RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRPS1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038679

Ensembl transcript IDs: ENSMUST00000077935.6, ENSMUST00000165201.9, ENSMUST00000183421.2, ENSMUST00000183757.8, ENSMUST00000183997.8, ENSMUST00000184458.8, ENSMUST00000184885.8, ENSMUST00000185183.2

Found 727 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR TCA 90 bp ATCTCAAGTATGGGTAAGAGGCTGGACTATGGCCTAGAGACAGCATaGCCACCAGACTACCAGCATAGTCTCTCCATAGTTCCACCTCCA +
Preference number: 1 (lower is better)
Translates to: ISSMGKRLDYGLETA*PPDYQHSLSIVPPP
Trigger: TGGAGGTGGAACTATGGAGAGACTATGCTGGTAGTCTGGTGGTCATGCTGTCTCTAGGCCATAGTCCAGCCTCTTACCCATACTTGAGAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR TCA 90 bp CCTGCCTTGGTACATCTCTGCCCTGGCATCTTCCAGAGGGCCCAATaGATCTATGTAAGTGGGAAATGCTTGAGAAACTGTTGCACTATG +
Preference number: 1 (lower is better)
Translates to: PALVHLCPGIFQRAQ*IYVSGKCLRNCCTM
Trigger: CATAGTGCAACAGTTTCTCAAGCATTTCCCACTTACATAGATTCATTGGGCCCTCTGGAAGATGCCAGGGCAGAGATGTACCAAGGCAGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR CCA 90 bp GCTATACTGTACATCATACAGGCTCATCTACCTACGGTTCTACAATaGGAGTGGCCTGAGGTGAGCATGTTCCTTGAGGATACAGGACTG +
Preference number: 1 (lower is better)
Translates to: AILYIIQAHLPTVLQ*EWPEVSMFLEDTGL
Trigger: CAGTCCTGTATCCTCAAGGAACATGCTCACCTCAGGCCACTCCCATTGTAGAACCGTAGGTAGATGAGCCTGTATGATGTACAGTATAGC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR TCA 90 bp AGAGAAGGTGAGAGAGATGTAGGAAAAGGAAGGACGTGCATGAGTTaGCTCTGGCCCAGTGTTGAAGCCAAAGCTCAGTATAGAAGTGAC +
Preference number: 1 (lower is better)
Translates to: REGERDVGKGRTCMS*LWPSVEAKAQYRSD
Trigger: GTCACTTCTATACTGAGCTTTGGCTTCAACACTGGGCCAGAGTCAACTCATGCACGTCCTTCCTTTTCCTACATCTCTCTCACCTTCTCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR TCA 90 bp CTCATGTACTTAGAGTCGTGTAGTGTCTCCCAGGCCACAATGCTCTaGGGTGGGCTGGCTCCTTATGGTTTTATATCCCAAACAACAGTA +
Preference number: 1 (lower is better)
Translates to: LMYLESCSVSQATML*GGLAPYGFISQTTV
Trigger: TACTGTTGTTTGGGATATAAAACCATAAGGAGCCAGCCCACCTCAGAGCATTGTGGCCTGGGAGACACTACACGACTCTAAGTACATGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR GCA 90 bp ATGCTCTGCAGGGCACTTCCTTCCAGAATGGACGGACAGTGTATTTaGTATGGCAATAAAGCATCCCCTACTCCACCACCAAGAATACAA +
Preference number: 1 (lower is better)
Translates to: MLCRALPSRMDGQCI*YGNKASPTPPPRIQ
Trigger: TTGTATTCTTGGTGGTGGAGTAGGGGATGCTTTATTGCCATAGCAAATACACTGTCCGTCCATTCTGGAAGGAAGTGCCCTGCAGAGCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR TCA 90 bp GGAAATGTCAGTGATGTGGAAAAGGAAGCCAGGAGGAGGCTCAGGTaGTCTGAAGGAGACCACCCAAGTGTACACTATTTATTGTTAAGT +
Preference number: 1 (lower is better)
Translates to: GNVSDVEKEARRRLR*SEGDHPSVHYLLLS
Trigger: ACTTAACAATAAATAGTGTACACTTGGGTGGTCTCCTTCAGATCACCTGAGCCTCCTCCTGGCTTCCTTTTCCACATCACTGACATTTCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR CCA 90 bp TGGCCTAAGTATGTTACTATGGTTACTCTAAGTAAACACACAGGCTaGAGAGAAGCTCACTTCCCAGGTTCCATCCACTCTGCTTCAGAA +
Preference number: 1 (lower is better)
Translates to: WPKYVTMVTLSKHTG*REAHFPGSIHSASE
Trigger: TTCTGAAGCAGAGTGGATGGAACCTGGGAAGTGAGCTTCTCTCCAGCCTGTGTGTTTACTTAGAGTAACCATAGTAACATACTTAGGCCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR TCA 90 bp AGTGGGAAATGCTTGAGAAACTGTTGCACTATGATCAGAAACACATaGGAACACTCCGAACTAGCAAGCAACAACCACAAGGAAACACCC +
Preference number: 1 (lower is better)
Translates to: SGKCLRNCCTMIRNT*EHSELASNNHKETP
Trigger: GGGTGTTTCCTTGTGGTTGTTGCTTGCTAGTTCGGAGTGTTCTCATGTGTTTCTGATCATAGTGCAACAGTTTCTCAAGCATTTCCCACT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR CCA 90 bp CCTACGTTGGCAGATAATGCAGAGGAAGTGAAAGGGCAGTTGAAATaGTGCAATAGAAACTTGCAGTCAGGGAATTTACGGGAAGTAAAG +
Preference number: 1 (lower is better)
Translates to: PTLADNAEEVKGQLK*CNRNLQSGNLREVK
Trigger: CTTTACTTCCCGTAAATTCCCTGACTGCAAGTTTCTATTGCACCATTTCAACTGCCCTTTCACTTCCTCTGCATTATCTGCCAACGTAGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR GCA 90 bp ACGTTGGCAGATAATGCAGAGGAAGTGAAAGGGCAGTTGAAATGGTaGAATAGAAACTTGCAGTCAGGGAATTTACGGGAAGTAAAGGAA +
Preference number: 1 (lower is better)
Translates to: TLADNAEEVKGQLKW*NRNLQSGNLREVKE
Trigger: TTCCTTTACTTCCCGTAAATTCCCTGACTGCAAGTTTCTATTGCACCATTTCAACTGCCCTTTCACTTCCTCTGCATTATCTGCCAACGT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR TCA 90 bp CAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTTaGGCTATGCCACAGACAGGTGAGATTAAAACAGGGTCCTTTAAC +
Preference number: 1 (lower is better)
Translates to: QSSSFHLFISVLVNI*AMPQTGEIKTGSFN
Trigger: GTTAAAGGACCCTGTTTTAATCTCACCTGTCTGTGGCATAGCTCAAATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR GCA 90 bp ATACAGGACTGCTTTCTTTCTTTCCAAAGTTACTTGGAGAGCATCTaGTCCTGTCAGATGACAAGAAAACGGCTTCATTTCTTGATGGTA +
Preference number: 1 (lower is better)
Translates to: IQDCFLSFQSYLESI*SCQMTRKRLHFLMV
Trigger: TACCATCAAGAAATGAAGCCGTTTTCTTGTCATCTGACAGGAGCAGATGCTCTCCAAGTAACTTTGGAAAGAAAGAAAGCAGTCCTGTAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR CCA 90 bp AGAATATGTGAGCATACTTTATCCATTGAACTAGGTGGATTGTTGTaGATTTTTACCTCTTCTTCATCCCTGCCTTGGTACATCTCTGCC +
Preference number: 1 (lower is better)
Translates to: RICEHTLSIELGGLL*IFTSSSSLPWYISA
Trigger: GGCAGAGATGTACCAAGGCAGGGATGAAGAAGAGGTAAAAATCCACAACAATCCACCTAGTTCAATGGATAAAGTATGCTCACATATTCT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR TCA 90 bp AAGGAAGTTAAATATGTTGTTTGGGAAATTTCCTTTTCAGATCTTTaGCTCCTCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCA +
Preference number: 1 (lower is better)
Translates to: KEVKYVVWEISFSDL*LLSDCPLYSEMQPP
Trigger: TGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGAGGAGTCAAAGATCTGAAAAGGAAATTTCCCAAACAACATATTTAACTTCCTT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR GCA 90 bp ATGCACACATACACACACGCACACATACACACTAGAGATACCTACTaGAATAGAAATAGTTGCTTCATTACCTTGTTTGCTACATTTGCA +
Preference number: 1 (lower is better)
Translates to: MHTYTHAHIHTRDTY*NRNSCFITLFATFA
Trigger: TGCAAATGTAGCAAACAAGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTGCGTGTGTGTATGTGTGCAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR GCA 90 bp GGTAGAACACGGCATCTCACTCCCATCAGTTCTATACTTCTACTGTaGACTTATAAGCATGATACTAGTTTGTGGTTTTATACAAAGAAC +
Preference number: 1 (lower is better)
Translates to: GRTRHLTPISSILLL*TYKHDTSLWFYTKN
Trigger: GTTCTTTGTATAAAACCACAAACTAGTATCATGCTTATAAGTGCACAGTAGAAGTATAGAACTGATGGGAGTGAGATGCCGTGTTCTACC
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR CCA 90 bp AGTATAGAAGTGACAAATAACTTGAGAAGAATGGCAGGGTTGAAATaGCACAGTACTTTAGTTGGTATCTCCAGAAGACTTTTCCAAGAG +
Preference number: 1 (lower is better)
Translates to: SIEVTNNLRRMAGLK*HSTLVGISRRLFQE
Trigger: CTCTTGGAAAAGTCTTCTGGAGATACCAACTAAAGTACTGTGCCATTTCAACCCTGCCATTCTTCTCAAGTTATTTGTCACTTCTATACT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR GCA 90 bp TGCACTTATAAGCATGATACTAGTTTGTGGTTTTATACAAAGAACTaGATTATTTCTGCCTTTAGTAAACGTGGCCATGATGCTCTGCAG +
Preference number: 1 (lower is better)
Translates to: CTYKHDTSLWFYTKN*IISAFSKRGHDALQ
Trigger: CTGCAGAGCATCATGGCCACGTTTACTAAAGGCAGAAATAATGCAGTTCTTTGTATAAAACCACAAACTAGTATCATGCTTATAAGTGCA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR TCA 90 bp TCACAGCCAAGAGGGTTCTTCTCTGACCTAGAGGTCAAAGCCCCAGCAGAGTGGACTGAGGTAAAATGCTaGAGGATGCTCTCTGCCTTG +
Preference number: 2 (lower is better)
Translates to: SQPRGFFSDLEVKAPAEWTEVKC*RMLSAL
Trigger: CAAGGCAGAGAGCATCCTTCAGCATTTTACCTCAGT...CCACTCTGCTGGGGCTTTGACCTCTAGGTCAGAGAAGAACCCTCTTGGCTGTGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR TCA 90 bp CAACTACTTATCATTCCAAGTCCTTGGAAGGAGGCAGGAAGGGTGACACACTGGAAGCGGAAATGTCAGTaGTGTGGAAAAGGAAGCCAG +
Preference number: 2 (lower is better)
Translates to: QLLIIPSPWKEAGRVTHWKRKCQ*CGKGSQ
Trigger: CTGGCTTCCTTTTCCACATCACTGACATTTCCGCTT...CCAGTGTGTCACCCTTCCTGCCTCCTTCCAAGGACTTGGAATGATAAGTAGTTG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR TCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCCCTTGTAGCAAGCATTaGGGCTCGACTAACAGCACC +
Preference number: 2 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSPCSKH*GSTNST
Trigger: GGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGG...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTACCTTGCATGCTGCCTaGCCACAAAGTTTGGACATT +
Preference number: 2 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILTLHAA*PQSLDI
Trigger: AATGTCCAAACTTTGTGGTCAGGCAGCATGCAAGGT...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCAGTACTTTCCTGGGGGTaGGAGAAGGTGAGAGAGATG +
Preference number: 2 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPVLSWG*EKVREM
Trigger: CATCTCTCTCACCTTCTCTCACCCCCAGGAAAGTAC...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp TTTTCTCCGCTTGTCACTGTGACCAGGTTTCTTTCAAAGCTCGTGAAGATATTAGGGAGTGGCCTGAGGTaGGCATGTTCCTTGAGGATA +
Preference number: 2 (lower is better)
Translates to: FSPLVTVTRFLSKLVKILGSGLR*ACSLRI
Trigger: TATCCTCAAGGAACATGCTCACCTCAGGCCACTCCC...TAATATCTTCACGAGCTTTGAAAGAAACCTGGTCACAGTGACAAGCGGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR CCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTGGAACAGTCACAGACTaGTTAACTCTACCTGCCATC +
Preference number: 2 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILGTVTD*LTLPAI
Trigger: GATGGCAGGTAGAGTTAACCAGTCTGTGACTGTTCC...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CCA 90 bp AGGACTGCTTTCTTTCTTTCCAAAGTTACTTGGAGAGCATCTGCTCCTGTCAGAAAAGCCCCAGCAGAGTaGGCTCCATTTCCTAAACAG +
Preference number: 2 (lower is better)
Translates to: RTAFFLSKVTWRASAPVRKAPAE*APFPKQ
Trigger: CTGTTTAGGAAATGGAGCCCACTCTGCTGGGGCTTT...TCTGACAGGAGCAGATGCTCTCCAAGTAACTTTGGAAAGAAAGAAAGCAGTCCT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR CCA 90 bp CCAAAATTTTCTCCGCTTGTCACTGTGACCAGGTTTCTTTCAAAGCTCGTGAAGATCATTCCAAGTCCTTaGAAGGAGGCAGGAAGGGTG +
Preference number: 2 (lower is better)
Translates to: PKFSPLVTVTRFLSKLVKIIPSP*KEAGRV
Trigger: CACCCTTCCTGCCTCCTTCCAAGGACTTGGAATGAT...CTTCACGAGCTTTGAAAGAAACCTGGTCACAGTGACAAGCGGAGAAAATTTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR TCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTAGACAGGTCACTTTGTaGTGTTTTACAGCCACAAGG +
Preference number: 2 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILRQVTL*CFTATR
Trigger: CCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCT...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp CAACTACTTATCATTCCAAGTCCTTGGAAGGAGGCAGGAAGGGTGACACACTGGCTTTTTCATTCTTTCTaGCAACTGAACTACAGGCAC +
Preference number: 2 (lower is better)
Translates to: QLLIIPSPWKEAGRVTHWLFHSF*QLNYRH
Trigger: GTGCCTGTAGTTCAGTTGTCAGAAAGAATGAAAAAG...CCAGTGTGTCACCCTTCCTGCCTCCTTCCAAGGACTTGGAATGATAAGTAGTTG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR TCA 90 bp CCAAAATTTTCTCCGCTTGTCACTGTGACCAGGTTTCTTTCAAAGCTCGTGAAGTCAGAGAATCTGAAGTaGGAACAGAGCAGTCGAGCT +
Preference number: 2 (lower is better)
Translates to: PKFSPLVTVTRFLSKLVKSENLK*EQSSRA
Trigger: AGCTCGACTGCTCTGTTCTCACTTCAGATTCTCTGA...CTTCACGAGCTTTGAAAGAAACCTGGTCACAGTGACAAGCGGAGAAAATTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR TCA 90 bp CCATCAGTTCTATACTTCTACTGTGCACTTATAAGCATGATACTAGTTTGTGGTAGGAGGAGGCTCAGGTaGTCTGAAGGAGACCACCCA +
Preference number: 2 (lower is better)
Translates to: PSVLYFYCALISMILVCGRRRLR*SEGDHP
Trigger: TGGGTGGTCTCCTTCAGATCACCTGAGCCTCCTCCT...ACCACAAACTAGTATCATGCTTATAAGTGCACAGTAGAAGTATAGAACTGATGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR GCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCTATGGTTGTTATCCTTaGTTTGCTCGGGTGCAGGAC +
Preference number: 2 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSYGCYP*FARVQD
Trigger: GTCCTGCACCCGAGCAAAGCAAGGATAACAACCATA...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CCA 90 bp CTTCCCAGGTTCCATCCACTCTGCTTCAGAAACTCCAAAGTTAATGTTCTTCCCCTTTCCAAAGTTACTTaGAGAGCATCTGCTCCTGTC +
Preference number: 2 (lower is better)
Translates to: LPRFHPLCFRNSKVNVLPLSKVT*RASAPV
Trigger: GACAGGAGCAGATGCTCTCCAAGTAACTTTGGAAAG...GGGAAGAACATTAACTTTGGAGTTTCTGAAGCAGAGTGGATGGAACCTGGGAAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR TCA 90 bp AGGACTGCTTTCTTTCTTTCCAAAGTTACTTGGAGAGCATCTGCTCCTGTCAGAAGCCTTCATCACAGCTaGGAGCAAAGACAAATAGGT +
Preference number: 2 (lower is better)
Translates to: RTAFFLSKVTWRASAPVRSLHHS*EQRQIG
Trigger: ACCTATTTGTCTTTGCTCTCAGCTGTGATGAAGGCT...TCTGACAGGAGCAGATGCTCTCCAAGTAACTTTGGAAAGAAAGAAAGCAGTCCT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTAGGTTTCTGAATGGATaGGCCAATAGCCAGCCTAAT +
Preference number: 2 (lower is better)
Translates to: PTVTILTARSTSLTTVHIRFLNG*ANSQPN
Trigger: ATTAGGCTGGCTATTGGCCCATCCATTCAGAAACCT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR CAA 90 bp GAGGGCCCAATGAATCTATGTAAGTGGGAAATGCTTGAGAAACTGTaGCACTATGATCAGAAACACATGAGAACACTCCGAACTAGCAAG +
Preference number: 2 (lower is better)
Translates to: EGPMNLCKWEMLEKL*HYDQKHMRTLRTSK
Trigger: CTTGCTAGTTCGGAGTGTTCTCATGTGTTTCTGATCATAGTGCAACAGTTTCTCAAGCATTTCCCACTTACATAGATTCATTGGGCCCTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTTTAGCCCTATTTCCCTaGGCAGTTATGCCGAGGAGC +
Preference number: 2 (lower is better)
Translates to: FECQSSSFHLFISVLVNILALFP*AVMPRS
Trigger: GCTCCTCGGCATAACTGCTCAGGGAAATAGGGCTAA...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTTAGCCCTATTTCCCTaGGCAGTTATGCCGAGGAGC +
Preference number: 2 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLALFP*AVMPRS
Trigger: GCTCCTCGGCATAACTGCTCAGGGAAATAGGGCTAA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTTAGCCCTATTTCCCTaGGCAGTTATGCCGAGGAGC +
Preference number: 2 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPLALFP*AVMPRS
Trigger: GCTCCTCGGCATAACTGCTCAGGGAAATAGGGCTAA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCCTTGTAGCAAGCATTaGGGCTCGACTAACAGCACC +
Preference number: 2 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHPCSKH*GSTNST
Trigger: GGTGCTGTTAGTCGAGCCTCAATGCTTGCTACAAGG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR TCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCATTGCCCTCTTTATTCTaGGATGCAGCCACCAAAATC +
Preference number: 2 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPLPSLF*DAATKI
Trigger: GATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAA...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp CTTCCCAGGTTCCATCCACTCTGCTTCAGAAACTCCAAAGTTAATGTTCTTCCCCATGATCACCAAGATTaGTTAACAAGCCTTCATCAC +
Preference number: 2 (lower is better)
Translates to: LPRFHPLCFRNSKVNVLPHDHQD*LTSLHH
Trigger: GTGATGAAGGCTTGTTAATCAATCTTGGTGATCATG...GGGAAGAACATTAACTTTGGAGTTTCTGAAGCAGAGTGGATGGAACCTGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR TCA 90 bp TCATTTCTTGATGGTACAAGGTACTCCCCTCTTCTATATTCAAGGCTTAATTCTACAGAGCAGTCGAGCTaGTTCACAGCCAAGAGGGTT +
Preference number: 2 (lower is better)
Translates to: SFLDGTRYSPLLYSRLNSTEQSS*FTAKRV
Trigger: AACCCTCTTGGCTGTGAATCAGCTCGACTGCTCTGT...AGAATTAAGCCTTGAATATAGAAGAGGGGAGTACCTTGTACCATCAAGAAATGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR GCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTTTCCCTGAGCAGTTATaGCGAGGAGCTCTCCCTTCA +
Preference number: 2 (lower is better)
Translates to: FECQSSSFHLFISVLVNIFPEQL*RGALPS
Trigger: TGAAGGGAGAGCTCCTCGGCATAACTGCTCAGGGAA...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR GCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCATCATAAACAGGATGTaGTACCACAGGCTTCCACAA +
Preference number: 2 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSIINRM*YHRLPQ
Trigger: TTGTGGAAGCCTGTGGTAGCACATCCTGTTTATGAT...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR CAA 90 bp GAGAGCATCTGCTCCTGTCAGATGACAAGAAAACGGCTTCATTTCTaGATGGTACAAGGTACTCCCCTCTTCTATATTCAAGGCTTAATT +
Preference number: 2 (lower is better)
Translates to: ESICSCQMTRKRLHF*MVQGTPLFYIQGLI
Trigger: AATTAAGCCTTGAATATAGAAGAGGGGAGTACCTTGTACCATCAAGAAATGAAGCCGTTTTCTTGTCATCTGACAGGAGCAGATGCTCTC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTCTGAAACATGGTCAATaGGAGGAGACTAATTTGAGA +
Preference number: 2 (lower is better)
Translates to: PTVTILTARSTSLTTVHILKHGQ*EETNLR
Trigger: TCTCAAATTAGTCTCCTCTCATTGACCATGTTTCAG...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR GCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTTGCTTGAGAAACTGTTaGACTATGATCAGAAACACA +
Preference number: 2 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILCLRNC*TMIRNT
Trigger: TGTGTTTCTGATCATAGTGCAACAGTTTCTCAAGCA...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTCTAGGTGGATTGTTGTaGATTTTTACCTCTTCTTCA +
Preference number: 2 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILLGGLL*IFTSSS
Trigger: TGAAGAAGAGGTAAAAATCCACAACAATCCACCTAG...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTACCTTGCATGCTGCCTaGCCACAAAGTTTGGACATT +
Preference number: 2 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPTLHAA*PQSLDI
Trigger: AATGTCCAAACTTTGTGGTCAGGCAGCATGCAAGGT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR TCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCTTATTTCCGTTCTTGTaGACATTTGAGCTATGCCAC +
Preference number: 2 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGLFPFL*TFELCH
Trigger: GTGGCATAGCTCAAATGTTCACAAGAACGGAAATAA...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCAATATATTAACTCTGTaGGCTCCTTCCCGTTCTCAT +
Preference number: 2 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGNILTL*APSRSH
Trigger: ATGAGAACGGGAAGGAGCTCACAGAGTTAATATATT...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp CTTAATCAACTACTTATCATTCCAAGTCCTTGGAAGGAGGCAGGAAGGGTGACACTTTGTTGCTTTGCATaGTCACCAAGATTGATTAAC +
Preference number: 2 (lower is better)
Translates to: LNQLLIIPSPWKEAGRVTLCCFA*SPRLIN
Trigger: GTTAATCAATCTTGGTGATCATGCAAAGCAACAAAG...TGTCACCCTTCCTGCCTCCTTCCAAGGACTTGGAATGATAAGTAGTTGATTAAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR GCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCAGCTTTAGTTACAATGTaGCAAGTGAGATTAGTGACC +
Preference number: 2 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPALVTM*QVRLVT
Trigger: GGTCACTAATCTCACTTGGCACATTGTAACTAAAGC...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCGTAACCTTGCATGCTaGCTGACCACAAAGTTTGGA +
Preference number: 2 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHRNLAC*LTTKFG
Trigger: TCCAAACTTTGTGGTCAGGCAGCATGCAAGGTTACG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR GCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCCTTGTTTGCTACATTTaGAAATGTAAACAGCTAGGC +
Preference number: 2 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSLVCYI*KCKQLG
Trigger: GCCTAGCTGTTTACATTTGCAAATGTAGCAAACAAG...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTAATGAAGGGATTGATTaGTACATATACCAACTGTCA +
Preference number: 2 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILNEGID*YIYQLS
Trigger: TGACAGTTGGTATATGTACCAATCAATCCCTTCATT...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATGGAGCTCTCCCTTCATaGATAGTTTTTACAAAGCCT +
Preference number: 2 (lower is better)
Translates to: SQIALFILRCSHQNPKKDGALPS*IVFTKP
Trigger: AGGCTTTGTAAAAACTATCCATGAAGGGAGAGCTCC...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR CAA 90 bp GAGAGAATATGTGAGCATACTTTATCCATTGAACTAGGTGGATTGTaGTGGATTTTTACCTCTTCTTCATCCCTGCCTTGGTACATCTCT +
Preference number: 2 (lower is better)
Translates to: ERICEHTLSIELGGL*WIFTSSSSLPWYIS
Trigger: AGAGATGTACCAAGGCAGGGATGAAGAAGAGGTAAAAATCCACAACAATCCACCTAGTTCAATGGATAAAGTATGCTCACATATTCTCTC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCTCTAGTCTTTTGAAGTaGAGGGATTGCTTTAGTTAC +
Preference number: 2 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGSSLLK*RDCFSY
Trigger: GTAACTAAAGCAATCCCTTCACTTCAAAAGACTAGA...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCCAATATTGCCCAAGTTaGTCAAATTTCTGGCATGTT +
Preference number: 2 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGQYCPS*SNFWHV
Trigger: AACATGCCAGAAATTTGATCAACTTGGGCAATATTG...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCTTGTGTCTAACACACTaGAGACATTGCATAAGGATA +
Preference number: 2 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGLCLTH*RHCIRI
Trigger: TATCCTTATGCAATGTCTTCAGTGTGTTAGACACAA...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACATACATGCCAACAATaGAAACTCTACTTGTGTCTA +
Preference number: 2 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPHTCQQ*KLYLCL
Trigger: TAGACACAAGTAGAGTTTTCATTGTTGGCATGTATG...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp CCATCAGTTCTATACTTCTACTGTGCACTTATAAGCATGATACTAGTTTGTGGTTCTGCTCCTGTCAGATaGCAAGAAAACGGCTTCATT +
Preference number: 2 (lower is better)
Translates to: PSVLYFYCALISMILVCGSAPVR*QENGFI
Trigger: AATGAAGCCGTTTTCTTGTCATCTGACAGGAGCAGA...ACCACAAACTAGTATCATGCTTATAAGTGCACAGTAGAAGTATAGAACTGATGG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR TCA 90 bp CCATCAGTTCTATACTTCTACTGTGCACTTATAAGCATGATACTAGTTTGTGGTTGCGCACCTATTCTCTaGAATGAAGTAAATGGCCGA +
Preference number: 2 (lower is better)
Translates to: PSVLYFYCALISMILVCGCAPIL*NEVNGR
Trigger: TCGGCCATTTACTTCATTTCAGAGAATAGGTGCGCA...ACCACAAACTAGTATCATGCTTATAAGTGCACAGTAGAAGTATAGAACTGATGG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR GCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCAAGAAAAGAATCCCCATaGTTGTTTCCTAAACTCTAC +
Preference number: 2 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPRKESP*LFPKLY
Trigger: GTAGAGTTTAGGAAACAAGCATGGGGATTCTTTTCT...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR GCA 90 bp TTTTCTCCGCTTGTCACTGTGACCAGGTTTCTTTCAAAGCTCGTGAAGATATTAGGGCTTTCAGTCTGCTaGTTAATCAACTACTTATCA +
Preference number: 2 (lower is better)
Translates to: FSPLVTVTRFLSKLVKILGLSVC*LINYLS
Trigger: TGATAAGTAGTTGATTAAGCAGCAGACTGAAAGCCC...TAATATCTTCACGAGCTTTGAAAGAAACCTGGTCACAGTGACAAGCGGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATAGGTTTCTGAATGGATaGGCCAATAGCCAGCCTAAT +
Preference number: 2 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHRFLNG*ANSQPN
Trigger: ATTAGGCTGGCTATTGGCCCATCCATTCAGAAACCT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAGGTTTCTGAATGGATaGGCCAATAGCCAGCCTAAT +
Preference number: 2 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPRFLNG*ANSQPN
Trigger: ATTAGGCTGGCTATTGGCCCATCCATTCAGAAACCT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR CCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATTTGAACTTCATTTGCTaGAACAGTCACAGACTGGTT +
Preference number: 2 (lower is better)
Translates to: SQIALFILRCSHQNPKKDLNFIC*NSHRLV
Trigger: AACCAGTCTGTGACTGTTCCAGCAAATGAAGTTCAA...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCAGCACAGTACTTTAGTTaGTATCTCCAGAAGACTTTT +
Preference number: 2 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPAQYFS*YLQKTF
Trigger: AAAAGTCTTCTGGAGATACCAACTAAAGTACTGTGC...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCATGAATCTATGTAAGTaGGAAATGCTTGAGAAACTG +
Preference number: 2 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSMNLCK*EMLEKL
Trigger: CAGTTTCTCAAGCATTTCCCACTTACATAGATTCAT...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CCA 90 bp TTTTCTCCGCTTGTCACTGTGACCAGGTTTCTTTCAAAGCTCGTGAAGATATTAAAAGGGCAGTTGAAATaGTGCAATAGAAACTTGCAG +
Preference number: 2 (lower is better)
Translates to: FSPLVTVTRFLSKLVKILKGQLK*CNRNLQ
Trigger: CTGCAAGTTTCTATTGCACCATTTCAACTGCCCTTT...TAATATCTTCACGAGCTTTGAAAGAAACCTGGTCACAGTGACAAGCGGAGAAAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR CAA 90 bp TTTGAGAGAATATGTGAGCATACTTTATCCATTGAACTAGGTGGATaGTTGTGGATTTTTACCTCTTCTTCATCCCTGCCTTGGTACATC +
Preference number: 2 (lower is better)
Translates to: FERICEHTLSIELGG*LWIFTSSSSLPWYI
Trigger: GATGTACCAAGGCAGGGATGAAGAAGAGGTAAAAATCCACAACAATCCACCTAGTTCAATGGATAAAGTATGCTCACATATTCTCTCAAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR GCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTAACGCCACTACAGAATaGAATAAGAACATCCGTGCT +
Preference number: 2 (lower is better)
Translates to: FECQSSSFHLFISVLVNINATTE*NKNIRA
Trigger: AGCACGGATGTTCTTATTGCATTCTGTAGTGGCGTT...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGGAGCTCTCCCTTCATaGATAGTTTTTACAAAGCCT +
Preference number: 2 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHGALPS*IVFTKP
Trigger: AGGCTTTGTAAAAACTATCCATGAAGGGAGAGCTCC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTCTGAAACATGGTCAATaGGAGGAGACTAATTTGAGA +
