGTCTAAAGATCCAATGTGCCTAAAGCCACACAATAACAACAAAGATAGCAAGAATACACACACACCACTGACTCTTGTTGGCCTATC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR CAA 90 bp | AAAATAAAAACTTTGTGTCAGTTACACTATTTAAGCATCTCTCAGTaGGAGATAGGTTTAGCCTTGGATTTCAATCCAAGGATAGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: KIKTLCQLHYLSISQ*EIGLALDFNPRIES Trigger: GGACTCTATCCTTGGATTGAAATCCAAGGCTAAACCTATCTCCAACTGAGAGATGCTTAAATAGTGTAACTGACACAAAGTTTTTATTTT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR GCA 72 bp | GCAGGTAGTGGCTGCTGCAGACTGGGCAGCTGTCCATaGTGTACCATCCACCACCATCTCTCCCACCAGGCC | + |
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Preference number: 3 (lower is better) Translates to: AGSGCCRLGSCP*CTIHHHLSHQA Trigger: GGCCTGGTGGGAGAGATGGTGGTGGATGGTACAGCATGGACAGCTGCCCAGTCTGCAGCAGCCACTACCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR CAA 90 bp | AAGCTGGAATCCCAGCTCCCTGGAACCAGCGGTTGCCCTTTAAACAGGGACTTCTCCAGCACGTATGTCTaGGAGCCAAGCCAACCTGCA | + |
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Preference number: 3 (lower is better) Translates to: KLESQLPGTSGCPLNRDFSSTYV*EPSQPA Trigger: TGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGA...GAAGTCCCTGTTTAAAGGGCAACCGCTGGTTCCAGGGAGCTGGGATTCCAGCTT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR GCA 72 bp | GCAATAGAGAATCCAGAAGGTTGTGCAGGTAGTGGCTaGTGCAGACTGGGCAGCTGTCCATGCTGTACCATC | + |
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Preference number: 3 (lower is better) Translates to: AIENPEGCAGSG*CRLGSCPCCTI Trigger: GATGGTACAGCATGGACAGCTGCCCAGTCTGCAGCAGCCACTACCTGCACAACCTTCTGGATTCTCTATTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR GCA 72 bp | AAGCTACGTGGTTTGAACTACTGCCTTCCAAGGCAATaGAAAGCTGGAATCCCAGCTCCCTGGAACCAGCGG | + |
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Preference number: 3 (lower is better) Translates to: KLRGLNYCLPRQ*KAGIPAPWNQR Trigger: CCGCTGGTTCCAGGGAGCTGGGATTCCAGCTTTGCATTGCCTTGGAAGGCAGTAGTTCAAACCACGTAGCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR CCA 72 bp | GCATCAGGAGACTTCCAGACTCAGAACCGCTGGCCTTaGAATTGTCCTGACCTCTGGAGTCACACAACCCAA | + |
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Preference number: 3 (lower is better) Translates to: ASGDFQTQNRWP*NCPDLWSHTTQ Trigger: TTGGGTTGTGTGACTCCAGAGGTCAGGACAATTCCAAGGCCAGCGGTTCTGAGTCTGGAAGTCTCCTGATGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR CCA 72 bp | AAAGTGAGGCCAGCACTGGATGAGACTCAAAGAGGATaGACCCCAAACCTTTCCCCCAGATCACAGCCTGTC | + |
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Preference number: 3 (lower is better) Translates to: KVRPALDETQRG*TPNLSPRSQPV Trigger: GACAGGCTGTGATCTGGGGGAAAGGTTTGGGGTCCATCCTCTTTGAGTCTCATCCAGTGCTGGCCTCACTTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR CCA 72 bp | TGGTTTGAACTACTGCCTTCCAAGGCAATGCAAAGCTaGAATCCCAGCTCCCTGGAACCAGCGGTTGCCCTT | + |
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Preference number: 3 (lower is better) Translates to: WFELLPSKAMQS*NPSSLEPAVAL Trigger: AAGGGCAACCGCTGGTTCCAGGGAGCTGGGATTCCAGCTTTGCATTGCCTTGGAAGGCAGTAGTTCAAACCA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR TCA 72 bp | TCAACGCAGAAGTCAAGTATGGCTTACAGACTCTGGTaGGGGCCTGTCTCCCTGTGCCTCATCCAGAGCAAA | + |
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Preference number: 3 (lower is better) Translates to: STQKSSMAYRLW*GPVSLCLIQSK Trigger: TTTGCTCTGGATGAGGCACAGGGAGACAGGCCCTCACCAGAGTCTGTAAGCCATACTTGACTTCTGCGTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR CCA 72 bp | AGTAGACCCAACTTAGCTCAGGTCCTCTACACACGCTaGGACAGGGTCCCCTACAAATTCAGGAAGCACAGT | + |
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Preference number: 3 (lower is better) Translates to: SRPNLAQVLYTR*DRVPYKFRKHS Trigger: ACTGTGCTTCCTGAATTTGTAGGGGACCCTGTCCCAGCGTGTGTAGAGGACCTGAGCTAAGTTGGGTCTACT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR CCA 72 bp | CATCCACCACCATCTCTCCCACCAGGCCATTCAGGATaGAATGACCAACTTTTCACCTGTCCAGCTATGCTG | + |
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Preference number: 3 (lower is better) Translates to: HPPPSLPPGHSG*NDQLFTCPAML Trigger: CAGCATAGCTGGACAGGTGAAAAGTTGGTCATTCCATCCTGAATGGCCTGGTGGGAGAGATGGTGGTGGATG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR TCA 72 bp | TACTGCACTCTCGTGGGCAGATGCCTGAGAGCTCAATaGCTTCACAGTACAGCTTTTATTCCTTCTCCCCAC | + |
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Preference number: 3 (lower is better) Translates to: YCTLVGRCLRAQ*LHSTAFIPSPH Trigger: GTGGGGAGAAGGAATAAAAGCTGTACTGTGAAGTCATTGAGCTCTCAGGCATCTGCCCACGAGAGTGCAGTA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR CCA 72 bp | AGGGTCCCCTACAAATTCAGGAAGCACAGTCATAGTTaGGGAGATAAAGGAGGAAGGAGTCTGTGGGCAGAA | + |
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Preference number: 3 (lower is better) Translates to: RVPYKFRKHSHS*GDKGGRSLWAE Trigger: TTCTGCCCACAGACTCCTTCCTCCTTTATCTCCCCAACTATGACTGTGCTTCCTGAATTTGTAGGGGACCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR CAA 90 bp | ACCTTTCCCCCAGATCACAGCCTGTCTCCCTCAGGCTTTGTGTGTGTGTGTGTGGAGATAGGTTTAGCCTaGGATTTCAATCCAAGGATA | + |
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Preference number: 3 (lower is better) Translates to: TFPPDHSLSPSGFVCVCVEIGLA*DFNPRI Trigger: TATCCTTGGATTGAAATCCAAGGCTAAACCTATCTC...CACACACACACACACAAAGCCTGAGGGAGACAGGCTGTGATCTGGGGGAAAGGT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR GCA 72 bp | CCTGTGGCCCAGAAATCAGGGTATCCTAGCCTCACCTaGTCTGACATGACTTTGAACAAGTCTATGTTCATT | + |
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Preference number: 3 (lower is better) Translates to: PVAQKSGYPSLT*SDMTLNKSMFI Trigger: AATGAACATAGACTTGTTCAAAGTCATGTCAGAGCAGGTGAGGCTAGGATACCCTGATTTCTGGGCCACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR CCA 72 bp | CTGTCCAGCTATGCTGGTACTTGGAACTTTCTAGAATaGAGAAACCTGCCAGAGTGGACTGCTTTCTTTGTC | + |
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Preference number: 3 (lower is better) Translates to: LSSYAGTWNFLE*RNLPEWTAFFV Trigger: GACAAAGAAAGCAGTCCACTCTGGCAGGTTTCTCCATTCTAGAAAGTTCCAAGTACCAGCATAGCTGGACAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR-3UTR CAA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTGGTGTGTGTGTATTCTaGCTATCTTTGTTGTTATTG | + |
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Preference number: 3 (lower is better) Translates to: RACNYYRSMLRPIPRKPLGVCVF*LSLLLL Trigger: CAATAACAACAAAGATAGCAAGAATACACACACACC...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR TCA 72 bp | TCAATAGGTCAGCTGCTATTTCTGACTCAGATAAAGTaGGGCCAGCACTGGATGAGACTCAAAGAGGATGGA | + |
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Preference number: 3 (lower is better) Translates to: SIGQLLFLTQIK*GQHWMRLKEDG Trigger: TCCATCCTCTTTGAGTCTCATCCAGTGCTGGCCTCACTTTATCTGAGTCAGAAATAGCAGCTGACCTATTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR CCA 72 bp | GATGGAATGACCAACTTTTCACCTGTCCAGCTATGCTaGTACTTGGAACTTTCTAGAATGGAGAAACCTGCC | + |
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Preference number: 3 (lower is better) Translates to: DGMTNFSPVQLC*YLELSRMEKPA Trigger: GGCAGGTTTCTCCATTCTAGAAAGTTCCAAGTACCAGCATAGCTGGACAGGTGAAAAGTTGGTCATTCCATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR GCA 72 bp | GAACTTTCTAGAATGGAGAAACCTGCCAGAGTGGACTaGTTTCTTTGTCTGGTCTCTAGTCTGATTAGCTCA | + |
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Preference number: 3 (lower is better) Translates to: ELSRMEKPARVD*FLCLVSSLISS Trigger: TGAGCTAATCAGACTAGAGACCAGACAAAGAAAGCAGTCCACTCTGGCAGGTTTCTCCATTCTAGAAAGTTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR GCA 72 bp | CAGGATGGAATGACCAACTTTTCACCTGTCCAGCTATaGTGGTACTTGGAACTTTCTAGAATGGAGAAACCT | + |
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Preference number: 3 (lower is better) Translates to: QDGMTNFSPVQL*WYLELSRMEKP Trigger: AGGTTTCTCCATTCTAGAAAGTTCCAAGTACCAGCATAGCTGGACAGGTGAAAAGTTGGTCATTCCATCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR TCA 72 bp | ATGCTTTGTCATCTTCCCCTACTTGAGTGTGATCTTTaGGCAATAGAGAATCCAGAAGGTTGTGCAGGTAGT | + |
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Preference number: 3 (lower is better) Translates to: MLCHLPLLECDL*AIENPEGCAGS Trigger: ACTACCTGCACAACCTTCTGGATTCTCTATTGCTCAAAGATCACACTCAAGTAGGGGAAGATGACAAAGCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR TCA 72 bp | TGTGTAGAAACGTTTATTGTCCTGATCCTGGCCACCTaGAGCCTAGTATATAATACTTACATTCAGTCCAAA | + |
