RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRPM5 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000009246

Ensembl transcript IDs: ENSMUST00000009390.10, ENSMUST00000136602.8, ENSMUST00000148715.8, ENSMUST00000150867.2

Found 316 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TCCAAGGGGTCAGGCAAGTCTCTCTCCAGATGTTGTCGCTTATGCTaGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGG +
Preference number: 1 (lower is better)
Translates to: SKGSGKSLSRCCRLC*ASFLKTCLSTRLRW
Trigger: CCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAAGCGACAACATCTGGAGAGAGACTTGCCTGACCCCTTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR TCA 90 bp CTGTCCCTCCTCCGTTTCTCCATGGTACTCAGGAAGTTCTCCTTTTaGACCGTTTCCCAGGTAATGATCTTCTGGTCCAAGGGGTCAGGC +
Preference number: 1 (lower is better)
Translates to: LSLLRFSMVLRKFSF*TVSQVMIFWSKGSG
Trigger: GCCTGACCCCTTGGACCAGAAGATCATTACCTGGGAAACGGTTCAAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR CCA 90 bp ACCACAGGTTATAGGAAGAGGATGAGTTGTGAAGCAGCATATGGTTaGTGTCTGGCTGTGTCTCCAGGACTTGTGTGTGTAAGACACAGC +
Preference number: 1 (lower is better)
Translates to: TTGYRKRMSCEAAYG*CLAVSPGLVCVRHS
Trigger: GCTGTGTCTTACACACACAAGTCCTGGAGACACAGCCAGACACCAACCATATGCTGCTTCACAACTCATCCTCTTCCTATAACCTGTGGT
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
3UTR GCA 90 bp GTATTCAACGATGAGGTGGTAGCGTTGAAACTTCCAGAACATGTCTaGATTGCCTTGCACCACCTGGAATGTGTAGCTGTAGTGTTGGCT +
Preference number: 1 (lower is better)
Translates to: VFNDEVVALKLPEHV*IALHHLECVAVVLA
Trigger: AGCCAACACTACAGCTACACATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAACGCTACCACCTCATCGTTGAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR GCA 90 bp AATCTTGCCCTGCTGGAGAGGATACTTCTGAGGCTCCCGAATAGATaGCAAAGACATGAGTTTCATTCTCTTAGGAAGGGATGTCCAAGA +
Preference number: 1 (lower is better)
Translates to: NLALLERILLRLPNR*QRHEFHSLRKGCPR
Trigger: TCTTGGACATCCCTTCCTAAGAGAATGAAACTCATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTATCCTCTCCAGCAGGGCAAGATT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
3UTR-3UTR CCA 90 bp GCCTCACCTTGCCTTCCCCACTCCAGTGAGGACTGCCGTGAAGGTTTGCCATGGGAAGCAGCATATGGTTaGTGTCTGGCTGTGTCTCCA +
Preference number: 2 (lower is better)
Translates to: ASPCLPHSSEDCREGLPWEAAYG*CLAVSP
Trigger: TGGAGACACAGCCAGACACCAACCATATGCTGCTTC...CCATGGCAAACCTTCACGGCAGTCCTCACTGGAGTGGGGAAGGCAAGGTGAGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
3UTR-3UTR TCA 90 bp GCCTCACCTTGCCTTCCCCACTCCAGTGAGGACTGCCGTGAAGGTTTGCCATGGGAAGAGGATGAGTTGTaGAGCAGCATATGGTTGGTG +
Preference number: 2 (lower is better)
Translates to: ASPCLPHSSEDCREGLPWEEDEL*SSIWLV
Trigger: CACCAACCATATGCTGCTTCACAACTCATCCTCTTC...CCATGGCAAACCTTCACGGCAGTCCTCACTGGAGTGGGGAAGGCAAGGTGAGGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
3UTR-3UTR GCA 90 bp CCCCCTCGCTGTCCCTCCTCCGTTTCTCCATGGTACTCAGGAAGTTCTCCTTTTTCCTTCCTGAAGACCTaGTTGAGCACCAGGCTCAGG +
Preference number: 2 (lower is better)
Translates to: PPRCPSSVSPWYSGSSPFSFLKT*LSTRLR
Trigger: CCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGA...AAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAGCGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR-3UTR CCA 90 bp AACCACAGTTCTGAGAGCTTGAGTAGGTGCCTCCTGGAGCCAGTGTATCCGTCAGGGCGGGGCCAGAGCTaGTCTTCCATGGTATTCAAC +
Preference number: 2 (lower is better)
Translates to: NHSSESLSRCLLEPVYPSGRGQS*SSMVFN
Trigger: GTTGAATACCATGGAAGACCAGCTCTGGCCCCGCCC...TGACGGATACACTGGCTCCAGGAGGCACCTACTCAAGCTCTCAGAACTGTGGTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR-3UTR GCA 90 bp CCCACTCCAGTGAGGACTGCCGTGAAGGTTTGCCATGGTCATTTACATTTGTCAACCCCCAGAAACCAATaGAGCCCCAGCACTGGGCCT +
Preference number: 2 (lower is better)
Translates to: PTPVRTAVKVCHGHLHLSTPRNQ*SPSTGP
Trigger: AGGCCCAGTGCTGGGGCTGCATTGGTTTCTGGGGGT...TGACAAATGTAAATGACCATGGCAAACCTTCACGGCAGTCCTCACTGGAGTGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
3UTR-3UTR GCA 90 bp CCCCTCGCTGTCCCTCCTCCGTTTCTCCATGGTACTCAGGAAGTTCTCCTTTTGCTTCCAGAACATGTCTaGATTGCCTTGCACCACCTG +
Preference number: 2 (lower is better)
Translates to: PLAVPPPFLHGTQEVLLLLPEHV*IALHHL
Trigger: CAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAG...CAAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAGCGAGGGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR CAA 90 bp GCTGTCCCTCCTCCGTTTCTCCATGGTACTCAGGAAGTTCTCCTTTaGAACCGTTTCCCAGGTAATGATCTTCTGGTCCAAGGGGTCAGG +
Preference number: 2 (lower is better)
Translates to: AVPPPFLHGTQEVLL*NRFPGNDLLVQGVR
Trigger: CCTGACCCCTTGGACCAGAAGATCATTACCTGGGAAACGGTTCAAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAGC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR CAA 90 bp GGCCAGAGCTGGTCTTCCATGGTATTCAACGATGAGGTGGTAGCGTaGAAACTTCCAGAACATGTCTGCATTGCCTTGCACCACCTGGAA +
Preference number: 2 (lower is better)
Translates to: GQSWSSMVFNDEVVA*KLPEHVCIALHHLE
Trigger: TTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAACGCTACCACCTCATCGTTGAATACCATGGAAGACCAGCTCTGGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR-3UTR CCA 90 bp CCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAAAAATCTTGCTTGAAGACCATTTCTTaGGGCTGCTGGGAGTGGGGG +
Preference number: 2 (lower is better)
Translates to: PAVQSKPVKALVGHEKSCLKTIS*GCWEWG
Trigger: CCCCCACTCCCAGCAGCCCCAAGAAATGGTCTTCAA...GCAAGATTTTTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
3UTR-3UTR CCA 90 bp ATTGTGTGGCTTTTTCCGGGCCCCACTCAAAGAGTTCTGTCCAAACAGTCCTGGCATATGGTTGGTGTCTaGCTGTGTCTCCAGGACTTG +
Preference number: 2 (lower is better)
Translates to: IVWLFPGPTQRVLSKQSWHMVGV*LCLQDL
Trigger: CAAGTCCTGGAGACACAGCCAGACACCAACCATATG...CCAGGACTGTTTGGACAGAACTCTTTGAGTGGGGCCCGGAAAAAGCCACACAAT
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
3UTR CAA 90 bp ACTCCAGTGAGGACTGCCGTGAAGGTTTGCCATGGTCATTTACATTaGTCACTGATGAAACTACCCAGAGGGACTGGGCTCTTAGCTGTG +
Preference number: 2 (lower is better)
Translates to: TPVRTAVKVCHGHLH*SLMKLPRGTGLLAV
Trigger: CACAGCTAAGAGCCCAGTCCCTCTGGGTAGTTTCATCAGTGACAAATGTAAATGACCATGGCAAACCTTCACGGCAGTCCTCACTGGAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
3UTR-3UTR TCA 90 bp AACCACAGTTCTGAGAGCTTGAGTAGGTGCCTCCTGGAGCCAGTGTATCCGTCAGTGATTCCAGACACTTaGTCCTCTTTTCTTGCTCTC +
Preference number: 2 (lower is better)
Translates to: NHSSESLSRCLLEPVYPSVIPDT*SSFLAL
Trigger: GAGAGCAAGAAAAGAGGATCAAGTGTCTGGAATCAC...TGACGGATACACTGGCTCCAGGAGGCACCTACTCAAGCTCTCAGAACTGTGGTT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR-3UTR CCA 90 bp TTGAGGTGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCGATGTGGCCAGGTCTaGGGCTCTAGAGCAAGTGGT +
Preference number: 2 (lower is better)
Translates to: LRWSTGFIESKVALGTLERCGQV*GSRASG
Trigger: ACCACTTGCTCTAGAGCCCCAGACCTGGCCACATCG...CTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCACCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
3UTR-3UTR GCA 90 bp ATTGTGTGGCTTTTTCCGGGCCCCACTCAAAGAGTTCTGTCCAAACAGTCCTGGACTGCCGTGAAGGTTTaGCATGGTCATTTACATTTG +
Preference number: 2 (lower is better)
Translates to: IVWLFPGPTQRVLSKQSWTAVKV*HGHLHL
Trigger: CAAATGTAAATGACCATGGCAAACCTTCACGGCAGT...CCAGGACTGTTTGGACAGAACTCTTTGAGTGGGGCCCGGAAAAAGCCACACAAT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
3UTR-3UTR CCA 90 bp TTGAGGTGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGATTTCTTGGGGCTGCTaGGAGTGGGGGAAGGTTGAT +
Preference number: 2 (lower is better)