Preference number: 2 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPLKHGQ*EETNLR
Trigger: TCTCAAATTAGTCTCCTCTCATTGACCATGTTTCAG...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGCTTTAGTTACAATGTaGCAAGTGAGATTAGTGACC +
Preference number: 2 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPALVTM*QVRLVT
Trigger: GGTCACTAATCTCACTTGGCACATTGTAACTAAAGC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGCTTTAGTTACAATGTaGCAAGTGAGATTAGTGACC +
Preference number: 2 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHALVTM*QVRLVT
Trigger: GGTCACTAATCTCACTTGGCACATTGTAACTAAAGC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR GCA 90 bp CCATCAGTTCTATACTTCTACTGTGCACTTATAAGCATGATACTAGTTTGTGGTGCAGCTTTGTTGCTTTaGATGATCACCAAGATTGAT +
Preference number: 2 (lower is better)
Translates to: PSVLYFYCALISMILVCGAALLL*MITKID
Trigger: ATCAATCTTGGTGATCATGCAAAGCAACAAAGCTGC...ACCACAAACTAGTATCATGCTTATAAGTGCACAGTAGAAGTATAGAACTGATGG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGACATTACAAGCTATTaGATTCCCATCAAGAAAACC +
Preference number: 2 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPDITSY*IPIKKT
Trigger: GGTTTTCTTGATGGGAATTCAATAGCTTGTAATGTC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR TCA 90 bp ACAGCCACAAGGCAAGAGGGTAATATTTATTTTGATAGCAATATGGATCATCTTCTGAAACATGGTCAATaGGAGGAGACTAATTTGAGA +
Preference number: 2 (lower is better)
Translates to: TATRQEGNIYFDSNMDHLLKHGQ*EETNLR
Trigger: TCTCAAATTAGTCTCCTCTCATTGACCATGTTTCAG...AAGATGATCCATATTGCTATCAAAATAAATATTACCCTCTTGCCTTGTGGCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATACTGACTCTAATGCATaGTGGAATATCTTTGTTGCA +
Preference number: 2 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHTDSNA*WNIFVA
Trigger: TGCAACAAAGATATTCCATCATGCATTAGAGTCAGT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCTTGTTTGCTACATTTaGAAATGTAAACAGCTAGGC +
Preference number: 2 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLVCYI*KCKQLG
Trigger: GCCTAGCTGTTTACATTTGCAAATGTAGCAAACAAG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR GCA 90 bp ACAGCCACAAGGCAAGAGGGTAATATTTATTTTGATAGCAATATGGATCATCTTAATGTAAAACTGGAGTaGAAACGCCACTACAGAATG +
Preference number: 2 (lower is better)
Translates to: TATRQEGNIYFDSNMDHLNVKLE*KRHYRM
Trigger: CATTCTGTAGTGGCGTTTGCACTCCAGTTTTACATT...AAGATGATCCATATTGCTATCAAAATAAATATTACCCTCTTGCCTTGTGGCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR GCA 90 bp ACAGCCACAAGGCAAGAGGGTAATATTTATTTTGATAGCAATATGGATCATCTTCTCTTTATTCTGAGATaGAGCCACCAAAATCCTAAG +
Preference number: 2 (lower is better)
Translates to: TATRQEGNIYFDSNMDHLLFILR*SHQNPK
Trigger: CTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAG...AAGATGATCCATATTGCTATCAAAATAAATATTACCCTCTTGCCTTGTGGCTGT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTTTCTTCCATTGCCCTaGAGATTCATTTTCTTCTCA +
Preference number: 2 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHFLPLP*RFIFFS
Trigger: TGAGAAGAAAATGAATCTCCAGGGCAATGGAAGAAA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTTTCTTCCATTGCCCTaGAGATTCATTTTCTTCTCA +
Preference number: 2 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPFLPLP*RFIFFS
Trigger: TGAGAAGAAAATGAATCTCCAGGGCAATGGAAGAAA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR CAA 90 bp ATGCCAACAATGAAAACTCTACTTGTGTCTAACACACTGAAGACATaGCATAAGGATATCAAAGATGTAATGTGCAATATTGCCCAAGTT +
Preference number: 2 (lower is better)
Translates to: MPTMKTLLVSNTLKT*HKDIKDVMCNIAQV
Trigger: AACTTGGGCAATATTGCACATTACATCTTTGATATCCTTATGCAATGTCTTCAGTGTGTTAGACACAAGTAGAGTTTTCATTGTTGGCAT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp ACAGCCACAAGGCAAGAGGGTAATATTTATTTTGATAGCAATATGGATCATCTTACTGACTCTAATGCATaGTGGAATATCTTTGTTGCA +
Preference number: 2 (lower is better)
Translates to: TATRQEGNIYFDSNMDHLTDSNA*WNIFVA
Trigger: TGCAACAAAGATATTCCATCATGCATTAGAGTCAGT...AAGATGATCCATATTGCTATCAAAATAAATATTACCCTCTTGCCTTGTGGCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR TCA 90 bp ACAGCCACAAGGCAAGAGGGTAATATTTATTTTGATAGCAATATGGATCATCTTATCAGGAAGGTAATTTaGACTTCATTTGCTGGAACA +
Preference number: 2 (lower is better)
Translates to: TATRQEGNIYFDSNMDHLIRKVI*TSFAGT
Trigger: TGTTCCAGCAAATGAAGTTCAAATTACCTTCCTGAT...AAGATGATCCATATTGCTATCAAAATAAATATTACCCTCTTGCCTTGTGGCTGT
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR GCA 90 bp TCATTTCTTGATGGTACAAGGTACTCCCCTCTTCTATATTCAAGGCTTAATTCTAAGATTAATTGTAGATaGACTCTCATTCCCTTGCTA +
Preference number: 2 (lower is better)
Translates to: SFLDGTRYSPLLYSRLNSKINCR*TLIPLL
Trigger: TAGCAAGGGAATGAGAGTGCATCTACAATTAATCTT...AGAATTAAGCCTTGAATATAGAAGAGGGGAGTACCTTGTACCATCAAGAAATGA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAATGAAGGGATTGATTaGTACATATACCAACTGTCA +
Preference number: 2 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPNEGID*YIYQLS
Trigger: TGACAGTTGGTATATGTACCAATCAATCCCTTCATT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATAATGAAGGGATTGATTaGTACATATACCAACTGTCA +
Preference number: 2 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHNEGID*YIYQLS
Trigger: TGACAGTTGGTATATGTACCAATCAATCCCTTCATT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR CCA 72 bp CCAGGCCACAATGCTCTGAGGTGGGCTGGCTCCTTATaGTTTTATATCCCAAACAACAGTACTTTCCTGGGG +
Preference number: 3 (lower is better)
Translates to: PGHNALRWAGSL*FYIPNNSTFLG
Trigger: CCCCAGGAAAGTACTGTTGTTTGGGATATAAAACCATAAGGAGCCAGCCCACCTCAGAGCATTGTGGCCTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR CCA 72 bp CCTCTTCTTCATCCCTGCCTTGGTACATCTCTGCCCTaGCATCTTCCAGAGGGCCCAATGAATCTATGTAAG +
Preference number: 3 (lower is better)
Translates to: PLLHPCLGTSLP*HLPEGPMNLCK
Trigger: CTTACATAGATTCATTGGGCCCTCTGGAAGATGCCAGGGCAGAGATGTACCAAGGCAGGGATGAAGAAGAGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR TCA 72 bp AAATTAGAACAACTCGGAGCCAAGCGGAAATGTCAGTaGTGTGGAAAAGGAAGCCAGGAGGAGGCTCAGGTG +
Preference number: 3 (lower is better)
Translates to: KLEQLGAKRKCQ*CGKGSQEEAQV
Trigger: CACCTGAGCCTCCTCCTGGCTTCCTTTTCCACATCACTGACATTTCCGCTTGGCTCCGAGTTGTTCTAATTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR GCA 72 bp AGGGCACTTCCTTCCAGAATGGACGGACAGTGTATTTaGTATGGCAATAAAGCATCCCCTACTCCACCACCA +
Preference number: 3 (lower is better)
Translates to: RALPSRMDGQCI*YGNKASPTPPP
Trigger: TGGTGGTGGAGTAGGGGATGCTTTATTGCCATAGCAAATACACTGTCCGTCCATTCTGGAAGGAAGTGCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR CCA 72 bp GTAGTGTCTCCCAGGCCACAATGCTCTGAGGTGGGCTaGCTCCTTATGGTTTTATATCCCAAACAACAGTAC +
Preference number: 3 (lower is better)
Translates to: VVSPRPQCSEVG*LLMVLYPKQQY
Trigger: GTACTGTTGTTTGGGATATAAAACCATAAGGAGCCAGCCCACCTCAGAGCATTGTGGCCTGGGAGACACTAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR CCA 72 bp ATACAGGCTCATCTACCTACGGTTCTACAATGGGAGTaGCCTGAGGTGAGCATGTTCCTTGAGGATACAGGA +
Preference number: 3 (lower is better)
Translates to: IQAHLPTVLQWE*PEVSMFLEDTG
Trigger: TCCTGTATCCTCAAGGAACATGCTCACCTCAGGCCACTCCCATTGTAGAACCGTAGGTAGATGAGCCTGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR TCA 72 bp GAGAGAGATGTAGGAAAAGGAAGGACGTGCATGAGTTaGCTCTGGCCCAGTGTTGAAGCCAAAGCTCAGTAT +
Preference number: 3 (lower is better)
Translates to: ERDVGKGRTCMS*LWPSVEAKAQY
Trigger: ATACTGAGCTTTGGCTTCAACACTGGGCCAGAGTCAACTCATGCACGTCCTTCCTTTTCCTACATCTCTCTC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR TCA 72 bp ATCTACCTACGGTTCTACAATGGGAGTGGCCTGAGGTaGGCATGTTCCTTGAGGATACAGGACTGCTTTCTT +
Preference number: 3 (lower is better)
Translates to: IYLRFYNGSGLR*ACSLRIQDCFL
Trigger: AAGAAAGCAGTCCTGTATCCTCAAGGAACATGCTCACCTCAGGCCACTCCCATTGTAGAACCGTAGGTAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR GCA 72 bp GTGGATTGTTGTGGATTTTTACCTCTTCTTCATCCCTaGCTTGGTACATCTCTGCCCTGGCATCTTCCAGAG +
Preference number: 3 (lower is better)
Translates to: VDCCGFLPLLHP*LGTSLPWHLPE
Trigger: CTCTGGAAGATGCCAGGGCAGAGATGTACCAAGGCAGGGATGAAGAAGAGGTAAAAATCCACAACAATCCAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR CCA 72 bp TACATCATACAGGCTCATCTACCTACGGTTCTACAATaGGAGTGGCCTGAGGTGAGCATGTTCCTTGAGGAT +
Preference number: 3 (lower is better)
Translates to: YIIQAHLPTVLQ*EWPEVSMFLED
Trigger: ATCCTCAAGGAACATGCTCACCTCAGGCCACTCCCATTGTAGAACCGTAGGTAGATGAGCCTGTATGATGTA
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR CAA 90 bp CTTAATCAACTACTTATCATTCCAAGTCCTTGGAAGGAGGCAGGAAGGGTGACAGCTCCAAAGGCAGCTTaGTTGCTTTGCATGATCACC +
Preference number: 3 (lower is better)
Translates to: LNQLLIIPSPWKEAGRVTAPKAA*LLCMIT
Trigger: GGTGATCATGCAAAGCAACAAAGCTGCCTTTGGAGC...TGTCACCCTTCCTGCCTCCTTCCAAGGACTTGGAATGATAAGTAGTTGATTAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR TCA 72 bp GTACATCTCTGCCCTGGCATCTTCCAGAGGGCCCAATaGATCTATGTAAGTGGGAAATGCTTGAGAAACTGT +
Preference number: 3 (lower is better)
Translates to: VHLCPGIFQRAQ*IYVSGKCLRNC
Trigger: ACAGTTTCTCAAGCATTTCCCACTTACATAGATTCATTGGGCCCTCTGGAAGATGCCAGGGCAGAGATGTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CAA 90 bp CCAAAATTTTCTCCGCTTGTCACTGTGACCAGGTTTCTTTCAAAGCTCGTGAAGAGGATGCTCTCTGCCTaGAGGGAAATACCTAAACAG +
Preference number: 3 (lower is better)
Translates to: PKFSPLVTVTRFLSKLVKRMLSA*REIPKQ
Trigger: CTGTTTAGGTATTTCCCTCAAGGCAGAGAGCATCCT...CTTCACGAGCTTTGAAAGAAACCTGGTCACAGTGACAAGCGGAGAAAATTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR TCA 72 bp AGCTCCCTGCTCCAAAGGCAGCTTTGTTGCTTTGCATaGTCACCAAGATTGATTAACAAGCCTTCATCACAG +
Preference number: 3 (lower is better)
Translates to: SSLLQRQLCCFA*SPRLINKPSSQ
Trigger: CTGTGATGAAGGCTTGTTAATCAATCTTGGTGATCATGCAAAGCAACAAAGCTGCCTTTGGAGCAGGGAGCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR GCA 72 bp CTGGAGAGAAGCTCACTTCCCAGGTTCCATCCACTCTaGTTCAGAAACTCCAAAGTTAATGTTCTTCCCTAT +
Preference number: 3 (lower is better)
Translates to: LERSSLPRFHPL*FRNSKVNVLPY
Trigger: ATAGGGAAGAACATTAACTTTGGAGTTTCTGAAGCAGAGTGGATGGAACCTGGGAAGTGAGCTTCTCTCCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR CAA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACGTTCTTGTGAACATTaGAGCTATGCCACAGACAGG +
Preference number: 3 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPRSCEH*SYATDR
Trigger: CCTGTCTGTGGCATAGCTCAAATGTTCACAAGAACG...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CAA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTGAAGTGACAAATAACTaGAGAAGAATGGCAGGGTTG +
Preference number: 3 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILEVTNN*RRMAGL
Trigger: CAACCCTGCCATTCTTCTCAAGTTATTTGTCACTTC...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR CCA 72 bp TGGCATCTTCCAGAGGGCCCAATGAATCTATGTAAGTaGGAAATGCTTGAGAAACTGTTGCACTATGATCAG +
Preference number: 3 (lower is better)
Translates to: WHLPEGPMNLCK*EMLEKLLHYDQ
Trigger: CTGATCATAGTGCAACAGTTTCTCAAGCATTTCCCACTTACATAGATTCATTGGGCCCTCTGGAAGATGCCA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR CCA 72 bp GCAGATAATGCAGAGGAAGTGAAAGGGCAGTTGAAATaGTGCAATAGAAACTTGCAGTCAGGGAATTTACGG +
Preference number: 3 (lower is better)
Translates to: ADNAEEVKGQLK*CNRNLQSGNLR
Trigger: CCGTAAATTCCCTGACTGCAAGTTTCTATTGCACCATTTCAACTGCCCTTTCACTTCCTCTGCATTATCTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR CCA 72 bp TATGTTACTATGGTTACTCTAAGTAAACACACAGGCTaGAGAGAAGCTCACTTCCCAGGTTCCATCCACTCT +
Preference number: 3 (lower is better)
Translates to: YVTMVTLSKHTG*REAHFPGSIHS
Trigger: AGAGTGGATGGAACCTGGGAAGTGAGCTTCTCTCCAGCCTGTGTGTTTACTTAGAGTAACCATAGTAACATA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR CAA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTCATCAGGAAGGTAATTaGAACTTCATTTGCTGGAAC +
Preference number: 3 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILHQEGN*NFICWN
Trigger: GTTCCAGCAAATGAAGTTCAAATTACCTTCCTGATG...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CAA 90 bp CTTCCCAGGTTCCATCCACTCTGCTTCAGAAACTCCAAAGTTAATGTTCTTCCCCTACTTTCTGCTCCTTaGGCCTTCATACATACAAAA +
Preference number: 3 (lower is better)
Translates to: LPRFHPLCFRNSKVNVLPLLSAP*AFIHTK
Trigger: TTTTGTATGTATGAAGGCCAAAGGAGCAGAAAGTAG...GGGAAGAACATTAACTTTGGAGTTTCTGAAGCAGAGTGGATGGAACCTGGGAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR TCA 72 bp GATAGTTTTAGATGTAGACAACCTATTGCAGGTTTCTaGATGGATGGGCCAATAGCCAGCCTAATACTGCTG +
Preference number: 3 (lower is better)
Translates to: DSFRCRQPIAGF*MDGPIASLILL
Trigger: CAGCAGTATTAGGCTGGCTATTGGCCCATCCATTCAGAAACCTGCAATAGGTTGTCTACATCTAAAACTATC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR TCA 72 bp TGCTTGAGAAACTGTTGCACTATGATCAGAAACACATaGGAACACTCCGAACTAGCAAGCAACAACCACAAG +
Preference number: 3 (lower is better)
Translates to: CLRNCCTMIRNT*EHSELASNNHK
Trigger: CTTGTGGTTGTTGCTTGCTAGTTCGGAGTGTTCTCATGTGTTTCTGATCATAGTGCAACAGTTTCTCAAGCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CAA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTATTGAACTAGGTGGATaGTTGTGGATTTTTACCTCT +
Preference number: 3 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILIELGG*LWIFTS
Trigger: AGAGGTAAAAATCCACAACAATCCACCTAGTTCAAT...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR TCA 72 bp CTGTCAGTCTGTGGTAACGTAACCTTGCATGCTGCCTaGCCACAAAGTTTGGACATTATATTTAACCAAAAG +
Preference number: 3 (lower is better)
Translates to: LSVCGNVTLHAA*PQSLDIIFNQK
Trigger: CTTTTGGTTAAATATAATGTCCAAACTTTGTGGTCAGGCAGCATGCAAGGTTACGTTACCACAGACTGACAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR TCA 72 bp TGTCGTCTAAACAACAGAGAGAATATATTAACTCTGTaGGCTCCTTCCCGTTCTCATGTACTTAGAGTCGTG +
Preference number: 3 (lower is better)
Translates to: CRLNNRENILTL*APSRSHVLRVV
Trigger: CACGACTCTAAGTACATGAGAACGGGAAGGAGCTCACAGAGTTAATATATTCTCTCTGTTGTTTAGACGACA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR TCA 72 bp CAGTTACTAAACTTTCTCAGCACTGAGGTAAAATGCTaGAGGATGCTCTCTGCCTTGAGGGAAATACCTAAA +
Preference number: 3 (lower is better)
Translates to: QLLNFLSTEVKC*RMLSALREIPK
Trigger: TTTAGGTATTTCCCTCAAGGCAGAGAGCATCCTTCAGCATTTTACCTCAGTGCTGAGAAAGTTTAGTAACTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR GCA 72 bp ATATGTGAACTGCACAAGCCCCTAAGAGCTACTTTCTaGTCCTTTGGCCTTCATACATACAAAATATCACTG +
Preference number: 3 (lower is better)
Translates to: ICELHKPLRATF*SFGLHTYKISL
Trigger: CAGTGATATTTTGTATGTATGAAGGCCAAAGGAGCAGAAAGTAGCTCTTAGGGGCTTGTGCAGTTCACATAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR GCA 72 bp TGCTTTCTTTCTTTCCAAAGTTACTTGGAGAGCATCTaGTCCTGTCAGATGACAAGAAAACGGCTTCATTTC +
Preference number: 3 (lower is better)
Translates to: CFLSFQSYLESI*SCQMTRKRLHF
Trigger: GAAATGAAGCCGTTTTCTTGTCATCTGACAGGAGCAGATGCTCTCCAAGTAACTTTGGAAAGAAAGAAAGCA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR CCA 72 bp GAGCATACTTTATCCATTGAACTAGGTGGATTGTTGTaGATTTTTACCTCTTCTTCATCCCTGCCTTGGTAC +
Preference number: 3 (lower is better)
Translates to: EHTLSIELGGLL*IFTSSSSLPWY
Trigger: GTACCAAGGCAGGGATGAAGAAGAGGTAAAAATCCACAACAATCCACCTAGTTCAATGGATAAAGTATGCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR CCA 72 bp CCACCCAAGTGTACACTATTTATTGTTAAGTGTCAATaGACACCAATACCACATAACACCATCCTCCCTCTT +
Preference number: 3 (lower is better)
Translates to: PPKCTLFIVKCQ*TPIPHNTILPL
Trigger: AAGAGGGAGGATGGTGTTATGTGGTATTGGTGTCCATTGACACTTAACAATAAATAGTGTACACTTGGGTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR CAA 90 bp TTTTCTCCGCTTGTCACTGTGACCAGGTTTCTTTCAAAGCTCGTGAAGATATTAACTGAGAAGGAGGAGTaGTTTTGCGAAGTTTTATCC +
Preference number: 3 (lower is better)
Translates to: FSPLVTVTRFLSKLVKILTEKEE*FCEVLS
Trigger: GGATAAAACTTCGCAAAACAACTCCTCCTTCTCAGT...TAATATCTTCACGAGCTTTGAAAGAAACCTGGTCACAGTGACAAGCGGAGAAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR CCA 72 bp AAGAATGGCAGGGTTGAAATGGCACAGTACTTTAGTTaGTATCTCCAGAAGACTTTTCCAAGAGAGAAAAGT +
Preference number: 3 (lower is better)
Translates to: KNGRVEMAQYFS*YLQKTFPREKS
Trigger: ACTTTTCTCTCTTGGAAAAGTCTTCTGGAGATACCAACTAAAGTACTGTGCCATTTCAACCCTGCCATTCTT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CAA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATAAAAGGAATTTTATGTaGGATAAGGCAGGCTCTATG +
Preference number: 3 (lower is better)
Translates to: SQIALFILRCSHQNPKKDKRNFM*DKAGSM
Trigger: CATAGAGCCTGCCTTATCCAACATAAAATTCCTTTT...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CAA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATCATGATGGAATATCTTaGTTGCATACGTACACTGTA +
Preference number: 3 (lower is better)
Translates to: SQIALFILRCSHQNPKKDHDGIS*LHTYTV
Trigger: TACAGTGTACGTATGCAACAAAGATATTCCATCATG...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CAA 90 bp TTTTCTCCGCTTGTCACTGTGACCAGGTTTCTTTCAAAGCTCGTGAAGATATTATCAGAAGATAAGGCATaGAGGCATTCATTAAAGACT +
Preference number: 3 (lower is better)
Translates to: FSPLVTVTRFLSKLVKILSEDKA*RHSLKT
Trigger: AGTCTTTAATGAATGCCTCAATGCCTTATCTTCTGA...TAATATCTTCACGAGCTTTGAAAGAAACCTGGTCACAGTGACAAGCGGAGAAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR TCA 72 bp AATTATTTAATGTTCAATTATTTAGCCCTATTTCCCTaGGCAGTTATGCCGAGGAGCTCTCCCTTCATGGAT +
Preference number: 3 (lower is better)
Translates to: NYLMFNYLALFP*AVMPRSSPFMD
Trigger: ATCCATGAAGGGAGAGCTCCTCGGCATAACTGCTCAGGGAAATAGGGCTAAATAATTGAACATTAAATAATT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR TCA 72 bp AGATCTTTGACTCCTCTCAGATTGCCCTCTTTATTCTaGGATGCAGCCACCAAAATCCTAAGAAAGATAAAT +
Preference number: 3 (lower is better)
Translates to: RSLTPLRLPSLF*DAATKILRKIN
Trigger: ATTTATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGAGGAGTCAAAGATCT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR TCA 72 bp AAGCCATGGCCTGACATTTGTATTTATCTAGTCTTTTaGAGTGAAGGGATTGCTTTAGTTACAATGTGCCAA +
Preference number: 3 (lower is better)
Translates to: KPWPDICIYLVF*SEGIALVTMCQ
Trigger: TTGGCACATTGTAACTAAAGCAATCCCTTCACTTCAAAAGACTAGATAAATACAAATGTCAGGCCATGGCTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR TCA 72 bp GGATATCAAAGATGTAATGTGCAATATTGCCCAAGTTaGTCAAATTTCTGGCATGTTGTTGAATTGGGCAGT +
Preference number: 3 (lower is better)
Translates to: GYQRCNVQYCPS*SNFWHVVELGS
Trigger: ACTGCCCAATTCAACAACATGCCAGAAATTTGATCAACTTGGGCAATATTGCACATTACATCTTTGATATCC
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR TCA 72 bp TCTTGTAAAAGGTGTGTGCGCACCTATTCTCTGAAATaGAGTAAATGGCCGACTTTAAAACTTCTAAATCAG +
Preference number: 3 (lower is better)
Translates to: SCKRCVRTYSLK*SKWPTLKLLNQ
Trigger: CTGATTTAGAAGTTTTAAAGTCGGCCATTTACTTCATTTCAGAGAATAGGTGCGCACACACCTTTTACAAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAAAAGGAATTTTATGTaGGATAAGGCAGGCTCTATG +
Preference number: 3 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPKRNFM*DKAGSM
Trigger: CATAGAGCCTGCCTTATCCAACATAAAATTCCTTTT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR-3UTR CAA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTGATGGAATATCTTTGTaGCATACGTACACTGTAGAA +
Preference number: 3 (lower is better)
Translates to: FECQSSSFHLFISVLVNIDGISL*HTYTVE
Trigger: TTCTACAGTGTACGTATGCAACAAAGATATTCCATC...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGATGGAATATCTTTGTaGCATACGTACACTGTAGAA +
Preference number: 3 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPDGISL*HTYTVE
Trigger: TTCTACAGTGTACGTATGCAACAAAGATATTCCATC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR GCA 72 bp CTGAAGACATTGCATAAGGATATCAAAGATGTAATGTaGAATATTGCCCAAGTTGATCAAATTTCTGGCATG +
Preference number: 3 (lower is better)
Translates to: LKTLHKDIKDVM*NIAQVDQISGM
Trigger: CATGCCAGAAATTTGATCAACTTGGGCAATATTGCACATTACATCTTTGATATCCTTATGCAATGTCTTCAG
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR GCA 72 bp AAATTTGAAATTCAGTTAAGAAATCAAGCCAAAGATTaGACAATGAACCAAGCTGACCCACTCTTTCCATTC +
Preference number: 3 (lower is better)
Translates to: KFEIQLRNQAKD*TMNQADPLFPF
Trigger: GAATGGAAAGAGTGGGTCAGCTTGGTTCATTGTGCAATCTTTGGCTTGATTTCTTAACTGAATTTCAAATTT
36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR GCA 72 bp AAGCATGATACTAGTTTGTGGTTTTATACAAAGAACTaGATTATTTCTGCCTTTAGTAAACGTGGCCATGAT +
Preference number: 3 (lower is better)
Translates to: KHDTSLWFYTKN*IISAFSKRGHD
Trigger: ATCATGGCCACGTTTACTAAAGGCAGAAATAATGCAGTTCTTTGTATAAAACCACAAACTAGTATCATGCTT
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
3UTR CCA 72 bp TGTGTTGTAAAAACAGAACTATTATACCCCACAGTCTaGTGTTCAAATCAGGACTACAAATTGAATGCTTTT +
Preference number: 3 (lower is better)
Translates to: CVVKTELLYPTV*CSNQDYKLNAF
Trigger: AAAAGCATTCAATTTGTAGTCCTGATTTGAACACCAGACTGTGGGGTATAATAGTTCTGTTTTTACAACACA
35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp TCACAGCCAAGAGGGTTCTTCTCTGACCTAGAGGTCAAAGCCCCAGCAGAGTGGTCTGCTCTTGGGAGCTaGACACAGGCGTCAAGACCC +
Preference number: 4 (lower is better)
Translates to: SQPRGFFSDLEVKAPAEWSALGS*TQASRP
Trigger: GGGTCTTGACGCCTGTGTCCAGCTCCCAAGAGCAGA...CCACTCTGCTGGGGCTTTGACCTCTAGGTCAGAGAAGAACCCTCTTGGCTGTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR GCA 90 bp CAACTACTTATCATTCCAAGTCCTTGGAAGGAGGCAGGAAGGGTGACACACTGGATGCAGACTTCTCGCTaGCAGCAGGAGCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: QLLIIPSPWKEAGRVTHWMQTSR*QQEPLA
Trigger: TGCAAGGGGCTCCTGCTGGCAGCGAGAAGTCTGCAT...CCAGTGTGTCACCCTTCCTGCCTCCTTCCAAGGACTTGGAATGATAAGTAGTTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGCCGCCCGACTGCACTaGTCCGTGCTGCTTGCCATA +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIAARLH*SVLLAI
Trigger: TATGGCAAGCAGCACGGAGCAGTGCAGTCGGGCGGC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CAACTACTTATCATTCCAAGTCCTTGGAAGGAGGCAGGAAGGGTGACACACTGGTCCTGTTCCTGGCAGTaGACTGTGTTGAAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: QLLIIPSPWKEAGRVTHWSCSWQ*TVLKCS
Trigger: GGAGCACTTCAACACAGTTCACTGCCAGGAACAGGA...CCAGTGTGTCACCCTTCCTGCCTCCTTCCAAGGACTTGGAATGATAAGTAGTTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTTAAGGCCGCCCGACTaGACTGCTCCGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHILRPPD*TAPCCL
Trigger: CAAGCAGCACGGAGCAGTGCAGTCGGGCGGCCTTAA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTATGCAGACTTCTCGCTaGCAGCAGGAGCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILMQTSR*QQEPLA
Trigger: TGCAAGGGGCTCCTGCTGGCAGCGAGAAGTCTGCAT...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTCCGCAGCCCGAAAGATaGTGGCGCGGCGGCCAGAGC +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPPQPER*WRGGQS
Trigger: GCTCTGGCCGCCGCGCCACCATCTTTCGGGCTGCGG...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CAACTACTTATCATTCCAAGTCCTTGGAAGGAGGCAGGAAGGGTGACACACTGGGAGTGTCAGCAGCTGTaGAACTGCACTGACGACATT +
Preference number: 4 (lower is better)
Translates to: QLLIIPSPWKEAGRVTHWECQQL*NCTDDI
Trigger: AATGTCGTCAGTGCAGTTTCACAGCTGCTGACACTC...CCAGTGTGTCACCCTTCCTGCCTCCTTCCAAGGACTTGGAATGATAAGTAGTTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTCTAAGGGGCTTCCATTaGCCTGCTCCTCCCCACTTC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHILRGFH*PAPPHF
Trigger: GAAGTGGGGAGGAGCAGGTCAATGGAAGCCCCTTAG...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTATCCAGAGCTTGGCTaGCCAGGACTGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIYPELG*PGLAAE
Trigger: CTCAGCAGCCAGTCCTGGTCAGCCAAGCTCTGGATA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTCTGCTCTTGGGAGCTaGACACAGGCGTCAAGACCC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHISALGS*TQASRP
Trigger: GGGTCTTGACGCCTGTGTCCAGCTCCCAAGAGCAGA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTTTCGATGGGGCTGCCTaGTGGAGAATAGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILFDGAA*WRIVGV
Trigger: CACCCCAACTATTCTCCACCAGGCAGCCCCATCGAA...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 21 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR CAA 72 bp ATTGTTGTGGATTTTTACCTCTTCTTCATCCCTGCCTaGGTACATCTCTGCCCTGGCATCTTCCAGAGGGCC +
Preference number: 4 (lower is better)
Translates to: IVVDFYLFFIPA*VHLCPGIFQRA
Trigger: GGCCCTCTGGAAGATGCCAGGGCAGAGATGTACCAAGGCAGGGATGAAGAAGAGGTAAAAATCCACAACAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCGTTGGCTCCAGGGTTTaGCCCTCGCCTTCACTAGCA +
Preference number: 4 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGVGSRV*PSPSLA
Trigger: TGCTAGTGAAGGCGAGGGTCAAACCCTGGAGCCAAC...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCGGTTGGCCTCCTGTTTaGCATCCGATGCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSGWPPV*HPMLGT
Trigger: AGTCCCAAGCATCGGATGTCAAACAGGAGGCCAACC...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGCTCCTTGCTGTCCCTaGCAGCCTGCTGCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHAPCCP*QPAARQ