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Preference number: 3 (lower is better) Translates to: CVETFIVLILAT*SLVYNTYIQSK Trigger: TTTGGACTGAATGTAAGTATTATATACTAGGCTTCAGGTGGCCAGGATCAGGACAATAAACGTTTCTACACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CCA 90 bp | AAGCTGGAATCCCAGCTCCCTGGAACCAGCGGTTGCCCTTTAAACAGGGACTTCGCTGTGATGTCTCCCTaGCGCCGCTCGATGGCGATG | + |
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Preference number: 4 (lower is better) Translates to: KLESQLPGTSGCPLNRDFAVMSP*RRSMAM Trigger: CATCGCCATCGAGCGGCGCCAGGGAGACATCACAGC...GAAGTCCCTGTTTAAAGGGCAACCGCTGGTTCCAGGGAGCTGGGATTCCAGCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR TCA 90 bp | AAGCTGGAATCCCAGCTCCCTGGAACCAGCGGTTGCCCTTTAAACAGGGACTTCGTGGAGAGGTCTTGGTaGCCGTGGGGTTGGGCTCAA | + |
|
Preference number: 4 (lower is better) Translates to: KLESQLPGTSGCPLNRDFVERSW*PWGWAQ Trigger: TTGAGCCCAACCCCACGGTCACCAAGACCTCTCCAC...GAAGTCCCTGTTTAAAGGGCAACCGCTGGTTCCAGGGAGCTGGGATTCCAGCTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR TCA 90 bp | AAGCTGGAATCCCAGCTCCCTGGAACCAGCGGTTGCCCTTTAAACAGGGACTTCAAGACCCCCTTGGCGTaGGCATTGACGTCAGCACCC | + |
|
Preference number: 4 (lower is better) Translates to: KLESQLPGTSGCPLNRDFKTPLA*ALTSAP Trigger: GGGTGCTGACGTCAATGCTCACGCCAAGGGGGTCTT...GAAGTCCCTGTTTAAAGGGCAACCGCTGGTTCCAGGGAGCTGGGATTCCAGCTT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR TCA 90 bp | ACCTTTCCCCCAGATCACAGCCTGTCTCCCTCAGGCTTTGTGTGTGTGTGTGTGGGTCTTCCCGGTGTCTaGGGCTGTCAGCTTGTGCAT | + |
|
Preference number: 4 (lower is better) Translates to: TFPPDHSLSPSGFVCVCVGLPGV*GCQLVH Trigger: ATGCACAAGCTGACAGCCTCAGACACCGGGAAGACC...CACACACACACACACAAAGCCTGAGGGAGACAGGCTGTGATCTGGGGGAAAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR TCA 90 bp | ACCTTTCCCCCAGATCACAGCCTGTCTCCCTCAGGCTTTGTGTGTGTGTGTGTGCATACGCCCAGTCCGTaGACTTCCTGGACAAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: TFPPDHSLSPSGFVCVCVHTPSP*TSWTSS Trigger: GGAGCTTGTCCAGGAAGTTCACGGACTGGGCGTATG...CACACACACACACACAAAGCCTGAGGGAGACAGGCTGTGATCTGGGGGAAAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR GCA 90 bp | CATAGCACTTCAGCACACCAGGGCTCAGCCTGCAGCATCAAACCACAGGGTTCAACTGTCACCAGCGCGTaGAGGATGTTGTTTCCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: HSTSAHQGSACSIKPQGSTVTSA*RMLFPR Trigger: CCGGGGAAACAACATCCTGCACGCGCTGGTGACAGT...TGAACCCTGTGGTTTGATGCTGCAGGCTGAGCCCTGGTGTGCTGAAGTGCTATG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR GCA 90 bp | CCATGCTGTACCATCCACCACCATCTCTCCCACCAGGCCATTCAGGATGGAATGATCTTGGCAGCCAGCTaGAGTGGTGTGAGCCCATCG | + |
|
Preference number: 4 (lower is better) Translates to: PCCTIHHHLSHQAIQDGMILAAS*SGVSPS Trigger: CGATGGGCTCACACCACTGCAGCTGGCTGCCAAGAT...CATTCCATCCTGAATGGCCTGGTGGGAGAGATGGTGGTGGATGGTACAGCATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR GCA 90 bp | CATAGCACTTCAGCACACCAGGGCTCAGCCTGCAGCATCAAACCACAGGGTTCAATGGTCCTGGCTCTCTaGAAGCGCCAGATCCGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: HSTSAHQGSACSIKPQGSMVLAL*KRQIRS Trigger: TGAGCGGATCTGGCGCTTGCAGAGAGCCAGGACCAT...TGAACCCTGTGGTTTGATGCTGCAGGCTGAGCCCTGGTGTGCTGAAGTGCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTCCTGGCGCCGCTCGATaGCGATGTTCAGCGCTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: RACNYYRSMLRPIPRKPLPGAAR*RCSALS Trigger: AGACAGCGCTGAACATCGCCATCGAGCGGCGCCAGG...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| 3UTR CAA 72 bp | CAGACCCCAGTTCCTTCCTTCTCCAGCACGTATGTCTaGGAGCCAAGCCAACCTGCAGGTTCCTCACATGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTPVPSFSSTYV*EPSQPAGSSHG Trigger: CCCATGTGAGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAACTGGGGTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR TCA 90 bp | AAGCTGGAATCCCAGCTCCCTGGAACCAGCGGTTGCCCTTTAAACAGGGACTTCTCTTCTTGGTGGGGGTaGGATCTGCTGGCCTCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KLESQLPGTSGCPLNRDFSSWWG*DLLASS Trigger: AGAAGAGGCCAGCAGATCTCACCCCCACCAAGAAGA...GAAGTCCCTGTTTAAAGGGCAACCGCTGGTTCCAGGGAGCTGGGATTCCAGCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR TCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTCCAGCTGCAGTGGTGTaGGCCCATCGTTGTTGCGCA | + |
|
Preference number: 4 (lower is better) Translates to: RACNYYRSMLRPIPRKPLPAAVV*AHRCCA Trigger: TGCGCAACAACGATGGGCTCACACCACTGCAGCTGG...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR TCA 90 bp | CCATGCTGTACCATCCACCACCATCTCTCCCACCAGGCCATTCAGGATGGAATGTCTGACAGGATGGACTaGAGATCGGAGGGTCTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PCCTIHHHLSHQAIQDGMSDRMD*RSEGLS Trigger: GCTGAGACCCTCCGATCTTCAGTCCATCCTGTCAGA...CATTCCATCCTGAATGGCCTGGTGGGAGAGATGGTGGTGGATGGTACAGCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CCA 90 bp | CCATGCTGTACCATCCACCACCATCTCTCCCACCAGGCCATTCAGGATGGAATGGGGGGTGAGATCTGCTaGCCTCTTCTCTGTCAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: PCCTIHHHLSHQAIQDGMGGEIC*PLLCQY Trigger: GTACTGACAGAGAAGAGGCCAGCAGATCTCACCCCC...CATTCCATCCTGAATGGCCTGGTGGGAGAGATGGTGGTGGATGGTACAGCATGG 56% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CCA 90 bp | TTCCTTCCTTCTCCAGCACGTATGTCTTGGAGCCAAGCCAACCTGCAGGTTCCTGGCACTGCCGGATGTTaGAGTCCATCGGCTTGGAGA | + |
|
Preference number: 4 (lower is better) Translates to: FLPSPARMSWSQANLQVPGTAGC*SPSAWR Trigger: TCTCCAAGCCGATGGACTCCAACATCCGGCAGTGCC...AGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAA 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CCA 90 bp | ACCTTTCCCCCAGATCACAGCCTGTCTCCCTCAGGCTTTGTGTGTGTGTGTGTGTTGCGCTCGGACTGTTaGGATTGGATGGGGTCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: TFPPDHSLSPSGFVCVCVLRSDC*DWMGSL Trigger: CAGAGACCCCATCCAATCCCAACAGTCCGAGCGCAA...CACACACACACACACAAAGCCTGAGGGAGACAGGCTGTGATCTGGGGGAAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CCA 90 bp | ACCTTTCCCCCAGATCACAGCCTGTCTCCCTCAGGCTTTGTGTGTGTGTGTGTGCATCGTTGTTGCGCATaGTCTCCAGCTCCCAGTTGC | + |
|
Preference number: 4 (lower is better) Translates to: TFPPDHSLSPSGFVCVCVHRCCA*SPAPSC Trigger: GCAACTGGGAGCTGGAGACCATGCGCAACAACGATG...CACACACACACACACAAAGCCTGAGGGAGACAGGCTGTGATCTGGGGGAAAGGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CCA 90 bp | CCATGCTGTACCATCCACCACCATCTCTCCCACCAGGCCATTCAGGATGGAATGACTCCAAGATGGTCCTaGCTCTCTGCAAGCGCCAGA | + |
|
Preference number: 4 (lower is better) Translates to: PCCTIHHHLSHQAIQDGMTPRWS*LSASAR Trigger: TCTGGCGCTTGCAGAGAGCCAGGACCATCTTGGAGT...CATTCCATCCTGAATGGCCTGGTGGGAGAGATGGTGGTGGATGGTACAGCATGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR TCA 90 bp | TTCCTTCCTTCTCCAGCACGTATGTCTTGGAGCCAAGCCAACCTGCAGGTTCCTGCTGGTATTTGGGGTTaGAGAAGACCCCCTTGGCGT | + |
|
Preference number: 4 (lower is better) Translates to: FLPSPARMSWSQANLQVPAGIWG*RRPPWR Trigger: ACGCCAAGGGGGTCTTCTTCAACCCCAAATACCAGC...AGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR GCA 90 bp | AAGCTGGAATCCCAGCTCCCTGGAACCAGCGGTTGCCCTTTAAACAGGGACTTCCTCCAGGAAGAAGTGTaGACTCTTCTTGGTGGGGGT | + |
|
Preference number: 4 (lower is better) Translates to: KLESQLPGTSGCPLNRDFLQEEV*TLLGGG Trigger: ACCCCCACCAAGAAGAGTGCACACTTCTTCCTGGAG...GAAGTCCCTGTTTAAAGGGCAACCGCTGGTTCCAGGGAGCTGGGATTCCAGCTT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR GCA 90 bp | CATAGCACTTCAGCACACCAGGGCTCAGCCTGCAGCATCAAACCACAGGGTTCAGAGGCTGTCAGCTTGTaGATGAGGAAGTCAGGCACA | + |
|
Preference number: 4 (lower is better) Translates to: HSTSAHQGSACSIKPQGSEAVSL*MRKSGT Trigger: TGTGCCTGACTTCCTCATGCACAAGCTGACAGCCTC...TGAACCCTGTGGTTTGATGCTGCAGGCTGAGCCCTGGTGTGCTGAAGTGCTATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR GCA 90 bp | TTCCTTCCTTCTCCAGCACGTATGTCTTGGAGCCAAGCCAACCTGCAGGTTCCTTCAGGATCTCAGCCTTaGCCATCTTGGCAGCCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLPSPARMSWSQANLQVPSGSQP*PSWQPA Trigger: AGCTGGCTGCCAAGATGGGCAAGGCTGAGATCCTGA...AGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR GCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTTGCACAGCTCGCCCATaGGGAATCTGCTTCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: RACNYYRSMLRPIPRKPLCTARP*GICFSA Trigger: GGCTGAGAAGCAGATTCCGCATGGGCGAGCTGTGCA...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTGGCAGCCAGCTGCAGTaGTGTGAGCCCATCGTTGTT | + |
|
Preference number: 4 (lower is better) Translates to: RACNYYRSMLRPIPRKPLGSQLQ*CEPIVV Trigger: AACAACGATGGGCTCACACCACTGCAGCTGGCTGCC...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR TCA 90 bp | TTCCTTCCTTCTCCAGCACGTATGTCTTGGAGCCAAGCCAACCTGCAGGTTCCTTGCATGTGGCCCAGATaGGGACAAACATCCTCCCTA | + |