Translates to: LRWSTGFIESKVALGTLEISWGC*EWGKVD
Trigger: ATCAACCTTCCCCCACTCCCAGCAGCCCCAAGAAAT...CTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCACCTCAA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
3UTR-3UTR TCA 90 bp ATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGAGTTTCATTCTCTTAGGTCTGTAGCAAGGCCTTaGAGACCATTTCTTGGGGCT +
Preference number: 2 (lower is better)
Translates to: ILLRLPNRCQRHEFHSLRSVARP*RPFLGA
Trigger: AGCCCCAAGAAATGGTCTTCAAGGCCTTGCTACAGA...CCTAAGAGAATGAAACTCATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
3UTR-3UTR GCA 90 bp TGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATACCATTTCTTGGGGCTaGTGGGAGTGGGGGAAGGTT +
Preference number: 2 (lower is better)
Translates to: WSTGFIESKVALGTLEQYTISWG*WEWGKV
Trigger: AACCTTCCCCCACTCCCAGCAGCCCCAAGAAATGGT...ATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
3UTR-3UTR GCA 90 bp TTGAGGTGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGAGGCTCCCGAATAGATaGCAAAGACATGAGTTTCAT +
Preference number: 2 (lower is better)
Translates to: LRWSTGFIESKVALGTLERLPNR*QRHEFH
Trigger: ATGAAACTCATGTCTTTGGCATCTATTCGGGAGCCT...CTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCACCTCAA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
3UTR GCA 72 bp TCTGTCCAAACAGTCCTGGGCAGCCAACTACAGGACTaGATCTCTGGCAGCCTCACCTTGCCTTCCCCACTC +
Preference number: 3 (lower is better)
Translates to: SVQTVLGSQLQD*ISGSLTLPSPL
Trigger: GAGTGGGGAAGGCAAGGTGAGGCTGCCAGAGATGCAGTCCTGTAGTTGGCTGCCCAGGACTGTTTGGACAGA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
3UTR CCA 72 bp CGTGGCTCCGCCTTTTCCTTTTTCGTCATTTCTGGGTaGGTTTCCGTGTGCGCTCCGGGTTGGCACGCTTGT +
Preference number: 3 (lower is better)
Translates to: RGSAFSFFVISG*VSVCAPGWHAC
Trigger: ACAAGCGTGCCAACCCGGAGCGCACACGGAAACCCACCCAGAAATGACGAAAAAGGAAAAGGCGGAGCCACG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148715.8
3UTR CCA 72 bp GCACCTCCCCCTCGCTGTCCCTCCTCCGTTTCTCCATaGTACTCAGGAAGTTCTCCTTTTGAACCGTTTCCC +
Preference number: 3 (lower is better)
Translates to: APPPRCPSSVSP*YSGSSPFEPFP
Trigger: GGGAAACGGTTCAAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAGCGAGGGGGAGGTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR GCA 72 bp GGGTCAGGCAAGTCTCTCTCCAGATGTTGTCGCTTATaGTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACC +
Preference number: 3 (lower is better)
Translates to: GSGKSLSRCCRL*WASFLKTCLST
Trigger: GGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAAGCGACAACATCTGGAGAGAGACTTGCCTGACCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR CCA 72 bp GAAGTGATCTGTAGCAAGGCCTTGAAGACCATTTCTTaGGGCTGCTGGGAGTGGGGGAAGGTTGATGTGCCC +
Preference number: 3 (lower is better)
Translates to: EVICSKALKTIS*GCWEWGKVDVP
Trigger: GGGCACATCAACCTTCCCCCACTCCCAGCAGCCCCAAGAAATGGTCTTCAAGGCCTTGCTACAGATCACTTC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
3UTR-3UTR CAA 90 bp TTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGCATGTCTGCATTGCCTaGCACCACCTGGAATGTGTA +
Preference number: 3 (lower is better)
Translates to: LCWASFLKTCLSTRLRWLHVCIA*HHLECV
Trigger: TACACATTCCAGGTGGTGCAAGGCAATGCAGACATG...CAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR-3UTR CAA 90 bp TTGGCAATCAAGTCCACTCTGTGTGCCGTTTTCCTCAGCACCTCCCCCTCGCTGCAGAACATGTCTGCATaGCCTTGCACCACCTGGAAT +
Preference number: 3 (lower is better)
Translates to: LAIKSTLCAVFLSTSPSLQNMSA*PCTTWN
Trigger: ATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTG...CAGCGAGGGGGAGGTGCTGAGGAAAACGGCACACAGAGTGGACTTGATTGCCAA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR GCA 72 bp GCAGCCTCACCTTGCCTTCCCCACTCCAGTGAGGACTaGCGTGAAGGTTTGCCATGGTCATTTACATTTGTC +
Preference number: 3 (lower is better)
Translates to: AASPCLPHSSED*REGLPWSFTFV
Trigger: GACAAATGTAAATGACCATGGCAAACCTTCACGGCAGTCCTCACTGGAGTGGGGAAGGCAAGGTGAGGCTGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
3UTR-3UTR CAA 90 bp TCGCTTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGATGAGGTGGTAGCGTaGAAACTTCCAGAACATGTC +
Preference number: 3 (lower is better)
Translates to: SLMLGFLPEDLLEHQAQVDEVVA*KLPEHV
Trigger: GACATGTTCTGGAAGTTTCAACGCTACCACCTCATC...CACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAAGCGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR TCA 72 bp GCGGGGCCAGAGCTGGTCTTCCATGGTATTCAACGATaGGGTGGTAGCGTTGAAACTTCCAGAACATGTCTG +
Preference number: 3 (lower is better)
Translates to: AGPELVFHGIQR*GGSVETSRTCL
Trigger: CAGACATGTTCTGGAAGTTTCAACGCTACCACCTCATCGTTGAATACCATGGAAGACCAGCTCTGGCCCCGC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR TCA 72 bp CTGGGCCTGTACAGACCACAGGTTATAGGAAGAGGATaGGTTGTGAAGCAGCATATGGTTGGTGTCTGGCTG +
Preference number: 3 (lower is better)
Translates to: LGLYRPQVIGRG*VVKQHMVGVWL
Trigger: CAGCCAGACACCAACCATATGCTGCTTCACAACTCATCCTCTTCCTATAACCTGTGGTCTGTACAGGCCCAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
3UTR-3UTR CAA 90 bp TTGAGGTGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCTTGAAGACCATTTCTaGGGGCTGCTGGGAGTGGGG +
Preference number: 3 (lower is better)
Translates to: LRWSTGFIESKVALGTLELEDHF*GLLGVG
Trigger: CCCCACTCCCAGCAGCCCCAAGAAATGGTCTTCAAG...CTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCACCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
3UTR-3UTR CAA 90 bp CCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAAAAATCTTGCATCTGTAGCAAGGCCTaGAAGACCATTTCTTGGGGC +
Preference number: 3 (lower is better)
Translates to: PAVQSKPVKALVGHEKSCICSKA*KTISWG
Trigger: GCCCCAAGAAATGGTCTTCAAGGCCTTGCTACAGAT...GCAAGATTTTTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
3UTR-3UTR CAA 90 bp ATTGTGTGGCTTTTTCCGGGCCCCACTCAAAGAGTTCTGTCCAAACAGTCCTGGGACTGCCGTGAAGGTTaGCCATGGTCATTTACATTT +
Preference number: 3 (lower is better)
Translates to: IVWLFPGPTQRVLSKQSWDCREG*PWSFTF
Trigger: AAATGTAAATGACCATGGCAAACCTTCACGGCAGTC...CCAGGACTGTTTGGACAGAACTCTTTGAGTGGGGCCCGGAAAAAGCCACACAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
3UTR GCA 72 bp AAGCCAGTGAAAGCTTTAGTGGGACATGAAAAATCTTaGCCTGCTGGAGAGGATACTTCTGAGGCTCCCGAA +
Preference number: 3 (lower is better)
Translates to: KPVKALVGHEKS*PAGEDTSEAPE
Trigger: TTCGGGAGCCTCAGAAGTATCCTCTCCAGCAGGGCAAGATTTTTCATGTCCCACTAAAGCTTTCACTGGCTT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp GCTGAGCAGGATGAAGGGCGGGGCCAGAGCTGGTCTTCCATGGTATTCAACGATAGCTCCCGAGCCTGCTaGGCACCCAGGCCGGCCAGT +
Preference number: 4 (lower is better)
Translates to: AEQDEGRGQSWSSMVFNDSSRAC*APRPAS
Trigger: ACTGGCCGGCCTGGGTGCCCAGCAGGCTCGGGAGCT...ATCGTTGAATACCATGGAAGACCAGCTCTGGCCCCGCCCTTCATCCTGCTCAGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp ATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGAGCGGCCCCTGGGGTGGTaGCCTGAAGTCCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: MLGFLPEDLLEHQAQVAERPLGW*PEVHQQ
Trigger: CTGCTGGTGGACTTCAGGCCACCACCCCAGGGGCCG...CTCAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCAT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp TCGCTTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGCAGCCACTTCTGGCCTaGGGGCCGCTTAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: SLMLGFLPEDLLEHQAQVQPLLA*GPLRWP
Trigger: GGGCCACCTAAGCGGCCCGCAGGCCAGAAGTGGCTG...CACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp TCAAGTCCACTCTGTGTGCCGTTTTCCTCAGCACCTCCCCCTCGCTGTCCCTCCGCTTCAGTGGCCAGGTaGAGGCACGTGGTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: SSPLCVPFSSAPPPRCPSASVAR*RHVVLL