Trigger: CTGACGGGCAGCAGGCTGTCAGGGACAGCAAGGAGC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTTCCTGTTCCTGGCAGTaGACTGTGTTGAAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILSCSWQ*TVLKCS
Trigger: GGAGCACTTCAACACAGTTCACTGCCAGGAACAGGA...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCTTGAGCTGCTCAGCCTaGAGTGCCTCTGGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSLSCSA*SASGLR
Trigger: CCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAA...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTTGAGCTGCTCAGCCTaGAGTGCCTCTGGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHILSCSA*SASGLR
Trigger: CCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTACCAGGACTGGCTGCTaGGCAGAATGGCTTTTAGTC +
Preference number: 4 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILTRTGC*AEWLLV
Trigger: GACTAAAAGCCATTCTGCTCAGCAGCCAGTCCTGGT...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCTATCCAGAGCTTGGCTaGCCAGGACTGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGYPELG*PGLAAE
Trigger: CTCAGCAGCCAGTCCTGGTCAGCCAAGCTCTGGATA...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTCTGCTGGGTAAGAGATaGAGACTTCTCGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHILLGKR*RLLAAS
Trigger: GCTGGCAGCGAGAAGTCTGCATCTCTTACCCAGCAG...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTTCCCCACTTCCCCTCTaGTGTTTGTTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILSPLPL*CLLSCS
Trigger: TGAGCAGCTCAACAAACAGCAGAGGGGAAGTGGGGA...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATGGGCTTCCATTGACCTaGTCCTCCCCACTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: SQIALFILRCSHQNPKKDGLPLT*SSPLPL
Trigger: GAGGGGAAGTGGGGAGGAGCAGGTCAATGGAAGCCC...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTCCAAGGTGCTTTTCTaGGCTGCAAAGGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHISKVLF*AAKASG
Trigger: CCCAGAGGCCTTTGCAGCCCAGAAAAGCACCTTGGA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CTTAATCAACTACTTATCATTCCAAGTCCTTGGAAGGAGGCAGGAAGGGTGACAGTCTTTGTCTGCTCTTaGGAGCTGGACACAGGCGTC +
Preference number: 4 (lower is better)
Translates to: LNQLLIIPSPWKEAGRVTVFVCS*ELDTGV
Trigger: GACGCCTGTGTCCAGCTCCCAAGAGCAGACAAAGAC...TGTCACCCTTCCTGCCTCCTTCCAAGGACTTGGAATGATAAGTAGTTGATTAAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR CCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCGGGCAGCTTCAACATTaGGGCTGTCCCTCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSGQLQH*GCPSES
Trigger: AGACTCTGAGGGACAGCCCCAATGTTGAAGCTGCCC...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp CCAAAATTTTCTCCGCTTGTCACTGTGACCAGGTTTCTTTCAAAGCTCGTGAAGGGGCAGCTTCAACATTaGGGCTGTCCCTCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: PKFSPLVTVTRFLSKLVKGQLQH*GCPSES
Trigger: AGACTCTGAGGGACAGCCCCAATGTTGAAGCTGCCC...CTTCACGAGCTTTGAAAGAAACCTGGTCACAGTGACAAGCGGAGAAAATTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTGGATATCCAGAGCTTaGCTGACCAGGACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIWISRA*LTRTGC
Trigger: GCAGCCAGTCCTGGTCAGCCAAGCTCTGGATATCCA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTCAGCCCGAAAGATGGTaGCGCGGCGGCCAGAGCCAT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPQPERW*RGGQSH
Trigger: ATGGCTCTGGCCGCCGCGCCACCATCTTTCGGGCTG...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTGGGTTTACTCAGTCTaGCACCCCCATCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIWVYSV*HPHLKA
Trigger: TGCCTTCAGATGGGGGTGTCAGACTGAGTAAACCCA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp ACAGCCACAAGGCAAGAGGGTAATATTTATTTTGATAGCAATATGGATCATCTTGCTCCTTGCTGTCCCTaGCAGCCTGCTGCCCGTCAG +
Preference number: 4 (lower is better)
Translates to: TATRQEGNIYFDSNMDHLAPCCP*QPAARQ
Trigger: CTGACGGGCAGCAGGCTGTCAGGGACAGCAAGGAGC...AAGATGATCCATATTGCTATCAAAATAAATATTACCCTCTTGCCTTGTGGCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATCTAAGGGGCTTCCATTaGCCTGCTCCTCCCCACTTC +
Preference number: 4 (lower is better)
Translates to: SQIALFILRCSHQNPKKDLRGFH*PAPPHF
Trigger: GAAGTGGGGAGGAGCAGGTCAATGGAAGCCCCTTAG...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCAGATGGCTCTTGGCCATaGGTGCTGTGTTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPDGSWP*VLCSSF
Trigger: GAAGGAGGAACACAGCACGCATGGCCAAGAGCCATC...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTGCCGCCCGACTGCACTaGTCCGTGCTGCTTGCCATA +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNIAARLH*SVLLAI
Trigger: TATGGCAAGCAGCACGGAGCAGTGCAGTCGGGCGGC...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGCCGCCCGACTGCACTaGTCCGTGCTGCTTGCCATA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPAARLH*SVLLAI
Trigger: TATGGCAAGCAGCACGGAGCAGTGCAGTCGGGCGGC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTACCCCAGGAGACAAGTaGAACAGCAACAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHITPGDK*NSNSAQ
Trigger: CTGTGCACTGTTGCTGTTGCACTTGTCTCCTGGGGT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACTGCTGGGTAAGAGATaGAGACTTCTCGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPLLGKR*RLLAAS
Trigger: GCTGGCAGCGAGAAGTCTGCATCTCTTACCCAGCAG...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCCTGCTCAGCCTGAAGTaGCTCTGGGTTAAGGCGCTT +
Preference number: 4 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGLLSLK*LWVKAL
Trigger: AAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAG...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCGCTCAGCATCCTGCCTaGTGCGATTATGCAGTCCTA +
Preference number: 4 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSAQHPA*CDYAVL
Trigger: TAGGACTGCATAATCGCACCAGGCAGGATGCTGAGC...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCAGTCTTTGTCTGCTCTTaGGAGCTGGACACAGGCGTC +
Preference number: 4 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPVFVCS*ELDTGV
Trigger: GACGCCTGTGTCCAGCTCCCAAGAGCAGACAAAGAC...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp TGTGTGTTAAGAAATGCTGCTTTCCGAATTAGCATCTCGCCCAGGAGTTTCCATACTGGGATTCATCCTTaGTCTTGCTCTCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: CVLRNAAFRISISPRSFHTGIHP*SCSLRR
Trigger: CCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGT...ATGGAAACTCCTGGGCGAGATGCTAATTCGGAAAGCAGCATTTCTTAACACACA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR CCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCGATGGGGCTGCCTGGTaGAGAATAGTTGGGGTGTTT +
Preference number: 4 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSDGAAW*RIVGVF
Trigger: AAACACCCCAACTATTCTCCACCAGGCAGCCCCATC...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGGCACCATTTGCAGTTaGCCCAGGTCTGGAATGCTT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIGTICS*PRSGML
Trigger: AAGCATTCCAGACCTGGGCCAACTGCAAATGGTGCC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTCTTCTCACTCAGGCCTaGGATTTGCAAGTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILLLTQA*DLQVLL
Trigger: AAGAAGGACTTGCAAATCTCAGGCCTGAGTGAGAAG...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTCTGACACCCCCATCTaGAGGCACTTGTGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHISDTPI*RHLWVF
Trigger: AAAAACCCACAAGTGCCTTCAGATGGGGGTGTCAGA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGAGTGTCAGCAGCTGTaGAACTGCACTGACGACATT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIECQQL*NCTDDI
Trigger: AATGTCGTCAGTGCAGTTTCACAGCTGCTGACACTC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCCTCAGGCCTGAGATTTaGAAGTCCTTCTTACCGCTG +
Preference number: 4 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSLRPEI*KSFLPL
Trigger: CAGCGGTAAGAAGGACTTGCAAATCTCAGGCCTGAG...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGAAGAGCTGATATCCTaGAGCACGCCAGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIEELIS*STPEST
Trigger: TGTGCTTTCTGGCGTGCTGCAGGATATCAGCTCTTC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTTAAGGCCGCCCGACTaGACTGCTCCGTGCTGCTTG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPLRPPD*TAPCCL
Trigger: CAAGCAGCACGGAGCAGTGCAGTCGGGCGGCCTTAA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTGTAATCTCTCCAAGGTaGTTTTCTGGGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILVISPR*FSGLQR
Trigger: CCTTTGCAGCCCAGAAAAGCACCTTGGAGAGATTAC...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCTGTCCCTGACAGCCTaGTGCCCGTCAGATCCTAGC +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLSLTA*CPSDPS
Trigger: GCTAGGATCTGACGGGCAGCAGGCTGTCAGGGACAG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp AGGACTGCTTTCTTTCTTTCCAAAGTTACTTGGAGAGCATCTGCTCCTGTCAGAGCCCTTGGTATCTACTaGCAAGCCATACATAGGTCG +
Preference number: 4 (lower is better)
Translates to: RTAFFLSKVTWRASAPVRALGIY*QAIHRS
Trigger: CGACCTATGTATGGCTTGGCAGTAGATACCAAGGGC...TCTGACAGGAGCAGATGCTCTCCAAGTAACTTTGGAAAGAAAGAAAGCAGTCCT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR GCA 90 bp TTTTCTCCGCTTGTCACTGTGACCAGGTTTCTTTCAAAGCTCGTGAAGATATTACTGCTGGGTAAGAGATaGAGACTTCTCGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: FSPLVTVTRFLSKLVKILLLGKR*RLLAAS
Trigger: GCTGGCAGCGAGAAGTCTGCATCTCTTACCCAGCAG...TAATATCTTCACGAGCTTTGAAAGAAACCTGGTCACAGTGACAAGCGGAGAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGGGCTTCCATTGACCTaGTCCTCCCCACTTCCCCTC +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHGLPLT*SSPLPL
Trigger: GAGGGGAAGTGGGGAGGAGCAGGTCAATGGAAGCCC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGGCCCAGGTCTGGAATaGTTGATCGCCAAATCTAGA +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIGPGLE*LIAKSR
Trigger: TCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGATGCTGGCATATGCTaGACTGGAAAGGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIDAGIC*TGKVHC
Trigger: ACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTTGTCCGTGCAAAGATaGTGGCATATGCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHILSVQR*WHMLHW
Trigger: CCAGTGCAGCATATGCCAGCATCTTTGCACGGACAA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCGTTGCCTTGGCAATCTaGAGTTTTCCGTCCAATGCC +
Preference number: 4 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSVALAI*SFPSNA
Trigger: GGCATTGGACGGAAAACTCCAGATTGCCAAGGCAAC...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGTTGCCTTGGCAATCTaGAGTTTTCCGTCCAATGCC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIVALAI*SFPSNA
Trigger: GGCATTGGACGGAAAACTCCAGATTGCCAAGGCAAC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTCTTGTCATTCAACTCTaGATTAAGGCCGCCCGACTG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHILVIQL*IKAARL
Trigger: CAGTCGGGCGGCCTTAATCCAGAGTTGAATGACAAG...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTCAGATCCTAGCAGGTaGTTGGCCTCCTGTTTGACA +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHISDPSR*LASCLT
Trigger: TGTCAAACAGGAGGCCAACCACCTGCTAGGATCTGA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTCTCCGTAACAGCGACTaGGATTCATCCTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHILRNSD*DSSLVL
Trigger: CAAGACCAAGGATGAATCCCAGTCGCTGTTACGGAG...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTAGCCTGAAGTGCCTCTaGGTTAAGGCGCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHISLKCL*VKALSC
Trigger: ACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGGCTGCATCCTTTTGTaGATATCCAGAGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIGCILL*ISRAWL
Trigger: CAGCCAAGCTCTGGATATCCACAAAAGGATGCAGCC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTGGCATATGCTGCACTaGAAAGGTCCACTGTCACCA +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIWHMLH*KGPLSP
Trigger: TGGTGACAGTGGACCTTTCCAGTGCAGCATATGCCA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGTTGGCTCCAGGGTTTaGCCCTCGCCTTCACTAGCA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPVGSRV*PSPSLA
Trigger: TGCTAGTGAAGGCGAGGGTCAAACCCTGGAGCCAAC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTCTTCTCACTCAGGCCTaGGATTTGCAAGTCCTTCTT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHILLTQA*DLQVLL
Trigger: AAGAAGGACTTGCAAATCTCAGGCCTGAGTGAGAAG...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCACGGGAGAGACACTTTaGTTTTATTCGGGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSTGETL*FYSGAS
Trigger: AGACGCACCCGAATAAAATCAAAGTGTCTCTCCCGT...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTGTCATCTCCAGCTTTaGCTGTCATTTTGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHICHLQL*LSFCPA
Trigger: GGCAGGACAAAATGACAGTCAAAGCTGGAGATGACA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAGGAATCGAGGGGCTTaGTGGGCACTGAGTAGCCGA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPRNRGA*WALSSR
Trigger: TCGGCTACTCAGTGCCCATCAAGCCCCTCGATTCCT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTCTTAAGGGAGCTGGATaGCTCACAGCTGAAACTACA +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHILKGAG*LTAETT
Trigger: TGTAGTTTCAGCTGTGAGTCATCCAGCTCCCTTAAG...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCAGAGTGTCAGCAGCTGTaGAACTGCACTGACGACATT +
Preference number: 4 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPECQQL*NCTDDI
Trigger: AATGTCGTCAGTGCAGTTTCACAGCTGCTGACACTC...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGCAGACTGTAGACCTTaGGGTCAATTTTGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIADCRP*GQFWAL
Trigger: AAGAGCCCAAAATTGACCTCAAGGTCTACAGTCTGC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CCAAAATTTTCTCCGCTTGTCACTGTGACCAGGTTTCTTTCAAAGCTCGTGAAGCAAGTTTCTCTCTCTTaGCTATGCTCTCGGGAACTG +
Preference number: 4 (lower is better)
Translates to: PKFSPLVTVTRFLSKLVKQVSLS*LCSREL
Trigger: CAGTTCCCGAGAGCATAGTCAAGAGAGAGAAACTTG...CTTCACGAGCTTTGAAAGAAACCTGGTCACAGTGACAAGCGGAGAAAATTTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTCAAGTTTCTCTCTCTTaGCTATGCTCTCGGGAACTG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIQVSLS*LCSREL
Trigger: CAGTTCCCGAGAGCATAGTCAAGAGAGAGAAACTTG...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTCTAAGGGGCTTCCATTaGCCTGCTCCTCCCCACTTC +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPLRGFH*PAPPHF
Trigger: GAAGTGGGGAGGAGCAGGTCAATGGAAGCCCCTTAG...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTATCCAGAGCTTGGCTaGCCAGGACTGGCTGCTGAG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPYPELG*PGLAAE
Trigger: CTCAGCAGCCAGTCCTGGTCAGCCAAGCTCTGGATA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTCCTGAAGTGACCTGTTaGTTAATCGTCAGGAACACC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIPEVTC*LIVRNT
Trigger: GGTGTTCCTGACGATTAATCAACAGGTCACTTCAGG...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGATCTGTGGGGTCATTaGCATAGTAACCGTATCCAC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIDLWGH*HSNRIH
Trigger: GTGGATACGGTTACTATGGCAATGACCCCACAGATC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTACTGTCATTTTGTCCTaGCACTTTCCCACATCCCCA +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHITVILS*HFPTSP
Trigger: TGGGGATGTGGGAAAGTGGCAGGACAAAATGACAGT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTATCCTCTGCTCCCTTaGTGGGGAAGTCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIYPLLP*WGSPSF
Trigger: AAAAGAAGGACTTCCCCAGCAAGGGAGCAGAGGATA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTACCATATTATCCTCTaGTCCCTTGCTGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIYHIIL*SLAGEV
Trigger: GACTTCCCCAGCAAGGGAGCAGAGGATAATATGGTA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGTAATCTCTCCAAGGTaGTTTTCTGGGCTGCAAAGG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIVISPR*FSGLQR
Trigger: CCTTTGCAGCCCAGAAAAGCACCTTGGAGAGATTAC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACTGTTTGACATCCGATaGTTGGGACTCATGCACGGT +
Preference number: 4 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPLFDIR*LGLMHG
Trigger: ACCGTGCATGAGTCCCAAGCATCGGATGTCAAACAG...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTATGCAGACTTCTCGCTaGCAGCAGGAGCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPMQTSR*QQEPLA
Trigger: TGCAAGGGGCTCCTGCTGGCAGCGAGAAGTCTGCAT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATATGCAGACTTCTCGCTaGCAGCAGGAGCCCCTTGCA +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHMQTSR*QQEPLA
Trigger: TGCAAGGGGCTCCTGCTGGCAGCGAGAAGTCTGCAT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCCTGGTAGAGACCACATaGATTGCATACATATCCGCC +
Preference number: 4 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSLVETT*IAYISA
Trigger: GGCGGATATGTATGCAATGCATGTGGTCTCTACCAG...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTCTGGTAGAGACCACATaGATTGCATACATATCCGCC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHILVETT*IAYISA
Trigger: GGCGGATATGTATGCAATGCATGTGGTCTCTACCAG...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCGATGCTGGCATATGCTaGACTGGAAAGGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGDAGIC*TGKVHC
Trigger: ACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATC...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTAAAGATGCTGGCATATaGTGCACTGGAAAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIKDAGI*CTGKVH
Trigger: GTGGACCTTTCCAGTGCAGCATATGCCAGCATCTTT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTGTGCATTGTTCCTATaGAGGCCCCTCTGGATATGT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHICALFL*RPLWIC
Trigger: ACATATCCAGAGGGGCCTGCATAGGAACAATGCACA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCAGTCCTTCTTACCGCTaGAAGATGGCTCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGSPSYR*KMALGH
Trigger: ATGGCCAAGAGCCATCTTCCAGCGGTAAGAAGGACT...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTGCAGCGGAAATACTTaGTGTTGCCTTGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHICSGNT*CCLGNL
Trigger: CAGATTGCCAAGGCAACACCAAGTATTTCCGCTGCA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACTTGTCATTCAACTCTaGATTAAGGCCGCCCGACTG +
Preference number: 4 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPLVIQL*IKAARL
Trigger: CAGTCGGGCGGCCTTAATCCAGAGTTGAATGACAAG...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTAGCCCTTTTCTGGCTTaGTCAATGGCTCTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHISPFLA*SMALLL
Trigger: TAGAAGGAGAGCCATTGACCAAGCCAGAAAAGGGCT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCACTCAAGCCCTTTTCTaGCTTGGTCAATGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGTQALF*LGQWLS
Trigger: GGAGAGCCATTGACCAAGCCAGAAAAGGGCTTGAGT...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCATCAGATCCTAGCAGGTaGTTGGCCTCCTGTTTGACA +
Preference number: 4 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPSDPSR*LASCLT
Trigger: TGTCAAACAGGAGGCCAACCACCTGCTAGGATCTGA...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTCTGCTCTTGGGAGCTaGACACAGGCGTCAAGACCC +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSALGS*TQASRP
Trigger: GGGTCTTGACGCCTGTGTCCAGCTCCCAAGAGCAGA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACTTGCAGGAAGCCCTTaGTATCTACTGCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPLAGSP*YLLPSH
Trigger: ATGGCTTGGCAGTAGATACCAAGGGCTTCCTGCAAG...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTACTCAGGCTCGGAAGTaGAATTTCTCTCGGATGACT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHITQARK*NFSRMT
Trigger: AGTCATCCGAGAGAAATTCCACTTCCGAGCCTGAGT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTATTGGTACTTTTCGATaGGGCTGCCTGGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIIGTFR*GCLVEN
Trigger: ATTCTCCACCAGGCAGCCCCATCGAAAAGTACCAAT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR CAA 72 bp CTAGTGAAGATTAATTGTAGATGCACTCTCATTCCCTaGCTACCCGCACCCCAGTTTCTTCCATCCCTACAA +
Preference number: 4 (lower is better)
Translates to: LVKINCRCTLIP*LPAPQFLPSLQ
Trigger: TTGTAGGGATGGAAGAAACTGGGGTGCGGGTAGCAAGGGAATGAGAGTGCATCTACAATTAATCTTCACTAG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR TCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTTCTGCCTCTGCTCTTTaGGGAGACTTCAAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNISASAL*GDFKGS
Trigger: CGAGCCCTTGAAGTCTCCTCAAAGAGCAGAGGCAGA...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTCTGCCTCTGCTCTTTaGGGAGACTTCAAGGGCTCG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSASAL*GDFKGS
Trigger: CGAGCCCTTGAAGTCTCCTCAAAGAGCAGAGGCAGA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGTGCAGGCCATATCTTaGGGGTCATCTGCCTCTGCT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPVQAIS*GSSASA
Trigger: AGCAGAGGCAGATGACCCTCAAGATATGGCCTGCAC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCAAAGCACAGAACGGTTaGCCTTCTGGAAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGKAQNG*PSGSLW
Trigger: CCAAAGACTTCCAGAAGGTCAACCGTTCTGTGCTTT...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGTTAGAGTTTTTCTCTaGAGGTTTCACACCCTCGGA +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIVRVFL*RFHTLG
Trigger: TCCGAGGGTGTGAAACCTTCAGAGAAAAACTCTAAC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCATGTCATCTCCAGCTTTaGCTGTCATTTTGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPCHLQL*LSFCPA
Trigger: GGCAGGACAAAATGACAGTCAAAGCTGGAGATGACA...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCTGTACCATTTTGTCGTaGGGAATCGAGGGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGCTILS*GIEGLD
Trigger: ATCAAGCCCCTCGATTCCTCACGACAAAATGGTACA...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTTGGCTAGATCATTCTaGTTAATGACAGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHILARSF*LMTEPL
Trigger: CAGGGGCTCTGTCATTAATCAGAATGATCTAGCCAA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGGTTGGCCTCCTGTTTaGCATCCGATGCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHGWPPV*HPMLGT
Trigger: AGTCCCAAGCATCGGATGTCAAACAGGAGGCCAACC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGGTTGGCCTCCTGTTTaGCATCCGATGCTTGGGACT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPGWPPV*HPMLGT
Trigger: AGTCCCAAGCATCGGATGTCAAACAGGAGGCCAACC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTTGAGCTGCTCAGCCTaGAGTGCCTCTGGGTTAAGG +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLSCSA*SASGLR
Trigger: CCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGATGGCTCTTGGCCATaGGTGCTGTGTTCCTCCTTC +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHDGSWP*VLCSSF
Trigger: GAAGGAGGAACACAGCACGCATGGCCAAGAGCCATC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR GCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTCTCTGGAGACAGAGGTaGCGGGTCTGGGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNILWRQR*RVWVVI
Trigger: AATGACAACCCAGACCCGGCACCTCTGTCTCCAGAG...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCTCTGGAGACAGAGGTaGCGGGTCTGGGTTGTCATT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLWRQR*RVWVVI
Trigger: AATGACAACCCAGACCCGGCACCTCTGTCTCCAGAG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR GCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATGAAGGGCCAAGATTTTaGTGTCCAGCTCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: SQIALFILRCSHQNPKKDEGPRF*CPAQHP
Trigger: AGGATGCTGAGCTGGACAGCAAAATCTTGGCCCTTC...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGGACAGAATGGACAGTaGTTAATGGTACACTTGTGG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIGQNGQ*LMVHLW
Trigger: CCACAAGTGTACCATTAAGCACTGTCCATTCTGTCC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATGCCCTTGGTATCTACTaGCAAGCCATACATAGGTCG +
Preference number: 4 (lower is better)
Translates to: SQIALFILRCSHQNPKKDALGIY*QAIHRS
Trigger: CGACCTATGTATGGCTTGGCAGTAGATACCAAGGGC...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTCTGCTGGGTAAGAGATaGAGACTTCTCGCTGCCAGC +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPLLGKR*RLLAAS
Trigger: GCTGGCAGCGAGAAGTCTGCATCTCTTACCCAGCAG...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCTGCTCAGCCTGAAGTaGCTCTGGGTTAAGGCGCTT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLLSLK*LWVKAL
Trigger: AAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTCTGCTCAGCCTGAAGTaGCTCTGGGTTAAGGCGCTT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPLLSLK*LWVKAL
Trigger: AAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAG...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTACTTTTCGATGGGGCTaGCTCTTTCAGAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHITFRWG*LFQNFL
Trigger: AAGGAAGTTCTGAAAGAGGCAGCCCCATCGAAAAGT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTCATCCAGAAAAACAATaGCACAGTGCACACATTTCG +
Preference number: 4 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILHPEKQ*HSAHIS