|
Preference number: 4 (lower is better) Translates to: FLPSPARMSWSQANLQVPCMWPR*GQTSSL Trigger: TAGGGAGGATGTTTGTCCTCATCTGGGCCACATGCA...AGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR TCA 90 bp | CATAGCACTTCAGCACACCAGGGCTCAGCCTGCAGCATCAAACCACAGGGTTCAGTGAAACCAGGCATCTaGCAGGATGGACTGAAGATC | + |
|
Preference number: 4 (lower is better) Translates to: HSTSAHQGSACSIKPQGSVKPGI*QDGLKI Trigger: GATCTTCAGTCCATCCTGTCAGATGCCTGGTTTCAC...TGAACCCTGTGGTTTGATGCTGCAGGCTGAGCCCTGGTGTGCTGAAGTGCTATG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR GCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTCTGGTTAGTACACGCTaGCAAAGCCAGGGGTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: RACNYYRSMLRPIPRKPLLVSTR*QSQGCL Trigger: GAGACACCCCTGGCTTTGGCAGCGTGTACTAACCAG...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR GCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTTCTCCAGCTCCCAGTTaGCACTCCTCAGCAGGATCA | + |
|
Preference number: 4 (lower is better) Translates to: RACNYYRSMLRPIPRKPLSPAPS*HSSAGS Trigger: TGATCCTGCTGAGGAGTGGCAACTGGGAGCTGGAGA...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR GCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTCCGGAAGTCCTCATCTaGTACTTTGCACAGCTCGCC | + |
|
Preference number: 4 (lower is better) Translates to: RACNYYRSMLRPIPRKPLPEVLI*YFAQLA Trigger: GGCGAGCTGTGCAAAGTAGCAGATGAGGACTTCCGG...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTTGGAGTCCATCGGCTTaGAGAAGATGGGTGGAGAGG | + |
|
Preference number: 4 (lower is better) Translates to: RACNYYRSMLRPIPRKPLWSPSA*RRWVER Trigger: CCTCTCCACCCATCTTCTCCAAGCCGATGGACTCCA...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CCA 90 bp | TTCCTTCCTTCTCCAGCACGTATGTCTTGGAGCCAAGCCAACCTGCAGGTTCCTAGGCATCTGACAGGATaGACTGAAGATCGGAGGGTC | + |
|
Preference number: 4 (lower is better) Translates to: FLPSPARMSWSQANLQVPRHLTG*TEDRRV Trigger: GACCCTCCGATCTTCAGTCCATCCTGTCAGATGCCT...AGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR TCA 90 bp | CTAGCAGTGTGTTTTAGGCATCTGCTGATTTCCCCAGTGGGAAACACTGGAGTGTCTGTCACATCATCCTaGGGAGACTGGGGAGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LAVCFRHLLISPVGNTGVSVTSS*GDWGES Trigger: GGACTCTCCCCAGTCTCCTCAGGATGATGTGACAGA...CACTCCAGTGTTTCCCACTGGGGAAATCAGCAGATGCCTAAAACACACTGCTAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR GCA 90 bp | CCATGCTGTACCATCCACCACCATCTCTCCCACCAGGCCATTCAGGATGGAATGGAAGTGATGTCTGTCTaGTCATTCTCCATCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: PCCTIHHHLSHQAIQDGMEVMSV*SFSISS Trigger: GCTGCTGATGGAGAATGAGCAGACAGACATCACTTC...CATTCCATCCTGAATGGCCTGGTGGGAGAGATGGTGGTGGATGGTACAGCATGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR GCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTCGCCCATGCGGAATCTaGTTCTCAGCCATTCTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: RACNYYRSMLRPIPRKPLRPCGI*FSAILV Trigger: TACCAGAATGGCTGAGAAGCAGATTCCGCATGGGCG...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CCA 90 bp | TTCCTTCCTTCTCCAGCACGTATGTCTTGGAGCCAAGCCAACCTGCAGGTTCCTTCGGACTGTTGGGATTaGATGGGGTCTCTGTCACAT | + |
|
Preference number: 4 (lower is better) Translates to: FLPSPARMSWSQANLQVPSDCWD*MGSLSH Trigger: ATGTGACAGAGACCCCATCCAATCCCAACAGTCCGA...AGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CCA 90 bp | TTCCTTCCTTCTCCAGCACGTATGTCTTGGAGCCAAGCCAACCTGCAGGTTCCTTCCGCTCACTTTCTTTaGAGACGTTCTCCACCGTCT | + |
|
Preference number: 4 (lower is better) Translates to: FLPSPARMSWSQANLQVPSAHFL*RRSPPS Trigger: AGACGGTGGAGAACGTCTCCAAAGAAAGTGAGCGGA...AGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR TCA 90 bp | CTAGCAGTGTGTTTTAGGCATCTGCTGATTTCCCCAGTGGGAAACACTGGAGTGCTGTCAGCTTGTGCATaGGGAAGTCAGGCACATCCA | + |
|
Preference number: 4 (lower is better) Translates to: LAVCFRHLLISPVGNTGVLSACA*GSQAHP Trigger: TGGATGTGCCTGACTTCCTCATGCACAAGCTGACAG...CACTCCAGTGTTTCCCACTGGGGAAATCAGCAGATGCCTAAAACACACTGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR TCA 90 bp | CATAGCACTTCAGCACACCAGGGCTCAGCCTGCAGCATCAAACCACAGGGTTCATTAACGAAGTCATTCTaGGTCTTGAAGTCCTCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: HSTSAHQGSACSIKPQGSLTKSF*VLKSSA Trigger: GGCTGAGGACTTCAAGACTCAGAATGACTTCGTTAA...TGAACCCTGTGGTTTGATGCTGCAGGCTGAGCCCTGGTGTGCTGAAGTGCTATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR GCA 90 bp | CTAGCAGTGTGTTTTAGGCATCTGCTGATTTCCCCAGTGGGAAACACTGGAGTGTTCCTTGGCCAGGTTTaGGCTCGGACTGTTGGGATT | + |
|
Preference number: 4 (lower is better) Translates to: LAVCFRHLLISPVGNTGVFLGQV*ARTVGI Trigger: AATCCCAACAGTCCGAGCGCAAACCTGGCCAAGGAA...CACTCCAGTGTTTCCCACTGGGGAAATCAGCAGATGCCTAAAACACACTGCTAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR GCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTAGTCGCTTCTTCTTCTaGCTCTGTTCTTCCTTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: RACNYYRSMLRPIPRKPLSRFFF*LCSSLA Trigger: GGCCAAGGAAGAACAGAGGCAGAAGAAGAAGCGACT...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CCA 90 bp | TTCCTTCCTTCTCCAGCACGTATGTCTTGGAGCCAAGCCAACCTGCAGGTTCCTACTGTTGGGATTGGATaGGGTCTCTGTCACATCATC | + |
|
Preference number: 4 (lower is better) Translates to: FLPSPARMSWSQANLQVPTVGIG*GLCHII Trigger: GATGATGTGACAGAGACCCCATCCAATCCCAACAGT...AGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCCTTCTCCAGCACGTATGTCTTGGAGCCAAGCCAACCTGCAGGTTCCTTGCACAATCTCAGGCTaGTTAGTACACGCTGCCAAA | + |
|
Preference number: 4 (lower is better) Translates to: FLPSPARMSWSQANLQVPCTISG*LVHAAK Trigger: TTTGGCAGCGTGTACTAACCAGCCTGAGATTGTGCA...AGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| 3UTR CAA 72 bp | TGCAAAGCTGGAATCCCAGCTCCCTGGAACCAGCGGTaGCCCTTTAAACAGGGACTTCTGTTCAGGATAACT | + |
|
Preference number: 4 (lower is better) Translates to: CKAGIPAPWNQR*PFKQGLLFRIT Trigger: AGTTATCCTGAACAGAAGTCCCTGTTTAAAGGGCAACCGCTGGTTCCAGGGAGCTGGGATTCCAGCTTTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR TCA 90 bp | CTAGCAGTGTGTTTTAGGCATCTGCTGATTTCCCCAGTGGGAAACACTGGAGTGGGGAATCCTGGGAAGTaGTGTCTGTCTGCTCATTCT | + |
|
Preference number: 4 (lower is better) Translates to: LAVCFRHLLISPVGNTGVGNPGK*CLSAHS Trigger: AGAATGAGCAGACAGACATCACTTCCCAGGATTCCC...CACTCCAGTGTTTCCCACTGGGGAAATCAGCAGATGCCTAAAACACACTGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR TCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTATCCTCCCTAGGAGCTaGAGCCAACTCATTTTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: RACNYYRSMLRPIPRKPLILPRS*SQLILC Trigger: ACACAAAATGAGTTGGCTTCAGCTCCTAGGGAGGAT...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR GCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTTTCTCCATCAGCAGCTaGACAATCTCAGGCTGGTTA | + |
|
Preference number: 4 (lower is better) Translates to: RACNYYRSMLRPIPRKPLFSISS*TISGWL Trigger: TAACCAGCCTGAGATTGTGCAGCTGCTGATGGAGAA...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCCTTCTCCAGCACGTATGTCTTGGAGCCAAGCCAACCTGCAGGTTCCTGTCTCAGCAGGAAAATaGCAATGCCTTCTTTCACAG | + |
|
Preference number: 4 (lower is better) Translates to: FLPSPARMSWSQANLQVPVSAGK*QCLLSQ Trigger: CTGTGAAAGAAGGCATTGCCATTTTCCTGCTGAGAC...AGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR CCA 90 bp | ACCTTTCCCCCAGATCACAGCCTGTCTCCCTCAGGCTTTGTGTGTGTGTGTGTGAGTCCTTTTTGTCCTTaGAGCACTTCTCAATCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: TFPPDHSLSPSGFVCVCVSPFCP*STSQSV Trigger: CACTGATTGAGAAGTGCTCCAAGGACAAAAAGGACT...CACACACACACACACAAAGCCTGAGGGAGACAGGCTGTGATCTGGGGGAAAGGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR CCA 90 bp | CTAGCAGTGTGTTTTAGGCATCTGCTGATTTCCCCAGTGGGAAACACTGGAGTGTCTCAAACTCCAAGATaGTCCTGGCTCTCTGCAAGC | + |
|
Preference number: 4 (lower is better) Translates to: LAVCFRHLLISPVGNTGVSQTPR*SWLSAS Trigger: GCTTGCAGAGAGCCAGGACCATCTTGGAGTTTGAGA...CACTCCAGTGTTTCCCACTGGGGAAATCAGCAGATGCCTAAAACACACTGCTAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR GCA 90 bp | CTAGTCATTGGAGAAATTCTCCAATCTCCACCTCTACTCTACCAAACTGACTCTGGTGGGGGTGAGATCTaGTGGCCTCTTCTCTGTCAG | + |
|
Preference number: 4 (lower is better) Translates to: LVIGEILQSPPLLYQTDSGGGEI*WPLLCQ Trigger: CTGACAGAGAAGAGGCCAGCAGATCTCACCCCCACC...AGAGTCAGTTTGGTAGAGTAGAGGTGGAGATTGGAGAATTTCTCCAATGACTAG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR GCA 90 bp | CTAGTCATTGGAGAAATTCTCCAATCTCCACCTCTACTCTACCAAACTGACTCTGTGTGTAGCAGCGTATaGAGAGGCTCCAGGGTCAGC | + |
|