Trigger: GAGCAGGACCACGTGCCTGCACCTGGCCACTGAAGC...GGAGGGACAGCGAGGGGGAGGTGCTGAGGAAAACGGCACACAGAGTGGACTTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp ATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGAGCACCAGGTTGGGGGCTaGCAGGTGCCACTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: MLGFLPEDLLEHQAQVAEHQVGG*QVPLGE
Trigger: CTCACCGAGTGGCACCTGCCAGCCCCCAACCTGGTG...CTCAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCAT
62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp ATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGAGTGCCAGGATCAGCCATaGGGCAGCCTGCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: MLGFLPEDLLEHQAQVAECQDQP*GSLLHC
Trigger: GCAGTGGAGCAGGCTGCCCCATGGCTGATCCTGGCA...CTCAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCAT
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp TCAAGTCCACTCTGTGTGCCGTTTTCCTCAGCACCTCCCCCTCGCTGTCCCTCCGGAGACCTCGTGGAGTaGGAAGGCAGGCAGACCAAT +
Preference number: 4 (lower is better)
Translates to: SSPLCVPFSSAPPPRCPSGDLVE*EGRQTN
Trigger: ATTGGTCTGCCTGCCTTCTCACTCCACGAGGTCTCC...GGAGGGACAGCGAGGGGGAGGTGCTGAGGAAAACGGCACACAGAGTGGACTTGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp TTGGCAATCAAGTCCACTCTGTGTGCCGTTTTCCTCAGCACCTCCCCCTCGCTGCCTGGGGTGGTGGCCTaGAGTCCACCAGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: LAIKSTLCAVFLSTSPSLPGVVA*SPPAGH
Trigger: ATGTCCTGCTGGTGGACTTCAGGCCACCACCCCAGG...CAGCGAGGGGGAGGTGCTGAGGAAAACGGCACACAGAGTGGACTTGATTGCCAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp ATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGAGGCAGGCACGTGGTCCTaGTCCAGCTGTGGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: MLGFLPEDLLEHQAQVAEAGTWS*SSCGSF
Trigger: GAAGGAACCACAGCTGGAGCAGGACCACGTGCCTGC...CTCAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp GCTGAGCAGGATGAAGGGCGGGGCCAGAGCTGGTCTTCCATGGTATTCAACGATGCCGTAGGATGGGTGTaGCTGTGGCCATGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: AEQDEGRGQSWSSMVFNDAVGWV*LWPCLP
Trigger: GGGGAGACATGGCCACAGGCACACCCATCCTACGGC...ATCGTTGAATACCATGGAAGACCAGCTCTGGCCCCGCCCTTCATCCTGCTCAGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp TTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGCACCCTCCCGGCCCATaGCCCAGAAGTATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: LCWASFLKTCLSTRLRWLHPPGP*PRSMWP
Trigger: TGGCCACATACTTCTGGGCCATGGGCCGGGAGGGTG...CAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp ATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGAGGTCCTGCTCCAGCTGTaGTTCCTTCGCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: MLGFLPEDLLEHQAQVAEVLLQL*FLRTSR
Trigger: CCTGCTGGTGCGAAGGAACCACAGCTGGAGCAGGAC...CTCAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp ATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGAGTGGCATCAGCTTCAGTaGCCAGGTGCAGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: MLGFLPEDLLEHQAQVAEWHQLQ*PGAGTW
Trigger: CCACGTGCCTGCACCTGGCCACTGAAGCTGATGCCA...CTCAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCAT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp CCCCTCGCTGTCCCTCCTCCGTTTCTCCATGGTACTCAGGAAGTTCTCCTTTTGTTGGGGGCTGGCAGGTaGCACTCGGTGAGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: PLAVPPPFLHGTQEVLLLLGAGR*HSVSRS
Trigger: ACTCCTGCTCACCGAGTGGCACCTGCCAGCCCCCAA...CAAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAGCGAGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp TCAAGTCCACTCTGTGTGCCGTTTTCCTCAGCACCTCCCCCTCGCTGTCCCTCCCCACGGCAGGCGTCATaGAGGAAGTCTTTGAGTACG +
Preference number: 4 (lower is better)
Translates to: SSPLCVPFSSAPPPRCPSPRQAS*RKSLST
Trigger: CGTACTCAAAGACTTCCTGCATGACGCCTGCCGTGG...GGAGGGACAGCGAGGGGGAGGTGCTGAGGAAAACGGCACACAGAGTGGACTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp GTCCTGCCCTCTAGGAGCTGGTCAGCTAATGAGTGGGTCAGGGGTCAGAAAGAAGGTGCGGGCCACCTCTaGCTCTTTCTCCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VLPSRSWSANEWVRGQKEGAGHL*LFLQVG
Trigger: TCCCACCTGGAGAAAGAGGCAGAGGTGGCCCGCACC...TTCTTTCTGACCCCTGACCCACTCATTAGCTGACCAGCTCCTAGAGGGCAGGAC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp TTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGCTCCCCTGCATAGGATaGGCTCCCAGCCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: LCWASFLKTCLSTRLRWLLPCIG*APSHPQ
Trigger: CTGAGGATGGCTGGGAGCCCATCCTATGCAGGGGAG...CAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp GATGAAGGGCGGGGCCAGAGCTGGTCTTCCATGGTATTCAACGATGAGGTGGTATGCGGGCCGCTTAGGTaGCCCTCTCTCCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: DEGRGQSWSSMVFNDEVVCGPLR*PSLLHP
Trigger: AGGATGGAGGAGAGAGGGCCACCTAAGCGGCCCGCA...TACCACCTCATCGTTGAATACCATGGAAGACCAGCTCTGGCCCCGCCCTTCATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp CCCCCTCGCTGTCCCTCCTCCGTTTCTCCATGGTACTCAGGAAGTTCTCCTTTTTCTGGCAGCCACTTCTaGCCTGCGGGCCGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: PPRCPSSVSPWYSGSSPFSGSHF*PAGRLG
Trigger: ACCTAAGCGGCCCGCAGGCCAGAAGTGGCTGCCAGA...AAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAGCGAGGGGG
59% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp TCAAGTCCACTCTGTGTGCCGTTTTCCTCAGCACCTCCCCCTCGCTGTCCCTCCGCAGGTCCAGCCCACTaGACACAGCAGCAAAATACC +
Preference number: 4 (lower is better)
Translates to: SSPLCVPFSSAPPPRCPSAGPAH*TQQQNT
Trigger: GGTATTTTGCTGCTGTGTCCAGTGGGCTGGACCTGC...GGAGGGACAGCGAGGGGGAGGTGCTGAGGAAAACGGCACACAGAGTGGACTTGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp CCCCTCGCTGTCCCTCCTCCGTTTCTCCATGGTACTCAGGAAGTTCTCCTTTTGTTCTCCAGGCTCAGCTaGAGCTCTGTCAGCCCGTCG +
Preference number: 4 (lower is better)
Translates to: PLAVPPPFLHGTQEVLLLFSRLS*SSVSPS
Trigger: CGACGGGCTGACAGAGCTGCAGCTGAGCCTGGAGAA...CAAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAGCGAGGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp GTCCTGCCCTCTAGGAGCTGGTCAGCTAATGAGTGGGTCAGGGGTCAGAAAGAACTCTCTCCTCCATCCTaGGCCCGTCCTGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: VLPSRSWSANEWVRGQKELSPPS*ARPGRS
Trigger: GCTTCTACCAGGACGGGCGCAGGATGGAGGAGAGAG...TTCTTTCTGACCCCTGACCCACTCATTAGCTGACCAGCTCCTAGAGGGCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp GATGAAGGGCGGGGCCAGAGCTGGTCTTCCATGGTATTCAACGATGAGGTGGTACTCTCTCCTCCATCCTaGGCCCGTCCTGGTAGAAGC +
Preference number: 4 (lower is better)
Translates to: DEGRGQSWSSMVFNDEVVLSPPS*ARPGRS
Trigger: GCTTCTACCAGGACGGGCGCAGGATGGAGGAGAGAG...TACCACCTCATCGTTGAATACCATGGAAGACCAGCTCTGGCCCCGCCCTTCATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp GTCCTGCCCTCTAGGAGCTGGTCAGCTAATGAGTGGGTCAGGGGTCAGAAAGAACTCCCCTGCATAGGATaGGCTCCCAGCCATCCTCAG +
Preference number: 4 (lower is better)
Translates to: VLPSRSWSANEWVRGQKELPCIG*APSHPQ
Trigger: CTGAGGATGGCTGGGAGCCCATCCTATGCAGGGGAG...TTCTTTCTGACCCCTGACCCACTCATTAGCTGACCAGCTCCTAGAGGGCAGGAC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp TCGCTTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGCTTCCTACTGAGGTCTaGCAGCCACTTCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: SLMLGFLPEDLLEHQAQVLPTEV*QPLLAC
Trigger: GCAGGCCAGAAGTGGCTGCCAGACCTCAGTAGGAAG...CACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAAGCGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp TTGGCAATCAAGTCCACTCTGTGTGCCGTTTTCCTCAGCACCTCCCCCTCGCTGCCAGAAGCCGTAGGATaGGTGTGCCTGTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: LAIKSTLCAVFLSTSPSLPEAVG*VCLWPC