Trigger: CGAAATGTGTGCACTGTGGCATTGTTTTTCTGGATG...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATTTGTCCGTGCAAAGATaGTGGCATATGCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: SQIALFILRCSHQNPKKDLSVQR*WHMLHW
Trigger: CCAGTGCAGCATATGCCAGCATCTTTGCACGGACAA...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCTTACCGCTGGAAGATaGCTCTTGGCCATGCGTGCT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLTAGR*LLAMRA
Trigger: AGCACGCATGGCCAAGAGCCATCTTCCAGCGGTAAG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTATAATGACGGAGAAGTaGACCCACTACAATCACATC +
Preference number: 4 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILIMTEK*THYNHI
Trigger: GATGTGATTGTAGTGGGTCCACTTCTCCGTCATTAT...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCAGCCTCTGGGACAGAATaGACAGTGCTTAATGGTACA +
Preference number: 4 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPASGTE*TVLNGT
Trigger: TGTACCATTAAGCACTGTCCATTCTGTCCCAGAGGC...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGGCTGCAAAGGCCTCTaGGACAGAATGGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPGCKGL*DRMDSA
Trigger: AGCACTGTCCATTCTGTCCCAGAGGCCTTTGCAGCC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGGCTGCAAAGGCCTCTaGGACAGAATGGACAGTGCT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHGCKGL*DRMDSA
Trigger: AGCACTGTCCATTCTGTCCCAGAGGCCTTTGCAGCC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTCCAAGGTGCTTTTCTaGGCTGCAAAGGCCTCTGGG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSKVLF*AAKASG
Trigger: CCCAGAGGCCTTTGCAGCCCAGAAAAGCACCTTGGA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp ACAGCCACAAGGCAAGAGGGTAATATTTATTTTGATAGCAATATGGATCATCTTTCTGCTCTTGGGAGCTaGACACAGGCGTCAAGACCC +
Preference number: 4 (lower is better)
Translates to: TATRQEGNIYFDSNMDHLSALGS*TQASRP
Trigger: GGGTCTTGACGCCTGTGTCCAGCTCCCAAGAGCAGA...AAGATGATCCATATTGCTATCAAAATAAATATTACCCTCTTGCCTTGTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGTCTTTGTCTGCTCTTaGGAGCTGGACACAGGCGTC +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHVFVCS*ELDTGV
Trigger: GACGCCTGTGTCCAGCTCCCAAGAGCAGACAAAGAC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGTCTTTGTCTGCTCTTaGGAGCTGGACACAGGCGTC +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPVFVCS*ELDTGV
Trigger: GACGCCTGTGTCCAGCTCCCAAGAGCAGACAAAGAC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGGGCAGCTTCAACATTaGGGCTGTCCCTCAGAGTCT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHGQLQH*GCPSES
Trigger: AGACTCTGAGGGACAGCCCCAATGTTGAAGCTGCCC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTTTCTCCGCTTGTCACTGTGACCAGGTTTCTTTCAAAGCTCGTGAAGATATTACTTGCAGGAAGCCCTTaGTATCTACTGCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: FSPLVTVTRFLSKLVKILLAGSP*YLLPSH
Trigger: ATGGCTTGGCAGTAGATACCAAGGGCTTCCTGCAAG...TAATATCTTCACGAGCTTTGAAAGAAACCTGGTCACAGTGACAAGCGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTAGAGAGAGGTCTTTGTaGTCAGGCAATTGGCACAAA +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIRERSL*SGNWHK
Trigger: TTTGTGCCAATTGCCTGACCACAAAGACCTCTCTCT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTGGATATCCAGAGCTTaGCTGACCAGGACTGGCTGC +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHWISRA*LTRTGC
Trigger: GCAGCCAGTCCTGGTCAGCCAAGCTCTGGATATCCA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTCATGTACTTTTCGATaGGGCTGCCTCTTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHISCTFR*GCLFQN
Trigger: GTTCTGAAAGAGGCAGCCCCATCGAAAAGTACATGA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTTCGATGGGGCTGCCTaGTGGAGAATAGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHFDGAA*WRIVGV
Trigger: CACCCCAACTATTCTCCACCAGGCAGCCCCATCGAA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTTCGATGGGGCTGCCTaGTGGAGAATAGTTGGGGTG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPFDGAA*WRIVGV
Trigger: CACCCCAACTATTCTCCACCAGGCAGCCCCATCGAA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTTTCTCCGCTTGTCACTGTGACCAGGTTTCTTTCAAAGCTCGTGAAGATATTAACCCGTAACAGCGACTaGGATTCATCCTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: FSPLVTVTRFLSKLVKILTRNSD*DSSLVL
Trigger: CAAGACCAAGGATGAATCCCAGTCGCTGTTACGGGT...TAATATCTTCACGAGCTTTGAAAGAAACCTGGTCACAGTGACAAGCGGAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTGGGTTTACTCAGTCTaGCACCCCCATCTGAAGGCA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPWVYSV*HPHLKA
Trigger: TGCCTTCAGATGGGGGTGTCAGACTGAGTAAACCCA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTAGTCTTTGGAATGGCTaGACTGCACCATGTTATGAA +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHISLWNG*TAPCYE
Trigger: TTCATAACATGGTGCAGTTCAGCCATTCCAAAGACT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTTATTCGGGTGCGTCTaGAGAAAATGTTGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHILFGCV*RKCCSS
Trigger: ACTAGAGCAACATTTTCTTCAGACGCACCCGAATAA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTTGGATGACTCACAGCTaGAACTACAAAATTTACACC +
Preference number: 4 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILWMTHS*NYKIYT
Trigger: GGTGTAAATTTTGTAGTTTCAGCTGTGAGTCATCCA...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTCCTGTTCCTGGCAGTaGACTGTGTTGAAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSCSWQ*TVLKCS
Trigger: GGAGCACTTCAACACAGTTCACTGCCAGGAACAGGA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTCCTGTTCCTGGCAGTaGACTGTGTTGAAGTGCTCC +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSCSWQ*TVLKCS
Trigger: GGAGCACTTCAACACAGTTCACTGCCAGGAACAGGA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CTTGATGGTACAAGGTACTCCCCTCTTCTATATTCAAGGCTTAATTCTAGGACTGCAGACTGTAGACCTTaGGGTCAATTTTGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LDGTRYSPLLYSRLNSRTADCRP*GQFWAL
Trigger: AAGAGCCCAAAATTGACCTCAAGGTCTACAGTCTGC...AGTCCTAGAATTAAGCCTTGAATATAGAAGAGGGGAGTACCTTGTACCATCAAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATACCAGGACTGGCTGCTaGGCAGAATGGCTTTTAGTC +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHTRTGC*AEWLLV
Trigger: GACTAAAAGCCATTCTGCTCAGCAGCCAGTCCTGGT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTACCAGGACTGGCTGCTaGGCAGAATGGCTTTTAGTC +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPTRTGC*AEWLLV
Trigger: GACTAAAAGCCATTCTGCTCAGCAGCCAGTCCTGGT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATCAGGTCTGGAATGCTTaGTCGCCAAATCTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: SQIALFILRCSHQNPKKDQVWNA*SPNLEE
Trigger: TTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTG...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGTGCACACATTTCGTTaGAAGTTCATCTTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIVHTFR*KFILSA
Trigger: AGCACTCAAGATGAACTTTCAACGAAATGTGTGCAC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAATCCCCTGATGGGGTaGAGGCCATATCTTGAGGGT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPNPLMG*RPYLEG
Trigger: ACCCTCAAGATATGGCCTGCACCCCATCAGGGGATT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTCCAGCTCAGCATCCTaGCTGGTGCGATTATGCAGT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSSSAS*LVRLCS
Trigger: ACTGCATAATCGCACCAGGCAGGATGCTGAGCTGGA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR GCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATTATCCTCTGCTCCCTTaGTGGGGAAGTCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SQIALFILRCSHQNPKKDYPLLP*WGSPSF
Trigger: AAAAGAAGGACTTCCCCAGCAAGGGAGCAGAGGATA...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTACCCCAGGAGACAAGTaGAACAGCAACAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNITPGDK*NSNSAQ
Trigger: CTGTGCACTGTTGCTGTTGCACTTGTCTCCTGGGGT...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATACCCCAGGAGACAAGTaGAACAGCAACAGTGCACAG +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHTPGDK*NSNSAQ
Trigger: CTGTGCACTGTTGCTGTTGCACTTGTCTCCTGGGGT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTACATATCCGCCATTTaGATTCTTTCGCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIYISAI*ILSPER
Trigger: TCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTCCCCACTTCCCCTCTaGTGTTTGTTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSPLPL*CLLSCS
Trigger: TGAGCAGCTCAACAAACAGCAGAGGGGAAGTGGGGA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTCCCCACTTCCCCTCTaGTGTTTGTTGAGCTGCTCA +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSPLPL*CLLSCS
Trigger: TGAGCAGCTCAACAAACAGCAGAGGGGAAGTGGGGA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCAACTTTTCGATGGGGCTaGCTCTTTCAGAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPTFRWG*LFQNFL
Trigger: AAGGAAGTTCTGAAAGAGGCAGCCCCATCGAAAAGT...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCAGTCATATTTGTCCGTaGAAAGATGCTGGCATATGC +
Preference number: 4 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSSHICP*KDAGIC
Trigger: GCATATGCCAGCATCTTTGCACGGACAAATATGACT...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTAGTCATATTTGTCCGTaGAAAGATGCTGGCATATGC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHISHICP*KDAGIC
Trigger: GCATATGCCAGCATCTTTGCACGGACAAATATGACT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTACCAGTAATAACTGGTaGCCTCTGTACCATTTTGTC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHITSNNW*PLYHFV
Trigger: GACAAAATGGTACAGAGGCCACCAGTTATTACTGGT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTTCTGGCTTGGTCAATaGCTCTCCTTCTACACTTTT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIFWLGQ*LSFYTF
Trigger: AAAAGTGTAGAAGGAGAGCCATTGACCAAGCCAGAA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTATCACATCAGGGCCATaGCTTTTGGAATATCTAAAG +
Preference number: 4 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILITSGP*LLEYLK
Trigger: CTTTAGATATTCCAAAAGCCATGGCCCTGATGTGAT...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTACTGGGATTCATCCTTaGTCTTGCTCTCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNITGIHP*SCSLRR
Trigger: CCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGT...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATACTGGGATTCATCCTTaGTCTTGCTCTCTCCGGAGG +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHTGIHP*SCSLRR
Trigger: CCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTTAGTCAATGAACCCTaGGCTTCGTATTTACTCAGG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHILVNEP*ASYLLR
Trigger: CCTGAGTAAATACGAAGCCCAGGGTTCATTGACTAA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCATCATGTACTTTTCGATaGGGCTGCCTCTTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPSCTFR*GCLFQN
Trigger: GTTCTGAAAGAGGCAGCCCCATCGAAAAGTACATGA...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGATGGGGCTGCCTGGTaGAGAATAGTTGGGGTGTTT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHDGAAW*RIVGVF
Trigger: AAACACCCCAACTATTCTCCACCAGGCAGCCCCATC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGGCACCATTTGCAGTTaGCCCAGGTCTGGAATGCTT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHGTICS*PRSGML
Trigger: AAGCATTCCAGACCTGGGCCAACTGCAAATGGTGCC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGGCACCATTTGCAGTTaGCCCAGGTCTGGAATGCTT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPGTICS*PRSGML
Trigger: AAGCATTCCAGACCTGGGCCAACTGCAAATGGTGCC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATCTATGCAGGCCCCTCTaGATATGTGTTGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: SQIALFILRCSHQNPKKDLCRPL*ICVVKS
Trigger: TGACTTCACAACACATATCCAGAGGGGCCTGCATAG...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR CAA 72 bp GAAGTGAAAGGGCAGTTGAAATGGTGCAATAGAAACTaGCAGTCAGGGAATTTACGGGAAGTAAAGGAACTG +
Preference number: 4 (lower is better)
Translates to: EVKGQLKWCNRN*QSGNLREVKEL
Trigger: CAGTTCCTTTACTTCCCGTAAATTCCCTGACTGCAAGTTTCTATTGCACCATTTCAACTGCCCTTTCACTTC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTCTGCAACATCACTCTaGTCTGTATTTTCTGACATC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHISATSL*SVFSDI
Trigger: GATGTCAGAAAATACAGATCAGAGTGATGTTGCAGA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTCTGACACCCCCATCTaGAGGCACTTGTGGGTTTTT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSDTPI*RHLWVF
Trigger: AAAAACCCACAAGTGCCTTCAGATGGGGGTGTCAGA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCTTATGCAGTCCTAAGTaGTACTTTCGGAAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSLCSPK*YFRKCL
Trigger: TAAGCACTTCCGAAAGTATCACTTAGGACTGCATAA...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCAGTCTTTGGAATGGCTaGACTGCACCATGTTATGAA +
Preference number: 4 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGSLWNG*TAPCYE
Trigger: TTCATAACATGGTGCAGTTCAGCCATTCCAAAGACT...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTAATGAAAGTTCCTCCTaGAGTGACCTGTACATCATA +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHINESSS*SDLYII
Trigger: TATGATGTACAGGTCACTTCAGGAGGAACTTTCATT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGAGTGTCAGCAGCTGTaGAACTGCACTGACGACATT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHECQQL*NCTDDI
Trigger: AATGTCGTCAGTGCAGTTTCACAGCTGCTGACACTC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGTTGAAAGTTCATCTTaGGTGCTTCTGTCAACTTTC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIVESSS*VLLSTF
Trigger: GAAAGTTGACAGAAGCACTCAAGATGAACTTTCAAC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCTCTGGATATGTGTTGTaGAGTCATATTTGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGSGYVL*SHICPC
Trigger: GCACGGACAAATATGACTTCACAACACATATCCAGA...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTCTCAGGCCTGAGATTTaGAAGTCCTTCTTACCGCTG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPLRPEI*KSFLPL
Trigger: CAGCGGTAAGAAGGACTTGCAAATCTCAGGCCTGAG...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR GCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTCAGCATCCTGCCTGGTaGGATTATGCAGTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNIQHPAW*DYAVLS
Trigger: ACTTAGGACTGCATAATCGCACCAGGCAGGATGCTG...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCAGCATCCTGCCTGGTaGGATTATGCAGTCCTAAGT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHQHPAW*DYAVLS
Trigger: ACTTAGGACTGCATAATCGCACCAGGCAGGATGCTG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGAAGGGCCAAGATTTTaGTGTCCAGCTCAGCATCCT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHEGPRF*CPAQHP
Trigger: AGGATGCTGAGCTGGACAGCAAAATCTTGGCCCTTC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGAAGAGCTGATATCCTaGAGCACGCCAGAAAGCACA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPEELIS*STPEST
Trigger: TGTGCTTTCTGGCGTGCTGCAGGATATCAGCTCTTC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR GCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATGGACAGAATGGACAGTaGTTAATGGTACACTTGTGG +
Preference number: 4 (lower is better)
Translates to: SQIALFILRCSHQNPKKDGQNGQ*LMVHLW
Trigger: CCACAAGTGTACCATTAAGCACTGTCCATTCTGTCC...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTCTGTTTGACATCCGATaGTTGGGACTCATGCACGGT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPLFDIR*LGLMHG
Trigger: ACCGTGCATGAGTCCCAAGCATCGGATGTCAAACAG...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGCCCTTGGTATCTACTaGCAAGCCATACATAGGTCG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPALGIY*QAIHRS
Trigger: CGACCTATGTATGGCTTGGCAGTAGATACCAAGGGC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTATTCATCCTTGGTCTTaGTCTCTCCGGAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPIHPWS*SLRRQD
Trigger: ATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAAT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CCCAAGTGTACACTATTTATTGTTAAGTGTCAATGGACACCAATACCACATAACATTCATCCTTGGTCTTaGTCTCTCCGGAGGCAGGAT +
Preference number: 4 (lower is better)
Translates to: PKCTLFIVKCQWTPIPHNIHPWS*SLRRQD
Trigger: ATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAAT...GTTATGTGGTATTGGTGTCCATTGACACTTAACAATAAATAGTGTACACTTGGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGGCCCAGGTCTGGAATaGTTGATCGCCAAATCTAGA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPGPGLE*LIAKSR
Trigger: TCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCAAAGTTCATCTTGAGTaGTTCTGTCAACTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSKVHLE*FCQLSP
Trigger: CGGAGAAAGTTGACAGAAGCACTCAAGATGAACTTT...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTAAAGTTCATCTTGAGTaGTTCTGTCAACTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIKVHLE*FCQLSP
Trigger: CGGAGAAAGTTGACAGAAGCACTCAAGATGAACTTT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGATGCTGGCATATGCTaGACTGGAAAGGTCCACTGT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHDAGIC*TGKVHC
Trigger: ACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTTGTCCGTGCAAAGATaGTGGCATATGCTGCACTGG +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLSVQR*WHMLHW
Trigger: CCAGTGCAGCATATGCCAGCATCTTTGCACGGACAA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATAGTCCTTCTTACCGCTaGAAGATGGCTCTTGGCCAT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSPSYR*KMALGH
Trigger: ATGGCCAAGAGCCATCTTCCAGCGGTAAGAAGGACT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGTTGCCTTGGCAATCTaGAGTTTTCCGTCCAATGCC +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPVALAI*SFPSNA
Trigger: GGCATTGGACGGAAAACTCCAGATTGCCAAGGCAAC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTACACCAGTAATAACTaGTGGCCTCTGTACCATTTT +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIYTSNN*WPLYHF
Trigger: AAAATGGTACAGAGGCCACCAGTTATTACTGGTGTA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCTTGTCATTCAACTCTaGATTAAGGCCGCCCGACTG +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLVIQL*IKAARL
Trigger: CAGTCGGGCGGCCTTAATCCAGAGTTGAATGACAAG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTACTCAAGCCCTTTTCTaGCTTGGTCAATGGCTCTCC +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPTQALF*LGQWLS
Trigger: GGAGAGCCATTGACCAAGCCAGAAAAGGGCTTGAGT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTTTGACATCCGATGCTTaGGACTCATGCACGGTCTCA +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNILTSDA*DSCTVS
Trigger: TGAGACCGTGCATGAGTCCCAAGCATCGGATGTCAA...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTTGACATCCGATGCTTaGGACTCATGCACGGTCTCA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPLTSDA*DSCTVS
Trigger: TGAGACCGTGCATGAGTCCCAAGCATCGGATGTCAA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTCAGATCCTAGCAGGTaGTTGGCCTCCTGTTTGACA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSDPSR*LASCLT
Trigger: TGTCAAACAGGAGGCCAACCACCTGCTAGGATCTGA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCTTGCAGGAAGCCCTTaGTATCTACTGCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLAGSP*YLLPSH
Trigger: ATGGCTTGGCAGTAGATACCAAGGGCTTCCTGCAAG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTCTTGCAGGAAGCCCTTaGTATCTACTGCCAAGCCAT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPLAGSP*YLLPSH
Trigger: ATGGCTTGGCAGTAGATACCAAGGGCTTCCTGCAAG...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTCTCCGTAACAGCGACTaGGATTCATCCTTGGTCTTG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPLRNSD*DSSLVL
Trigger: CAAGACCAAGGATGAATCCCAGTCGCTGTTACGGAG...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATAGAGAGAGGTCTTTGTaGTCAGGCAATTGGCACAAA +
Preference number: 4 (lower is better)
Translates to: SQIALFILRCSHQNPKKDRERSL*SGNWHK
Trigger: TTTGTGCCAATTGCCTGACCACAAAGACCTCTCTCT...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAGCCTGAAGTGCCTCTaGGTTAAGGCGCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSLKCL*VKALSC
Trigger: ACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCATTAGTCAATGAACCCTaGGCTTCGTATTTACTCAGG +
Preference number: 4 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPLVNEP*ASYLLR
Trigger: CCTGAGTAAATACGAAGCCCAGGGTTCATTGACTAA...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGGCTGCATCCTTTTGTaGATATCCAGAGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPGCILL*ISRAWL
Trigger: CAGCCAAGCTCTGGATATCCACAAAAGGATGCAGCC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTGGCATATGCTGCACTaGAAAGGTCCACTGTCACCA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPWHMLH*KGPLSP
Trigger: TGGTGACAGTGGACCTTTCCAGTGCAGCATATGCCA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTGGCATATGCTGCACTaGAAAGGTCCACTGTCACCA +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHWHMLH*KGPLSP
Trigger: TGGTGACAGTGGACCTTTCCAGTGCAGCATATGCCA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR CAA 72 bp TGTGAGCATACTTTATCCATTGAACTAGGTGGATTGTaGTGGATTTTTACCTCTTCTTCATCCCTGCCTTGG +
Preference number: 4 (lower is better)
Translates to: CEHTLSIELGGL*WIFTSSSSLPW
Trigger: CCAAGGCAGGGATGAAGAAGAGGTAAAAATCCACAACAATCCACCTAGTTCAATGGATAAAGTATGCTCACA
42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAAAGCACAGAACGGTTaGCCTTCTGGAAGTCTTTGG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPKAQNG*PSGSLW
Trigger: CCAAAGACTTCCAGAAGGTCAACCGTTCTGTGCTTT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTAGTTTCCCATATAAGTaGAATTGCAGAATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHISFPYK*NCRICS
Trigger: GCTGCAAATTCTGCAATTTCACTTATATGGGAAACT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATACGGGAGAGACACTTTaGTTTTATTCGGGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHTGETL*FYSGAS
Trigger: AGACGCACCCGAATAAAATCAAAGTGTCTCTCCCGT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTACGGGAGAGACACTTTaGTTTTATTCGGGTGCGTCT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPTGETL*FYSGAS
Trigger: AGACGCACCCGAATAAAATCAAAGTGTCTCTCCCGT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTGTCATCTCCAGCTTTaGCTGTCATTTTGTCCTGCC +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHCHLQL*LSFCPA
Trigger: GGCAGGACAAAATGACAGTCAAAGCTGGAGATGACA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTGTACCATTTTGTCGTaGGGAATCGAGGGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPCTILS*GIEGLD
Trigger: ATCAAGCCCCTCGATTCCTCACGACAAAATGGTACA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTGTACCATTTTGTCGTaGGGAATCGAGGGGCTTGAT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHCTILS*GIEGLD
Trigger: ATCAAGCCCCTCGATTCCTCACGACAAAATGGTACA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTCTTAAGGGAGCTGGATaGCTCACAGCTGAAACTACA +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNILKGAG*LTAETT
Trigger: TGTAGTTTCAGCTGTGAGTCATCCAGCTCCCTTAAG...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCTTAAGGGAGCTGGATaGCTCACAGCTGAAACTACA +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLKGAG*LTAETT
Trigger: TGTAGTTTCAGCTGTGAGTCATCCAGCTCCCTTAAG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGCAGACTGTAGACCTTaGGGTCAATTTTGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHADCRP*GQFWAL
Trigger: AAGAGCCCAAAATTGACCTCAAGGTCTACAGTCTGC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGCAGACTGTAGACCTTaGGGTCAATTTTGGGCTCTT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPADCRP*GQFWAL
Trigger: AAGAGCCCAAAATTGACCTCAAGGTCTACAGTCTGC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTCAAGTTTCTCTCTCTTaGCTATGCTCTCGGGAACTG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPQVSLS*LCSREL
Trigger: CAGTTCCCGAGAGCATAGTCAAGAGAGAGAAACTTG...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTCAGGTCTGGAATGCTTaGTCGCCAAATCTAGAGGAA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPQVWNA*SPNLEE
Trigger: TTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTG...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAGGGTCATCTGCCTCTaGTCTTTGAGGAGACTTCAA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPRVICL*SLRRLQ
Trigger: TTGAAGTCTCCTCAAAGAGCAGAGGCAGATGACCCT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATATCTTGAGGGTCATCTaGCTCTGCTCTTTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHILRVI*LCSLRR
Trigger: TCTCCTCAAAGAGCAGAGGCAGATGACCCTCAAGAT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTATCTTGAGGGTCATCTaGCTCTGCTCTTTGAGGAGA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPILRVI*LCSLRR
Trigger: TCTCCTCAAAGAGCAGAGGCAGATGACCCTCAAGAT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGATCTGTGGGGTCATTaGCATAGTAACCGTATCCAC +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPDLWGH*HSNRIH