Preference number: 4 (lower is better) Translates to: LVIGEILQSPPLLYQTDSVCSSV*RGSRVS Trigger: GCTGACCCTGGAGCCTCTGCATACGCTGCTACACAC...AGAGTCAGTTTGGTAGAGTAGAGGTGGAGATTGGAGAATTTCTCCAATGACTAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR GCA 90 bp | CATAGCACTTCAGCACACCAGGGCTCAGCCTGCAGCATCAAACCACAGGGTTCAAACTTGAGGACATCATaGAAAATGACCTTCTGGATC | + |
|
Preference number: 4 (lower is better) Translates to: HSTSAHQGSACSIKPQGSNLRTS*KMTFWI Trigger: GATCCAGAAGGTCATTTTGCATGATGTCCTCAAGTT...TGAACCCTGTGGTTTGATGCTGCAGGCTGAGCCCTGGTGTGCTGAAGTGCTATG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR GCA 90 bp | TTCCTTCCTTCTCCAGCACGTATGTCTTGGAGCCAAGCCAACCTGCAGGTTCCTGGGTGGTTTTGCTATTaGTCCTGGAAGAATCTTGAA | + |
|
Preference number: 4 (lower is better) Translates to: FLPSPARMSWSQANLQVPGWFCY*SWKNLE Trigger: TTCAAGATTCTTCCAGGAGCAATAGCAAAACCACCC...AGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR CCA 90 bp | TTCCTTCCTTCTCCAGCACGTATGTCTTGGAGCCAAGCCAACCTGCAGGTTCCTTGCAAAATGACCTTCTaGATCATGACGCTGTACATG | + |
|
Preference number: 4 (lower is better) Translates to: FLPSPARMSWSQANLQVPCKMTF*IMTLYM Trigger: CATGTACAGCGTCATGATCCAGAAGGTCATTTTGCA...AGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR TCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTTGGTGTTGTAGACGATaGTTTCCAGCACAGAGTTAT | + |
|
Preference number: 4 (lower is better) Translates to: RACNYYRSMLRPIPRKPLWCCRR*FPAQSY Trigger: ATAACTCTGTGCTGGAAATCATCGTCTACAACACCA...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR TCA 90 bp | CCATGCTGTACCATCCACCACCATCTCTCCCACCAGGCCATTCAGGATGGAATGCTCCTGGAAGAATCTTaGATCTTGTTTAAATCTGCT | + |
|
Preference number: 4 (lower is better) Translates to: PCCTIHHHLSHQAIQDGMLLEES*ILFKSA Trigger: AGCAGATTTAAACAAGATTCAAGATTCTTCCAGGAG...CATTCCATCCTGAATGGCCTGGTGGGAGAGATGGTGGTGGATGGTACAGCATGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR GCA 90 bp | CTAGTCATTGGAGAAATTCTCCAATCTCCACCTCTACTCTACCAAACTGACTCTCCATGTCATCACAGTTaGCAGAGAGGCACTGCCGGA | + |
|
Preference number: 4 (lower is better) Translates to: LVIGEILQSPPLLYQTDSPCHHS*QRGTAG Trigger: TCCGGCAGTGCCTCTCTGGCAACTGTGATGACATGG...AGAGTCAGTTTGGTAGAGTAGAGGTGGAGATTGGAGAATTTCTCCAATGACTAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR GCA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTCATAGAGGGTGGTTTTaGTATTGCTCCTGGAAGAAT | + |
|
Preference number: 4 (lower is better) Translates to: RACNYYRSMLRPIPRKPLHRGWF*YCSWKN Trigger: ATTCTTCCAGGAGCAATAGCAAAACCACCCTCTATG...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR CCA 90 bp | AAGCTGGAATCCCAGCTCCCTGGAACCAGCGGTTGCCCTTTAAACAGGGACTTCTTTTGCTATTGCTCCTaGAAGAATCTTGAATCTTGT | + |
|
Preference number: 4 (lower is better) Translates to: KLESQLPGTSGCPLNRDFFCYCS*KNLESC Trigger: ACAAGATTCAAGATTCTTCCAGGAGCAATAGCAAAA...GAAGTCCCTGTTTAAAGGGCAACCGCTGGTTCCAGGGAGCTGGGATTCCAGCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| 3UTR CAA 72 bp | ATGACCAACTTTTCACCTGTCCAGCTATGCTGGTACTaGGAACTTTCTAGAATGGAGAAACCTGCCAGAGTG | + |
|
Preference number: 4 (lower is better) Translates to: MTNFSPVQLCWY*ELSRMEKPARV Trigger: CACTCTGGCAGGTTTCTCCATTCTAGAAAGTTCCAAGTACCAGCATAGCTGGACAGGTGAAAAGTTGGTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| 3UTR CAA 72 bp | GATAGGCCAACAAGAGTCAGTGGTGTGTGTGTATTCTaGCTATCTTTGTTGTTATTGTGTGGCTTTAGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: DRPTRVSGVCVF*LSLLLLCGFRH Trigger: GTGCCTAAAGCCACACAATAACAACAAAGATAGCAAGAATACACACACACCACTGACTCTTGTTGGCCTATC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR TCA 90 bp | CTAGTCATTGGAGAAATTCTCCAATCTCCACCTCTACTCTACCAAACTGACTCTAGACAAGGGTCAGGGTaGTGTTGTAGAAGAAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: LVIGEILQSPPLLYQTDSRQGSG*CCRRNR Trigger: TCTATTTCTTCTACAACATCACCCTGACCCTTGTCT...AGAGTCAGTTTGGTAGAGTAGAGGTGGAGATTGGAGAATTTCTCCAATGACTAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| 3UTR CAA 72 bp | TCTTCAACATCTTCCCAACAAGTACTAGCCCATTTCTaGAACTCTTCTAAACTCCTGAAGCAGCTGTCTACT | + |
|
Preference number: 4 (lower is better) Translates to: SSTSSQQVLAHF*NSSKLLKQLST Trigger: AGTAGACAGCTGCTTCAGGAGTTTAGAAGAGTTCAAGAAATGGGCTAGTACTTGTTGGGAAGATGTTGAAGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| 3UTR CAA 72 bp | TATTTAAGCATCTCTCAGTTGGAGATAGGTTTAGCCTaGGATTTCAATCCAAGGATAGAGTCCAGTTTCCTG | + |
|
Preference number: 4 (lower is better) Translates to: YLSISQLEIGLA*DFNPRIESSFL Trigger: CAGGAAACTGGACTCTATCCTTGGATTGAAATCCAAGGCTAAACCTATCTCCAACTGAGAGATGCTTAAATA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| 3UTR CAA 72 bp | ACAAGAGTCAGTGGTGTGTGTGTATTCTTGCTATCTTaGTTGTTATTGTGTGGCTTTAGGCACATTGGATCT | + |
|
Preference number: 4 (lower is better) Translates to: TRVSGVCVFLLS*LLLCGFRHIGS Trigger: AGATCCAATGTGCCTAAAGCCACACAATAACAACAAAGATAGCAAGAATACACACACACCACTGACTCTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| 3UTR CAA 72 bp | ACTTTGTGTCAGTTACACTATTTAAGCATCTCTCAGTaGGAGATAGGTTTAGCCTTGGATTTCAATCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: TLCQLHYLSISQ*EIGLALDFNPR Trigger: CCTTGGATTGAAATCCAAGGCTAAACCTATCTCCAACTGAGAGATGCTTAAATAGTGTAACTGACACAAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| 3UTR CAA 72 bp | AGTGGTGTGTGTGTATTCTTGCTATCTTTGTTGTTATaGTGTGGCTTTAGGCACATTGGATCTTTAGACTTG | + |
|
Preference number: 4 (lower is better) Translates to: SGVCVFLLSLLL*CGFRHIGSLDL Trigger: CAAGTCTAAAGATCCAATGTGCCTAAAGCCACACAATAACAACAAAGATAGCAAGAATACACACACACCACT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 90 bp | AGGAAGTCAGGCACATCCAGGCCGCGGCGCCTCCTGCAGAGGTCCTaGAGATCCTGTAGGAGTTCCCGCAGCTCCTCCACGCAGCCCTCG | + |
|
Preference number: 5 (lower is better) Translates to: RKSGTSRPRRLLQRS*RSCRSSRSSSTQPS Trigger: CGAGGGCTGCGTGGAGGAGCTGCGGGAACTCCTACAGGATCTGCAGGACCTCTGCAGGAGGCGCCGCGGCCTGGATGTGCCTGACTTCCT 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS GCA 90 bp | GCCTTCATCAGGCAGGTCTTCCCGGTGTCTGAGGCTGTCAGCTTGTaGATGAGGAAGTCAGGCACATCCAGGCCGCGGCGCCTCCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: AFIRQVFPVSEAVSL*MRKSGTSRPRRLLQ Trigger: CTGCAGGAGGCGCCGCGGCCTGGATGTGCCTGACTTCCTCATGCACAAGCTGACAGCCTCAGACACCGGGAAGACCTGCCTGATGAAGGC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS TCA 90 bp | TCATCAGGCAGGTCTTCCCGGTGTCTGAGGCTGTCAGCTTGTGCATaGGGAAGTCAGGCACATCCAGGCCGCGGCGCCTCCTGCAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: SSGRSSRCLRLSACA*GSQAHPGRGASCRG Trigger: ACCTCTGCAGGAGGCGCCGCGGCCTGGATGTGCCTGACTTCCTCATGCACAAGCTGACAGCCTCAGACACCGGGAAGACCTGCCTGATGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS GCA 90 bp | CCCCTTGGCGTGAGCATTGACGTCAGCACCCGCTGCTATAAGCACTaGTGTGATGTCTCCCTGGCGCCGCTCGATGGCGATGTTCAGCGC | + |
|
Preference number: 5 (lower is better) Translates to: PLGVSIDVSTRCYKH*CDVSLAPLDGDVQR Trigger: GCGCTGAACATCGCCATCGAGCGGCGCCAGGGAGACATCACAGCAGTGCTTATAGCAGCGGGTGCTGACGTCAATGCTCACGCCAAGGGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 90 bp | GTTCCCGCAGCTCCTCCACGCAGCCCTCGGACACAGCCGCGAAGATaGGCTTCTTCAGTCGCTTCTTCTTCTGCCTCTGTTCTTCCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: VPAAPPRSPRTQPRR*ASSVASSSASVLPW Trigger: CCAAGGAAGAACAGAGGCAGAAGAAGAAGCGACTGAAGAAGCGCATCTTCGCGGCTGTGTCCGAGGGCTGCGTGGAGGAGCTGCGGGAAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 90 bp | GTTGAAGAAGACCCCCTTGGCGTGAGCATTGACGTCAGCACCCGCTaGTATAAGCACTGCTGTGATGTCTCCCTGGCGCCGCTCGATGGC | + |
|
Preference number: 5 (lower is better) Translates to: VEEDPLGVSIDVSTR*YKHCCDVSLAPLDG Trigger: GCCATCGAGCGGCGCCAGGGAGACATCACAGCAGTGCTTATAGCAGCGGGTGCTGACGTCAATGCTCACGCCAAGGGGGTCTTCTTCAAC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CAA 90 bp | TTCCTTCCTTCTCCAGCACGTATGTCTTGGAGCCAAGCCAACCTGCAGGTTCCTATGGGTGGAGAGGTCTaGGTGACCGTGGGGTTGGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLPSPARMSWSQANLQVPMGGEV*VTVGLG Trigger: GCCCAACCCCACGGTCACCAAGACCTCTCCACCCAT...AGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CAA 90 bp | CATAGCACTTCAGCACACCAGGGCTCAGCCTGCAGCATCAAACCACAGGGTTCAGTCTCCAGCTCCCAGTaGCCACTCCTCAGCAGGATC | + |
|
Preference number: 5 (lower is better) Translates to: HSTSAHQGSACSIKPQGSVSSSQ*PLLSRI Trigger: GATCCTGCTGAGGAGTGGCAACTGGGAGCTGGAGAC...TGAACCCTGTGGTTTGATGCTGCAGGCTGAGCCCTGGTGTGCTGAAGTGCTATG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CAA 90 bp | AAGCTGGAATCCCAGCTCCCTGGAACCAGCGGTTGCCCTTTAAACAGGGACTTCAGGCCTATGGTGAGCTaGAAGAGCTCCAGCACCGCG | + |
|
Preference number: 5 (lower is better) Translates to: KLESQLPGTSGCPLNRDFRPMVS*KSSSTA Trigger: CGCGGTGCTGGAGCTCTTCAAGCTCACCATAGGCCT...GAAGTCCCTGTTTAAAGGGCAACCGCTGGTTCCAGGGAGCTGGGATTCCAGCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 90 bp | TCGGACACAGCCGCGAAGATGCGCTTCTTCAGTCGCTTCTTCTTCTaGCTCTGTTCTTCCTTGGCCAGGTTTGCGCTCGGACTGTTGGGA | + |