Trigger: ACATGGCCACAGGCACACCCATCCTACGGCTTCTGG...CAGCGAGGGGGAGGTGCTGAGGAAAACGGCACACAGAGTGGACTTGATTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp GCTGAGCAGGATGAAGGGCGGGGCCAGAGCTGGTCTTCCATGGTATTCAACGATTGTGTAGATGAGGGCTaGGCAGGTGAAGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: AEQDEGRGQSWSSMVFNDCVDEG*AGEGTQ
Trigger: CTGGGTGCCTTCACCTGCCCAGCCCTCATCTACACA...ATCGTTGAATACCATGGAAGACCAGCTCTGGCCCCGCCCTTCATCCTGCTCAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp TTGGCAATCAAGTCCACTCTGTGTGCCGTTTTCCTCAGCACCTCCCCCTCGCTGGCAGCAGGGCCTGAGTaGTCACACCATAGGCCACAA +
Preference number: 4 (lower is better)
Translates to: LAIKSTLCAVFLSTSPSLAAGPE*SHHRPQ
Trigger: TTGTGGCCTATGGTGTGACCACTCAGGCCCTGCTGC...CAGCGAGGGGGAGGTGCTGAGGAAAACGGCACACAGAGTGGACTTGATTGCCAA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp GTCCTGCCCTCTAGGAGCTGGTCAGCTAATGAGTGGGTCAGGGGTCAGAAAGAAACTCCCAAGGGCGCCTaGCTCCACAAGGATGAAGTG +
Preference number: 4 (lower is better)
Translates to: VLPSRSWSANEWVRGQKETPKGA*LHKDEV
Trigger: CACTTCATCCTTGTGGAGTCAGGCGCCCTTGGGAGT...TTCTTTCTGACCCCTGACCCACTCATTAGCTGACCAGCTCCTAGAGGGCAGGAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp CCCCCTCGCTGTCCCTCCTCCGTTTCTCCATGGTACTCAGGAAGTTCTCCTTTTACTTCCTCCACCGTGTaGGCAGGAAGGCAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: PPRCPSSVSPWYSGSSPFTSSTV*AGRQLV
Trigger: CACAAGCTGCCTTCCTGCTCACACGGTGGAGGAAGT...AAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAGCGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp ATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGAGGCACCTTCACAAACTTaGCTCGCTTCTTCCCAGACC +
Preference number: 4 (lower is better)
Translates to: MLGFLPEDLLEHQAQVAEAPSQT*LASSQT
Trigger: GGTCTGGGAAGAAGCGAGGCAAGTTTGTGAAGGTGC...CTCAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCAT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp TGGCCAGATCCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAATTGGGGGCTGGCAGGTaGCACTCGGTGAGCAGGAGT +
Preference number: 4 (lower is better)
Translates to: WPDPAVQSKPVKALVGHELGAGR*HSVSRS
Trigger: ACTCCTGCTCACCGAGTGGCACCTGCCAGCCCCCAA...TTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGGATCTGGCCA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp TTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGGGATCCAGGCACCTGTaGTCTGAGCTGCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: LCWASFLKTCLSTRLRWLGSRHL*SELLSP
Trigger: TGGTGAAAGCAGCTCAGAGCACAGGTGCCTGGATCC...CAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp TTGGCAATCAAGTCCACTCTGTGTGCCGTTTTCCTCAGCACCTCCCCCTCGCTGGGGGTCCCTGAATGTTaGCCTCATCTGCTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: LAIKSTLCAVFLSTSPSLGVPEC*PHLLGS
Trigger: ACTACCCAGCAGATGAGGGCAACATTCAGGGACCCC...CAGCGAGGGGGAGGTGCTGAGGAAAACGGCACACAGAGTGGACTTGATTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp TTGGCAATCAAGTCCACTCTGTGTGCCGTTTTCCTCAGCACCTCCCCCTCGCTGGGACAGGTATCTGGATaGAGCTGGTGCCCCCATAAC +
Preference number: 4 (lower is better)
Translates to: LAIKSTLCAVFLSTSPSLGQVSG*SWCPHN
Trigger: GTTATGGGGGCACCAGCTGCATCCAGATACCTGTCC...CAGCGAGGGGGAGGTGCTGAGGAAAACGGCACACAGAGTGGACTTGATTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp CCCCCTCGCTGTCCCTCCTCCGTTTCTCCATGGTACTCAGGAAGTTCTCCTTTTAATGCCACCAGAACCTaGCAGGATCAGCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: PPRCPSSVSPWYSGSSPFNATRT*QDQPWG
Trigger: GCCCCATGGCTGATCCTGGCAGGTTCTGGTGGCATT...AAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAGCGAGGGGG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp TGGCCAGATCCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAATGGCCTCACGCATGGTaGGGGCCACCTCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: WPDPAVQSKPVKALVGHEWPHAW*GPPLPL
Trigger: AAGAGGCAGAGGTGGCCCGCACCATGCGTGAGGCCA...TTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGGATCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp TCGCTTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGTATCTGGATGCAGCTaGTGCCCCCATAACCTGTCC +
Preference number: 4 (lower is better)
Translates to: SLMLGFLPEDLLEHQAQVVSGCS*CPHNLS
Trigger: GGACAGGTTATGGGGGCACCAGCTGCATCCAGATAC...CACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAAGCGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp TTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGCAAAGGACAGGTATCTaGATGCAGCTGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: LCWASFLKTCLSTRLRWLQRTGI*MQLVPP
Trigger: TGGGGGCACCAGCTGCATCCAGATACCTGTCCTTTG...CAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp TGTGGGAACCGTGGCTCCGCCTTTTCCTTTTTCGTCATTTCTGGGTGGGTTTCCAGCACCAGGCTCAGGTaGCTGAGCAGGATGAAGGGC +
Preference number: 4 (lower is better)
Translates to: CGNRGSAFSFFVISGWVSSTRLR*LSRMKG
Trigger: GCCCTTCATCCTGCTCAGCCACCTGAGCCTGGTGCT...GGAAACCCACCCAGAAATGACGAAAAAGGAAAAGGCGGAGCCACGGTTCCCACA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148715.8
CDS-3UTR TCA 90 bp CCCCCTCGCTGTCCCTCCTCCGTTTCTCCATGGTACTCAGGAAGTTCTCCTTTTGCAGGTGCCACTCGGTaGGCAGGAGTTCAAAAAGCA +
Preference number: 4 (lower is better)
Translates to: PPRCPSSVSPWYSGSSPFAGATR*AGVQKA
Trigger: TGCTTTTTGAACTCCTGCTCACCGAGTGGCACCTGC...AAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAGCGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp TTGAACCGTTTCCCAGGTAATGATCTTCTGGTCCAAGGGGTCAGGCAAGTCTCTCAGGCACCTGTGCTCTaGGCTGCTTTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: LNRFPGNDLLVQGVRQVSQAPVL*AAFTSP
Trigger: GGGGCTGGTGAAAGCAGCTCAGAGCACAGGTGCCTG...AGAGACTTGCCTGACCCCTTGGACCAGAAGATCATTACCTGGGAAACGGTTCAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp GATGAAGGGCGGGGCCAGAGCTGGTCTTCCATGGTATTCAACGATGAGGTGGTACATGCAGGAAGTCTTTaGGTACGCGGGAGACCTCGT +
Preference number: 4 (lower is better)
Translates to: DEGRGQSWSSMVFNDEVVHAGSL*VRGRPR
Trigger: ACGAGGTCTCCCGCGTACTCAAAGACTTCCTGCATG...TACCACCTCATCGTTGAATACCATGGAAGACCAGCTCTGGCCCCGCCCTTCATC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp GTCCTGCCCTCTAGGAGCTGGTCAGCTAATGAGTGGGTCAGGGGTCAGAAAGAAGTTGCCGTAGCACTCTaGGAAAAGATCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: VLPSRSWSANEWVRGQKEVAVAL*EKIQGQ
Trigger: CTGGCCCTGGATCTTTTCTCAGAGTGCTACGGCAAC...TTCTTTCTGACCCCTGACCCACTCATTAGCTGACCAGCTCCTAGAGGGCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp TCGCTTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGCTTGGCTGTGGCTCTTaGAGGCTTTCACAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: SLMLGFLPEDLLEHQAQVLGCGS*RLSQVP
Trigger: AGGCACTTGTGAAAGCCTGCAAGAGCCACAGCCAAG...CACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAAGCGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp GTCCTGCCCTCTAGGAGCTGGTCAGCTAATGAGTGGGTCAGGGGTCAGAAAGAACCACGGCAGGCGTCATaGAGGAAGTCTTTGAGTACG +
Preference number: 4 (lower is better)
Translates to: VLPSRSWSANEWVRGQKEPRQAS*RKSLST
Trigger: CGTACTCAAAGACTTCCTGCATGACGCCTGCCGTGG...TTCTTTCTGACCCCTGACCCACTCATTAGCTGACCAGCTCCTAGAGGGCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp GATGAAGGGCGGGGCCAGAGCTGGTCTTCCATGGTATTCAACGATGAGGTGGTATCTAGGTCCATCCTCTaGGGGGCATCCTCACTGAAG +
Preference number: 4 (lower is better)
Translates to: DEGRGQSWSSMVFNDEVVSRSIL*GASSLK