Trigger: GTGGATACGGTTACTATGGCAATGACCCCACAGATC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR GCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTACTGTCATTTTGTCCTaGCACTTTCCCACATCCCCA +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNITVILS*HFPTSP
Trigger: TGGGGATGTGGGAAAGTGGCAGGACAAAATGACAGT...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATACTGTCATTTTGTCCTaGCACTTTCCCACATCCCCA +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHTVILS*HFPTSP
Trigger: TGGGGATGTGGGAAAGTGGCAGGACAAAATGACAGT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTATCCTCTGCTCCCTTaGTGGGGAAGTCCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPYPLLP*WGSPSF
Trigger: AAAAGAAGGACTTCCCCAGCAAGGGAGCAGAGGATA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTACCATATTATCCTCTaGTCCCTTGCTGGGGAAGTC +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPYHIIL*SLAGEV
Trigger: GACTTCCCCAGCAAGGGAGCAGAGGATAATATGGTA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTCGTCTTCTAATAATCTaGTCGCCGTTGTTTTGTTTA +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIRLLII*SPLFCL
Trigger: TAAACAAAACAACGGCGAGCAGATTATTAGAAGACG...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATAAAGATGCTGGCATATaGTGCACTGGAAAGGTCCAC +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHKDAGI*CTGKVH
Trigger: GTGGACCTTTCCAGTGCAGCATATGCCAGCATCTTT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTGTGCATTGTTCCTATaGAGGCCCCTCTGGATATGT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHCALFL*RPLWIC
Trigger: ACATATCCAGAGGGGCCTGCATAGGAACAATGCACA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTGAACGGTTGACCTTCTaGAAGTCTTTGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNIERLTF*KSLEWL
Trigger: CAGCCATTCCAAAGACTTCCAGAAGGTCAACCGTTC...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGAACGGTTGACCTTCTaGAAGTCTTTGGAATGGCTG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPERLTF*KSLEWL
Trigger: CAGCCATTCCAAAGACTTCCAGAAGGTCAACCGTTC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTGCAGCGGAAATACTTaGTGTTGCCTTGGCAATCTG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPCSGNT*CCLGNL
Trigger: CAGATTGCCAAGGCAACACCAAGTATTTCCGCTGCA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATAGCCCTTTTCTGGCTTaGTCAATGGCTCTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSPFLA*SMALLL
Trigger: TAGAAGGAGAGCCATTGACCAAGCCAGAAAAGGGCT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAGCCCTTTTCTGGCTTaGTCAATGGCTCTCCTTCTA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSPFLA*SMALLL
Trigger: TAGAAGGAGAGCCATTGACCAAGCCAGAAAAGGGCT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGCCTCTGGGACAGAATaGACAGTGCTTAATGGTACA +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHASGTE*TVLNGT
Trigger: TGTACCATTAAGCACTGTCCATTCTGTCCCAGAGGC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGCCTCTGGGACAGAATaGACAGTGCTTAATGGTACA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPASGTE*TVLNGT
Trigger: TGTACCATTAAGCACTGTCCATTCTGTCCCAGAGGC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTATCTCTTCTTCCACCTaGGTTATAAAATCGCATTTG +
Preference number: 4 (lower is better)
Translates to: PTVTILTARSTSLTTVHIISSST*VIKSHL
Trigger: CAAATGCGATTTTATAACCCAGGTGGAAGAAGAGAT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp ACAGCCACAAGGCAAGAGGGTAATATTTATTTTGATAGCAATATGGATCATCTTAGCCTGAAGTGCCTCTaGGTTAAGGCGCTTTCTTGT +
Preference number: 4 (lower is better)
Translates to: TATRQEGNIYFDSNMDHLSLKCL*VKALSC
Trigger: ACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCT...AAGATGATCCATATTGCTATCAAAATAAATATTACCCTCTTGCCTTGTGGCTGT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATACTCAGGCTCGGAAGTaGAATTTCTCTCGGATGACT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHTQARK*NFSRMT
Trigger: AGTCATCCGAGAGAAATTCCACTTCCGAGCCTGAGT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATATTGGTACTTTTCGATaGGGCTGCCTGGTGGAGAAT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHIGTFR*GCLVEN
Trigger: ATTCTCCACCAGGCAGCCCCATCGAAAAGTACCAAT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCTATGCAGGCCCCTCTaGATATGTGTTGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLCRPL*ICVVKS
Trigger: TGACTTCACAACACATATCCAGAGGGGCCTGCATAG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTCTATGCAGGCCCCTCTaGATATGTGTTGTGAAGTCA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPLCRPL*ICVVKS
Trigger: TGACTTCACAACACATATCCAGAGGGGCCTGCATAG...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATCTGATCTGTATTTTCTaGCATCTGATCTGCAGACAA +
Preference number: 4 (lower is better)
Translates to: SQIALFILRCSHQNPKKDLICIF*HLICRQ
Trigger: TTGTCTGCAGATCAGATGTCAGAAAATACAGATCAG...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATTCTGCAACATCACTCTaGTCTGTATTTTCTGACATC +
Preference number: 4 (lower is better)
Translates to: SQIALFILRCSHQNPKKDSATSL*SVFSDI
Trigger: GATGTCAGAAAATACAGATCAGAGTGATGTTGCAGA...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCTCAGTGGCCTTTGGTaGCATTTTATGCTCTTCCTT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLSGLW*HFMLFL
Trigger: AAGGAAGAGCATAAAATGTCACCAAAGGCCACTGAG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATAACTGCACCATGTTATaGAGGGCCAAGATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHNCTML*RAKILL
Trigger: CAGCAAAATCTTGGCCCTTCATAACATGGTGCAGTT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGTTAGAGTTTTTCTCTaGAGGTTTCACACCCTCGGA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPVRVFL*RFHTLG
Trigger: TCCGAGGGTGTGAAACCTTCAGAGAAAAACTCTAAC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTTGGCTAGATCATTCTaGTTAATGACAGAGCCCCTG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPLARSF*LMTEPL
Trigger: CAGGGGCTCTGTCATTAATCAGAATGATCTAGCCAA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp ACAGCCACAAGGCAAGAGGGTAATATTTATTTTGATAGCAATATGGATCATCTTCAAGTTTCTCTCTCTTaGCTATGCTCTCGGGAACTG +
Preference number: 4 (lower is better)
Translates to: TATRQEGNIYFDSNMDHLQVSLS*LCSREL
Trigger: CAGTTCCCGAGAGCATAGTCAAGAGAGAGAAACTTG...AAGATGATCCATATTGCTATCAAAATAAATATTACCCTCTTGCCTTGTGGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATGTTGAAAGTTCATCTTaGGTGCTTCTGTCAACTTTC +
Preference number: 4 (lower is better)
Translates to: SQIALFILRCSHQNPKKDVESSS*VLLSTF
Trigger: GAAAGTTGACAGAAGCACTCAAGATGAACTTTCAAC...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGGACAGAATGGACAGTaGTTAATGGTACACTTGTGG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPGQNGQ*LMVHLW
Trigger: CCACAAGTGTACCATTAAGCACTGTCCATTCTGTCC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCCGTCTTCTAATAATCTaGTCGCCGTTGTTTTGTTTA +
Preference number: 4 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGRLLII*SPLFCL
Trigger: TAAACAAAACAACGGCGAGCAGATTATTAGAAGACG...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTACTTTTCGATGGGGCTaGCTCTTTCAGAACTTCCTT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPTFRWG*LFQNFL
Trigger: AAGGAAGTTCTGAAAGAGGCAGCCCCATCGAAAAGT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTCAAACCTTGACAATTaGCTTGACCACTCTGCACTG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSNLDN*LDHSAL
Trigger: CAGTGCAGAGTGGTCAAGCCAATTGTCAAGGTTTGA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTCATGTACTTTTCGATaGGGCTGCCTCTTTCAGAAC +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSCTFR*GCLFQN
Trigger: GTTCTGAAAGAGGCAGCCCCATCGAAAAGTACATGA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR CAA 72 bp ACAGGATGTGCTACCACAGGCTTCCACAAAAAGCTCTaGAAGATAATCACTGTTTTCTCCTCCTTATTAACT +
Preference number: 4 (lower is better)
Translates to: TGCATTGFHKKL*KIITVFSSLLT
Trigger: AGTTAATAAGGAGGAGAAAACAGTGATTATCTTCAAGAGCTTTTTGTGGAAGCCTGTGGTAGCACATCCTGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp ACAGCCACAAGGCAAGAGGGTAATATTTATTTTGATAGCAATATGGATCATCTTAACTGCACCATGTTATaGAGGGCCAAGATTTTGCTG +
Preference number: 4 (lower is better)
Translates to: TATRQEGNIYFDSNMDHLNCTML*RAKILL
Trigger: CAGCAAAATCTTGGCCCTTCATAACATGGTGCAGTT...AAGATGATCCATATTGCTATCAAAATAAATATTACCCTCTTGCCTTGTGGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATAGTTTCCCATATAAGTaGAATTGCAGAATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: SQIALFILRCSHQNPKKDSFPYK*NCRICS
Trigger: GCTGCAAATTCTGCAATTTCACTTATATGGGAAACT...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTTTATTCGGGTGCGTCTaGAGAAAATGTTGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNILFGCV*RKCCSS
Trigger: ACTAGAGCAACATTTTCTTCAGACGCACCCGAATAA...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTTATTCGGGTGCGTCTaGAGAAAATGTTGCTCTAGT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLFGCV*RKCCSS
Trigger: ACTAGAGCAACATTTTCTTCAGACGCACCCGAATAA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTATGGCTTTTAGTCAATaGACCCTGGGCTTCGTATTT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPMAFSQ*TLGFVF
Trigger: AAATACGAAGCCCAGGGTTCATTGACTAAAAGCCAT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGTGCACACATTTCGTTaGAAGTTCATCTTGAGTGCT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHVHTFR*KFILSA
Trigger: AGCACTCAAGATGAACTTTCAACGAAATGTGTGCAC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTCTGGATATGTGTTGTaGAGTCATATTTGTCCGTGC +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSGYVL*SHICPC
Trigger: GCACGGACAAATATGACTTCACAACACATATCCAGA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTTACATATCCGCCATTTaGATTCTTTCGCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNIYISAI*ILSPER
Trigger: TCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTA...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTACATATCCGCCATTTaGATTCTTTCGCCAGAGAGA +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHYISAI*ILSPER
Trigger: TCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATAGAGACCACATGCATTaGATACATATCCGCCATTTG +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHRDHMH*IHIRHL
Trigger: CAAATGGCGGATATGTATGCAATGCATGTGGTCTCT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAGAGACCACATGCATTaGATACATATCCGCCATTTG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPRDHMH*IHIRHL
Trigger: CAAATGGCGGATATGTATGCAATGCATGTGGTCTCT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTTTTACAGTTGGTGGTaGCTTGGTTTTCTCCTTGGA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPFYSWW*LGFLLG
Trigger: TCCAAGGAGAAAACCAAGGCACCACCAACTGTAAAA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCATCCAGAAAAACAATaGCACAGTGCACACATTTCG +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHHPEKQ*HSAHIS
Trigger: CGAAATGTGTGCACTGTGGCATTGTTTTTCTGGATG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTCATCCAGAAAAACAATaGCACAGTGCACACATTTCG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPHPEKQ*HSAHIS
Trigger: CGAAATGTGTGCACTGTGGCATTGTTTTTCTGGATG...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATAGTCATATTTGTCCGTaGAAAGATGCTGGCATATGC +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSHICP*KDAGIC
Trigger: GCATATGCCAGCATCTTTGCACGGACAAATATGACT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTTGGAAGTCTTTGGAATaGCTGAACTGCACCATGTTA +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNIWKSLE*LNCTML
Trigger: TAACATGGTGCAGTTCAGCCATTCCAAAGACTTCCA...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTGGAAGTCTTTGGAATaGCTGAACTGCACCATGTTA +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHWKSLE*LNCTML
Trigger: TAACATGGTGCAGTTCAGCCATTCCAAAGACTTCCA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTTCTGGCTTGGTCAATaGCTCTCCTTCTACACTTTT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPFWLGQ*LSFYTF
Trigger: AAAAGTGTAGAAGGAGAGCCATTGACCAAGCCAGAA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTATAATGACGGAGAAGTaGACCCACTACAATCACATC +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPIMTEK*THYNHI
Trigger: GATGTGATTGTAGTGGGTCCACTTCTCCGTCATTAT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTTAGTCAATGAACCCTaGGCTTCGTATTTACTCAGG +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLVNEP*ASYLLR
Trigger: CCTGAGTAAATACGAAGCCCAGGGTTCATTGACTAA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR CAA 72 bp ATAGAAGTGACAAATAACTTGAGAAGAATGGCAGGGTaGAAATGGCACAGTACTTTAGTTGGTATCTCCAGA +
Preference number: 4 (lower is better)
Translates to: IEVTNNLRRMAG*KWHSTLVGISR
Trigger: TCTGGAGATACCAACTAAAGTACTGTGCCATTTCAACCCTGCCATTCTTCTCAAGTTATTTGTCACTTCTAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
3UTR CAA 72 bp ATATGTGAGCATACTTTATCCATTGAACTAGGTGGATaGTTGTGGATTTTTACCTCTTCTTCATCCCTGCCT +
Preference number: 4 (lower is better)
Translates to: ICEHTLSIELGG*LWIFTSSSSLP
Trigger: AGGCAGGGATGAAGAAGAGGTAAAAATCCACAACAATCCACCTAGTTCAATGGATAAAGTATGCTCACATAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTTATGCAGTCCTAAGTaGTACTTTCGGAAGTGCTTA +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLCSPK*YFRKCL
Trigger: TAAGCACTTCCGAAAGTATCACTTAGGACTGCATAA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTAATGAAAGTTCCTCCTaGAGTGACCTGTACATCATA +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNINESSS*SDLYII
Trigger: TATGATGTACAGGTCACTTCAGGAGGAACTTTCATT...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTGGATGACTCACAGCTaGAACTACAAAATTTACACC +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPWMTHS*NYKIYT
Trigger: GGTGTAAATTTTGTAGTTTCAGCTGTGAGTCATCCA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTGGATGACTCACAGCTaGAACTACAAAATTTACACC +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHWMTHS*NYKIYT
Trigger: GGTGTAAATTTTGTAGTTTCAGCTGTGAGTCATCCA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGTTGAAAGTTCATCTTaGGTGCTTCTGTCAACTTTC +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPVESSS*VLLSTF
Trigger: GAAAGTTGACAGAAGCACTCAAGATGAACTTTCAAC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAAAGTTCATCTTGAGTaGTTCTGTCAACTTTCTCCG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPKVHLE*FCQLSP
Trigger: CGGAGAAAGTTGACAGAAGCACTCAAGATGAACTTT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTACACCAGTAATAACTaGTGGCCTCTGTACCATTTT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHYTSNN*WPLYHF
Trigger: AAAATGGTACAGAGGCCACCAGTTATTACTGGTGTA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp ACAGCCACAAGGCAAGAGGGTAATATTTATTTTGATAGCAATATGGATCATCTTTTCTGGCTTGGTCAATaGCTCTCCTTCTACACTTTT +
Preference number: 4 (lower is better)
Translates to: TATRQEGNIYFDSNMDHLFWLGQ*LSFYTF
Trigger: AAAAGTGTAGAAGGAGAGCCATTGACCAAGCCAGAA...AAGATGATCCATATTGCTATCAAAATAAATATTACCCTCTTGCCTTGTGGCTGT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTATCACATCAGGGCCATaGCTTTTGGAATATCTAAAG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPITSGP*LLEYLK
Trigger: CTTTAGATATTCCAAAAGCCATGGCCCTGATGTGAT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR TCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTGTATTTTCTGACATCTaGTCTGCAGACAATTCTTTG +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNIVFSDI*SADNSL
Trigger: CAAAGAATTGTCTGCAGATCAGATGTCAGAAAATAC...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR TCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGTATTTTCTGACATCTaGTCTGCAGACAATTCTTTG +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHVFSDI*SADNSL
Trigger: CAAAGAATTGTCTGCAGATCAGATGTCAGAAAATAC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR TCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAGTTTCCCATATAAGTaGAATTGCAGAATTTGCAGC +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSFPYK*NCRICS
Trigger: GCTGCAAATTCTGCAATTTCACTTATATGGGAAACT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATAAAACAATGCCACAGTaGACACATTTCGTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHKTMPQ*THFVES
Trigger: ACTTTCAACGAAATGTGTGCACTGTGGCATTGTTTT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR GCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAAAACAATGCCACAGTaGACACATTTCGTTGAAAGT +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPKTMPQ*THFVES
Trigger: ACTTTCAACGAAATGTGTGCACTGTGGCATTGTTTT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAGCAACAGTGCACAGTaGGAACAATTACTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSNSAQ*EQLLFL
Trigger: TAGAAAAAGTAATTGTTCCCACTGTGCACTGTTGCT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATAGCAACAGTGCACAGTaGGAACAATTACTTTTTCTA +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSNSAQ*EQLLFL
Trigger: TAGAAAAAGTAATTGTTCCCACTGTGCACTGTTGCT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATATCTCTTCTTCCACCTaGGTTATAAAATCGCATTTG +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHISSST*VIKSHL
Trigger: CAAATGCGATTTTATAACCCAGGTGGAAGAAGAGAT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTATCTCTTCTTCCACCTaGGTTATAAAATCGCATTTG +
Preference number: 4 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPISSST*VIKSHL
Trigger: CAAATGCGATTTTATAACCCAGGTGGAAGAAGAGAT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CCA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTCAATCAGCTTCACTCTaGAAGTCATTATGTACAAAA +
Preference number: 4 (lower is better)
Translates to: FECQSSSFHLFISVLVNIQSASL*KSLCTK
Trigger: TTTTGTACATAATGACTTCCAGAGTGAAGCTGATTG...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CCA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCAATCAGCTTCACTCTaGAAGTCATTATGTACAAAA +
Preference number: 4 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHQSASL*KSLCTK
Trigger: TTTTGTACATAATGACTTCCAGAGTGAAGCTGATTG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
36% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
3UTR CAA 72 bp GAGCCAGAACTGACTCTAATGCATGATGGAATATCTTaGTTGCATACGTACACTGTAGAAAATAATTATTCA +
Preference number: 4 (lower is better)
Translates to: EPELTLMHDGIS*LHTYTVENNYS
Trigger: TGAATAATTATTTTCTACAGTGTACGTATGCAACAAAGATATTCCATCATGCATTAGAGTCAGTTCTGGCTC
35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS GCA 90 bp CTTGGTCTTGCTCTCTCCGGAGGCAGGATACTGCTGGGTAAGAGATaGAGACTTCTCGCTGCCAGCAGGAGCCCCTTGCAGGAAGCCCTT +
Preference number: 5 (lower is better)
Translates to: LGLALSGGRILLGKR*RLLAASRSPLQEAL
Trigger: AAGGGCTTCCTGCAAGGGGCTCCTGCTGGCAGCGAGAAGTCTGCATCTCTTACCCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 90 bp GGCTCGCAGACTCCCCCAGCAGCGCTGGAAGATGGCTCTTGGCCATaGGTGCTGTGTTCCTCCTTCGAGTTCAACTCTGCAACATCACTC +
Preference number: 5 (lower is better)
Translates to: GSQTPPAALEDGSWP*VLCSSFEFNSATSL
Trigger: GAGTGATGTTGCAGAGTTGAACTCGAAGGAGGAACACAGCACGCATGGCCAAGAGCCATCTTCCAGCGCTGCTGGGGGAGTCTGCGAGCC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184885.8
CDS CCA 90 bp TCCTTGCTGTCCCTGACAGCCTGCTGCCCGTCAGATCCTAGCAGGTaGTTGGCCTCCTGTTTGACATCCGATGCTTGGGACTCATGCACG +
Preference number: 5 (lower is better)
Translates to: SLLSLTACCPSDPSR*LASCLTSDAWDSCT
Trigger: CGTGCATGAGTCCCAAGCATCGGATGTCAAACAGGAGGCCAACCACCTGCTAGGATCTGACGGGCAGCAGGCTGTCAGGGACAGCAAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 90 bp CTCGCTGCCAGCAGGAGCCCCTTGCAGGAAGCCCTTGGTATCTACTaGCAAGCCATACATAGGTCGTGCCAGGTGGGCAGCTTCAACATT +
Preference number: 5 (lower is better)
Translates to: LAASRSPLQEALGIY*QAIHRSCQVGSFNI
Trigger: AATGTTGAAGCTGCCCACCTGGCACGACCTATGTATGGCTTGGCAGTAGATACCAAGGGCTTCCTGCAAGGGGCTCCTGCTGGCAGCGAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 90 bp GACTGGGATTCATCCTTGGTCTTGCTCTCTCCGGAGGCAGGATACTaGTGGGTAAGAGATGCAGACTTCTCGCTGCCAGCAGGAGCCCCT +
Preference number: 5 (lower is better)
Translates to: DWDSSLVLLSPEAGY*WVRDADFSLPAGAP
Trigger: AGGGGCTCCTGCTGGCAGCGAGAAGTCTGCATCTCTTACCCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 90 bp TGGGATTCATCCTTGGTCTTGCTCTCTCCGGAGGCAGGATACTGCTaGGTAAGAGATGCAGACTTCTCGCTGCCAGCAGGAGCCCCTTGC +
Preference number: 5 (lower is better)
Translates to: WDSSLVLLSPEAGYC*VRDADFSLPAGAPC
Trigger: GCAAGGGGCTCCTGCTGGCAGCGAGAAGTCTGCATCTCTTACCCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 90 bp AAATCGCATTTGGTGCACGAGTGCTCCTTGCTGTCCCTGACAGCCTaGTGCCCGTCAGATCCTAGCAGGTGGTTGGCCTCCTGTTTGACA +
Preference number: 5 (lower is better)
Translates to: KSHLVHECSLLSLTA*CPSDPSRWLASCLT
Trigger: TGTCAAACAGGAGGCCAACCACCTGCTAGGATCTGACGGGCAGCAGGCTGTCAGGGACAGCAAGGAGCACTCGTGCACCAAATGCGATTT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 90 bp AGGTGGGCAGCTTCAACATTGGGGCTGTCCCTCAGAGTCTTTGTCTaGTCTTGGGAGCTGGACACAGGCGTCAAGACCCCTAAGCTTGCT +
Preference number: 5 (lower is better)
Translates to: RWAASTLGLSLRVFV*SWELDTGVKTPKLA
Trigger: AGCAAGCTTAGGGGTCTTGACGCCTGTGTCCAGCTCCCAAGAGCAGACAAAGACTCTGAGGGACAGCCCCAATGTTGAAGCTGCCCACCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 90 bp CGCAGACTCCCCCAGCAGCGCTGGAAGATGGCTCTTGGCCATGCGTaGTGTGTTCCTCCTTCGAGTTCAACTCTGCAACATCACTCTGAT +
Preference number: 5 (lower is better)
Translates to: RRLPQQRWKMALGHA*CVPPSSSTLQHHSD
Trigger: ATCAGAGTGATGTTGCAGAGTTGAACTCGAAGGAGGAACACAGCACGCATGGCCAAGAGCCATCTTCCAGCGCTGCTGGGGGAGTCTGCG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184885.8
CDS TCA 90 bp CAGCCTGCTGCCCGTCAGATCCTAGCAGGTGGTTGGCCTCCTGTTTaGCATCCGATGCTTGGGACTCATGCACGGTCTCATAGTGAAAGA +
Preference number: 5 (lower is better)
Translates to: QPAARQILAGGWPPV*HPMLGTHARSHSER
Trigger: TCTTTCACTATGAGACCGTGCATGAGTCCCAAGCATCGGATGTCAAACAGGAGGCCAACCACCTGCTAGGATCTGACGGGCAGCAGGCTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 90 bp TGCTGGGTAAGAGATGCAGACTTCTCGCTGCCAGCAGGAGCCCCTTaGAGGAAGCCCTTGGTATCTACTGCCAAGCCATACATAGGTCGT +
Preference number: 5 (lower is better)
Translates to: CWVRDADFSLPAGAP*RKPLVSTAKPYIGR
Trigger: ACGACCTATGTATGGCTTGGCAGTAGATACCAAGGGCTTCCTGCAAGGGGCTCCTGCTGGCAGCGAGAAGTCTGCATCTCTTACCCAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 90 bp AGGAGCACATCTACATCGGGGGTAGAGAAGGAACACTGGTGGCATTaGTGTTTGACTCTCGAACTTCCGGCCACCCCAGGAGACAAGTGC +
Preference number: 5 (lower is better)
Translates to: RSTSTSGVEKEHWWH*CLTLELPATPGDKC
Trigger: GCACTTGTCTCCTGGGGTGGCCGGAAGTTCGAGAGTCAAACACCAATGCCACCAGTGTTCCTTCTCTACCCCCGATGTAGATGTGCTCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TCACAGCCAAGAGGGTTCTTCTCTGACCTAGAGGTCAAAGCCCCAGCAGAGTGGGACTGGGATTCATCCTaGGTCTTGCTCTCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: SQPRGFFSDLEVKAPAEWDWDSS*VLLSPE
Trigger: CTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTC...CCACTCTGCTGGGGCTTTGACCTCTAGGTCAGAGAAGAACCCTCTTGGCTGTGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS CCA 90 bp CAGCCTTCTCACTCAGGCCTGAGATTTGCAAGTCCTTCTTACCGCTaGAAGATGGCTCTTGGCCATGCGTGCTGTGTTCCTCCTTCGAGT +
Preference number: 5 (lower is better)
Translates to: QPSHSGLRFASPSYR*KMALGHACCVPPSS
Trigger: ACTCGAAGGAGGAACACAGCACGCATGGCCAAGAGCCATCTTCCAGCGGTAAGAAGGACTTGCAAATCTCAGGCCTGAGTGAGAAGGCTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000185183.2
CDS CCA 90 bp CAACATTGGGGCTGTCCCTCAGAGTCTTTGTCTGCTCTTGGGAGCTaGACACAGGCGTCAAGACCCCTAAGCTTGCTTGAGTGTAGGATG +
Preference number: 5 (lower is better)
Translates to: QHWGCPSESLSALGS*TQASRPLSLLECRM
Trigger: CATCCTACACTCAAGCAAGCTTAGGGGTCTTGACGCCTGTGTCCAGCTCCCAAGAGCAGACAAAGACTCTGAGGGACAGCCCCAATGTTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 90 bp AAGCCCTTGGTATCTACTGCCAAGCCATACATAGGTCGTGCCAGGTaGGCAGCTTCAACATTGGGGCTGTCCCTCAGAGTCTTTGTCTGC +
Preference number: 5 (lower is better)
Translates to: KPLVSTAKPYIGRAR*AASTLGLSLRVFVC
Trigger: GCAGACAAAGACTCTGAGGGACAGCCCCAATGTTGAAGCTGCCCACCTGGCACGACCTATGTATGGCTTGGCAGTAGATACCAAGGGCTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 90 bp ATCTCTTCTTCCACCTGGGTTATAAAATCGCATTTGGTGCACGAGTaGTCCTTGCTGTCCCTGACAGCCTGCTGCCCGTCAGATCCTAGC +
Preference number: 5 (lower is better)
Translates to: ISSSTWVIKSHLVHE*SLLSLTACCPSDPS
Trigger: GCTAGGATCTGACGGGCAGCAGGCTGTCAGGGACAGCAAGGAGCACTCGTGCACCAAATGCGATTTTATAACCCAGGTGGAAGAAGAGAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS TCA 90 bp GTGGGAAGGAGACAAGGCTCCCTCCCTTACTGGGGCTTTCATAATTaGAGCCAGCCTTCTCACTCAGGCCTGAGATTTGCAAGTCCTTCT +
Preference number: 5 (lower is better)
Translates to: VGRRQGSLPYWGFHN*SQPSHSGLRFASPS
Trigger: AGAAGGACTTGCAAATCTCAGGCCTGAGTGAGAAGGCTGGCTTCAATTATGAAAGCCCCAGTAAGGGAGGGAGCCTTGTCTCCTTCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000185183.2
CDS GCA 90 bp CTCCCCACTTCCCCTCTGCTGTTTGTTGAGCTGCTCAGCCTGAAGTaGCTCTGGGTTAAGGCGCTTTCTTGTCCGTCTTCTAATAATCTG +
Preference number: 5 (lower is better)
Translates to: LPTSPLLFVELLSLK*LWVKALSCPSSNNL
Trigger: CAGATTATTAGAAGACGGACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAACAAACAGCAGAGGGGAAGTGGGGAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 90 bp AGGCCTGAGATTTGCAAGTCCTTCTTACCGCTGGAAGATGGCTCTTaGCCATGCGTGCTGTGTTCCTCCTTCGAGTTCAACTCTGCAACA +
Preference number: 5 (lower is better)
Translates to: RPEICKSFLPLEDGS*PCVLCSSFEFNSAT
Trigger: TGTTGCAGAGTTGAACTCGAAGGAGGAACACAGCACGCATGGCCAAGAGCCATCTTCCAGCGGTAAGAAGGACTTGCAAATCTCAGGCCT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000185183.2
CDS CCA 90 bp ATTCTGATTAATGACAGAGCCCCTGGGAAGCTTGTCATTCAACTCTaGATTAAGGCCGCCCGACTGCACTGCTCCGTGCTGCTTGCCATA +
Preference number: 5 (lower is better)
Translates to: ILINDRAPGKLVIQL*IKAARLHCSVLLAI
Trigger: TATGGCAAGCAGCACGGAGCAGTGCAGTCGGGCGGCCTTAATCCAGAGTTGAATGACAAGCTTCCCAGGGGCTCTGTCATTAATCAGAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS CCA 90 bp ACTTCCCCTCTGCTGTTTGTTGAGCTGCTCAGCCTGAAGTGCCTCTaGGTTAAGGCGCTTTCTTGTCCGTCTTCTAATAATCTGCTCGCC +
Preference number: 5 (lower is better)
Translates to: TSPLLFVELLSLKCL*VKALSCPSSNNLLA
Trigger: GGCGAGCAGATTATTAGAAGACGGACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAACAAACAGCAGAGGGGAAGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS-3UTR CAA 90 bp AGGACTGCTTTCTTTCTTTCCAAAGTTACTTGGAGAGCATCTGCTCCTGTCAGAGCCAGCAGGAGCCCCTaGCAGGAAGCCCTTGGTATC +
Preference number: 5 (lower is better)
Translates to: RTAFFLSKVTWRASAPVRASRSP*QEALGI
Trigger: GATACCAAGGGCTTCCTGCAAGGGGCTCCTGCTGGC...TCTGACAGGAGCAGATGCTCTCCAAGTAACTTTGGAAAGAAAGAAAGCAGTCCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR CAA 90 bp CAACTACTTATCATTCCAAGTCCTTGGAAGGAGGCAGGAAGGGTGACACACTGGGATTCATCCTTGGTCTaGCTCTCTCCGGAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: QLLIIPSPWKEAGRVTHWDSSLV*LSPEAG
Trigger: TCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATC...CCAGTGTGTCACCCTTCCTGCCTCCTTCCAAGGACTTGGAATGATAAGTAGTTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS TCA 90 bp CTTACTGGGGCTTTCATAATTGAAGCCAGCCTTCTCACTCAGGCCTaGGATTTGCAAGTCCTTCTTACCGCTGGAAGATGGCTCTTGGCC +
Preference number: 5 (lower is better)
Translates to: LTGAFIIEASLLTQA*DLQVLLTAGRWLLA
Trigger: GGCCAAGAGCCATCTTCCAGCGGTAAGAAGGACTTGCAAATCTCAGGCCTGAGTGAGAAGGCTGGCTTCAATTATGAAAGCCCCAGTAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000185183.2
CDS GCA 90 bp GAGATTTGCAAGTCCTTCTTACCGCTGGAAGATGGCTCTTGGCCATaGGTGCTGTGTTCCTCCTTCGAGTTCAACTCTGCAACATCACTC +
Preference number: 5 (lower is better)
Translates to: EICKSFLPLEDGSWP*VLCSSFEFNSATSL
Trigger: GAGTGATGTTGCAGAGTTGAACTCGAAGGAGGAACACAGCACGCATGGCCAAGAGCCATCTTCCAGCGGTAAGAAGGACTTGCAAATCTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000185183.2
CDS-3UTR CAA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCAGCCAGCAGGAGCCCCTaGCAGGAAGCCCTTGGTATC +
Preference number: 5 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPASRSP*QEALGI
Trigger: GATACCAAGGGCTTCCTGCAAGGGGCTCCTGCTGGC...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS TCA 90 bp CTGTCCAGCTCAGCATCCTGCCTGGTGCGATTATGCAGTCCTAAGTaGTACTTTCGGAAGTGCTTAATCAGATCTGTGGGGTCATTGCCA +
Preference number: 5 (lower is better)
Translates to: LSSSASCLVRLCSPK*YFRKCLIRSVGSLP
Trigger: TGGCAATGACCCCACAGATCTGATTAAGCACTTCCGAAAGTATCACTTAGGACTGCATAATCGCACCAGGCAGGATGCTGAGCTGGACAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184885.8
CDS TCA 90 bp TCTCCTTGGAGGCACCATTTGCAGTTGGCCCAGGTCTGGAATGCTTaGTCGCCAAATCTAGAGGAATGTCATTGTCTGATCCAACAGCTG +
Preference number: 5 (lower is better)
Translates to: SPWRHHLQLAQVWNA*SPNLEECHCLIQQL
Trigger: CAGCTGTTGGATCAGACAATGACATTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCCAACTGCAAATGGTGCCTCCAAGGAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 90 bp TTTGCAAGTCCTTCTTACCGCTGGAAGATGGCTCTTGGCCATGCGTaGTGTGTTCCTCCTTCGAGTTCAACTCTGCAACATCACTCTGAT +
Preference number: 5 (lower is better)
Translates to: FASPSYRWKMALGHA*CVPPSSSTLQHHSD
Trigger: ATCAGAGTGATGTTGCAGAGTTGAACTCGAAGGAGGAACACAGCACGCATGGCCAAGAGCCATCTTCCAGCGGTAAGAAGGACTTGCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000185183.2
CDS CCA 90 bp CTCTCCAAGGTGCTTTTCTGGGCTGCAAAGGCCTCTGGGACAGAATaGACAGTGCTTAATGGTACACTTGTGGATGTTATGGAGTTGCTG +
Preference number: 5 (lower is better)
Translates to: LSKVLFWAAKASGTE*TVLNGTLVDVMELL
Trigger: CAGCAACTCCATAACATCCACAAGTGTACCATTAAGCACTGTCCATTCTGTCCCAGAGGCCTTTGCAGCCCAGAAAAGCACCTTGGAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS CCA 90 bp ACCTTGAGGTCAATTTTGGGCTCTTCTTTGATGGTGGGTATGGCATaGCCACCCTCTTCGCCATTAGCAGTAGTGATTTCCTGTTCCTGG +
Preference number: 5 (lower is better)
Translates to: TLRSILGSSLMVGMA*PPSSPLAVVISCSW
Trigger: CCAGGAACAGGAAATCACTACTGCTAATGGCGAAGAGGGTGGCCATGCCATACCCACCATCAAAGAAGAGCCCAAAATTGACCTCAAGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS-3UTR CAA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCTGTTGGCTCCAGGGTTaGACCCTCGCCTTCACTAGC +
Preference number: 5 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSCWLQG*TLAFTS
Trigger: GCTAGTGAAGGCGAGGGTCAAACCCTGGAGCCAACA...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTGTTGGCTCCAGGGTTaGACCCTCGCCTTCACTAGC +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHICWLQG*TLAFTS
Trigger: GCTAGTGAAGGCGAGGGTCAAACCCTGGAGCCAACA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CAA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTAGGCACCATTTGCAGTaGGCCCAGGTCTGGAATGCT +
Preference number: 5 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILRHHLQ*AQVWNA
Trigger: AGCATTCCAGACCTGGGCCAACTGCAAATGGTGCCT...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS TCA 90 bp GTCACTGGCTCGAAGCGCAGGGATGGATTTGTTAGAGTTTTTCTCTaGAGGTTTCACACCCTCGGAGGACGGGAGAGACACTTTGATTTT +
Preference number: 5 (lower is better)
Translates to: VTGSKRRDGFVRVFL*RFHTLGGRERHFDF
Trigger: AAAATCAAAGTGTCTCTCCCGTCCTCCGAGGGTGTGAAACCTTCAGAGAAAAACTCTAACAAATCCATCCCTGCGCTTCGAGCCAGTGAC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 90 bp CCCCTCTGGATATGTGTTGTGAAGTCATATTTGTCCGTGCAAAGATaGTGGCATATGCTGCACTGGAAAGGTCCACTGTCACCATGGCAA +
Preference number: 5 (lower is better)
Translates to: PLWICVVKSYLSVQR*WHMLHWKGPLSPWQ
Trigger: TTGCCATGGTGACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACATATCCAGAGGGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 90 bp AGACAATTCTTTGTTCTTCCCAGATACCTTGCTCTCTGTAGCTGTTaGCTCCAGGGTTTGACCCTCGCCTTCACTAGCAACGTTTCTCAG +
Preference number: 5 (lower is better)
Translates to: RQFFVLPRYLALCSC*LQGLTLAFTSNVSQ
Trigger: CTGAGAAACGTTGCTAGTGAAGGCGAGGGTCAAACCCTGGAGCCAACAGCTACAGAGAGCAAGGTATCTGGGAAGAACAAAGAATTGTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184885.8
ENSMUST00000185183.2
CDS-3UTR CAA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTGCACTTGTGGGTTTTTaGAGGCCACGGAAACTGGAC +
Preference number: 5 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILALVGF*RPRKLD
Trigger: GTCCAGTTTCCGTGGCCTCAAAAAACCCACAAGTGC...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTGGTTGGCCTCCTGTTaGACATCCGATGCTTGGGAC +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHIWLASC*TSDAWD
Trigger: GTCCCAAGCATCGGATGTCAAACAGGAGGCCAACCA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGATCCTAGCAGGTGGTaGGCCTCCTGTTTGACATCC +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHIDPSRW*ASCLTS
Trigger: GGATGTCAAACAGGAGGCCAACCACCTGCTAGGATC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCTGTCCCTCAGAGTCTTaGTCTGCTCTTGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSCPSES*SALGSW
Trigger: CCAGCTCCCAAGAGCAGACAAAGACTCTGAGGGACA...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp TGTGTGTTAAGAAATGCTGCTTTCCGAATTAGCATCTCGCCCAGGAGTTTCCATTGTCCCTCAGAGTCTTaGTCTGCTCTTGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: CVLRNAAFRISISPRSFHCPSES*SALGSW
Trigger: CCAGCTCCCAAGAGCAGACAAAGACTCTGAGGGACA...ATGGAAACTCCTGGGCGAGATGCTAATTCGGAAAGCAGCATTTCTTAACACACA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTGTCCCTCAGAGTCTTaGTCTGCTCTTGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHICPSES*SALGSW
Trigger: CCAGCTCCCAAGAGCAGACAAAGACTCTGAGGGACA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGATTCATCCTTGGTCTaGCTCTCTCCGGAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHIDSSLV*LSPEAG
Trigger: TCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGCCAGAGAGAGGTCTTaGTGGTCAGGCAATTGGCAC +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHIARERS*WSGNWH
Trigger: GTGCCAATTGCCTGACCACAAAGACCTCTCTCTGGC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS TCA 90 bp ATCCTTTTGTGGATATCCAGAGCTTGGCTGACCAGGACTGGCTGCTaGGCAGAATGGCTTTTAGTCAATGAACCCTGGGCTTCGTATTTA +
Preference number: 5 (lower is better)
Translates to: ILLWISRAWLTRTGC*AEWLLVNEPWASYL
Trigger: TAAATACGAAGCCCAGGGTTCATTGACTAAAAGCCATTCTGCTCAGCAGCCAGTCCTGGTCAGCCAAGCTCTGGATATCCACAAAAGGAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS TCA 90 bp CTGCTTGTGCATTGTTCCTATGCAGGCCCCTCTGGATATGTGTTGTaGAGTCATATTTGTCCGTGCAAAGATGCTGGCATATGCTGCACT +
Preference number: 5 (lower is better)
Translates to: LLVHCSYAGPSGYVL*SHICPCKDAGICCT
Trigger: AGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACATATCCAGAGGGGCCTGCATAGGAACAATGCACAAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 90 bp TCTCGAACTTCCGGCCACCCCAGGAGACAAGTGCAACAGCAACAGTaGACAGTGGGAACAATTACTTTTTCTACAAGCAAACGGATAAGT +
Preference number: 5 (lower is better)
Translates to: SRTSGHPRRQVQQQQ*TVGTITFSTSKRIS
Trigger: ACTTATCCGTTTGCTTGTAGAAAAAGTAATTGTTCCCACTGTGCACTGTTGCTGTTGCACTTGTCTCCTGGGGTGGCCGGAAGTTCGAGA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS GCA 90 bp CATTGGTGTTTGACTCTCGAACTTCCGGCCACCCCAGGAGACAAGTaGAACAGCAACAGTGCACAGTGGGAACAATTACTTTTTCTACAA +
Preference number: 5 (lower is better)
Translates to: HWCLTLELPATPGDK*NSNSAQWEQLLFLQ
Trigger: TTGTAGAAAAAGTAATTGTTCCCACTGTGCACTGTTGCTGTTGCACTTGTCTCCTGGGGTGGCCGGAAGTTCGAGAGTCAAACACCAATG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS GCA 90 bp GTTTTCTCCTTGGAGGCACCATTTGCAGTTGGCCCAGGTCTGGAATaGTTGATCGCCAAATCTAGAGGAATGTCATTGTCTGATCCAACA +
Preference number: 5 (lower is better)
Translates to: VFSLEAPFAVGPGLE*LIAKSRGMSLSDPT
Trigger: TGTTGGATCAGACAATGACATTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCCAACTGCAAATGGTGCCTCCAAGGAGAAAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 90 bp CTCTGGATATGTGTTGTGAAGTCATATTTGTCCGTGCAAAGATGCTaGCATATGCTGCACTGGAAAGGTCCACTGTCACCATGGCAACTC +
Preference number: 5 (lower is better)
Translates to: LWICVVKSYLSVQRC*HMLHWKGPLSPWQL
Trigger: GAGTTGCCATGGTGACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACATATCCAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS-3UTR CAA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCAACCTTGACAATTGGCTaGACCACTCTGCACTGGCCC +
Preference number: 5 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPTLTIG*TTLHWP
Trigger: GGGCCAGTGCAGAGTGGTCAAGCCAATTGTCAAGGT...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTTTGACATCCGATGCTaGGGACTCATGCACGGTCTC +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHIFDIRC*GLMHGL
Trigger: GAGACCGTGCATGAGTCCCAAGCATCGGATGTCAAA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCGATCCTAGCAGGTGGTaGGCCTCCTGTTTGACATCC +
Preference number: 5 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGDPSRW*ASCLTS
Trigger: GGATGTCAAACAGGAGGCCAACCACCTGCTAGGATC...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGCCAGCAGGAGCCCCTaGCAGGAAGCCCTTGGTATC +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHASRSP*QEALGI
Trigger: GATACCAAGGGCTTCCTGCAAGGGGCTCCTGCTGGC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGCCAGCAGGAGCCCCTaGCAGGAAGCCCTTGGTATC +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPASRSP*QEALGI
Trigger: GATACCAAGGGCTTCCTGCAAGGGGCTCCTGCTGGC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CGGCCCGTGGGAACCAGAGTTTTAAATAACCCCCTTGGCCACATAATAATACTTGCCTTGGTTTTCTCCTaGGAGGCACCATTTGCAGTT +
Preference number: 5 (lower is better)
Translates to: RPVGTRVLNNPLGHIIILALVFS*EAPFAV
Trigger: AACTGCAAATGGTGCCTCCAAGGAGAAAACCAAGGC...AAGTATTATTATGTGGCCAAGGGGGTTATTTAAAACTCTGGTTCCCACGGGCCG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTACAGTTGGTGGTGCCTaGGTTTTCTCCTTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHITVGGA*VFSLEA
Trigger: TGCCTCCAAGGAGAAAACCAAGGCACCACCAACTGT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS GCA 90 bp AAGTTTCTGGTAGAGACCACATGCATTGCATACATATCCGCCATTTaGATTCTTTCGCCAGAGAGAGGTCTTTGTGGTCAGGCAATTGGC +
Preference number: 5 (lower is better)
Translates to: KFLVETTCIAYISAI*ILSPERGLCGQAIG
Trigger: GCCAATTGCCTGACCACAAAGACCTCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTATGCAATGCATGTGGTCTCTACCAGAAACTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGACGGGAGAGACACTTaGATTTTATTCGGGTGCGTC +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHIDGRDT*ILFGCV
Trigger: GACGCACCCGAATAAAATCAAAGTGTCTCTCCCGTC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCTTATCCTCTGCTCCCTaGCTGGGGAAGTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSLSSAP*LGKSFF
Trigger: AAAGAAGGACTTCCCCAGCAAGGGAGCAGAGGATAA...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATTGGTTGGCCTCCTGTTaGACATCCGATGCTTGGGAC +
Preference number: 5 (lower is better)
Translates to: SQIALFILRCSHQNPKKDWLASC*TSDAWD
Trigger: GTCCCAAGCATCGGATGTCAAACAGGAGGCCAACCA...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTCAAGACCCCTAAGCTaGCTTGAGTGTAGGATGGAC +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHISRPLS*LECRMD
Trigger: GTCCATCCTACACTCAAGCAAGCTTAGGGGTCTTGA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATGCCAGAGAGAGGTCTTaGTGGTCAGGCAATTGGCAC +
Preference number: 5 (lower is better)
Translates to: SQIALFILRCSHQNPKKDARERS*WSGNWH
Trigger: GTGCCAATTGCCTGACCACAAAGACCTCTCTCTGGC...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCCTTGGAGGCACCATTaGCAGTTGGCCCAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHPWRHH*QLAQVW
Trigger: CCAGACCTGGGCCAACTGCAAATGGTGCCTCCAAGG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS GCA 90 bp AGTGCCTCTGGGTTAAGGCGCTTTCTTGTCCGTCTTCTAATAATCTaGTCGCCGTTGTTTTGTTTAATGATGTTTAAAGGCCTGGGAGTC +
Preference number: 5 (lower is better)
Translates to: SASGLRRFLVRLLII*SPLFCLMMFKGLGV
Trigger: GACTCCCAGGCCTTTAAACATCATTAAACAAAACAACGGCGAGCAGATTATTAGAAGACGGACAAGAAAGCGCCTTAACCCAGAGGCACT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 90 bp CATATGCTGCACTGGAAAGGTCCACTGTCACCATGGCAACTCATATaGAAAGCATACATCACTTCATCCAGAAAAACAATGCCACAGTGC +
Preference number: 5 (lower is better)
Translates to: HMLHWKGPLSPWQLI*KAYITSSRKTMPQC
Trigger: GCACTGTGGCATTGTTTTTCTGGATGAAGTGATGTATGCTTTGCATATGAGTTGCCATGGTGACAGTGGACCTTTCCAGTGCAGCATATG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 90 bp GGTACACTTGTGGATGTTATGGAGTTGCTGATAATGACGGAGAAGTaGACCCACTACAATCACATCAGGGCCATGGCTTTTGGAATATCT +
Preference number: 5 (lower is better)
Translates to: GTLVDVMELLIMTEK*THYNHIRAMAFGIS
Trigger: AGATATTCCAAAAGCCATGGCCCTGATGTGATTGTAGTGGGTCCACTTCTCCGTCATTATCAGCAACTCCATAACATCCACAAGTGTACC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS CCA 90 bp TTTTCTACAAGCAAACGGATAAGTAATCTCTCCAAGGTGCTTTTCTaGGCTGCAAAGGCCTCTGGGACAGAATGGACAGTGCTTAATGGT +
Preference number: 5 (lower is better)
Translates to: FSTSKRISNLSKVLF*AAKASGTEWTVLNG
Trigger: ACCATTAAGCACTGTCCATTCTGTCCCAGAGGCCTTTGCAGCCCAGAAAAGCACCTTGGAGAGATTACTTATCCGTTTGCTTGTAGAAAA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTCGGAAATACTTGGTGTaGCCTTGGCAATCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHIRKYLV*PWQSGV
Trigger: AACTCCAGATTGCCAAGGCAACACCAAGTATTTCCG...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCAGACGGGAGAGACACTTaGATTTTATTCGGGTGCGTC +
Preference number: 5 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPDGRDT*ILFGCV
Trigger: GACGCACCCGAATAAAATCAAAGTGTCTCTCCCGTC...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCGCTTTGACTGTCATTTaGTCCTGCCACTTTCCCACA +
Preference number: 5 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSALTVI*SCHFPT
Trigger: TGTGGGAAAGTGGCAGGACAAAATGACAGTCAAAGC...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGCTTTGACTGTCATTTaGTCCTGCCACTTTCCCACA +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHIALTVI*SCHFPT
Trigger: TGTGGGAAAGTGGCAGGACAAAATGACAGTCAAAGC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCGAGCCCCTGGGAAGCTaGTCATTCAACTCTGGATTA +
Preference number: 5 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGEPLGS*SFNSGL
Trigger: TAATCCAGAGTTGAATGACAAGCTTCCCAGGGGCTC...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATTTTGACATCCGATGCTaGGGACTCATGCACGGTCTC +
Preference number: 5 (lower is better)
Translates to: SQIALFILRCSHQNPKKDFDIRC*GLMHGL
Trigger: GAGACCGTGCATGAGTCCCAAGCATCGGATGTCAAA...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCATTTTGGGCTCTTCTTaGATGGTGGGTATGGCATGG +
Preference number: 5 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSILGSS*MVGMAW
Trigger: CCATGCCATACCCACCATCAAAGAAGAGCCCAAAAT...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTATTTTGGGCTCTTCTTaGATGGTGGGTATGGCATGG +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHIILGSS*MVGMAW
Trigger: CCATGCCATACCCACCATCAAAGAAGAGCCCAAAAT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CTTCCCAGGTTCCATCCACTCTGCTTCAGAAACTCCAAAGTTAATGTTCTTCCCTCTTTCAGCCCTTCCTaGTCATCAAGTTTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LPRFHPLCFRNSKVNVLPSFSPS*SSSFSL
Trigger: GAGAGAGAAACTTGATGACAAGGAAGGGCTGAAAGA...GGGAAGAACATTAACTTTGGAGTTTCTGAAGCAGAGTGGATGGAACCTGGGAAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTAAAGGCTGCATCCTTTaGTGGATATCCAGAGCTTGG +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHIKGCIL*WISRAW
Trigger: CCAAGCTCTGGATATCCACAAAAGGATGCAGCCTTT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTAGTTTTGGCAAGGATTaGGTAAGCCAGGCACATGAC +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHISFGKD*VSQAHD
Trigger: GTCATGTGCCTGGCTTACCAAATCCTTGCCAAAACT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp ACAGCCACAAGGCAAGAGGGTAATATTTATTTTGATAGCAATATGGATCATCTTCCTTGGAGGCACCATTaGCAGTTGGCCCAGGTCTGG +
Preference number: 5 (lower is better)
Translates to: TATRQEGNIYFDSNMDHLPWRHH*QLAQVW
Trigger: CCAGACCTGGGCCAACTGCAAATGGTGCCTCCAAGG...AAGATGATCCATATTGCTATCAAAATAAATATTACCCTCTTGCCTTGTGGCTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCTTTTCTGCTTGTGCATaGTTCCTATGCAGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGFSACA*FLCRPL
Trigger: GAGGGGCCTGCATAGGAACAATGCACAAGCAGAAAA...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp ACAGCCACAAGGCAAGAGGGTAATATTTATTTTGATAGCAATATGGATCATCTTGGTGCAGGCCATATCTaGAGGGTCATCTGCCTCTGC +
Preference number: 5 (lower is better)
Translates to: TATRQEGNIYFDSNMDHLGAGHI*RVICLC
Trigger: GCAGAGGCAGATGACCCTCAAGATATGGCCTGCACC...AAGATGATCCATATTGCTATCAAAATAAATATTACCCTCTTGCCTTGTGGCTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATACCTTGACAATTGGCTaGACCACTCTGCACTGGCCC +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHTLTIG*TTLHWP
Trigger: GGGCCAGTGCAGAGTGGTCAAGCCAATTGTCAAGGT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGGTGCCGGGTCTGGGTaGTCATTCACCAGTAAGTCA +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPGAGSG*SFTSKS
Trigger: TGACTTACTGGTGAATGACAACCCAGACCCGGCACC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGGTGCCGGGTCTGGGTaGTCATTCACCAGTAAGTCA +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHGAGSG*SFTSKS
Trigger: TGACTTACTGGTGAATGACAACCCAGACCCGGCACC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CAA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATACCTTCTGGAAGTCTTaGGAATGGCTGAACTGCACC +
Preference number: 5 (lower is better)
Translates to: SQIALFILRCSHQNPKKDTFWKS*EWLNCT
Trigger: GGTGCAGTTCAGCCATTCCAAAGACTTCCAGAAGGT...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCAATACTTGGTGTTGCCTaGGCAATCTGGAGTTTTCCG +
Preference number: 5 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPILGVA*AIWSFP
Trigger: CGGAAAACTCCAGATTGCCAAGGCAACACCAAGTAT...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCGTGTCATCTCCAGCTTaGACTGTCATTTTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGVSSPA*TVILSC
Trigger: GCAGGACAAAATGACAGTCAAAGCTGGAGATGACAC...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTGGTTGGCCTCCTGTTaGACATCCGATGCTTGGGAC +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPWLASC*TSDAWD
Trigger: GTCCCAAGCATCGGATGTCAAACAGGAGGCCAACCA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGATCCTAGCAGGTGGTaGGCCTCCTGTTTGACATCC +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPDPSRW*ASCLTS
Trigger: GGATGTCAAACAGGAGGCCAACCACCTGCTAGGATC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTGTCCCTCAGAGTCTTaGTCTGCTCTTGGGAGCTGG +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPCPSES*SALGSW
Trigger: CCAGCTCCCAAGAGCAGACAAAGACTCTGAGGGACA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGATTCATCCTTGGTCTaGCTCTCTCCGGAGGCAGGA +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHDSSLV*LSPEAG
Trigger: TCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGACTGGGATTCATCCTaGGTCTTGCTCTCTCCGGAG +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPDWDSS*VLLSPE
Trigger: CTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGCCAGAGAGAGGTCTTaGTGGTCAGGCAATTGGCAC +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHARERS*WSGNWH
Trigger: GTGCCAATTGCCTGACCACAAAGACCTCTCTCTGGC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTCTAAGGGGCTTCCATaGACCTGCTCCTCCCCACTT +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSKGLP*TCSSPL
Trigger: AAGTGGGGAGGAGCAGGTCAATGGAAGCCCCTTAGA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTCTAAGGGGCTTCCATaGACCTGCTCCTCCCCACTT +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSKGLP*TCSSPL
Trigger: AAGTGGGGAGGAGCAGGTCAATGGAAGCCCCTTAGA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATCCAGGTCTGGAATGCTaGATCGCCAAATCTAGAGGA +
Preference number: 5 (lower is better)
Translates to: SQIALFILRCSHQNPKKDPGLEC*IAKSRG
Trigger: TCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGG...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAGGCACCATTTGCAGTaGGCCCAGGTCTGGAATGCT +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPRHHLQ*AQVWNA
Trigger: AGCATTCCAGACCTGGGCCAACTGCAAATGGTGCCT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCGTTGTGAAGTCATATTaGTCCGTGCAAAGATGCTGG +
Preference number: 5 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSVVKSY*SVQRCW
Trigger: CCAGCATCTTTGCACGGACAAATATGACTTCACAAC...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTTCTGCAGACAATTCTTaGTTCTTCCCAGATACCTTG +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHISADNS*FFPDTL
Trigger: CAAGGTATCTGGGAAGAACAAAGAATTGTCTGCAGA...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CAA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCAAACTGGACTCAAACCTaGACAATTGGCTTGACCACT +
Preference number: 5 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPNWTQT*TIGLTT
Trigger: AGTGGTCAAGCCAATTGTCAAGGTTTGAGTCCAGTT...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGCACTTGTGGGTTTTTaGAGGCCACGGAAACTGGAC +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHALVGF*RPRKLD
Trigger: GTCCAGTTTCCGTGGCCTCAAAAAACCCACAAGTGC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGTGAAATTGCAGAATTaGCAGCGGAAATACTTGGTG +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHIVKLQN*QRKYLV
Trigger: CACCAAGTATTTCCGCTGCAAATTCTGCAATTTCAC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTGTTGCTCTAGTTCAGTaGAGGAGTTTCCCATATAAG +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHIVALVQ*RSFPYK
Trigger: CTTATATGGGAAACTCCTCAACTGAACTAGAGCAAC...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTAGCGCAGGGATGGATTaGTTAGAGTTTTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHISAGMD*LEFFSE
Trigger: TTCAGAGAAAAACTCTAACAAATCCATCCCTGCGCT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCATCAGGGCCATGGCTTTaGGAATATCTAAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPSGPWL*EYLKSQ
Trigger: CTGTGACTTTAGATATTCCAAAAGCCATGGCCCTGA...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTTTGACATCCGATGCTaGGGACTCATGCACGGTCTC +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPFDIRC*GLMHGL