|
Preference number: 5 (lower is better) Translates to: SDTAAKMRFFSRFFF*LCSSLARFALGLLG Trigger: TCCCAACAGTCCGAGCGCAAACCTGGCCAAGGAAGAACAGAGGCAGAAGAAGAAGCGACTGAAGAAGCGCATCTTCGCGGCTGTGTCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 90 bp | CCACTTCACCTCGTTGATCCGCAGACACAGCCGGAAGTCCTCATCTaGTACTTTGCACAGCTCGCCCATGCGGAATCTGCTTCTCAGCCA | + |
|
Preference number: 5 (lower is better) Translates to: PLHLVDPQTQPEVLI*YFAQLAHAESASQP Trigger: TGGCTGAGAAGCAGATTCCGCATGGGCGAGCTGTGCAAAGTAGCAGATGAGGACTTCCGGCTGTGTCTGCGGATCAACGAGGTGAAGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 90 bp | GCCTCTGTTCTTCCTTGGCCAGGTTTGCGCTCGGACTGTTGGGATTaGATGGGGTCTCTGTCACATCATCCTGAGGAGACTGGGGAGAGT | + |
|
Preference number: 5 (lower is better) Translates to: ASVLPWPGLRSDCWD*MGSLSHHPEETGES Trigger: ACTCTCCCCAGTCTCCTCAGGATGATGTGACAGAGACCCCATCCAATCCCAACAGTCCGAGCGCAAACCTGGCCAAGGAAGAACAGAGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS CCA 90 bp | GCCACTGTCACCAGCGCGTGCAGGATGTTGTTTCCCCGGGAATCCTaGGAAGTGATGTCTGTCTGCTCATTCTCCATCAGCAGCTGCACA | + |
|
Preference number: 5 (lower is better) Translates to: ATVTSACRMLFPRES*EVMSVCSFSISSCT Trigger: TGTGCAGCTGCTGATGGAGAATGAGCAGACAGACATCACTTCCCAGGATTCCCGGGGAAACAACATCCTGCACGCGCTGGTGACAGTGGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CAA 90 bp | CATAGCACTTCAGCACACCAGGGCTCAGCCTGCAGCATCAAACCACAGGGTTCATCCATGTCATCACAGTaGCCAGAGAGGCACTGCCGG | + |
|
Preference number: 5 (lower is better) Translates to: HSTSAHQGSACSIKPQGSSMSSQ*PERHCR Trigger: CCGGCAGTGCCTCTCTGGCAACTGTGATGACATGGA...TGAACCCTGTGGTTTGATGCTGCAGGCTGAGCCCTGGTGTGCTGAAGTGCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR CAA 90 bp | CATAGCACTTCAGCACACCAGGGCTCAGCCTGCAGCATCAAACCACAGGGTTCATGCCTCTGTTCTTCCTaGGCCAGGTTTGCGCTCGGA | + |
|
Preference number: 5 (lower is better) Translates to: HSTSAHQGSACSIKPQGSCLCSS*ARFALG Trigger: TCCGAGCGCAAACCTGGCCAAGGAAGAACAGAGGCA...TGAACCCTGTGGTTTGATGCTGCAGGCTGAGCCCTGGTGTGCTGAAGTGCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CAA 90 bp | ACCTTTCCCCCAGATCACAGCCTGTCTCCCTCAGGCTTTGTGTGTGTGTGTGTGTTCAGGATCTCAGCCTaGCCCATCTTGGCAGCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: TFPPDHSLSPSGFVCVCVFRISA*PILAAS Trigger: GCTGGCTGCCAAGATGGGCAAGGCTGAGATCCTGAA...CACACACACACACACAAAGCCTGAGGGAGACAGGCTGTGATCTGGGGGAAAGGT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CAA 90 bp | CATAGCACTTCAGCACACCAGGGCTCAGCCTGCAGCATCAAACCACAGGGTTCATCCTCATCTGCTACTTaGCACAGCTCGCCCATGCGG | + |
|
Preference number: 5 (lower is better) Translates to: HSTSAHQGSACSIKPQGSSSSAT*HSSPMR Trigger: CCGCATGGGCGAGCTGTGCAAAGTAGCAGATGAGGA...TGAACCCTGTGGTTTGATGCTGCAGGCTGAGCCCTGGTGTGCTGAAGTGCTATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 90 bp | TATCTCCAGGAAGAAGTGTGCACTCTTCTTGGTGGGGGTGAGATCTaGTGGCCTCTTCTCTGTCAGTACAACAGGGTTCCCGCCAGGTGC | + |
|
Preference number: 5 (lower is better) Translates to: YLQEEVCTLLGGGEI*WPLLCQYNRVPARC Trigger: GCACCTGGCGGGAACCCTGTTGTACTGACAGAGAAGAGGCCAGCAGATCTCACCCCCACCAAGAAGAGTGCACACTTCTTCCTGGAGATA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 90 bp | CTGTTCTTCCTTGGCCAGGTTTGCGCTCGGACTGTTGGGATTGGATaGGGTCTCTGTCACATCATCCTGAGGAGACTGGGGAGAGTCCAT | + |
|
Preference number: 5 (lower is better) Translates to: LFFLGQVCARTVGIG*GLCHIILRRLGRVH Trigger: ATGGACTCTCCCCAGTCTCCTCAGGATGATGTGACAGAGACCCCATCCAATCCCAACAGTCCGAGCGCAAACCTGGCCAAGGAAGAACAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS CCA 90 bp | TCTTCTGCCTCTGTTCTTCCTTGGCCAGGTTTGCGCTCGGACTGTTaGGATTGGATGGGGTCTCTGTCACATCATCCTGAGGAGACTGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSASVLPWPGLRSDC*DWMGSLSHHPEETG Trigger: CCCAGTCTCCTCAGGATGATGTGACAGAGACCCCATCCAATCCCAACAGTCCGAGCGCAAACCTGGCCAAGGAAGAACAGAGGCAGAAGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR CAA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTAGGCACTGCCGGATGTaGGAGTCCATCGGCTTGGAG | + |
|
Preference number: 5 (lower is better) Translates to: RACNYYRSMLRPIPRKPLRHCRM*ESIGLE Trigger: CTCCAAGCCGATGGACTCCAACATCCGGCAGTGCCT...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR CAA 90 bp | CATAGCACTTCAGCACACCAGGGCTCAGCCTGCAGCATCAAACCACAGGGTTCATGCTGGTATTTGGGGTaGAAGAAGACCCCCTTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: HSTSAHQGSACSIKPQGSCWYLG*KKTPLA Trigger: CGCCAAGGGGGTCTTCTTCAACCCCAAATACCAGCA...TGAACCCTGTGGTTTGATGCTGCAGGCTGAGCCCTGGTGTGCTGAAGTGCTATG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR CAA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTGGTGTGAGCCCATCGTaGTTGCGCATGGTCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: RACNYYRSMLRPIPRKPLGVSPS*LRMVSS Trigger: GCTGGAGACCATGCGCAACAACGATGGGCTCACACC...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS TCA 90 bp | TCACCAGCGCGTGCAGGATGTTGTTTCCCCGGGAATCCTGGGAAGTaGTGTCTGTCTGCTCATTCTCCATCAGCAGCTGCACAATCTCAG | + |
|
Preference number: 5 (lower is better) Translates to: SPARAGCCFPGNPGK*CLSAHSPSAAAQSQ Trigger: CTGAGATTGTGCAGCTGCTGATGGAGAATGAGCAGACAGACATCACTTCCCAGGATTCCCGGGGAAACAACATCCTGCACGCGCTGGTGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS TCA 90 bp | GAGATGCATGTGGCCCAGATGAGGACAAACATCCTCCCTAGGAGCTaGAGCCAACTCATTTTGTGTGTCAGGGCCAAGGGGTGTGGGAGA | + |
|
Preference number: 5 (lower is better) Translates to: EMHVAQMRTNILPRS*SQLILCVRAKGCGR Trigger: TCTCCCACACCCCTTGGCCCTGACACACAAAATGAGTTGGCTTCAGCTCCTAGGGAGGATGTTTGTCCTCATCTGGGCCACATGCATCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR CAA 90 bp | TTCCTTCCTTCTCCAGCACGTATGTCTTGGAGCCAAGCCAACCTGCAGGTTCCTTCTGAGGCTGTCAGCTaGTGCATGAGGAAGTCAGGC | + |
|
Preference number: 5 (lower is better) Translates to: FLPSPARMSWSQANLQVPSEAVS*CMRKSG Trigger: GCCTGACTTCCTCATGCACAAGCTGACAGCCTCAGA...AGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAA 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
||
| CDS-3UTR CAA 90 bp | CCATGCTGTACCATCCACCACCATCTCTCCCACCAGGCCATTCAGGATGGAATGCCTTCATGCTGGTATTaGGGGTTGAAGAAGACCCCC | + |
|
Preference number: 5 (lower is better) Translates to: PCCTIHHHLSHQAIQDGMPSCWY*GLKKTP Trigger: GGGGGTCTTCTTCAACCCCAAATACCAGCATGAAGG...CATTCCATCCTGAATGGCCTGGTGGGAGAGATGGTGGTGGATGGTACAGCATGG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CAA 90 bp | CTAGCAGTGTGTTTTAGGCATCTGCTGATTTCCCCAGTGGGAAACACTGGAGTGGTGAGCCCATCGTTGTaGCGCATGGTCTCCAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LAVCFRHLLISPVGNTGVVSPSL*RMVSSS Trigger: GGAGCTGGAGACCATGCGCAACAACGATGGGCTCAC...CACTCCAGTGTTTCCCACTGGGGAAATCAGCAGATGCCTAAAACACACTGCTAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS TCA 90 bp | AAGCCTTCATGCTGGTATTTGGGGTTGAAGAAGACCCCCTTGGCGTaGGCATTGACGTCAGCACCCGCTGCTATAAGCACTGCTGTGATG | + |
|
Preference number: 5 (lower is better) Translates to: KPSCWYLGLKKTPLA*ALTSAPAAISTAVM Trigger: CATCACAGCAGTGCTTATAGCAGCGGGTGCTGACGTCAATGCTCACGCCAAGGGGGTCTTCTTCAACCCCAAATACCAGCATGAAGGCTT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 90 bp | GAATCCTGGGAAGTGATGTCTGTCTGCTCATTCTCCATCAGCAGCTaGACAATCTCAGGCTGGTTAGTACACGCTGCCAAAGCCAGGGGT | + |
|
Preference number: 5 (lower is better) Translates to: ESWEVMSVCSFSISS*TISGWLVHAAKARG Trigger: ACCCCTGGCTTTGGCAGCGTGTACTAACCAGCCTGAGATTGTGCAGCTGCTGATGGAGAATGAGCAGACAGACATCACTTCCCAGGATTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CAA 90 bp | AGGGCTTGTAACTACTACCGAAGCATGCTCAGGCCCATCCCCAGAAAACCTCTTCTCGGACTGTTGGGATaGGATGGGGTCTCTGTCACA | + |
|
Preference number: 5 (lower is better) Translates to: RACNYYRSMLRPIPRKPLLGLLG*DGVSVT Trigger: TGTGACAGAGACCCCATCCAATCCCAACAGTCCGAG...AAGAGGTTTTCTGGGGATGGGCCTGAGCATGCTTCGGTAGTAGTTACAAGCCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS TCA 90 bp | CTCCTCAGCAGGATCATGTCATACATGCGCTTAACGAAGTCATTCTaGGTCTTGAAGTCCTCAGCCACTGTCACCAGCGCGTGCAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: LLSRIMSYMRLTKSF*VLKSSATVTSACRM Trigger: CATCCTGCACGCGCTGGTGACAGTGGCTGAGGACTTCAAGACTCAGAATGACTTCGTTAAGCGCATGTATGACATGATCCTGCTGAGGAG 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 90 bp | ATTCTCCATCAGCAGCTGCACAATCTCAGGCTGGTTAGTACACGCTaGCAAAGCCAGGGGTGTCTCGCCAAAATAGAAGCCTTCATGCTG | + |
|