Trigger: CTTCAGTGAGGATGCCCCGCAGAGGATGGACCTAGA...TACCACCTCATCGTTGAATACCATGGAAGACCAGCTCTGGCCCCGCCCTTCATC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp GTCCTGCCCTCTAGGAGCTGGTCAGCTAATGAGTGGGTCAGGGGTCAGAAAGAATCCTTCCTGAAGACCTaGTTGAGCACCAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: VLPSRSWSANEWVRGQKESFLKT*LSTRLR
Trigger: CCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGA...TTCTTTCTGACCCCTGACCCACTCATTAGCTGACCAGCTCCTAGAGGGCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp TGGCTCCGCCTTTTCCTTTTTCGTCATTTCTGGGTGGGTTTCCGTGTGCGCTCCTCCTTCCTGAAGACCTaGTTGAGCACCAGGCTCAGG +
Preference number: 4 (lower is better)
Translates to: WLRLFLFRHFWVGFRVRSSFLKT*LSTRLR
Trigger: CCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGA...GGAGCGCACACGGAAACCCACCCAGAAATGACGAAAAAGGAAAAGGCGGAGCCA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148715.8
CDS-3UTR CCA 90 bp CCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAAAAATCTTGCCACCAGGTTGGGGGCTaGCAGGTGCCACTCGGTGAG +
Preference number: 4 (lower is better)
Translates to: PAVQSKPVKALVGHEKSCHQVGG*QVPLGE
Trigger: CTCACCGAGTGGCACCTGCCAGCCCCCAACCTGGTG...GCAAGATTTTTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp GTCCTGCCCTCTAGGAGCTGGTCAGCTAATGAGTGGGTCAGGGGTCAGAAAGAAGTATCTGGATGCAGCTaGTGCCCCCATAACCTGTCC +
Preference number: 4 (lower is better)
Translates to: VLPSRSWSANEWVRGQKEVSGCS*CPHNLS
Trigger: GGACAGGTTATGGGGGCACCAGCTGCATCCAGATAC...TTCTTTCTGACCCCTGACCCACTCATTAGCTGACCAGCTCCTAGAGGGCAGGAC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp ACCCTTGAGCAATATCTTGGGGTTTCTGCCAGAATGATCAGACAGATAATGCTGAGCTCCCGAGCCTGCTaGGCACCCAGGCCGGCCAGT +
Preference number: 4 (lower is better)
Translates to: TLEQYLGVSARMIRQIMLSSRAC*APRPAS
Trigger: ACTGGCCGGCCTGGGTGCCCAGCAGGCTCGGGAGCT...CAGCATTATCTGTCTGATCATTCTGGCAGAAACCCCAAGATATTGCTCAAGGGT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp CTTGCCCTGCTGGAGAGGATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGTCCTGCTCCAGCTGTaGTTCCTTCGCACCAGCAGG +
Preference number: 4 (lower is better)
Translates to: LALLERILLRLPNRCQRHVLLQL*FLRTSR
Trigger: CCTGCTGGTGCGAAGGAACCACAGCTGGAGCAGGAC...ATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTATCCTCTCCAGCAGGGCAAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp CCCCCTCGCTGTCCCTCCTCCGTTTCTCCATGGTACTCAGGAAGTTCTCCTTTTGCTTGCACACCGTCATaGGCAAAGAAGGCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: PPRCPSSVSPWYSGSSPFACTPS*AKKALA
Trigger: TGCCAAGGCCTTCTTTGCCCATGACGGTGTGCAAGC...AAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAGCGAGGGGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp CTTGCCCTGCTGGAGAGGATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGGATGGGTGTGCCTGTaGCCATGTCTCCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: LALLERILLRLPNRCQRHGWVCL*PCLPTR
Trigger: TCTGGTGGGGAGACATGGCCACAGGCACACCCATCC...ATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTATCCTCTCCAGCAGGGCAAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp GTCCTGCCCTCTAGGAGCTGGTCAGCTAATGAGTGGGTCAGGGGTCAGAAAGAAGTTAGCTTCTCCAATTaGCCACCCCGGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: VLPSRSWSANEWVRGQKEVSFSN*PPRLHR
Trigger: CCTATGCAGCCGGGGTGGCCAATTGGAGAAGCTAAC...TTCTTTCTGACCCCTGACCCACTCATTAGCTGACCAGCTCCTAGAGGGCAGGAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp GTAGCGTTGAAACTTCCAGAACATGTCTGCATTGCCTTGCACCACCTGGAATGTAGACGGCCCCTGGGGTaGTGGCCTGAAGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: VALKLPEHVCIALHHLECRRPLG*WPEVHQ
Trigger: CTGGTGGACTTCAGGCCACCACCCCAGGGGCCGTCT...ACATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAACGCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp CTGGGCAGCCAACTACAGGACTGCATCTCTGGCAGCCTCACCTTGCCTTCCCCAGGAGCATACAGTAGTTaGCCTGTGATTCCAGACACT +
Preference number: 4 (lower is better)
Translates to: LGSQLQDCISGSLTLPSPGAYSS*PVIPDT
Trigger: AGTGTCTGGAATCACAGGCCAACTACTGTATGCTCC...TGGGGAAGGCAAGGTGAGGCTGCCAGAGATGCAGTCCTGTAGTTGGCTGCCCAG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
3UTR CAA 72 bp GGAAGGGATGTCCAAGAAGTGATCTGTAGCAAGGCCTaGAAGACCATTTCTTGGGGCTGCTGGGAGTGGGGG +
Preference number: 4 (lower is better)
Translates to: GRDVQEVICSKA*KTISWGCWEWG
Trigger: CCCCCACTCCCAGCAGCCCCAAGAAATGGTCTTCAAGGCCTTGCTACAGATCACTTCTTGGACATCCCTTCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp GGAGGTAATTACAATAGATCTGAGTCCTGCCCTCTAGGAGCTGGTCAGCTAATGCAGGCACCTGTGCTCTaGGCTGCTTTCACCAGCCCC +
Preference number: 4 (lower is better)
Translates to: GGNYNRSESCPLGAGQLMQAPVL*AAFTSP
Trigger: GGGGCTGGTGAAAGCAGCTCAGAGCACAGGTGCCTG...CATTAGCTGACCAGCTCCTAGAGGGCAGGACTCAGATCTATTGTAATTACCTCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp CCCCCTCGCTGTCCCTCCTCCGTTTCTCCATGGTACTCAGGAAGTTCTCCTTTTTGTTGGGGTCACCATTaGCCAACAGGCAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: PPRCPSSVSPWYSGSSPFCWGHH*PTGKGQ
Trigger: CTGTCCTTTGCCTGTTGGTCAATGGTGACCCCAACA...AAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAGCGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp TCGCTTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGTGGGGAATTTCTCTCTaGACTGCTTCTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: SLMLGFLPEDLLEHQAQVWGISL*TASQPP
Trigger: AGGTGGCTGAGAAGCAGTTCAGAGAGAAATTCCCCA...CACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp TCAAGTCCACTCTGTGTGCCGTTTTCCTCAGCACCTCCCCCTCGCTGTCCCTCCATTCCACGTCCCCATTaGAGATTTCACTCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: SSPLCVPFSSAPPPRCPSIPRPH*RFHSWQ
Trigger: TTGCCAAGAGTGAAATCTTCAATGGGGACGTGGAAT...GGAGGGACAGCGAGGGGGAGGTGCTGAGGAAAACGGCACACAGAGTGGACTTGA
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp TCGCTTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGGGACATTTCCTTTATaGTCTTGCAGGCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: SLMLGFLPEDLLEHQAQVGTFPL*SCRQPE
Trigger: CTCTGGCTGCCTGCAAGATCATAAAGGAAATGTCCC...CACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAAGCGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp AACCACAGTTCTGAGAGCTTGAGTAGGTGCCTCCTGGAGCCAGTGTATCCGTCAGTTGCCGTAGCACTCTaGGAAAAGATCCAGGGCCAG +
Preference number: 4 (lower is better)
Translates to: NHSSESLSRCLLEPVYPSVAVAL*EKIQGQ
Trigger: CTGGCCCTGGATCTTTTCTCAGAGTGCTACGGCAAC...TGACGGATACACTGGCTCCAGGAGGCACCTACTCAAGCTCTCAGAACTGTGGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp CCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAAAAATCTTGCCCTGGGGTGGTGGCCTaGAGTCCACCAGCAGGACAT +
Preference number: 4 (lower is better)
Translates to: PAVQSKPVKALVGHEKSCPGVVA*SPPAGH
Trigger: ATGTCCTGCTGGTGGACTTCAGGCCACCACCCCAGG...GCAAGATTTTTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp CCCCCTCGCTGTCCCTCCTCCGTTTCTCCATGGTACTCAGGAAGTTCTCCTTTTGCGTGTCCTCATCTGTaGAGAAGCCCTGTCGGATTT +
Preference number: 4 (lower is better)
Translates to: PPRCPSSVSPWYSGSSPFACPHL*RSPVGF
Trigger: AAATCCGACAGGGCTTCTTCACAGATGAGGACACGC...AAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAGCGAGGGGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp CCCCTCGCTGTCCCTCCTCCGTTTCTCCATGGTACTCAGGAAGTTCTCCTTTTGTCCAGCAGCAGAGGGTaGAGAGAACAGTTCACACGA +
Preference number: 4 (lower is better)
Translates to: PLAVPPPFLHGTQEVLLLSSSRG*REQFTR
Trigger: TCGTGTGAACTGTTCTCTTCACCCTCTGCTGCTGGA...CAAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGAGGGACAGCGAGGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp GTCCTGCCCTCTAGGAGCTGGTCAGCTAATGAGTGGGTCAGGGGTCAGAAAGAAGCACCTTCACAAACTTaGCTCGCTTCTTCCCAGACC +