Trigger: GAGACCGTGCATGAGTCCCAAGCATCGGATGTCAAA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TCTCAGATTGCCCTCTTTATTCTGAGATGCAGCCACCAAAATCCTAAGAAAGATAGTTTTGGCAAGGATTaGGTAAGCCAGGCACATGAC +
Preference number: 5 (lower is better)
Translates to: SQIALFILRCSHQNPKKDSFGKD*VSQAHD
Trigger: GTCATGTGCCTGGCTTACCAAATCCTTGCCAAAACT...ATCTTTCTTAGGATTTTGGTGGCTGCATCTCAGAATAAAGAGGGCAATCTGAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCATCTAGAGGAATGTCATaGTCTGATCCAACAGCTGAG +
Preference number: 5 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPSRGMS*SDPTAE
Trigger: CTCAGCTGTTGGATCAGACAATGACATTCCTCTAGA...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATACAGTTGGTGGTGCCTaGGTTTTCTCCTTGGAGGCA +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHTVGGA*VFSLEA
Trigger: TGCCTCCAAGGAGAAAACCAAGGCACCACCAACTGT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp GTAGCTTCTGTTGCTGCCTGGATGAACGTAGATCCATATAAACCATACCAAAGCAGTGCACACATTTCGTaGAAAGTTCATCTTGAGTGC +
Preference number: 5 (lower is better)
Translates to: VASVAAWMNVDPYKPYQSSAHIS*KVHLEC
Trigger: GCACTCAAGATGAACTTTCAACGAAATGTGTGCACT...GCTTTGGTATGGTTTATATGGATCTACGTTCATCCAGGCAGCAACAGAAGCTAC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp CCAACTGTCACGATTCTTACTGCTCGTTCAACAAGCCTAACCACAGTTCACATTAGTGCACACATTTCGTaGAAAGTTCATCTTGAGTGC +
Preference number: 5 (lower is better)
Translates to: PTVTILTARSTSLTTVHISAHIS*KVHLEC
Trigger: GCACTCAAGATGAACTTTCAACGAAATGTGTGCACT...AATGTGAACTGTGGTTAGGCTTGTTGAACGAGCAGTAAGAATCGTGACAGTTGG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS CCA 90 bp GAGAGCTTATATTTACTCCAGAACCGTAGCCAATCAGCTTCACTCTaGAAGTCATTATGTACAAAAGGAACTCCAAAAAGCGGGTATTGG +
Preference number: 5 (lower is better)
Translates to: ESLYLLQNRSQSASL*KSLCTKGTPKSGYW
Trigger: CCAATACCCGCTTTTTGGAGTTCCTTTTGTACATAATGACTTCCAGAGTGAAGCTGATTGGCTACGGTTCTGGAGTAAATATAAGCTCTC
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS-3UTR CAA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCTCTGCAGACAATTCTTaGTTCTTCCCAGATACCTTG +
Preference number: 5 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGSADNS*FFPDTL
Trigger: CAAGGTATCTGGGAAGAACAAAGAATTGTCTGCAGA...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCTTTCCTCAGTGGCCTTaGGTGACATTTTATGCTCTT +
Preference number: 5 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGFPQWP*VTFYAL
Trigger: AAGAGCATAAAATGTCACCAAAGGCCACTGAGGAAA...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATACCTTCTGGAAGTCTTaGGAATGGCTGAACTGCACC +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHTFWKS*EWLNCT
Trigger: GGTGCAGTTCAGCCATTCCAAAGACTTCCAGAAGGT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGACGGGAGAGACACTTaGATTTTATTCGGGTGCGTC +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPDGRDT*ILFGCV
Trigger: GACGCACCCGAATAAAATCAAAGTGTCTCTCCCGTC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp AGGCAGACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCAAGCGCAGGGATGGATTaGTTAGAGTTTTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: RQTVQKSQDRSLCDVLQPSAGMD*LEFFSE
Trigger: TTCAGAGAAAAACTCTAACAAATCCATCCCTGCGCT...TGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGTCTGCCT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGAGCCCCTGGGAAGCTaGTCATTCAACTCTGGATTA +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHEPLGS*SFNSGL
Trigger: TAATCCAGAGTTGAATGACAAGCTTCCCAGGGGCTC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTTATCCTCTGCTCCCTaGCTGGGGAAGTCCTTCTTT +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPLSSAP*LGKSFF
Trigger: AAAGAAGGACTTCCCCAGCAAGGGAGCAGAGGATAA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp ACAGTACAAAAGTCTCAAGACAGGTCACTTTGTGATGTTTTACAGCCACAAGGCTGCTTAATGGTACACTaGTGGATGTTATGGAGTTGC +
Preference number: 5 (lower is better)
Translates to: TVQKSQDRSLCDVLQPQGCLMVH*WMLWSC
Trigger: GCAACTCCATAACATCCACAAGTGTACCATTAAGCA...GCCTTGTGGCTGTAAAACATCACAAAGTGACCTGTCTTGAGACTTTTGTACTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp TCATTTCTTGATGGTACAAGGTACTCCCCTCTTCTATATTCAAGGCTTAATTCTTCAAGACCCCTAAGCTaGCTTGAGTGTAGGATGGAC +
Preference number: 5 (lower is better)
Translates to: SFLDGTRYSPLLYSRLNSSRPLS*LECRMD
Trigger: GTCCATCCTACACTCAAGCAAGCTTAGGGGTCTTGA...AGAATTAAGCCTTGAATATAGAAGAGGGGAGTACCTTGTACCATCAAGAAATGA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTCAAGACCCCTAAGCTaGCTTGAGTGTAGGATGGAC +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSRPLS*LECRMD
Trigger: GTCCATCCTACACTCAAGCAAGCTTAGGGGTCTTGA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTCCAGGTCTGGAATGCTaGATCGCCAAATCTAGAGGA +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPPGLEC*IAKSRG
Trigger: TCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGG...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGCCTTGGTTTTCTCCTaGGAGGCACCATTTGCAGTT +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHALVFS*EAPFAV
Trigger: AACTGCAAATGGTGCCTCCAAGGAGAAAACCAAGGC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGCCTTGGTTTTCTCCTaGGAGGCACCATTTGCAGTT +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPALVFS*EAPFAV
Trigger: AACTGCAAATGGTGCCTCCAAGGAGAAAACCAAGGC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTTTTCTGCTTGTGCATaGTTCCTATGCAGGCCCCTC +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPFSACA*FLCRPL
Trigger: GAGGGGCCTGCATAGGAACAATGCACAAGCAGAAAA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS TCA 90 bp GAAGAAAATGTTGCTCTAGTTCAGTTGAGGAGTTTCCCATATAAGTaGAATTGCAGAATTTGCAGCGGAAATACTTGGTGTTGCCTTGGC +
Preference number: 5 (lower is better)
Translates to: EENVALVQLRSFPYK*NCRICSGNTWCCLG
Trigger: GCCAAGGCAACACCAAGTATTTCCGCTGCAAATTCTGCAATTTCACTTATATGGGAAACTCCTCAACTGAACTAGAGCAACATTTTCTTC
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS TCA 90 bp CATCACTTCATCCAGAAAAACAATGCCACAGTGCACACATTTCGTTaGAAGTTCATCTTGAGTGCTTCTGTCAACTTTCTCCGTCTTAAC +
Preference number: 5 (lower is better)
Translates to: HHFIQKNNATVHTFR*KFILSASVNFLRLN
Trigger: GTTAAGACGGAGAAAGTTGACAGAAGCACTCAAGATGAACTTTCAACGAAATGTGTGCACTGTGGCATTGTTTTTCTGGATGAAGTGATG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 90 bp GGCAACTCATATGCAAAGCATACATCACTTCATCCAGAAAAACAATaGCACAGTGCACACATTTCGTTGAAAGTTCATCTTGAGTGCTTC +
Preference number: 5 (lower is better)
Translates to: GNSYAKHTSLHPEKQ*HSAHISLKVHLECF
Trigger: GAAGCACTCAAGATGAACTTTCAACGAAATGTGTGCACTGTGGCATTGTTTTTCTGGATGAAGTGATGTATGCTTTGCATATGAGTTGCC
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGAAAGCACAGAACGGTaGACCTTCTGGAAGTCTTTG +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPESTER*TFWKSL
Trigger: CAAAGACTTCCAGAAGGTCAACCGTTCTGTGCTTTC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATATACTTGGTGTTGCCTaGGCAATCTGGAGTTTTCCG +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHILGVA*AIWSFP
Trigger: CGGAAAACTCCAGATTGCCAAGGCAACACCAAGTAT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTATACTTGGTGTTGCCTaGGCAATCTGGAGTTTTCCG +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPILGVA*AIWSFP
Trigger: CGGAAAACTCCAGATTGCCAAGGCAACACCAAGTAT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATCGGAAATACTTGGTGTaGCCTTGGCAATCTGGAGTT +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHRKYLV*PWQSGV
Trigger: AACTCCAGATTGCCAAGGCAACACCAAGTATTTCCG...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTTGCAGCGGAAATACTaGGTGTTGCCTTGGCAATCT +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPLQRKY*VLPWQS
Trigger: AGATTGCCAAGGCAACACCAAGTATTTCCGCTGCAA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTTGCAGCGGAAATACTaGGTGTTGCCTTGGCAATCT +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHLQRKY*VLPWQS
Trigger: AGATTGCCAAGGCAACACCAAGTATTTCCGCTGCAA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGTGTCATCTCCAGCTTaGACTGTCATTTTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPVSSPA*TVILSC
Trigger: GCAGGACAAAATGACAGTCAAAGCTGGAGATGACAC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGTGTCATCTCCAGCTTaGACTGTCATTTTGTCCTGC +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHVSSPA*TVILSC
Trigger: GCAGGACAAAATGACAGTCAAAGCTGGAGATGACAC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATAGTTTTGGCAAGGATTaGGTAAGCCAGGCACATGAC +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSFGKD*VSQAHD
Trigger: GTCATGTGCCTGGCTTACCAAATCCTTGCCAAAACT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS TCA 90 bp AGAAAAACAATGCCACAGTGCACACATTTCGTTGAAAGTTCATCTTaGGTGCTTCTGTCAACTTTCTCCGTCTTAACTACATTCAAGGGA +
Preference number: 5 (lower is better)
Translates to: RKTMPQCTHFVESSS*VLLSTFSVLTTFKG
Trigger: TCCCTTGAATGTAGTTAAGACGGAGAAAGTTGACAGAAGCACTCAAGATGAACTTTCAACGAAATGTGTGCACTGTGGCATTGTTTTTCT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAACTGGACTCAAACCTaGACAATTGGCTTGACCACT +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPNWTQT*TIGLTT
Trigger: AGTGGTCAAGCCAATTGTCAAGGTTTGAGTCCAGTT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATACCAGTAAGTCACCTTaGGGTTTACTCAGTCTGACA +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHTSKSP*GLLSLT
Trigger: TGTCAGACTGAGTAAACCCAAAGGTGACTTACTGGT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CAA 90 bp ACAGCCACAAGGCAAGAGGGTAATATTTATTTTGATAGCAATATGGATCATCTTTTGCAGCGGAAATACTaGGTGTTGCCTTGGCAATCT +
Preference number: 5 (lower is better)
Translates to: TATRQEGNIYFDSNMDHLLQRKY*VLPWQS
Trigger: AGATTGCCAAGGCAACACCAAGTATTTCCGCTGCAA...AAGATGATCCATATTGCTATCAAAATAAATATTACCCTCTTGCCTTGTGGCTGT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTCAGGGCCATGGCTTTaGGAATATCTAAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSGPWL*EYLKSQ
Trigger: CTGTGACTTTAGATATTCCAAAAGCCATGGCCCTGA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTCAGGGCCATGGCTTTaGGAATATCTAAAGTCACAG +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSGPWL*EYLKSQ
Trigger: CTGTGACTTTAGATATTCCAAAAGCCATGGCCCTGA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGTGGATGTTATGGAGTaGCTGATAATGACGGAGAAG +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPVDVME*LIMTEK
Trigger: CTTCTCCGTCATTATCAGCAACTCCATAACATCCAC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGTGGATGTTATGGAGTaGCTGATAATGACGGAGAAG +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHVDVME*LIMTEK
Trigger: CTTCTCCGTCATTATCAGCAACTCCATAACATCCAC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp ACTGTGACCAGGTTTCTTTCAAAGCTCGTGAAGATATTACAGATCAAAAATTTGATTTTGGGCTCTTCTTaGATGGTGGGTATGGCATGG +
Preference number: 5 (lower is better)
Translates to: TVTRFLSKLVKILQIKNLILGSS*MVGMAW
Trigger: CCATGCCATACCCACCATCAAAGAAGAGCCCAAAAT...CAAATTTTTGATCTGTAATATCTTCACGAGCTTTGAAAGAAACCTGGTCACAGT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTCTTTCAGCCCTTCCTaGTCATCAAGTTTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSFSPS*SSSFSL
Trigger: GAGAGAGAAACTTGATGACAAGGAAGGGCTGAAAGA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTCTTTCAGCCCTTCCTaGTCATCAAGTTTCTCTCTC +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSFSPS*SSSFSL
Trigger: GAGAGAGAAACTTGATGACAAGGAAGGGCTGAAAGA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTATACATATCCGCCATTaGCATTCTTTCGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPIHIRH*HSFARE
Trigger: CTCTCTGGCGAAAGAATGCAAATGGCGGATATGTAT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATATACATATCCGCCATTaGCATTCTTTCGCCAGAGAG +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHIHIRH*HSFARE
Trigger: CTCTCTGGCGAAAGAATGCAAATGGCGGATATGTAT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTCTAGAGGAATGTCATaGTCTGATCCAACAGCTGAG +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHSRGMS*SDPTAE
Trigger: CTCAGCTGTTGGATCAGACAATGACATTCCTCTAGA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGTTGTGAAGTCATATTaGTCCGTGCAAAGATGCTGG +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPVVKSY*SVQRCW
Trigger: CCAGCATCTTTGCACGGACAAATATGACTTCACAAC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGTTGTGAAGTCATATTaGTCCGTGCAAAGATGCTGG +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHVVKSY*SVQRCW
Trigger: CCAGCATCTTTGCACGGACAAATATGACTTCACAAC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTTTCCTCAGTGGCCTTaGGTGACATTTTATGCTCTT +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPFPQWP*VTFYAL
Trigger: AAGAGCATAAAATGTCACCAAAGGCCACTGAGGAAA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
CDS-3UTR CAA 90 bp TTTGAATGTCAAAGCTCCTCATTCCACCTCTTTATTTCCGTTCTTGTGAACATTGTGAAATTGCAGAATTaGCAGCGGAAATACTTGGTG +
Preference number: 5 (lower is better)
Translates to: FECQSSSFHLFISVLVNIVKLQN*QRKYLV
Trigger: CACCAAGTATTTCCGCTGCAAATTCTGCAATTTCAC...AATGTTCACAAGAACGGAAATAAAGAGGTGGAATGAGGAGCTTTGACATTCAAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATGTGAAATTGCAGAATTaGCAGCGGAAATACTTGGTG +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHVKLQN*QRKYLV
Trigger: CACCAAGTATTTCCGCTGCAAATTCTGCAATTTCAC...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTGTTGCTCTAGTTCAGTaGAGGAGTTTCCCATATAAG +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPVALVQ*RSFPYK
Trigger: CTTATATGGGAAACTCCTCAACTGAACTAGAGCAAC...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAGCGCAGGGATGGATTaGTTAGAGTTTTTCTCTGAA +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSAGMD*LEFFSE
Trigger: TTCAGAGAAAAACTCTAACAAATCCATCCCTGCGCT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp ACAGCCACAAGGCAAGAGGGTAATATTTATTTTGATAGCAATATGGATCATCTTGTGGATGTTATGGAGTaGCTGATAATGACGGAGAAG +
Preference number: 5 (lower is better)
Translates to: TATRQEGNIYFDSNMDHLVDVME*LIMTEK
Trigger: CTTCTCCGTCATTATCAGCAACTCCATAACATCCAC...AAGATGATCCATATTGCTATCAAAATAAATATTACCCTCTTGCCTTGTGGCTGT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000165201.9
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTTGCTTAATGGTACACTaGTGGATGTTATGGAGTTGC +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPCLMVH*WMLWSC
Trigger: GCAACTCCATAACATCCACAAGTGTACCATTAAGCA...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATTGCTTAATGGTACACTaGTGGATGTTATGGAGTTGC +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHCLMVH*WMLWSC
Trigger: GCAACTCCATAACATCCACAAGTGTACCATTAAGCA...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAGTGCACACATTTCGTaGAAAGTTCATCTTGAGTGC +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPSAHIS*KVHLEC
Trigger: GCACTCAAGATGAACTTTCAACGAAATGTGTGCACT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp TTGTTTCATGTTACCGTTTACAACTTTAATGCACACATACACACACGCACACATAATAGTTGGGGTGTTTaGCAGGTCTCATGTACTTTT +
Preference number: 5 (lower is better)
Translates to: LFHVTVYNFNAHIHTRTHNSWGV*QVSCTF
Trigger: AAAAGTACATGAGACCTGCAAAACACCCCAACTATT...ATGTGTGCGTGTGTGTATGTGTGCATTAAAGTTGTAAACGGTAACATGAAACAA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS-3UTR CAA 90 bp CACACATACACACTAGAGATACCTACTGCAATAGAAATAGTTGCTTCATTACCTAATAGTTGGGGTGTTTaGCAGGTCTCATGTACTTTT +
Preference number: 5 (lower is better)
Translates to: HTYTLEIPTAIEIVASLPNSWGV*QVSCTF
Trigger: AAAAGTACATGAGACCTGCAAAACACCCCAACTATT...AGGTAATGAAGCAACTATTTCTATTGCAGTAGGTATCTCTAGTGTGTATGTGTG
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS GCA 72 bp TTGGTGCACGAGTGCTCCTTGCTGTCCCTGACAGCCTaGTGCCCGTCAGATCCTAGCAGGTGGTTGGCCTCC +
Preference number: 6 (lower is better)
Translates to: LVHECSLLSLTA*CPSDPSRWLAS
Trigger: GGAGGCCAACCACCTGCTAGGATCTGACGGGCAGCAGGCTGTCAGGGACAGCAAGGAGCACTCGTGCACCAA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 72 bp GCTCTCTCCGGAGGCAGGATACTGCTGGGTAAGAGATaGAGACTTCTCGCTGCCAGCAGGAGCCCCTTGCAG +
Preference number: 6 (lower is better)
Translates to: ALSGGRILLGKR*RLLAASRSPLQ
Trigger: CTGCAAGGGGCTCCTGCTGGCAGCGAGAAGTCTGCATCTCTTACCCAGCAGTATCCTGCCTCCGGAGAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 72 bp TCCCTGACAGCCTGCTGCCCGTCAGATCCTAGCAGGTaGTTGGCCTCCTGTTTGACATCCGATGCTTGGGAC +
Preference number: 6 (lower is better)
Translates to: SLTACCPSDPSR*LASCLTSDAWD
Trigger: GTCCCAAGCATCGGATGTCAAACAGGAGGCCAACCACCTGCTAGGATCTGACGGGCAGCAGGCTGTCAGGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 72 bp CTCGCAGACTCCCCCAGCAGCGCTGGAAGATGGCTCTaGGCCATGCGTGCTGTGTTCCTCCTTCGAGTTCAA +
Preference number: 6 (lower is better)
Translates to: LADSPSSAGRWL*AMRAVFLLRVQ
Trigger: TTGAACTCGAAGGAGGAACACAGCACGCATGGCCAAGAGCCATCTTCCAGCGCTGCTGGGGGAGTCTGCGAG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184885.8
CDS CAA 90 bp TTGCTGTCCCTGACAGCCTGCTGCCCGTCAGATCCTAGCAGGTGGTaGGCCTCCTGTTTGACATCCGATGCTTGGGACTCATGCACGGTC +
Preference number: 6 (lower is better)
Translates to: LLSLTACCPSDPSRW*ASCLTSDAWDSCTV
Trigger: GACCGTGCATGAGTCCCAAGCATCGGATGTCAAACAGGAGGCCAACCACCTGCTAGGATCTGACGGGCAGCAGGCTGTCAGGGACAGCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 90 bp GTGCCAGGTGGGCAGCTTCAACATTGGGGCTGTCCCTCAGAGTCTTaGTCTGCTCTTGGGAGCTGGACACAGGCGTCAAGACCCCTAAGC +
Preference number: 6 (lower is better)
Translates to: VPGGQLQHWGCPSES*SALGSWTQASRPLS
Trigger: GCTTAGGGGTCTTGACGCCTGTGTCCAGCTCCCAAGAGCAGACAAAGACTCTGAGGGACAGCCCCAATGTTGAAGCTGCCCACCTGGCAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 90 bp GATGCAGACTTCTCGCTGCCAGCAGGAGCCCCTTGCAGGAAGCCCTaGGTATCTACTGCCAAGCCATACATAGGTCGTGCCAGGTGGGCA +
Preference number: 6 (lower is better)
Translates to: DADFSLPAGAPCRKP*VSTAKPYIGRARWA
Trigger: TGCCCACCTGGCACGACCTATGTATGGCTTGGCAGTAGATACCAAGGGCTTCCTGCAAGGGGCTCCTGCTGGCAGCGAGAAGTCTGCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS TCA 72 bp AATCGCATTTGGTGCACGAGTGCTCCTTGCTGTCCCTaGCAGCCTGCTGCCCGTCAGATCCTAGCAGGTGGT +
Preference number: 6 (lower is better)
Translates to: NRIWCTSAPCCP*QPAARQILAGG
Trigger: ACCACCTGCTAGGATCTGACGGGCAGCAGGCTGTCAGGGACAGCAAGGAGCACTCGTGCACCAAATGCGATT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 72 bp ACTCCCCCAGCAGCGCTGGAAGATGGCTCTTGGCCATaGGTGCTGTGTTCCTCCTTCGAGTTCAACTCTGCA +
Preference number: 6 (lower is better)
Translates to: TPPAALEDGSWP*VLCSSFEFNSA
Trigger: TGCAGAGTTGAACTCGAAGGAGGAACACAGCACGCATGGCCAAGAGCCATCTTCCAGCGCTGCTGGGGGAGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000184885.8
CDS CCA 72 bp CTCTTCGCCTCCGTAACAGCGACTGGGATTCATCCTTaGTCTTGCTCTCTCCGGAGGCAGGATACTGCTGGG +
Preference number: 6 (lower is better)
Translates to: LFASVTATGIHP*SCSLRRQDTAG
Trigger: CCCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGAGGCGAAGAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 72 bp CTGACAGCCTGCTGCCCGTCAGATCCTAGCAGGTGGTaGGCCTCCTGTTTGACATCCGATGCTTGGGACTCA +
Preference number: 6 (lower is better)
Translates to: LTACCPSDPSRW*ASCLTSDAWDS
Trigger: TGAGTCCCAAGCATCGGATGTCAAACAGGAGGCCAACCACCTGCTAGGATCTGACGGGCAGCAGGCTGTCAG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 72 bp TTCTCGCTGCCAGCAGGAGCCCCTTGCAGGAAGCCCTaGGTATCTACTGCCAAGCCATACATAGGTCGTGCC +
Preference number: 6 (lower is better)
Translates to: FSLPAGAPCRKP*VSTAKPYIGRA
Trigger: GGCACGACCTATGTATGGCTTGGCAGTAGATACCAAGGGCTTCCTGCAAGGGGCTCCTGCTGGCAGCGAGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 72 bp CCTCTTCGCCTCCGTAACAGCGACTGGGATTCATCCTaGGTCTTGCTCTCTCCGGAGGCAGGATACTGCTGG +
Preference number: 6 (lower is better)
Translates to: PLRLRNSDWDSS*VLLSPEAGYCW
Trigger: CCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGAGGCGAAGAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 90 bp ACTGCCAAGCCATACATAGGTCGTGCCAGGTGGGCAGCTTCAACATaGGGGCTGTCCCTCAGAGTCTTTGTCTGCTCTTGGGAGCTGGAC +
Preference number: 6 (lower is better)
Translates to: TAKPYIGRARWAAST*GLSLRVFVCSWELD
Trigger: GTCCAGCTCCCAAGAGCAGACAAAGACTCTGAGGGACAGCCCCAATGTTGAAGCTGCCCACCTGGCACGACCTATGTATGGCTTGGCAGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 90 bp CTGCTGGGTAAGAGATGCAGACTTCTCGCTGCCAGCAGGAGCCCCTaGCAGGAAGCCCTTGGTATCTACTGCCAAGCCATACATAGGTCG +
Preference number: 6 (lower is better)
Translates to: LLGKRCRLLAASRSP*QEALGIYCQAIHRS
Trigger: CGACCTATGTATGGCTTGGCAGTAGATACCAAGGGCTTCCTGCAAGGGGCTCCTGCTGGCAGCGAGAAGTCTGCATCTCTTACCCAGCAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS TCA 72 bp GCCCGTCAGATCCTAGCAGGTGGTTGGCCTCCTGTTTaGCATCCGATGCTTGGGACTCATGCACGGTCTCAT +
Preference number: 6 (lower is better)
Translates to: ARQILAGGWPPV*HPMLGTHARSH
Trigger: ATGAGACCGTGCATGAGTCCCAAGCATCGGATGTCAAACAGGAGGCCAACCACCTGCTAGGATCTGACGGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 72 bp TGGGGTGCAGGCCATATCTTGAGGGTCATCTGCCTCTaGTCTTTGAGGAGACTTCAAGGGCTCGCAGACTCC +
Preference number: 6 (lower is better)
Translates to: WGAGHILRVICL*SLRRLQGLADS
Trigger: GGAGTCTGCGAGCCCTTGAAGTCTCCTCAAAGAGCAGAGGCAGATGACCCTCAAGATATGGCCTGCACCCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184885.8
ENSMUST00000185183.2
CDS GCA 72 bp AGAGATGCAGACTTCTCGCTGCCAGCAGGAGCCCCTTaGAGGAAGCCCTTGGTATCTACTGCCAAGCCATAC +
Preference number: 6 (lower is better)
Translates to: RDADFSLPAGAP*RKPLVSTAKPY
Trigger: GTATGGCTTGGCAGTAGATACCAAGGGCTTCCTGCAAGGGGCTCCTGCTGGCAGCGAGAAGTCTGCATCTCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 72 bp AATGACAGAGCCCCTGGGAAGCTTGTCATTCAACTCTaGATTAAGGCCGCCCGACTGCACTGCTCCGTGCTG +
Preference number: 6 (lower is better)
Translates to: NDRAPGKLVIQL*IKAARLHCSVL
Trigger: CAGCACGGAGCAGTGCAGTCGGGCGGCCTTAATCCAGAGTTGAATGACAAGCTTCCCAGGGGCTCTGTCATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS CCA 72 bp GGCTGTCCCTCAGAGTCTTTGTCTGCTCTTGGGAGCTaGACACAGGCGTCAAGACCCCTAAGCTTGCTTGAG +
Preference number: 6 (lower is better)
Translates to: GCPSESLSALGS*TQASRPLSLLE
Trigger: CTCAAGCAAGCTTAGGGGTCTTGACGCCTGTGTCCAGCTCCCAAGAGCAGACAAAGACTCTGAGGGACAGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 72 bp TCCTTGGTCTTGCTCTCTCCGGAGGCAGGATACTGCTaGGTAAGAGATGCAGACTTCTCGCTGCCAGCAGGA +
Preference number: 6 (lower is better)
Translates to: SLVLLSPEAGYC*VRDADFSLPAG
Trigger: TCCTGCTGGCAGCGAGAAGTCTGCATCTCTTACCCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGA
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 72 bp ACCTTCCTACCCGTAACAGCGACTGGGATTCATCCTTaGTCTTGCTCTCTCCGGAGGCAGGATACTGCTGGG +
Preference number: 6 (lower is better)
Translates to: TFLPVTATGIHP*SCSLRRQDTAG
Trigger: CCCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGGTAGGAAGGT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS CCA 72 bp TTGTCACAGCCCGTAACAGCGACTGGGATTCATCCTTaGTCTTGCTCTCTCCGGAGGCAGGATACTGCTGGG +
Preference number: 6 (lower is better)
Translates to: LSQPVTATGIHP*SCSLRRQDTAG
Trigger: CCCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGGCTGTGACAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183997.8
CDS CCA 72 bp GGTGTTCCGGAGATTGTCACAGCCCGTAACAGCGACTaGGATTCATCCTTGGTCTTGCTCTCTCCGGAGGCA +
Preference number: 6 (lower is better)
Translates to: GVPEIVTARNSD*DSSLVLLSPEA
Trigger: TGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGGCTGTGACAATCTCCGGAACACC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183997.8
CDS CAA 72 bp TCGGGGGTAGAGAAGGAACACTGGTGGCATTGGTGTTaGACTCTCGAACTTCCGGCCACCCCAGGAGACAAG +
Preference number: 6 (lower is better)
Translates to: SGVEKEHWWHWC*TLELPATPGDK
Trigger: CTTGTCTCCTGGGGTGGCCGGAAGTTCGAGAGTCAAACACCAATGCCACCAGTGTTCCTTCTCTACCCCCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS CAA 72 bp TGCCCGTCAGATCCTAGCAGGTGGTTGGCCTCCTGTTaGACATCCGATGCTTGGGACTCATGCACGGTCTCA +
Preference number: 6 (lower is better)
Translates to: CPSDPSRWLASC*TSDAWDSCTVS
Trigger: TGAGACCGTGCATGAGTCCCAAGCATCGGATGTCAAACAGGAGGCCAACCACCTGCTAGGATCTGACGGGCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 72 bp GGGCAGCTTCAACATTGGGGCTGTCCCTCAGAGTCTTaGTCTGCTCTTGGGAGCTGGACACAGGCGTCAAGA +
Preference number: 6 (lower is better)
Translates to: GQLQHWGCPSES*SALGSWTQASR
Trigger: TCTTGACGCCTGTGTCCAGCTCCCAAGAGCAGACAAAGACTCTGAGGGACAGCCCCAATGTTGAAGCTGCCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 72 bp CGCCTCCGTAACAGCGACTGGGATTCATCCTTGGTCTaGCTCTCTCCGGAGGCAGGATACTGCTGGGTAAGA +
Preference number: 6 (lower is better)
Translates to: RLRNSDWDSSLV*LSPEAGYCWVR
Trigger: TCTTACCCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGAGGCG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 90 bp TCTTCCACCTGGGTTATAAAATCGCATTTGGTGCACGAGTGCTCCTaGCTGTCCCTGACAGCCTGCTGCCCGTCAGATCCTAGCAGGTGG +
Preference number: 6 (lower is better)
Translates to: SSTWVIKSHLVHECS*LSLTACCPSDPSRW