Preference number: 5 (lower is better) Translates to: ILHQQLHNLRLVSTR*QSQGCLAKIEAFML Trigger: CAGCATGAAGGCTTCTATTTTGGCGAGACACCCCTGGCTTTGGCAGCGTGTACTAACCAGCCTGAGATTGTGCAGCTGCTGATGGAGAAT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CAA 90 bp | CATAGCACTTCAGCACACCAGGGCTCAGCCTGCAGCATCAAACCACAGGGTTCAGAACTGCAGTCCTTTTaGTCCTTGGAGCACTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: HSTSAHQGSACSIKPQGSELQSF*SLEHFS Trigger: TGAGAAGTGCTCCAAGGACAAAAAGGACTGCAGTTC...TGAACCCTGTGGTTTGATGCTGCAGGCTGAGCCCTGGTGTGCTGAAGTGCTATG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 90 bp | TGCAGGATGTTGTTTCCCCGGGAATCCTGGGAAGTGATGTCTGTCTaGTCATTCTCCATCAGCAGCTGCACAATCTCAGGCTGGTTAGTA | + |
|
Preference number: 5 (lower is better) Translates to: CRMLFPRESWEVMSV*SFSISSCTISGWLV Trigger: TACTAACCAGCCTGAGATTGTGCAGCTGCTGATGGAGAATGAGCAGACAGACATCACTTCCCAGGATTCCCGGGGAAACAACATCCTGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CAA 90 bp | TTCCTTCCTTCTCCAGCACGTATGTCTTGGAGCCAAGCCAACCTGCAGGTTCCTGTGTTGGGATTGATGTaGAGCAAAGCCTTCATCAGG | + |
|
Preference number: 5 (lower is better) Translates to: FLPSPARMSWSQANLQVPVLGLM*SKAFIR Trigger: CCTGATGAAGGCTTTGCTCAACATCAATCCCAACAC...AGGAACCTGCAGGTTGGCTTGGCTCCAAGACATACGTGCTGGAGAAGGAAGGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 90 bp | GACACAGCCGGAAGTCCTCATCTGCTACTTTGCACAGCTCGCCCATaGGGAATCTGCTTCTCAGCCATTCTGGTAACATTTTCTCAAACT | + |
|
Preference number: 5 (lower is better) Translates to: DTAGSPHLLLCTARP*GICFSAILVTFSQT Trigger: AGTTTGAGAAAATGTTACCAGAATGGCTGAGAAGCAGATTCCGCATGGGCGAGCTGTGCAAAGTAGCAGATGAGGACTTCCGGCTGTGTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 90 bp | GGAAGTCCTCATCTGCTACTTTGCACAGCTCGCCCATGCGGAATCTaGTTCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGG | + |
|
Preference number: 5 (lower is better) Translates to: GSPHLLLCTARPCGI*FSAILVTFSQTPRW Trigger: CCATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGAAGCAGATTCCGCATGGGCGAGCTGTGCAAAGTAGCAGATGAGGACTTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 90 bp | TTCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATGGTCCTaGCTCTCTGCAAGCGCCAGATCCGCTCACTTTCTTTGGAGACGT | + |
|
Preference number: 5 (lower is better) Translates to: FSAILVTFSQTPRWS*LSASARSAHFLWRR Trigger: ACGTCTCCAAAGAAAGTGAGCGGATCTGGCGCTTGCAGAGAGCCAGGACCATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 90 bp | ATCTGCTTCTCAGCCATTCTGGTAACATTTTCTCAAACTCCAAGATaGTCCTGGCTCTCTGCAAGCGCCAGATCCGCTCACTTTCTTTGG | + |
|
Preference number: 5 (lower is better) Translates to: ICFSAILVTFSQTPR*SWLSASARSAHFLW Trigger: CCAAAGAAAGTGAGCGGATCTGGCGCTTGCAGAGAGCCAGGACCATCTTGGAGTTTGAGAAAATGTTACCAGAATGGCTGAGAAGCAGAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CAA 90 bp | CTAGTCATTGGAGAAATTCTCCAATCTCCACCTCTACTCTACCAAACTGACTCTTTTGCGCTCGGACTGTaGGGATTGGATGGGGTCTCT | + |
|
Preference number: 5 (lower is better) Translates to: LVIGEILQSPPLLYQTDSFALGL*GLDGVS Trigger: AGAGACCCCATCCAATCCCAACAGTCCGAGCGCAAA...AGAGTCAGTTTGGTAGAGTAGAGGTGGAGATTGGAGAATTTCTCCAATGACTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CAA 90 bp | CTAGCAGTGTGTTTTAGGCATCTGCTGATTTCCCCAGTGGGAAACACTGGAGTGTCTTTGGTGTTGGGATaGATGTTGAGCAAAGCCTTC | + |
|
Preference number: 5 (lower is better) Translates to: LAVCFRHLLISPVGNTGVSLVLG*MLSKAF Trigger: GAAGGCTTTGCTCAACATCAATCCCAACACCAAAGA...CACTCCAGTGTTTCCCACTGGGGAAATCAGCAGATGCCTAAAACACACTGCTAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS-3UTR CAA 90 bp | CTAGCAGTGTGTTTTAGGCATCTGCTGATTTCCCCAGTGGGAAACACTGGAGTGACGATCTCTTTGGTGTaGGGATTGATGTTGAGCAAA | + |
|
Preference number: 5 (lower is better) Translates to: LAVCFRHLLISPVGNTGVTISLV*GLMLSK Trigger: TTTGCTCAACATCAATCCCAACACCAAAGAGATCGT...CACTCCAGTGTTTCCCACTGGGGAAATCAGCAGATGCCTAAAACACACTGCTAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 90 bp | AACATGTACTTGGCAAATTTCTTCCATTTCGTGTGTAGCAGCGTATaGAGAGGCTCCAGGGTCAGCATCTCATGTCGGTTATCAATGTTG | + |
|
Preference number: 5 (lower is better) Translates to: NMYLANFFHFVCSSV*RGSRVSISCRLSML Trigger: CAACATTGATAACCGACATGAGATGCTGACCCTGGAGCCTCTGCATACGCTGCTACACACGAAATGGAAGAAATTTGCCAAGTACATGTT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 90 bp | GGAATTCATCTAATTCATCAAACGCATAGAGGGTGGTTTTGCTATTaGTCCTGGAAGAATCTTGAATCTTGTTTAAATCTGCTGTCCGTC | + |
|
Preference number: 5 (lower is better) Translates to: GIHLIHQTHRGWFCY*SWKNLESCLNLLSV Trigger: GACGGACAGCAGATTTAAACAAGATTCAAGATTCTTCCAGGAGCAATAGCAAAACCACCCTCTATGCGTTTGATGAATTAGATGAATTCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 90 bp | CATCTAATTCATCAAACGCATAGAGGGTGGTTTTGCTATTGCTCCTaGAAGAATCTTGAATCTTGTTTAAATCTGCTGTCCGTCTTATGG | + |
|
Preference number: 5 (lower is better) Translates to: HLIHQTHRGWFCYCS*KNLESCLNLLSVLW Trigger: CCATAAGACGGACAGCAGATTTAAACAAGATTCAAGATTCTTCCAGGAGCAATAGCAAAACCACCCTCTATGCGTTTGATGAATTAGATG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 90 bp | CCGACGTTTCTGGGAATTCATCTAATTCATCAAACGCATAGAGGGTaGTTTTGCTATTGCTCCTGGAAGAATCTTGAATCTTGTTTAAAT | + |
|
Preference number: 5 (lower is better) Translates to: PTFLGIHLIHQTHRG*FCYCSWKNLESCLN Trigger: ATTTAAACAAGATTCAAGATTCTTCCAGGAGCAATAGCAAAACCACCCTCTATGCGTTTGATGAATTAGATGAATTCCCAGAAACGTCGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 90 bp | TTTCTGGGAATTCATCTAATTCATCAAACGCATAGAGGGTGGTTTTaGTATTGCTCCTGGAAGAATCTTGAATCTTGTTTAAATCTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: FLGIHLIHQTHRGWF*YCSWKNLESCLNLL Trigger: CAGCAGATTTAAACAAGATTCAAGATTCTTCCAGGAGCAATAGCAAAACCACCCTCTATGCGTTTGATGAATTAGATGAATTCCCAGAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 72 bp | GGCACATCCAGGCCGCGGCGCCTCCTGCAGAGGTCCTaGAGATCCTGTAGGAGTTCCCGCAGCTCCTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: GTSRPRRLLQRS*RSCRSSRSSST Trigger: CGTGGAGGAGCTGCGGGAACTCCTACAGGATCTGCAGGACCTCTGCAGGAGGCGCCGCGGCCTGGATGTGCC 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS TCA 72 bp | AGGTCTTCCCGGTGTCTGAGGCTGTCAGCTTGTGCATaGGGAAGTCAGGCACATCCAGGCCGCGGCGCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: RSSRCLRLSACA*GSQAHPGRGAS Trigger: GGAGGCGCCGCGGCCTGGATGTGCCTGACTTCCTCATGCACAAGCTGACAGCCTCAGACACCGGGAAGACCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 72 bp | GACCCCCTTGGCGTGAGCATTGACGTCAGCACCCGCTaGTATAAGCACTGCTGTGATGTCTCCCTGGCGCCG | + |
|
Preference number: 6 (lower is better) Translates to: DPLGVSIDVSTR*YKHCCDVSLAP Trigger: CGGCGCCAGGGAGACATCACAGCAGTGCTTATAGCAGCGGGTGCTGACGTCAATGCTCACGCCAAGGGGGTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 90 bp | AAAGCCTTCATCAGGCAGGTCTTCCCGGTGTCTGAGGCTGTCAGCTaGTGCATGAGGAAGTCAGGCACATCCAGGCCGCGGCGCCTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: KAFIRQVFPVSEAVS*CMRKSGTSRPRRLL Trigger: CAGGAGGCGCCGCGGCCTGGATGTGCCTGACTTCCTCATGCACAAGCTGACAGCCTCAGACACCGGGAAGACCTGCCTGATGAAGGCTTT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | AGTACAACAGGGTTCCCGCCAGGTGCCGTGGTTCTTTaGCCCATGAGGGGCGCCATCTCCTTGGAGTGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: STTGFPPGAVVL*PMRGAISLEWA Trigger: TGCCCACTCCAAGGAGATGGCGCCCCTCATGGGCAAAAGAACCACGGCACCTGGCGGGAACCCTGTTGTACT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | ATCAGGCAGGTCTTCCCGGTGTCTGAGGCTGTCAGCTaGTGCATGAGGAAGTCAGGCACATCCAGGCCGCGG | + |
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Preference number: 6 (lower is better) Translates to: IRQVFPVSEAVS*CMRKSGTSRPR Trigger: CCGCGGCCTGGATGTGCCTGACTTCCTCATGCACAAGCTGACAGCCTCAGACACCGGGAAGACCTGCCTGAT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | TTGGCAGCCAGCTGCAGTGGTGTGAGCCCATCGTTGTaGCGCATGGTCTCCAGCTCCCAGTTGCCACTCCTC | + |
|
Preference number: 6 (lower is better) Translates to: LAASCSGVSPSL*RMVSSSQLPLL Trigger: GAGGAGTGGCAACTGGGAGCTGGAGACCATGCGCAACAACGATGGGCTCACACCACTGCAGCTGGCTGCCAA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 90 bp | TCACAGTTGCCAGAGAGGCACTGCCGGATGTTGGAGTCCATCGGCTaGGAGAAGATGGGTGGAGAGGTCTTGGTGACCGTGGGGTTGGGC | + |
|
Preference number: 6 (lower is better) Translates to: SQLPERHCRMLESIG*EKMGGEVLVTVGLG Trigger: GCCCAACCCCACGGTCACCAAGACCTCTCCACCCATCTTCTCCAAGCCGATGGACTCCAACATCCGGCAGTGCCTCTCTGGCAACTGTGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 72 bp | CCTCTTCTCTGTCAGTACAACAGGGTTCCCGCCAGGTaGCGTGGTTCTTTTGCCCATGAGGGGCGCCATCTC | + |
|
Preference number: 6 (lower is better) Translates to: PLLCQYNRVPAR*RGSFAHEGRHL Trigger: GAGATGGCGCCCCTCATGGGCAAAAGAACCACGGCACCTGGCGGGAACCCTGTTGTACTGACAGAGAAGAGG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 72 bp | GTGAGCATTGACGTCAGCACCCGCTGCTATAAGCACTaGTGTGATGTCTCCCTGGCGCCGCTCGATGGCGAT | + |
|