Preference number: 4 (lower is better)
Translates to: VLPSRSWSANEWVRGQKEAPSQT*LASSQT
Trigger: GGTCTGGGAAGAAGCGAGGCAAGTTTGTGAAGGTGC...TTCTTTCTGACCCCTGACCCACTCATTAGCTGACCAGCTCCTAGAGGGCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp GCTGAGCAGGATGAAGGGCGGGGCCAGAGCTGGTCTTCCATGGTATTCAACGATGCAGGCTTTCACAAGTaGCTTGAGGATGACAGTGTC +
Preference number: 4 (lower is better)
Translates to: AEQDEGRGQSWSSMVFNDAGFHK*LEDDSV
Trigger: GACACTGTCATCCTCAAGGCACTTGTGAAAGCCTGC...ATCGTTGAATACCATGGAAGACCAGCTCTGGCCCCGCCCTTCATCCTGCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp GTAGCGTTGAAACTTCCAGAACATGTCTGCATTGCCTTGCACCACCTGGAATGTGGTGCGGGCCACCTCTaGCTCTTTCTCCAGGTGGGA +
Preference number: 4 (lower is better)
Translates to: VALKLPEHVCIALHHLECGAGHL*LFLQVG
Trigger: TCCCACCTGGAGAAAGAGGCAGAGGTGGCCCGCACC...ACATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAACGCTAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp GTAGCGTTGAAACTTCCAGAACATGTCTGCATTGCCTTGCACCACCTGGAATGTTGGCCTCACGCATGGTaGGGGCCACCTCTGCCTCTT +
Preference number: 4 (lower is better)
Translates to: VALKLPEHVCIALHHLECWPHAW*GPPLPL
Trigger: AAGAGGCAGAGGTGGCCCGCACCATGCGTGAGGCCA...ACATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAACGCTAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp CCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAAAAATCTTGCGCTTCAGTGGCCAGGTaGAGGCACGTGGTCCTGCTC +
Preference number: 4 (lower is better)
Translates to: PAVQSKPVKALVGHEKSCASVAR*RHVVLL
Trigger: GAGCAGGACCACGTGCCTGCACCTGGCCACTGAAGC...GCAAGATTTTTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGG
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp GCTGAGCAGGATGAAGGGCGGGGCCAGAGCTGGTCTTCCATGGTATTCAACGATAAGCTGTCTGGCTCCTaGAGATCTTCTAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: AEQDEGRGQSWSSMVFNDKLSGS*RSSRSI
Trigger: GATGGACCTAGAAGATCTGCAGGAGCCAGACAGCTT...ATCGTTGAATACCATGGAAGACCAGCTCTGGCCCCGCCCTTCATCCTGCTCAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp GAACCGTGGCTCCGCCTTTTCCTTTTTCGTCATTTCTGGGTGGGTTTCCGTGTGGGGACGTTGAGTAGGTaGCTCCTGGAGCCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: EPWLRLFLFRHFWVGFRVGTLSR*LLEPVY
Trigger: ATACACTGGCTCCAGGAGGCACCTACTCAACGTCCC...CACACGGAAACCCACCCAGAAATGACGAAAAAGGAAAAGGCGGAGCCACGGTTC
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000148715.8
CDS-3UTR CCA 90 bp GGAGGTAATTACAATAGATCTGAGTCCTGCCCTCTAGGAGCTGGTCAGCTAATGCCACGTGGAGGGCACTaGTCAGGATCCAGGCACCTG +
Preference number: 4 (lower is better)
Translates to: GGNYNRSESCPLGAGQLMPRGGH*SGSRHL
Trigger: CAGGTGCCTGGATCCTGACCAGTGCCCTCCACGTGG...CATTAGCTGACCAGCTCCTAGAGGGCAGGACTCAGATCTATTGTAATTACCTCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp CTTGCCCTGCTGGAGAGGATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATCTTCCTACTGAGGTCTaGCAGCCACTTCTGGCCTGC +
Preference number: 4 (lower is better)
Translates to: LALLERILLRLPNRCQRHLPTEV*QPLLAC
Trigger: GCAGGCCAGAAGTGGCTGCCAGACCTCAGTAGGAAG...ATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTATCCTCTCCAGCAGGGCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp GTCCTGCCCTCTAGGAGCTGGTCAGCTAATGAGTGGGTCAGGGGTCAGAAAGAACTCCCCACCAGATCTTaGTCAGGAATGCTTGCACAC +
Preference number: 4 (lower is better)
Translates to: VLPSRSWSANEWVRGQKELPTRS*SGMLAH
Trigger: GTGTGCAAGCATTCCTGACCAAGATCTGGTGGGGAG...TTCTTTCTGACCCCTGACCCACTCATTAGCTGACCAGCTCCTAGAGGGCAGGAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp TGGCCAGATCCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAATGTGTAGATGAGGGCTaGGCAGGTGAAGGCACCCAG +
Preference number: 4 (lower is better)
Translates to: WPDPAVQSKPVKALVGHECVDEG*AGEGTQ
Trigger: CTGGGTGCCTTCACCTGCCCAGCCCTCATCTACACA...TTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGGATCTGGCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp CTTGCCCTGCTGGAGAGGATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGCAGGTGCCACTCGGTaGGCAGGAGTTCAAAAAGCA +
Preference number: 4 (lower is better)
Translates to: LALLERILLRLPNRCQRHAGATR*AGVQKA
Trigger: TGCTTTTTGAACTCCTGCTCACCGAGTGGCACCTGC...ATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTATCCTCTCCAGCAGGGCAAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp TTGAACCGTTTCCCAGGTAATGATCTTCTGGTCCAAGGGGTCAGGCAAGTCTCTACTCCCAAGGGCGCCTaGCTCCACAAGGATGAAGTG +
Preference number: 4 (lower is better)
Translates to: LNRFPGNDLLVQGVRQVSTPKGA*LHKDEV
Trigger: CACTTCATCCTTGTGGAGTCAGGCGCCCTTGGGAGT...AGAGACTTGCCTGACCCCTTGGACCAGAAGATCATTACCTGGGAAACGGTTCAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp CTTGCCCTGCTGGAGAGGATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATCATGCAGGAAGTCTTTaGGTACGCGGGAGACCTCGT +
Preference number: 4 (lower is better)
Translates to: LALLERILLRLPNRCQRHHAGSL*VRGRPR
Trigger: ACGAGGTCTCCCGCGTACTCAAAGACTTCCTGCATG...ATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTATCCTCTCCAGCAGGGCAAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp TGGCCAGATCCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAAGGATCCAGGCACCTGTaGTCTGAGCTGCTTTCACCA +
Preference number: 4 (lower is better)
Translates to: WPDPAVQSKPVKALVGHEGSRHL*SELLSP
Trigger: TGGTGAAAGCAGCTCAGAGCACAGGTGCCTGGATCC...TTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGGATCTGGCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp GATGAAGGGCGGGGCCAGAGCTGGTCTTCCATGGTATTCAACGATGAGGTGGTAAATTTCTCTCTGAACTaGTTCTCAGCCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: DEGRGQSWSSMVFNDEVVNFSLN*FSATWG
Trigger: GCCCCAGGTGGCTGAGAAGCAGTTCAGAGAGAAATT...TACCACCTCATCGTTGAATACCATGGAAGACCAGCTCTGGCCCCGCCCTTCATC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp ATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGAGTTTCATTCTCTTAGGCAGCCACTTCTGGCCTaGGGGCCGCTTAGGTGGCCC +
Preference number: 4 (lower is better)
Translates to: ILLRLPNRCQRHEFHSLRQPLLA*GPLRWP
Trigger: GGGCCACCTAAGCGGCCCGCAGGCCAGAAGTGGCTG...CCTAAGAGAATGAAACTCATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp CCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAAAAATCTTGCGCAGGCACGTGGTCCTaGTCCAGCTGTGGTTCCTTC +
Preference number: 4 (lower is better)
Translates to: PAVQSKPVKALVGHEKSCAGTWS*SSCGSF
Trigger: GAAGGAACCACAGCTGGAGCAGGACCACGTGCCTGC...GCAAGATTTTTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp GGAGGTAATTACAATAGATCTGAGTCCTGCCCTCTAGGAGCTGGTCAGCTAATGACGCGGGAGACCTCGTaGAGTGAGAAGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: GGNYNRSESCPLGAGQLMTRETS*SEKAGR
Trigger: TCTGCCTGCCTTCTCACTCCACGAGGTCTCCCGCGT...CATTAGCTGACCAGCTCCTAGAGGGCAGGACTCAGATCTATTGTAATTACCTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp ATTGTGGGAACCGTGGCTCCGCCTTTTCCTTTTTCGTCATTTCTGGGTGGGTTTGGGCGGGGCCAGAGCTaGTCTTCCATGGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: IVGTVAPPFPFSSFLGGFGRGQS*SSMVFN
Trigger: GTTGAATACCATGGAAGACCAGCTCTGGCCCCGCCC...AAACCCACCCAGAAATGACGAAAAAGGAAAAGGCGGAGCCACGGTTCCCACAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000148715.8
CDS-3UTR CCA 90 bp GGCTCCGCCTTTTCCTTTTTCGTCATTTCTGGGTGGGTTTCCGTGTGCGCTCCGTCCTCCGTTTCTCCATaGTACTCAGGAAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: GSAFSFFVISGWVSVCAPSSVSP*YSGSSP
Trigger: AGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGA...CGGAGCGCACACGGAAACCCACCCAGAAATGACGAAAAAGGAAAAGGCGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148715.8