Trigger: CCACCTGCTAGGATCTGACGGGCAGCAGGCTGTCAGGGACAGCAAGGAGCACTCGTGCACCAAATGCGATTTTATAACCCAGGTGGAAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 90 bp GATCCTCTTCGCCTCCGTAACAGCGACTGGGATTCATCCTTGGTCTaGCTCTCTCCGGAGGCAGGATACTGCTGGGTAAGAGATGCAGAC +
Preference number: 6 (lower is better)
Translates to: DPLRLRNSDWDSSLV*LSPEAGYCWVRDAD
Trigger: GTCTGCATCTCTTACCCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGAGGCGAAGAGGATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS TCA 72 bp CCACTTCCCCTCTGCTGTTTGTTGAGCTGCTCAGCCTaGAGTGCCTCTGGGTTAAGGCGCTTTCTTGTCCGT +
Preference number: 6 (lower is better)
Translates to: PLPLCCLLSCSA*SASGLRRFLVR
Trigger: ACGGACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAACAAACAGCAGAGGGGAAGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 72 bp TCCACCTGGGTTATAAAATCGCATTTGGTGCACGAGTaGTCCTTGCTGTCCCTGACAGCCTGCTGCCCGTCA +
Preference number: 6 (lower is better)
Translates to: STWVIKSHLVHE*SLLSLTACCPS
Trigger: TGACGGGCAGCAGGCTGTCAGGGACAGCAAGGAGCACTCGTGCACCAAATGCGATTTTATAACCCAGGTGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 72 bp TCTACATCGGGGGTAGAGAAGGAACACTGGTGGCATTaGTGTTTGACTCTCGAACTTCCGGCCACCCCAGGA +
Preference number: 6 (lower is better)
Translates to: STSGVEKEHWWH*CLTLELPATPG
Trigger: TCCTGGGGTGGCCGGAAGTTCGAGAGTCAAACACCAATGCCACCAGTGTTCCTTCTCTACCCCCGATGTAGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS CCA 72 bp GTATCTACTGCCAAGCCATACATAGGTCGTGCCAGGTaGGCAGCTTCAACATTGGGGCTGTCCCTCAGAGTC +
Preference number: 6 (lower is better)
Translates to: VSTAKPYIGRAR*AASTLGLSLRV
Trigger: GACTCTGAGGGACAGCCCCAATGTTGAAGCTGCCCACCTGGCACGACCTATGTATGGCTTGGCAGTAGATAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 72 bp GGCCACGGAAACTGGACTCAAACCTTGACAATTGGCTaGACCACTCTGCACTGGCCCTGTTTCCTCAGTGGC +
Preference number: 6 (lower is better)
Translates to: GHGNWTQTLTIG*TTLHWPCFLSG
Trigger: GCCACTGAGGAAACAGGGCCAGTGCAGAGTGGTCAAGCCAATTGTCAAGGTTTGAGTCCAGTTTCCGTGGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184885.8
ENSMUST00000185183.2
CDS CAA 72 bp ATCTACATCGGGGGTAGAGAAGGAACACTGGTGGCATaGGTGTTTGACTCTCGAACTTCCGGCCACCCCAGG +
Preference number: 6 (lower is better)
Translates to: IYIGGREGTLVA*VFDSRTSGHPR
Trigger: CCTGGGGTGGCCGGAAGTTCGAGAGTCAAACACCAATGCCACCAGTGTTCCTTCTCTACCCCCGATGTAGAT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS CAA 72 bp CTTGGGAGCTGGACACAGGCGTCAAGACCCCTAAGCTaGCTTGAGTGTAGGATGGACTACCCCGTAGGATGT +
Preference number: 6 (lower is better)
Translates to: LGSWTQASRPLS*LECRMDYPVGC
Trigger: ACATCCTACGGGGTAGTCCATCCTACACTCAAGCAAGCTTAGGGGTCTTGACGCCTGTGTCCAGCTCCCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 72 bp AAGAGATGCAGACTTCTCGCTGCCAGCAGGAGCCCCTaGCAGGAAGCCCTTGGTATCTACTGCCAAGCCATA +
Preference number: 6 (lower is better)
Translates to: KRCRLLAASRSP*QEALGIYCQAI
Trigger: TATGGCTTGGCAGTAGATACCAAGGGCTTCCTGCAAGGGGCTCCTGCTGGCAGCGAGAAGTCTGCATCTCTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 72 bp CCTACCCGTAACAGCGACTGGGATTCATCCTTGGTCTaGCTCTCTCCGGAGGCAGGATACTGCTGGGTAAGA +
Preference number: 6 (lower is better)
Translates to: PTRNSDWDSSLV*LSPEAGYCWVR
Trigger: TCTTACCCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGGTAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS CAA 72 bp AACCTTCCTACCCGTAACAGCGACTGGGATTCATCCTaGGTCTTGCTCTCTCCGGAGGCAGGATACTGCTGG +
Preference number: 6 (lower is better)
Translates to: NLPTRNSDWDSS*VLLSPEAGYCW
Trigger: CCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGGTAGGAAGGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS CAA 72 bp ACAGCCCGTAACAGCGACTGGGATTCATCCTTGGTCTaGCTCTCTCCGGAGGCAGGATACTGCTGGGTAAGA +
Preference number: 6 (lower is better)
Translates to: TARNSDWDSSLV*LSPEAGYCWVR
Trigger: TCTTACCCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGGCTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183997.8
CDS CAA 72 bp ATTGTCACAGCCCGTAACAGCGACTGGGATTCATCCTaGGTCTTGCTCTCTCCGGAGGCAGGATACTGCTGG +
Preference number: 6 (lower is better)
Translates to: IVTARNSDWDSS*VLLSPEAGYCW
Trigger: CCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGGCTGTGACAAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183997.8
CDS CAA 90 bp GACAGAGGTGCCGGGTCTGGGTTGTCATTCACCAGTAAGTCACCTTaGGGTTTACTCAGTCTGACACCCCCATCTGAAGGCACTTGTGGG +
Preference number: 6 (lower is better)
Translates to: DRGAGSGLSFTSKSP*GLLSLTPPSEGTCG
Trigger: CCCACAAGTGCCTTCAGATGGGGGTGTCAGACTGAGTAAACCCAAAGGTGACTTACTGGTGAATGACAACCCAGACCCGGCACCTCTGTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184885.8
ENSMUST00000185183.2
CDS CAA 90 bp ACATCTACATCGGGGGTAGAGAAGGAACACTGGTGGCATTGGTGTTaGACTCTCGAACTTCCGGCCACCCCAGGAGACAAGTGCAACAGC +
Preference number: 6 (lower is better)
Translates to: TSTSGVEKEHWWHWC*TLELPATPGDKCNS
Trigger: GCTGTTGCACTTGTCTCCTGGGGTGGCCGGAAGTTCGAGAGTCAAACACCAATGCCACCAGTGTTCCTTCTCTACCCCCGATGTAGATGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS CAA 90 bp ACACCAGATCCTCTTCGCCTCCGTAACAGCGACTGGGATTCATCCTaGGTCTTGCTCTCTCCGGAGGCAGGATACTGCTGGGTAAGAGAT +
Preference number: 6 (lower is better)
Translates to: TPDPLRLRNSDWDSS*VLLSPEAGYCWVRD
Trigger: ATCTCTTACCCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGAGGCGAAGAGGATCTGGTGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 90 bp GGAAACCTTCCTACCCGTAACAGCGACTGGGATTCATCCTTGGTCTaGCTCTCTCCGGAGGCAGGATACTGCTGGGTAAGAGATGCAGAC +
Preference number: 6 (lower is better)
Translates to: GNLPTRNSDWDSSLV*LSPEAGYCWVRDAD
Trigger: GTCTGCATCTCTTACCCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGGTAGGAAGGTTTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183421.2
CDS CAA 90 bp GAGATTGTCACAGCCCGTAACAGCGACTGGGATTCATCCTTGGTCTaGCTCTCTCCGGAGGCAGGATACTGCTGGGTAAGAGATGCAGAC +
Preference number: 6 (lower is better)
Translates to: EIVTARNSDWDSSLV*LSPEAGYCWVRDAD
Trigger: GTCTGCATCTCTTACCCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGGCTGTGACAATCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183997.8
CDS CAA 90 bp GTTCCGGAGATTGTCACAGCCCGTAACAGCGACTGGGATTCATCCTaGGTCTTGCTCTCTCCGGAGGCAGGATACTGCTGGGTAAGAGAT +
Preference number: 6 (lower is better)
Translates to: VPEIVTARNSDWDSS*VLLSPEAGYCWVRD
Trigger: ATCTCTTACCCAGCAGTATCCTGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGGCTGTGACAATCTCCGGAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183997.8
CDS TCA 72 bp GATACCTTGCTCTCTGTAGCTGTTGGCTCCAGGGTTTaGCCCTCGCCTTCACTAGCAACGTTTCTCAGAGGG +
Preference number: 6 (lower is better)
Translates to: DTLLSVAVGSRV*PSPSLATFLRG
Trigger: CCCTCTGAGAAACGTTGCTAGTGAAGGCGAGGGTCAAACCCTGGAGCCAACAGCTACAGAGAGCAAGGTATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184885.8
ENSMUST00000185183.2
CDS TCA 72 bp GCACTGAGTAGCCGACAGGGGTGTCATCTCCAGCTTTaGCTGTCATTTTGTCCTGCCACTTTCCCACATCCC +
Preference number: 6 (lower is better)
Translates to: ALSSRQGCHLQL*LSFCPATFPHP
Trigger: GGGATGTGGGAAAGTGGCAGGACAAAATGACAGTCAAAGCTGGAGATGACACCCCTGTCGGCTACTCAGTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 72 bp TCCCCTCTGCTGTTTGTTGAGCTGCTCAGCCTGAAGTaGCTCTGGGTTAAGGCGCTTTCTTGTCCGTCTTCT +
Preference number: 6 (lower is better)
Translates to: SPLLFVELLSLK*LWVKALSCPSS
Trigger: AGAAGACGGACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAACAAACAGCAGAGGGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 72 bp CACTCAGGCCTGAGATTTGCAAGTCCTTCTTACCGCTaGAAGATGGCTCTTGGCCATGCGTGCTGTGTTCCT +
Preference number: 6 (lower is better)
Translates to: HSGLRFASPSYR*KMALGHACCVP
Trigger: AGGAACACAGCACGCATGGCCAAGAGCCATCTTCCAGCGGTAAGAAGGACTTGCAAATCTCAGGCCTGAGTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000185183.2
CDS CCA 72 bp AGCACATCTACATCGGGGGTAGAGAAGGAACACTGGTaGCATTGGTGTTTGACTCTCGAACTTCCGGCCACC +
Preference number: 6 (lower is better)
Translates to: STSTSGVEKEHW*HWCLTLELPAT
Trigger: GGTGGCCGGAAGTTCGAGAGTCAAACACCAATGCCACCAGTGTTCCTTCTCTACCCCCGATGTAGATGTGCT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS CCA 72 bp AAAACACCAGATCCTCTTCGCCTCCGTAACAGCGACTaGGATTCATCCTTGGTCTTGCTCTCTCCGGAGGCA +
Preference number: 6 (lower is better)
Translates to: KTPDPLRLRNSD*DSSLVLLSPEA
Trigger: TGCCTCCGGAGAGAGCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGAGGCGAAGAGGATCTGGTGTTTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 72 bp GCCGGGTCTGGGTTGTCATTCACCAGTAAGTCACCTTaGGGTTTACTCAGTCTGACACCCCCATCTGAAGGC +
Preference number: 6 (lower is better)
Translates to: AGSGLSFTSKSP*GLLSLTPPSEG
Trigger: GCCTTCAGATGGGGGTGTCAGACTGAGTAAACCCAAAGGTGACTTACTGGTGAATGACAACCCAGACCCGGC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184885.8
ENSMUST00000185183.2
CDS CAA 72 bp CCGACAGGGGTGTCATCTCCAGCTTTGACTGTCATTTaGTCCTGCCACTTTCCCACATCCCCAGAGTCACTG +
Preference number: 6 (lower is better)
Translates to: PTGVSSPALTVI*SCHFPTSPESL
Trigger: CAGTGACTCTGGGGATGTGGGAAAGTGGCAGGACAAAATGACAGTCAAAGCTGGAGATGACACCCCTGTCGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 90 bp AAACACCAGATCCTCTTCGCCTCCTCCTGTTTGGTGTTCCGGAGATaGTCACAGCCCGTAACAGCGACTGGGATTCATCCTTGGTCTTGC +
Preference number: 6 (lower is better)
Translates to: KHQILFASSCLVFRR*SQPVTATGIHPWSC
Trigger: GCAAGACCAAGGATGAATCCCAGTCGCTGTTACGGGCTGTGACAATCTCCGGAACACCAAACAGGAGGAGGCGAAGAGGATCTGGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000183997.8
CDS GCA 72 bp CCTTCTTACCGCTGGAAGATGGCTCTTGGCCATGCGTaGTGTGTTCCTCCTTCGAGTTCAACTCTGCAACAT +
Preference number: 6 (lower is better)
Translates to: PSYRWKMALGHA*CVPPSSSTLQH
Trigger: ATGTTGCAGAGTTGAACTCGAAGGAGGAACACAGCACGCATGGCCAAGAGCCATCTTCCAGCGGTAAGAAGG
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000185183.2
CDS GCA 72 bp AAGTCCTTCTTACCGCTGGAAGATGGCTCTTGGCCATaGGTGCTGTGTTCCTCCTTCGAGTTCAACTCTGCA +
Preference number: 6 (lower is better)
Translates to: KSFLPLEDGSWP*VLCSSFEFNSA
Trigger: TGCAGAGTTGAACTCGAAGGAGGAACACAGCACGCATGGCCAAGAGCCATCTTCCAGCGGTAAGAAGGACTT
53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000185183.2
CDS CCA 72 bp TTGAGGCCACGGAAACTGGACTCAAACCTTGACAATTaGCTTGACCACTCTGCACTGGCCCTGTTTCCTCAG +
Preference number: 6 (lower is better)
Translates to: LRPRKLDSNLDN*LDHSALALFPQ
Trigger: CTGAGGAAACAGGGCCAGTGCAGAGTGGTCAAGCCAATTGTCAAGGTTTGAGTCCAGTTTCCGTGGCCTCAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184885.8
ENSMUST00000185183.2
CDS TCA 72 bp CATAGGTTCCGTTTAGTAAAGCAGGCCGTGAAGAGCTaGTATCCTGCAGCACGCCAGAAAGCACAGAACGGT +
Preference number: 6 (lower is better)
Translates to: HRFRLVKQAVKS*YPAARQKAQNG
Trigger: ACCGTTCTGTGCTTTCTGGCGTGCTGCAGGATATCAGCTCTTCACGGCCTGCTTTACTAAACGGAACCTATG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184885.8
CDS TCA 72 bp TCGAAGCGCAGGGATGGATTTGTTAGAGTTTTTCTCTaGAGGTTTCACACCCTCGGAGGACGGGAGAGACAC +
Preference number: 6 (lower is better)
Translates to: SKRRDGFVRVFL*RFHTLGGRERH
Trigger: GTGTCTCTCCCGTCCTCCGAGGGTGTGAAACCTTCAGAGAAAAACTCTAACAAATCCATCCCTGCGCTTCGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 72 bp TTGACTCTCGAACTTCCGGCCACCCCAGGAGACAAGTaGAACAGCAACAGTGCACAGTGGGAACAATTACTT +
Preference number: 6 (lower is better)
Translates to: LTLELPATPGDK*NSNSAQWEQLL
Trigger: AAGTAATTGTTCCCACTGTGCACTGTTGCTGTTGCACTTGTCTCCTGGGGTGGCCGGAAGTTCGAGAGTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS CCA 72 bp TTTGTTCTTCCCAGATACCTTGCTCTCTGTAGCTGTTaGCTCCAGGGTTTGACCCTCGCCTTCACTAGCAAC +
Preference number: 6 (lower is better)
Translates to: FVLPRYLALCSC*LQGLTLAFTSN
Trigger: GTTGCTAGTGAAGGCGAGGGTCAAACCCTGGAGCCAACAGCTACAGAGAGCAAGGTATCTGGGAAGAACAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184885.8
ENSMUST00000185183.2
CDS CCA 72 bp ATTTGCAAGTCCTTCTTACCGCTGGAAGATGGCTCTTaGCCATGCGTGCTGTGTTCCTCCTTCGAGTTCAAC +
Preference number: 6 (lower is better)
Translates to: ICKSFLPLEDGS*PCVLCSSFEFN
Trigger: GTTGAACTCGAAGGAGGAACACAGCACGCATGGCCAAGAGCCATCTTCCAGCGGTAAGAAGGACTTGCAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000185183.2
CDS CCA 72 bp GGGCCAAGATTTTGCTGTCCAGCTCAGCATCCTGCCTaGTGCGATTATGCAGTCCTAAGTGATACTTTCGGA +
Preference number: 6 (lower is better)
Translates to: GPRFCCPAQHPA*CDYAVLSDTFG
Trigger: TCCGAAAGTATCACTTAGGACTGCATAATCGCACCAGGCAGGATGCTGAGCTGGACAGCAAAATCTTGGCCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184885.8
CDS CAA 72 bp GATTTGCAAGTCCTTCTTACCGCTGGAAGATGGCTCTaGGCCATGCGTGCTGTGTTCCTCCTTCGAGTTCAA +
Preference number: 6 (lower is better)
Translates to: DLQVLLTAGRWL*AMRAVFLLRVQ
Trigger: TTGAACTCGAAGGAGGAACACAGCACGCATGGCCAAGAGCCATCTTCCAGCGGTAAGAAGGACTTGCAAATC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000185183.2
CDS CAA 72 bp GAGATCTCTTCTTCCACCTGGGTTATAAAATCGCATTaGGTGCACGAGTGCTCCTTGCTGTCCCTGACAGCC +
Preference number: 6 (lower is better)
Translates to: EISSSTWVIKSH*VHECSLLSLTA
Trigger: GGCTGTCAGGGACAGCAAGGAGCACTCGTGCACCAAATGCGATTTTATAACCCAGGTGGAAGAAGAGATCTC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS TCA 72 bp TGCCCCTCTCCAAGCCACACCACGAAGGTCATCAGTTaGACTCTCAGTCCAGATTTTATCTTTCAGCCCTTC +
Preference number: 6 (lower is better)
Translates to: CPSPSHTTKVIS*TLSPDFIFQPF
Trigger: GAAGGGCTGAAAGATAAAATCTGGACTGAGAGTTCAACTGATGACCTTCGTGGTGTGGCTTGGAGAGGGGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 72 bp TCTGGGCTGCAAAGGCCTCTGGGACAGAATGGACAGTaGTTAATGGTACACTTGTGGATGTTATGGAGTTGC +
Preference number: 6 (lower is better)
Translates to: SGLQRPLGQNGQ*LMVHLWMLWSC
Trigger: GCAACTCCATAACATCCACAAGTGTACCATTAAGCACTGTCCATTCTGTCCCAGAGGCCTTTGCAGCCCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS CCA 72 bp GAAAGCCAACATATTTCTGTCTGTTACCTCATCATGTaGGAAGGAGACAAGGCTCCCTCCCTTACTGGGGCT +
Preference number: 6 (lower is better)
Translates to: ESQHISVCYLIM*EGDKAPSLTGA
Trigger: AGCCCCAGTAAGGGAGGGAGCCTTGTCTCCTTCCCACATGATGAGGTAACAGACAGAAATATGTTGGCTTTC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000185183.2
CDS CAA 72 bp CTGCCCCTCTCCAAGCCACACCACGAAGGTCATCAGTaGAACTCTCAGTCCAGATTTTATCTTTCAGCCCTT +
Preference number: 6 (lower is better)
Translates to: LPLSKPHHEGHQ*NSQSRFYLSAL
Trigger: AAGGGCTGAAAGATAAAATCTGGACTGAGAGTTCAACTGATGACCTTCGTGGTGTGGCTTGGAGAGGGGCAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 72 bp TGCAGGCCCCTCTGGATATGTGTTGTGAAGTCATATTaGTCCGTGCAAAGATGCTGGCATATGCTGCACTGG +
Preference number: 6 (lower is better)
Translates to: CRPLWICVVKSY*SVQRCWHMLHW
Trigger: CCAGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACATATCCAGAGGGGCCTGCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 90 bp GTAGGATGTCTGCCCCTCTCCAAGCCACACCACGAAGGTCATCAGTaGAACTCTCAGTCCAGATTTTATCTTTCAGCCCTTCCTTGTCAT +
Preference number: 6 (lower is better)
Translates to: VGCLPLSKPHHEGHQ*NSQSRFYLSALPCH
Trigger: ATGACAAGGAAGGGCTGAAAGATAAAATCTGGACTGAGAGTTCAACTGATGACCTTCGTGGTGTGGCTTGGAGAGGGGCAGACATCCTAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 90 bp TTCTCCTTGGAGGCACCATTTGCAGTTGGCCCAGGTCTGGAATGCTaGATCGCCAAATCTAGAGGAATGTCATTGTCTGATCCAACAGCT +
Preference number: 6 (lower is better)
Translates to: FSLEAPFAVGPGLEC*IAKSRGMSLSDPTA
Trigger: AGCTGTTGGATCAGACAATGACATTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCCAACTGCAAATGGTGCCTCCAAGGAGAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS TCA 72 bp TCAGCATCCTGCCTGGTGCGATTATGCAGTCCTAAGTaGTACTTTCGGAAGTGCTTAATCAGATCTGTGGGG +
Preference number: 6 (lower is better)
Translates to: SASCLVRLCSPK*YFRKCLIRSVG
Trigger: CCCCACAGATCTGATTAAGCACTTCCGAAAGTATCACTTAGGACTGCATAATCGCACCAGGCAGGATGCTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184885.8
CDS TCA 72 bp TGGAAGTCTTTGGAATGGCTGAACTGCACCATGTTATaGAGGGCCAAGATTTTGCTGTCCAGCTCAGCATCC +
Preference number: 6 (lower is better)
Translates to: WKSLEWLNCTML*RAKILLSSSAS
Trigger: GGATGCTGAGCTGGACAGCAAAATCTTGGCCCTTCATAACATGGTGCAGTTCAGCCATTCCAAAGACTTCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184885.8
CDS TCA 72 bp AGGCACCATTTGCAGTTGGCCCAGGTCTGGAATGCTTaGTCGCCAAATCTAGAGGAATGTCATTGTCTGATC +
Preference number: 6 (lower is better)
Translates to: RHHLQLAQVWNA*SPNLEECHCLI
Trigger: GATCAGACAATGACATTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCCAACTGCAAATGGTGCCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 72 bp CCAAGATTTTGCTGTCCAGCTCAGCATCCTGCCTGGTaGGATTATGCAGTCCTAAGTGATACTTTCGGAAGT +
Preference number: 6 (lower is better)
Translates to: PRFCCPAQHPAW*DYAVLSDTFGS
Trigger: ACTTCCGAAAGTATCACTTAGGACTGCATAATCGCACCAGGCAGGATGCTGAGCTGGACAGCAAAATCTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184885.8
CDS GCA 72 bp TTGGAGGCACCATTTGCAGTTGGCCCAGGTCTGGAATaGTTGATCGCCAAATCTAGAGGAATGTCATTGTCT +
Preference number: 6 (lower is better)
Translates to: LEAPFAVGPGLE*LIAKSRGMSLS
Trigger: AGACAATGACATTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCCAACTGCAAATGGTGCCTCCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 72 bp AGTCATATTTGTCCGTGCAAAGATGCTGGCATATGCTaGACTGGAAAGGTCCACTGTCACCATGGCAACTCA +
Preference number: 6 (lower is better)
Translates to: SHICPCKDAGIC*TGKVHCHHGNS
Trigger: TGAGTTGCCATGGTGACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 72 bp GTGCTTTTCTGGGCTGCAAAGGCCTCTGGGACAGAATaGACAGTGCTTAATGGTACACTTGTGGATGTTATG +
Preference number: 6 (lower is better)
Translates to: VLFWAAKASGTE*TVLNGTLVDVM
Trigger: CATAACATCCACAAGTGTACCATTAAGCACTGTCCATTCTGTCCCAGAGGCCTTTGCAGCCCAGAAAAGCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS CCA 72 bp TCAATTTTGGGCTCTTCTTTGATGGTGGGTATGGCATaGCCACCCTCTTCGCCATTAGCAGTAGTGATTTCC +
Preference number: 6 (lower is better)
Translates to: SILGSSLMVGMA*PPSSPLAVVIS
Trigger: GGAAATCACTACTGCTAATGGCGAAGAGGGTGGCCATGCCATACCCACCATCAAAGAAGAGCCCAAAATTGA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 72 bp CTGCTGTTTGTTGAGCTGCTCAGCCTGAAGTGCCTCTaGGTTAAGGCGCTTTCTTGTCCGTCTTCTAATAAT +
Preference number: 6 (lower is better)
Translates to: LLFVELLSLKCL*VKALSCPSSNN
Trigger: ATTATTAGAAGACGGACAAGAAAGCGCCTTAACCCAGAGGCACTTCAGGCTGAGCAGCTCAACAAACAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 72 bp GAGGCACCATTTGCAGTTGGCCCAGGTCTGGAATGCTaGATCGCCAAATCTAGAGGAATGTCATTGTCTGAT +
Preference number: 6 (lower is better)
Translates to: EAPFAVGPGLEC*IAKSRGMSLSD
Trigger: ATCAGACAATGACATTCCTCTAGATTTGGCGATCAAGCATTCCAGACCTGGGCCAACTGCAAATGGTGCCTC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 90 bp TTGTTCCTATGCAGGCCCCTCTGGATATGTGTTGTGAAGTCATATTaGTCCGTGCAAAGATGCTGGCATATGCTGCACTGGAAAGGTCCA +
Preference number: 6 (lower is better)
Translates to: LFLCRPLWICVVKSY*SVQRCWHMLHWKGP
Trigger: TGGACCTTTCCAGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACATATCCAGAGGGGCCTGCATAGGAACAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 90 bp GAAGTTTCTGGTAGAGACCACATGCATTGCATACATATCCGCCATTaGCATTCTTTCGCCAGAGAGAGGTCTTTGTGGTCAGGCAATTGG +
Preference number: 6 (lower is better)
Translates to: EVSGRDHMHCIHIRH*HSFARERSLWSGNW
Trigger: CCAATTGCCTGACCACAAAGACCTCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTATGCAATGCATGTGGTCTCTACCAGAAACTTC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 72 bp GTAGAGACCACATGCATTGCATACATATCCGCCATTTaGATTCTTTCGCCAGAGAGAGGTCTTTGTGGTCAG +
Preference number: 6 (lower is better)
Translates to: VETTCIAYISAI*ILSPERGLCGQ
Trigger: CTGACCACAAAGACCTCTCTCTGGCGAAAGAATGCAAATGGCGGATATGTATGCAATGCATGTGGTCTCTAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 72 bp GTGGATGTTATGGAGTTGCTGATAATGACGGAGAAGTaGACCCACTACAATCACATCAGGGCCATGGCTTTT +
Preference number: 6 (lower is better)
Translates to: VDVMELLIMTEK*THYNHIRAMAF
Trigger: AAAAGCCATGGCCCTGATGTGATTGTAGTGGGTCCACTTCTCCGTCATTATCAGCAACTCCATAACATCCAC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS CCA 72 bp TGTGTTGTGAAGTCATATTTGTCCGTGCAAAGATGCTaGCATATGCTGCACTGGAAAGGTCCACTGTCACCA +
Preference number: 6 (lower is better)
Translates to: CVVKSYLSVQRC*HMLHWKGPLSP
Trigger: TGGTGACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS TCA 72 bp CATTGTTCCTATGCAGGCCCCTCTGGATATGTGTTGTaGAGTCATATTTGTCCGTGCAAAGATGCTGGCATA +
Preference number: 6 (lower is better)
Translates to: HCSYAGPSGYVL*SHICPCKDAGI
Trigger: TATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACATATCCAGAGGGGCCTGCATAGGAACAATG
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS GCA 72 bp GAGTCGAGTGAAGTTTCTGGTAGAGACCACATGCATTaGATACATATCCGCCATTTGCATTCTTTCGCCAGA +
Preference number: 6 (lower is better)
Translates to: ESSEVSGRDHMH*IHIRHLHSFAR
Trigger: TCTGGCGAAAGAATGCAAATGGCGGATATGTATGCAATGCATGTGGTCTCTACCAGAAACTTCACTCGACTC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 72 bp GTGAAATTGCAGAATTTGCAGCGGAAATACTTGGTGTaGCCTTGGCAATCTGGAGTTTTCCGTCCAATGCCA +
Preference number: 6 (lower is better)
Translates to: VKLQNLQRKYLV*PWQSGVFRPMP
Trigger: TGGCATTGGACGGAAAACTCCAGATTGCCAAGGCAACACCAAGTATTTCCGCTGCAAATTCTGCAATTTCAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 90 bp ACAGAATGGACAGTGCTTAATGGTACACTTGTGGATGTTATGGAGTaGCTGATAATGACGGAGAAGTGGACCCACTACAATCACATCAGG +
Preference number: 6 (lower is better)
Translates to: TEWTVLNGTLVDVME*LIMTEKWTHYNHIR
Trigger: CCTGATGTGATTGTAGTGGGTCCACTTCTCCGTCATTATCAGCAACTCCATAACATCCACAAGTGTACCATTAAGCACTGTCCATTCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000184458.8
CDS GCA 72 bp ATATGTGTTGTGAAGTCATATTTGTCCGTGCAAAGATaGTGGCATATGCTGCACTGGAAAGGTCCACTGTCA +
Preference number: 6 (lower is better)
Translates to: ICVVKSYLSVQR*WHMLHWKGPLS
Trigger: TGACAGTGGACCTTTCCAGTGCAGCATATGCCAGCATCTTTGCACGGACAAATATGACTTCACAACACATAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 72 bp TTTTCTGCTTGTGCATTGTTCCTATGCAGGCCCCTCTaGATATGTGTTGTGAAGTCATATTTGTCCGTGCAA +
Preference number: 6 (lower is better)
Translates to: FSACALFLCRPL*ICVVKSYLSVQ
Trigger: TTGCACGGACAAATATGACTTCACAACACATATCCAGAGGGGCCTGCATAGGAACAATGCACAAGCAGAAAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 72 bp ATTGCAGAATTTGCAGCGGAAATACTTGGTGTTGCCTaGGCAATCTGGAGTTTTCCGTCCAATGCCAATGAA +
Preference number: 6 (lower is better)
Translates to: IAEFAAEILGVA*AIWSFPSNANE
Trigger: TTCATTGGCATTGGACGGAAAACTCCAGATTGCCAAGGCAACACCAAGTATTTCCGCTGCAAATTCTGCAAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 90 bp ATAAGTGAAATTGCAGAATTTGCAGCGGAAATACTTGGTGTTGCCTaGGCAATCTGGAGTTTTCCGTCCAATGCCAATGAAAGTTCCTCC +
Preference number: 6 (lower is better)
Translates to: ISEIAEFAAEILGVA*AIWSFPSNANESSS
Trigger: GGAGGAACTTTCATTGGCATTGGACGGAAAACTCCAGATTGCCAAGGCAACACCAAGTATTTCCGCTGCAAATTCTGCAATTTCACTTAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CAA 90 bp CAGATTTTATCTTTCAGCCCTTCCTTGTCATCAAGTTTCTCTCTCTaGACTATGCTCTCGGGAACTGTTTCTCCCATTTTAGAGTCTGGG +
Preference number: 6 (lower is better)
Translates to: QILSFSPSLSSSFSL*TMLSGTVSPILESG
Trigger: CCCAGACTCTAAAATGGGAGAAACAGTTCCCGAGAGCATAGTCAAGAGAGAGAAACTTGATGACAAGGAAGGGCTGAAAGATAAAATCTG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 7 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183421.2
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS TCA 72 bp ATGCCACAGTGCACACATTTCGTTGAAAGTTCATCTTaGGTGCTTCTGTCAACTTTCTCCGTCTTAACTACA +
Preference number: 6 (lower is better)
Translates to: MPQCTHFVESSS*VLLSTFSVLTT
Trigger: TGTAGTTAAGACGGAGAAAGTTGACAGAAGCACTCAAGATGAACTTTCAACGAAATGTGTGCACTGTGGCAT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS TCA 72 bp GTTGCTCTAGTTCAGTTGAGGAGTTTCCCATATAAGTaGAATTGCAGAATTTGCAGCGGAAATACTTGGTGT +
Preference number: 6 (lower is better)
Translates to: VALVQLRSFPYK*NCRICSGNTWC
Trigger: ACACCAAGTATTTCCGCTGCAAATTCTGCAATTTCACTTATATGGGAAACTCCTCAACTGAACTAGAGCAAC
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS TCA 72 bp ATCCAGAAAAACAATGCCACAGTGCACACATTTCGTTaGAAGTTCATCTTGAGTGCTTCTGTCAACTTTCTC +
Preference number: 6 (lower is better)
Translates to: IQKNNATVHTFR*KFILSASVNFL
Trigger: GAGAAAGTTGACAGAAGCACTCAAGATGAACTTTCAACGAAATGTGTGCACTGTGGCATTGTTTTTCTGGAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8
CDS CCA 72 bp TATTTACTCCAGAACCGTAGCCAATCAGCTTCACTCTaGAAGTCATTATGTACAAAAGGAACTCCAAAAAGC +
Preference number: 6 (lower is better)
Translates to: YLLQNRSQSASL*KSLCTKGTPKS
Trigger: GCTTTTTGGAGTTCCTTTTGTACATAATGACTTCCAGAGTGAAGCTGATTGGCTACGGTTCTGGAGTAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 6 transcripts:
ENSMUST00000077935.6
ENSMUST00000165201.9
ENSMUST00000183757.8
ENSMUST00000183997.8
ENSMUST00000184458.8
ENSMUST00000184885.8