Preference number: 6 (lower is better) Translates to: VSIDVSTRCYKH*CDVSLAPLDGD Trigger: ATCGCCATCGAGCGGCGCCAGGGAGACATCACAGCAGTGCTTATAGCAGCGGGTGCTGACGTCAATGCTCAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | CCAGAGAGGCACTGCCGGATGTTGGAGTCCATCGGCTaGGAGAAGATGGGTGGAGAGGTCTTGGTGACCGTG | + |
|
Preference number: 6 (lower is better) Translates to: PERHCRMLESIG*EKMGGEVLVTV Trigger: CACGGTCACCAAGACCTCTCCACCCATCTTCTCCAAGCCGATGGACTCCAACATCCGGCAGTGCCTCTCTGG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | CTGGCTCTCTGCAAGCGCCAGATCCGCTCACTTTCTTaGGAGACGTTCTCCACCGTCTCCCCCATCAGGGCA | + |
|
Preference number: 6 (lower is better) Translates to: LALCKRQIRSLS*ETFSTVSPIRA Trigger: TGCCCTGATGGGGGAGACGGTGGAGAACGTCTCCAAAGAAAGTGAGCGGATCTGGCGCTTGCAGAGAGCCAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 90 bp | GCCCAGTCCGTGAACTTCCTGGACAAGCTCCGGAGAGGCTTCTCCTaGATCTCGCGGCTGAGGATGTACTTCAGGATCTCAGCCTTGCCC | + |
|
Preference number: 6 (lower is better) Translates to: AQSVNFLDKLRRGFS*ISRLRMYFRISALP Trigger: GGGCAAGGCTGAGATCCTGAAGTACATCCTCAGCCGCGAGATCAAGGAGAAGCCTCTCCGGAGCTTGTCCAGGAAGTTCACGGACTGGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 72 bp | TCCGCAGACACAGCCGGAAGTCCTCATCTGCTACTTTaGACAGCTCGCCCATGCGGAATCTGCTTCTCAGCC | + |
|
Preference number: 6 (lower is better) Translates to: SADTAGSPHLLL*TARPCGICFSA Trigger: GGCTGAGAAGCAGATTCCGCATGGGCGAGCTGTGCAAAGTAGCAGATGAGGACTTCCGGCTGTGTCTGCGGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 72 bp | CTTGGCCAGGTTTGCGCTCGGACTGTTGGGATTGGATaGGGTCTCTGTCACATCATCCTGAGGAGACTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LGQVCARTVGIG*GLCHIILRRLG Trigger: CCCCAGTCTCCTCAGGATGATGTGACAGAGACCCCATCCAATCCCAACAGTCCGAGCGCAAACCTGGCCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 72 bp | TGGCTCTCTGCAAGCGCCAGATCCGCTCACTTTCTTTaGAGACGTTCTCCACCGTCTCCCCCATCAGGGCAA | + |
|
Preference number: 6 (lower is better) Translates to: WLSASARSAHFL*RRSPPSPPSGQ Trigger: TTGCCCTGATGGGGGAGACGGTGGAGAACGTCTCCAAAGAAAGTGAGCGGATCTGGCGCTTGCAGAGAGCCA 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 72 bp | GCCCATCGTTGTTGCGCATGGTCTCCAGCTCCCAGTTaGCACTCCTCAGCAGGATCATGTCATACATGCGCT | + |
|
Preference number: 6 (lower is better) Translates to: AHRCCAWSPAPS*HSSAGSCHTCA Trigger: AGCGCATGTATGACATGATCCTGCTGAGGAGTGGCAACTGGGAGCTGGAGACCATGCGCAACAACGATGGGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 72 bp | CTCGTTGATCCGCAGACACAGCCGGAAGTCCTCATCTaGTACTTTGCACAGCTCGCCCATGCGGAATCTGCT | + |
|
Preference number: 6 (lower is better) Translates to: LVDPQTQPEVLI*YFAQLAHAESA Trigger: AGCAGATTCCGCATGGGCGAGCTGTGCAAAGTAGCAGATGAGGACTTCCGGCTGTGTCTGCGGATCAACGAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 72 bp | TGTCATCACAGTTGCCAGAGAGGCACTGCCGGATGTTaGAGTCCATCGGCTTGGAGAAGATGGGTGGAGAGG | + |
|
Preference number: 6 (lower is better) Translates to: CHHSCQRGTAGC*SPSAWRRWVER Trigger: CCTCTCCACCCATCTTCTCCAAGCCGATGGACTCCAACATCCGGCAGTGCCTCTCTGGCAACTGTGATGACA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | AAGTCCTCAGCCACTGTCACCAGCGCGTGCAGGATGTaGTTTCCCCGGGAATCCTGGGAAGTGATGTCTGTC | + |
|
Preference number: 6 (lower is better) Translates to: KSSATVTSACRM*FPRESWEVMSV Trigger: GACAGACATCACTTCCCAGGATTCCCGGGGAAACAACATCCTGCACGCGCTGGTGACAGTGGCTGAGGACTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | AGCCCATCGTTGTTGCGCATGGTCTCCAGCTCCCAGTaGCCACTCCTCAGCAGGATCATGTCATACATGCGC | + |
|
Preference number: 6 (lower is better) Translates to: SPSLLRMVSSSQ*PLLSRIMSYMR Trigger: GCGCATGTATGACATGATCCTGCTGAGGAGTGGCAACTGGGAGCTGGAGACCATGCGCAACAACGATGGGCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | CTGAGGATGTACTTCAGGATCTCAGCCTTGCCCATCTaGGCAGCCAGCTGCAGTGGTGTGAGCCCATCGTTG | + |
|
Preference number: 6 (lower is better) Translates to: LRMYFRISALPI*AASCSGVSPSL Trigger: CAACGATGGGCTCACACCACTGCAGCTGGCTGCCAAGATGGGCAAGGCTGAGATCCTGAAGTACATCCTCAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | ATCCGCAGACACAGCCGGAAGTCCTCATCTGCTACTTaGCACAGCTCGCCCATGCGGAATCTGCTTCTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: IRRHSRKSSSAT*HSSPMRNLLLS Trigger: GCTGAGAAGCAGATTCCGCATGGGCGAGCTGTGCAAAGTAGCAGATGAGGACTTCCGGCTGTGTCTGCGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 90 bp | CGGATGTTGGAGTCCATCGGCTTGGAGAAGATGGGTGGAGAGGTCTaGGTGACCGTGGGGTTGGGCTCAAATCCTTCTATCTCCAGGAAG | + |
|
Preference number: 6 (lower is better) Translates to: RMLESIGLEKMGGEV*VTVGLGSNPSISRK Trigger: CTTCCTGGAGATAGAAGGATTTGAGCCCAACCCCACGGTCACCAAGACCTCTCCACCCATCTTCTCCAAGCCGATGGACTCCAACATCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 90 bp | ACCTCGTTGATCCGCAGACACAGCCGGAAGTCCTCATCTGCTACTTaGCACAGCTCGCCCATGCGGAATCTGCTTCTCAGCCATTCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: TSLIRRHSRKSSSAT*HSSPMRNLLLSHSG Trigger: ACCAGAATGGCTGAGAAGCAGATTCCGCATGGGCGAGCTGTGCAAAGTAGCAGATGAGGACTTCCGGCTGTGTCTGCGGATCAACGAGGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS TCA 72 bp | GTGGCCCAGATGAGGACAAACATCCTCCCTAGGAGCTaGAGCCAACTCATTTTGTGTGTCAGGGCCAAGGGG | + |
|
Preference number: 6 (lower is better) Translates to: VAQMRTNILPRS*SQLILCVRAKG Trigger: CCCCTTGGCCCTGACACACAAAATGAGTTGGCTTCAGCTCCTAGGGAGGATGTTTGTCCTCATCTGGGCCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 72 bp | CTTCCTTGGCCAGGTTTGCGCTCGGACTGTTGGGATTaGATGGGGTCTCTGTCACATCATCCTGAGGAGACT | + |
|
Preference number: 6 (lower is better) Translates to: LPWPGLRSDCWD*MGSLSHHPEET Trigger: AGTCTCCTCAGGATGATGTGACAGAGACCCCATCCAATCCCAACAGTCCGAGCGCAAACCTGGCCAAGGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 72 bp | TGCTCATTCTCCATCAGCAGCTGCACAATCTCAGGCTaGTTAGTACACGCTGCCAAAGCCAGGGGTGTCTCG | + |
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Preference number: 6 (lower is better) Translates to: CSFSISSCTISG*LVHAAKARGVS Trigger: CGAGACACCCCTGGCTTTGGCAGCGTGTACTAACCAGCCTGAGATTGTGCAGCTGCTGATGGAGAATGAGCA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | GAGTCCATCGGCTTGGAGAAGATGGGTGGAGAGGTCTaGGTGACCGTGGGGTTGGGCTCAAATCCTTCTATC | + |
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Preference number: 6 (lower is better) Translates to: ESIGLEKMGGEV*VTVGLGSNPSI Trigger: GATAGAAGGATTTGAGCCCAACCCCACGGTCACCAAGACCTCTCCACCCATCTTCTCCAAGCCGATGGACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | ATGTCATCACAGTTGCCAGAGAGGCACTGCCGGATGTaGGAGTCCATCGGCTTGGAGAAGATGGGTGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: MSSQLPERHCRM*ESIGLEKMGGE Trigger: CTCTCCACCCATCTTCTCCAAGCCGATGGACTCCAACATCCGGCAGTGCCTCTCTGGCAACTGTGATGACAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 90 bp | AGTGGTGTGAGCCCATCGTTGTTGCGCATGGTCTCCAGCTCCCAGTaGCCACTCCTCAGCAGGATCATGTCATACATGCGCTTAACGAAG | + |
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Preference number: 6 (lower is better) Translates to: SGVSPSLLRMVSSSQ*PLLSRIMSYMRLTK Trigger: CTTCGTTAAGCGCATGTATGACATGATCCTGCTGAGGAGTGGCAACTGGGAGCTGGAGACCATGCGCAACAACGATGGGCTCACACCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS TCA 72 bp | TGCTGGTATTTGGGGTTGAAGAAGACCCCCTTGGCGTaGGCATTGACGTCAGCACCCGCTGCTATAAGCACT | + |
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Preference number: 6 (lower is better) Translates to: CWYLGLKKTPLA*ALTSAPAAIST Trigger: AGTGCTTATAGCAGCGGGTGCTGACGTCAATGCTCACGCCAAGGGGGTCTTCTTCAACCCCAAATACCAGCA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS TCA 72 bp | CGTGCAGGATGTTGTTTCCCCGGGAATCCTGGGAAGTaGTGTCTGTCTGCTCATTCTCCATCAGCAGCTGCA | + |
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Preference number: 6 (lower is better) Translates to: RAGCCFPGNPGK*CLSAHSPSAAA Trigger: TGCAGCTGCTGATGGAGAATGAGCAGACAGACATCACTTCCCAGGATTCCCGGGGAAACAACATCCTGCACG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 72 bp | GAAGAAGTGTGCACTCTTCTTGGTGGGGGTGAGATCTaGTGGCCTCTTCTCTGTCAGTACAACAGGGTTCCC | + |
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Preference number: 6 (lower is better) Translates to: EEVCTLLGGGEI*WPLLCQYNRVP Trigger: GGGAACCCTGTTGTACTGACAGAGAAGAGGCCAGCAGATCTCACCCCCACCAAGAAGAGTGCACACTTCTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 72 bp | TCTGTTCTTCCTTGGCCAGGTTTGCGCTCGGACTGTTaGGATTGGATGGGGTCTCTGTCACATCATCCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SVLPWPGLRSDC*DWMGSLSHHPE Trigger: CTCAGGATGATGTGACAGAGACCCCATCCAATCCCAACAGTCCGAGCGCAAACCTGGCCAAGGAAGAACAGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | GTGAACTTCCTGGACAAGCTCCGGAGAGGCTTCTCCTaGATCTCGCGGCTGAGGATGTACTTCAGGATCTCA | + |