CDS-3UTR CCA 90 bp GGCTCCGCCTTTTCCTTTTTCGTCATTTCTGGGTGGGTTTCCGTGTGCGCTCCGGGAGCATACAGTAGTTaGCCTGTGATTCCAGACACT +
Preference number: 4 (lower is better)
Translates to: GSAFSFFVISGWVSVCAPGAYSS*PVIPDT
Trigger: AGTGTCTGGAATCACAGGCCAACTACTGTATGCTCC...CGGAGCGCACACGGAAACCCACCCAGAAATGACGAAAAAGGAAAAGGCGGAGCC
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148715.8
CDS-3UTR TCA 90 bp CTTGCCCTGCTGGAGAGGATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATTGTTGGGGTCACCATTaGCCAACAGGCAAAGGACAG +
Preference number: 4 (lower is better)
Translates to: LALLERILLRLPNRCQRHCWGHH*PTGKGQ
Trigger: CTGTCCTTTGCCTGTTGGTCAATGGTGACCCCAACA...ATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTATCCTCTCCAGCAGGGCAAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp GGAGGTAATTACAATAGATCTGAGTCCTGCCCTCTAGGAGCTGGTCAGCTAATGGGAGACCTCGTGGAGTaGGAAGGCAGGCAGACCAAT +
Preference number: 4 (lower is better)
Translates to: GGNYNRSESCPLGAGQLMGDLVE*EGRQTN
Trigger: ATTGGTCTGCCTGCCTTCTCACTCCACGAGGTCTCC...CATTAGCTGACCAGCTCCTAGAGGGCAGGACTCAGATCTATTGTAATTACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp GGAGGTAATTACAATAGATCTGAGTCCTGCCCTCTAGGAGCTGGTCAGCTAATGACTTCCTCCACCGTGTaGGCAGGAAGGCAGCTTGTG +
Preference number: 4 (lower is better)
Translates to: GGNYNRSESCPLGAGQLMTSSTV*AGRQLV
Trigger: CACAAGCTGCCTTCCTGCTCACACGGTGGAGGAAGT...CATTAGCTGACCAGCTCCTAGAGGGCAGGACTCAGATCTATTGTAATTACCTCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp GGCTCCGCCTTTTCCTTTTTCGTCATTTCTGGGTGGGTTTCCGTGTGCGCTCCGAGGAAGTTCTCCTTTTaGACCGTTTCCCAGGTAATG +
Preference number: 4 (lower is better)
Translates to: GSAFSFFVISGWVSVCAPRKFSF*TVSQVM
Trigger: CATTACCTGGGAAACGGTTCAAAAGGAGAACTTCCT...CGGAGCGCACACGGAAACCCACCCAGAAATGACGAAAAAGGAAAAGGCGGAGCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000148715.8
CDS-3UTR GCA 90 bp CTTGCCCTGCTGGAGAGGATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGAGAGCTTGAGTAGGTaGCTCCTGGAGCCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: LALLERILLRLPNRCQRHESLSR*LLEPVY
Trigger: ATACACTGGCTCCAGGAGGCACCTACTCAAGCTCTC...ATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTATCCTCTCCAGCAGGGCAAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp ACCCTTGAGCAATATCTTGGGGTTTCTGCCAGAATGATCAGACAGATAATGCTGTGCCAGGATCAGCCATaGGGCAGCCTGCTCCACTGC +
Preference number: 4 (lower is better)
Translates to: TLEQYLGVSARMIRQIMLCQDQP*GSLLHC
Trigger: GCAGTGGAGCAGGCTGCCCCATGGCTGATCCTGGCA...CAGCATTATCTGTCTGATCATTCTGGCAGAAACCCCAAGATATTGCTCAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp TTGAAACTTCCAGAACATGTCTGCATTGCCTTGCACCACCTGGAATGTGTAGCTACGCGGGAGACCTCGTaGAGTGAGAAGGCAGGCAGA +
Preference number: 4 (lower is better)
Translates to: LKLPEHVCIALHHLECVATRETS*SEKAGR
Trigger: TCTGCCTGCCTTCTCACTCCACGAGGTCTCCCGCGT...AGCTACACATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp ACCCTTGAGCAATATCTTGGGGTTTCTGCCAGAATGATCAGACAGATAATGCTGTCTGGCAGCCACTTCTaGCCTGCGGGCCGCTTAGGT +
Preference number: 4 (lower is better)
Translates to: TLEQYLGVSARMIRQIMLSGSHF*PAGRLG
Trigger: ACCTAAGCGGCCCGCAGGCCAGAAGTGGCTGCCAGA...CAGCATTATCTGTCTGATCATTCTGGCAGAAACCCCAAGATATTGCTCAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp TCGCTTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGTGGCCCAGAAGTATGTaGCCATCTCATAACGATTCT +
Preference number: 4 (lower is better)
Translates to: SLMLGFLPEDLLEHQAQVWPRSM*PSHNDS
Trigger: AGAATCGTTATGAGATGGCCACATACTTCTGGGCCA...CACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAAGCGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp ACCCTTGAGCAATATCTTGGGGTTTCTGCCAGAATGATCAGACAGATAATGCTGCACCCTCCCGGCCCATaGCCCAGAAGTATGTGGCCA +
Preference number: 4 (lower is better)
Translates to: TLEQYLGVSARMIRQIMLHPPGP*PRSMWP
Trigger: TGGCCACATACTTCTGGGCCATGGGCCGGGAGGGTG...CAGCATTATCTGTCTGATCATTCTGGCAGAAACCCCAAGATATTGCTCAAGGGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp TTGAAACTTCCAGAACATGTCTGCATTGCCTTGCACCACCTGGAATGTGTAGCTGGATGGGTGTGCCTGTaGCCATGTCTCCCCACCAGA +
Preference number: 4 (lower is better)
Translates to: LKLPEHVCIALHHLECVAGWVCL*PCLPTR
Trigger: TCTGGTGGGGAGACATGGCCACAGGCACACCCATCC...AGCTACACATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp ACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATCTTGGGCGGCCCCTGGGGTGGTaGCCTGAAGTCCACCAGCAG +
Preference number: 4 (lower is better)
Translates to: TGFIESKVALGTLEQYLGRPLGW*PEVHQQ
Trigger: CTGCTGGTGGACTTCAGGCCACCACCCCAGGGGCCG...CCCAAGATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp ATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGAGTTTCATTCTCTTAGGAGACGGCCCCTGGGGTaGTGGCCTGAAGTCCACCAG +
Preference number: 4 (lower is better)
Translates to: ILLRLPNRCQRHEFHSLRRRPLG*WPEVHQ
Trigger: CTGGTGGACTTCAGGCCACCACCCCAGGGGCCGTCT...CCTAAGAGAATGAAACTCATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp CCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAAAAATCTTGCGCAGCAGGGCCTGAGTaGTCACACCATAGGCCACAA +
Preference number: 4 (lower is better)
Translates to: PAVQSKPVKALVGHEKSCAAGPE*SHHRPQ
Trigger: TTGTGGCCTATGGTGTGACCACTCAGGCCCTGCTGC...GCAAGATTTTTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGG
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp GTCCTGCCCTCTAGGAGCTGGTCAGCTAATGAGTGGGTCAGGGGTCAGAAAGAAGGAGCATACAGTAGTTaGCCTGTGATTCCAGACACT +
Preference number: 4 (lower is better)
Translates to: VLPSRSWSANEWVRGQKEGAYSS*PVIPDT
Trigger: AGTGTCTGGAATCACAGGCCAACTACTGTATGCTCC...TTCTTTCTGACCCCTGACCCACTCATTAGCTGACCAGCTCCTAGAGGGCAGGAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp TGGCCAGATCCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAACTGACTCCACAAGGATaGAGTGGGAGAGATTGCTGT +
Preference number: 4 (lower is better)
Translates to: WPDPAVQSKPVKALVGHELTPQG*SGRDCC
Trigger: ACAGCAATCTCTCCCACTTCATCCTTGTGGAGTCAG...TTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGGATCTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp AACCACAGTTCTGAGAGCTTGAGTAGGTGCCTCCTGGAGCCAGTGTATCCGTCACTTCCACATACAGAGTaGATTTCTTCACCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: NHSSESLSRCLLEPVYPSLPHTE*ISSPGA
Trigger: CGCACCTGGTGAAGAAATTCACTCTGTATGTGGAAG...TGACGGATACACTGGCTCCAGGAGGCACCTACTCAAGCTCTCAGAACTGTGGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp TCCGCCTTTTCCTTTTTCGTCATTTCTGGGTGGGTTTCCGTGTGCGCTCCGGGTGTGATTCCAGACACTTaGTCCTCTTTTCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: SAFSFFVISGWVSVCAPGVIPDT*SSFLAL
Trigger: GAGAGCAAGAAAAGAGGATCAAGTGTCTGGAATCAC...ACCCGGAGCGCACACGGAAACCCACCCAGAAATGACGAAAAAGGAAAAGGCGGA
51% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000148715.8
CDS-3UTR TCA 90 bp TTGAACCGTTTCCCAGGTAATGATCTTCTGGTCCAAGGGGTCAGGCAAGTCTCTTCTCTGTCAGCACCCTaGACATGGCGATCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LNRFPGNDLLVQGVRQVSSLSAP*TWRSEG
Trigger: ACCTTCTGATCGCCATGTTCAGGGTGCTGACAGAGA...AGAGACTTGCCTGACCCCTTGGACCAGAAGATCATTACCTGGGAAACGGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp GGAGGTAATTACAATAGATCTGAGTCCTGCCCTCTAGGAGCTGGTCAGCTAATGGGGGTCCCTGAATGTTaGCCTCATCTGCTGGGTAGT +
Preference number: 4 (lower is better)
Translates to: GGNYNRSESCPLGAGQLMGVPEC*PHLLGS