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Preference number: 6 (lower is better) Translates to: VNFLDKLRRGFS*ISRLRMYFRIS Trigger: TGAGATCCTGAAGTACATCCTCAGCCGCGAGATCAAGGAGAAGCCTCTCCGGAGCTTGTCCAGGAAGTTCAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 90 bp | ATCGGCTTGGAGAAGATGGGTGGAGAGGTCTTGGTGACCGTGGGGTaGGGCTCAAATCCTTCTATCTCCAGGAAGAAGTGTGCACTCTTC | + |
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Preference number: 6 (lower is better) Translates to: IGLEKMGGEVLVTVG*GSNPSISRKKCALF Trigger: GAAGAGTGCACACTTCTTCCTGGAGATAGAAGGATTTGAGCCCAACCCCACGGTCACCAAGACCTCTCCACCCATCTTCTCCAAGCCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS TCA 72 bp | TCTCCAGGAAGAAGTGTGCACTCTTCTTGGTGGGGGTaGGATCTGCTGGCCTCTTCTCTGTCAGTACAACAG | + |
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Preference number: 6 (lower is better) Translates to: SPGRSVHSSWWG*DLLASSLSVQQ Trigger: CTGTTGTACTGACAGAGAAGAGGCCAGCAGATCTCACCCCCACCAAGAAGAGTGCACACTTCTTCCTGGAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS TCA 72 bp | CTGTTGGGATTGGATGGGGTCTCTGTCACATCATCCTaGGGAGACTGGGGAGAGTCCATGTCATCACAGTTG | + |
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Preference number: 6 (lower is better) Translates to: LLGLDGVSVTSS*GDWGESMSSQL Trigger: CAACTGTGATGACATGGACTCTCCCCAGTCTCCTCAGGATGATGTGACAGAGACCCCATCCAATCCCAACAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 72 bp | GTTGGGCTCAAATCCTTCTATCTCCAGGAAGAAGTGTaGACTCTTCTTGGTGGGGGTGAGATCTGCTGGCCT | + |
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Preference number: 6 (lower is better) Translates to: VGLKSFYLQEEV*TLLGGGEICWP Trigger: AGGCCAGCAGATCTCACCCCCACCAAGAAGAGTGCACACTTCTTCCTGGAGATAGAAGGATTTGAGCCCAAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 72 bp | TTGTTTCCCCGGGAATCCTGGGAAGTGATGTCTGTCTaGTCATTCTCCATCAGCAGCTGCACAATCTCAGGC | + |
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Preference number: 6 (lower is better) Translates to: LFPRESWEVMSV*SFSISSCTISG Trigger: GCCTGAGATTGTGCAGCTGCTGATGGAGAATGAGCAGACAGACATCACTTCCCAGGATTCCCGGGGAAACAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 72 bp | AAGCCAACTCATTTTGTGTGTCAGGGCCAAGGGGTGTaGGAGATCCTCATCTTCCCGAGGACGGTAGTAAGA | + |
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Preference number: 6 (lower is better) Translates to: KPTHFVCQGQGV*EILIFPRTVVR Trigger: TCTTACTACCGTCCTCGGGAAGATGAGGATCTCCCACACCCCTTGGCCCTGACACACAAAATGAGTTGGCTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | GAGAAGATGGGTGGAGAGGTCTTGGTGACCGTGGGGTaGGGCTCAAATCCTTCTATCTCCAGGAAGAAGTGT | + |
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Preference number: 6 (lower is better) Translates to: EKMGGEVLVTVG*GSNPSISRKKC Trigger: ACACTTCTTCCTGGAGATAGAAGGATTTGAGCCCAACCCCACGGTCACCAAGACCTCTCCACCCATCTTCTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 90 bp | ATGTCGTTCTCCTCAGCGAAGGCAAGCAGAATCCGCACGATCTCTTaGGTGTTGGGATTGATGTTGAGCAAAGCCTTCATCAGGCAGGTC | + |
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Preference number: 6 (lower is better) Translates to: MSFSSAKASRIRTIS*VLGLMLSKAFIRQV Trigger: GACCTGCCTGATGAAGGCTTTGCTCAACATCAATCCCAACACCAAAGAGATCGTGCGGATTCTGCTTGCCTTCGCTGAGGAGAACGACAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 90 bp | TTAAGGAAGGACACGTGTGTTTTCCATTCCGTCCACTTCACCTCGTaGATCCGCAGACACAGCCGGAAGTCCTCATCTGCTACTTTGCAC | + |
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Preference number: 6 (lower is better) Translates to: LRKDTCVFHSVHFTS*IRRHSRKSSSATLH Trigger: GTGCAAAGTAGCAGATGAGGACTTCCGGCTGTGTCTGCGGATCAACGAGGTGAAGTGGACGGAATGGAAAACACACGTGTCCTTCCTTAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS TCA 72 bp | CCAGCACAGAGTTATCCGTCGTTGTGTCTACATTGGTaGGGTCATAGAGTGAGGATGACACAGGCCCATACG | + |
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Preference number: 6 (lower is better) Translates to: PAQSYPSLCLHW*GHRVRMTQAHT Trigger: CGTATGGGCCTGTGTCATCCTCACTCTATGACCTCACCAATGTAGACACAACGACGGATAACTCTGTGCTGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | TTCTTCAGTCGCTTCTTCTTCTGCCTCTGTTCTTCCTaGGCCAGGTTTGCGCTCGGACTGTTGGGATTGGAT | + |
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Preference number: 6 (lower is better) Translates to: FFSRFFFCLCSS*ARFALGLLGLD Trigger: ATCCAATCCCAACAGTCCGAGCGCAAACCTGGCCAAGGAAGAACAGAGGCAGAAGAAGAAGCGACTGAAGAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | GCGAAGGCAAGCAGAATCCGCACGATCTCTTTGGTGTaGGGATTGATGTTGAGCAAAGCCTTCATCAGGCAG | + |
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Preference number: 6 (lower is better) Translates to: AKASRIRTISLV*GLMLSKAFIRQ Trigger: CTGCCTGATGAAGGCTTTGCTCAACATCAATCCCAACACCAAAGAGATCGTGCGGATTCTGCTTGCCTTCGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS TCA 72 bp | AGGATCATGTCATACATGCGCTTAACGAAGTCATTCTaGGTCTTGAAGTCCTCAGCCACTGTCACCAGCGCG | + |
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Preference number: 6 (lower is better) Translates to: RIMSYMRLTKSF*VLKSSATVTSA Trigger: CGCGCTGGTGACAGTGGCTGAGGACTTCAAGACTCAGAATGACTTCGTTAAGCGCATGTATGACATGATCCT 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CAA 72 bp | TCCTCAGCGAAGGCAAGCAGAATCCGCACGATCTCTTaGGTGTTGGGATTGATGTTGAGCAAAGCCTTCATC | + |
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Preference number: 6 (lower is better) Translates to: SSAKASRIRTIS*VLGLMLSKAFI Trigger: GATGAAGGCTTTGCTCAACATCAATCCCAACACCAAAGAGATCGTGCGGATTCTGCTTGCCTTCGCTGAGGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 72 bp | TTGGCAAATTTCTTCCATTTCGTGTGTAGCAGCGTATaGAGAGGCTCCAGGGTCAGCATCTCATGTCGGTTA | + |
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Preference number: 6 (lower is better) Translates to: LANFFHFVCSSV*RGSRVSISCRL Trigger: TAACCGACATGAGATGCTGACCCTGGAGCCTCTGCATACGCTGCTACACACGAAATGGAAGAAATTTGCCAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 72 bp | CATCTGCTACTTTGCACAGCTCGCCCATGCGGAATCTaGTTCTCAGCCATTCTGGTAACATTTTCTCAAACT | + |
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Preference number: 6 (lower is better) Translates to: HLLLCTARPCGI*FSAILVTFSQT Trigger: AGTTTGAGAAAATGTTACCAGAATGGCTGAGAAGCAGATTCCGCATGGGCGAGCTGTGCAAAGTAGCAGATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 72 bp | ATTCTGGTAACATTTTCTCAAACTCCAAGATGGTCCTaGCTCTCTGCAAGCGCCAGATCCGCTCACTTTCTT | + |
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Preference number: 6 (lower is better) Translates to: ILVTFSQTPRWS*LSASARSAHFL Trigger: AAGAAAGTGAGCGGATCTGGCGCTTGCAGAGAGCCAGGACCATCTTGGAGTTTGAGAAAATGTTACCAGAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS TCA 72 bp | TCTCATGTCGGTTATCAATGTTGGTGTTGTAGACGATaGTTTCCAGCACAGAGTTATCCGTCGTTGTGTCTA | + |
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Preference number: 6 (lower is better) Translates to: SHVGYQCWCCRR*FPAQSYPSLCL Trigger: TAGACACAACGACGGATAACTCTGTGCTGGAAATCATCGTCTACAACACCAACATTGATAACCGACATGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 72 bp | CATCAAACGCATAGAGGGTGGTTTTGCTATTGCTCCTaGAAGAATCTTGAATCTTGTTTAAATCTGCTGTCC | + |
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Preference number: 6 (lower is better) Translates to: HQTHRGWFCYCS*KNLESCLNLLS Trigger: GGACAGCAGATTTAAACAAGATTCAAGATTCTTCCAGGAGCAATAGCAAAACCACCCTCTATGCGTTTGATG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS CCA 72 bp | CTGGGAATTCATCTAATTCATCAAACGCATAGAGGGTaGTTTTGCTATTGCTCCTGGAAGAATCTTGAATCT | + |
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Preference number: 6 (lower is better) Translates to: LGIHLIHQTHRG*FCYCSWKNLES Trigger: AGATTCAAGATTCTTCCAGGAGCAATAGCAAAACCACCCTCTATGCGTTTGATGAATTAGATGAATTCCCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 72 bp | CTAATTCATCAAACGCATAGAGGGTGGTTTTGCTATTaGTCCTGGAAGAATCTTGAATCTTGTTTAAATCTG | + |
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Preference number: 6 (lower is better) Translates to: LIHQTHRGWFCY*SWKNLESCLNL Trigger: CAGATTTAAACAAGATTCAAGATTCTTCCAGGAGCAATAGCAAAACCACCCTCTATGCGTTTGATGAATTAG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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| CDS GCA 72 bp | ATTCATCTAATTCATCAAACGCATAGAGGGTGGTTTTaGTATTGCTCCTGGAAGAATCTTGAATCTTGTTTA | + |
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Preference number: 6 (lower is better) Translates to: IHLIHQTHRGWF*YCSWKNLESCL Trigger: TAAACAAGATTCAAGATTCTTCCAGGAGCAATAGCAAAACCACCCTCTATGCGTTTGATGAATTAGATGAAT 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000049676.3 |
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