Trigger: ACTACCCAGCAGATGAGGGCAACATTCAGGGACCCC...CATTAGCTGACCAGCTCCTAGAGGGCAGGACTCAGATCTATTGTAATTACCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp GGAGGTAATTACAATAGATCTGAGTCCTGCCCTCTAGGAGCTGGTCAGCTAATGGGACAGGTATCTGGATaGAGCTGGTGCCCCCATAAC +
Preference number: 4 (lower is better)
Translates to: GGNYNRSESCPLGAGQLMGQVSG*SWCPHN
Trigger: GTTATGGGGGCACCAGCTGCATCCAGATACCTGTCC...CATTAGCTGACCAGCTCCTAGAGGGCAGGACTCAGATCTATTGTAATTACCTCC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp TGGCCAGATCCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAAAATTTCTCTCTGAACTaGTTCTCAGCCACCTGGGGC +
Preference number: 4 (lower is better)
Translates to: WPDPAVQSKPVKALVGHENFSLN*FSATWG
Trigger: GCCCCAGGTGGCTGAGAAGCAGTTCAGAGAGAAATT...TTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGGATCTGGCCA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp TGGCCAGATCCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAATCCTCCGAACCCTCCTaGTCGAAGTCATATACTGTG +
Preference number: 4 (lower is better)
Translates to: WPDPAVQSKPVKALVGHESSEPS*SKSYTV
Trigger: CACAGTATATGACTTCGAGCAGGAGGGTTCGGAGGA...TTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGGATCTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp ATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGAGTTTCATTCTCTTAGGGCCGTAGGATGGGTGTaGCTGTGGCCATGTCTCCCC +
Preference number: 4 (lower is better)
Translates to: ILLRLPNRCQRHEFHSLRAVGWV*LWPCLP
Trigger: GGGGAGACATGGCCACAGGCACACCCATCCTACGGC...CCTAAGAGAATGAAACTCATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp CCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAAAAATCTTGCTCTAGGTCCATCCTCTaGGGGGCATCCTCACTGAAG +
Preference number: 4 (lower is better)
Translates to: PAVQSKPVKALVGHEKSCSRSIL*GASSLK
Trigger: CTTCAGTGAGGATGCCCCGCAGAGGATGGACCTAGA...GCAAGATTTTTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp TCGCTTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGAACAGGAAGAGGAATaGGAAGTACATGACCACATT +
Preference number: 4 (lower is better)
Translates to: SLMLGFLPEDLLEHQAQVEQEEE*EVHDHI
Trigger: AATGTGGTCATGTACTTCGCATTCCTCTTCCTGTTC...CACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAAGCGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp CTTGCCCTGCTGGAGAGGATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATTATACTGTGAGCAGGTaGGGGTGTGCAGCAATGTTC +
Preference number: 4 (lower is better)
Translates to: LALLERILLRLPNRCQRHYTVSR*GCAAMF
Trigger: GAACATTGCTGCACACCCCCACCTGCTCACAGTATA...ATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTATCCTCTCCAGCAGGGCAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp ATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGAGTTTCATTCTCTTAGGTGCGGGCCGCTTAGGTaGCCCTCTCTCCTCCATCCT +
Preference number: 4 (lower is better)
Translates to: ILLRLPNRCQRHEFHSLRCGPLR*PSLLHP
Trigger: AGGATGGAGGAGAGAGGGCCACCTAAGCGGCCCGCA...CCTAAGAGAATGAAACTCATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp TTGAACCGTTTCCCAGGTAATGATCTTCTGGTCCAAGGGGTCAGGCAAGTCTCTCTCCCCACCAGATCTTaGTCAGGAATGCTTGCACAC +
Preference number: 4 (lower is better)
Translates to: LNRFPGNDLLVQGVRQVSLPTRS*SGMLAH
Trigger: GTGTGCAAGCATTCCTGACCAAGATCTGGTGGGGAG...AGAGACTTGCCTGACCCCTTGGACCAGAAGATCATTACCTGGGAAACGGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp GGAGGTAATTACAATAGATCTGAGTCCTGCCCTCTAGGAGCTGGTCAGCTAATGGTCTCTAGCAGAGGCTaGCTGACTCCTGCAACCACA +
Preference number: 4 (lower is better)
Translates to: GGNYNRSESCPLGAGQLMVSSRG*LTPATT
Trigger: TGTGGTTGCAGGAGTCAGCCAGCCTCTGCTAGAGAC...CATTAGCTGACCAGCTCCTAGAGGGCAGGACTCAGATCTATTGTAATTACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp TTGAAACTTCCAGAACATGTCTGCATTGCCTTGCACCACCTGGAATGTGTAGCTCGAAGTCATATACTGTaGGCAGGTGGGGGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: LKLPEHVCIALHHLECVARSHIL*AGGGVQ
Trigger: CTGCACACCCCCACCTGCTCACAGTATATGACTTCG...AGCTACACATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp AGAGGGACTGGGCTCTTAGCTGTGTTCAGCCTTGTGCCCCTGATGGTAGTGAATGTGATTCCAGACACTTaGTCCTCTTTTCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: RGTGLLAVFSLVPLMVVNVIPDT*SSFLAL
Trigger: GAGAGCAAGAAAAGAGGATCAAGTGTCTGGAATCAC...ATTCACTACCATCAGGGGCACAAGGCTGAACACAGCTAAGAGCCCAGTCCCTCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
CDS-3UTR TCA 90 bp ACCCTTGAGCAATATCTTGGGGTTTCTGCCAGAATGATCAGACAGATAATGCTGCTAGCAGAGGCTGGCTaGCTCCTGCAACCACAGTTC +
Preference number: 4 (lower is better)
Translates to: TLEQYLGVSARMIRQIMLLAEAG*LLQPQF
Trigger: GAACTGTGGTTGCAGGAGTCAGCCAGCCTCTGCTAG...CAGCATTATCTGTCTGATCATTCTGGCAGAAACCCCAAGATATTGCTCAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp ATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGAGTTTCATTCTCTTAGGTTCTCCAGGCTCAGCTaGAGCTCTGTCAGCCCGTCG +
Preference number: 4 (lower is better)
Translates to: ILLRLPNRCQRHEFHSLRFSRLS*SSVSPS
Trigger: CGACGGGCTGACAGAGCTGCAGCTGAGCCTGGAGAA...CCTAAGAGAATGAAACTCATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp GGTAGCGTTGAAACTTCCAGAACATGTCTGCATTGCCTTGCACCACCTGGAATGTATACTGTGAGCAGGTaGGGGTGTGCAGCAATGTTC +
Preference number: 4 (lower is better)
Translates to: GSVETSRTCLHCLAPPGMYTVSR*GCAAMF
Trigger: GAACATTGCTGCACACCCCCACCTGCTCACAGTATA...CATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAACGCTACC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp GTAGCGTTGAAACTTCCAGAACATGTCTGCATTGCCTTGCACCACCTGGAATGTTGGGCTTCTTGGCTGTaGCTCTTGCAGGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: VALKLPEHVCIALHHLECWASWL*LLQAFT
Trigger: TGTGAAAGCCTGCAAGAGCCACAGCCAAGAAGCCCA...ACATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAACGCTAC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp ATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGAGTTTCATTCTCTTAGGTGGCATCAGCTTCAGTaGCCAGGTGCAGGCACGTGG +
Preference number: 4 (lower is better)
Translates to: ILLRLPNRCQRHEFHSLRWHQLQ*PGAGTW
Trigger: CCACGTGCCTGCACCTGGCCACTGAAGCTGATGCCA...CCTAAGAGAATGAAACTCATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp TTGAAACTTCCAGAACATGTCTGCATTGCCTTGCACCACCTGGAATGTGTAGCTGTTAGCTTCTCCAATTaGCCACCCCGGCTGCATAGG +
Preference number: 4 (lower is better)
Translates to: LKLPEHVCIALHHLECVAVSFSN*PPRLHR
Trigger: CCTATGCAGCCGGGGTGGCCAATTGGAGAAGCTAAC...AGCTACACATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CCA 90 bp ACCCTTGAGCAATATCTTGGGGTTTCTGCCAGAATGATCAGACAGATAATGCTGGGGCGGGGCCAGAGCTaGTCTTCCATGGTATTCAAC +
Preference number: 4 (lower is better)
Translates to: TLEQYLGVSARMIRQIMLGRGQS*SSMVFN
Trigger: GTTGAATACCATGGAAGACCAGCTCTGGCCCCGCCC...CAGCATTATCTGTCTGATCATTCTGGCAGAAACCCCAAGATATTGCTCAAGGGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp TTGAGGTGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGAGCACCAGGCTCAGGTaGCTGAGCAGGATGAAGGGC +
Preference number: 4 (lower is better)
Translates to: LRWSTGFIESKVALGTLESTRLR*LSRMKG
Trigger: GCCCTTCATCCTGCTCAGCCACCTGAGCCTGGTGCT...CTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCACCTCAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp CTTGCCCTGCTGGAGAGGATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATTCCTCCGTTTCTCCATaGTACTCAGGAAGTTCTCCT +
Preference number: 4 (lower is better)
Translates to: LALLERILLRLPNRCQRHSSVSP*YSGSSP
Trigger: AGGAGAACTTCCTGAGTACCATGGAGAAACGGAGGA...ATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTATCCTCTCCAGCAGGGCAAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
3UTR CAA 72 bp AGGACTGCCGTGAAGGTTTGCCATGGTCATTTACATTaGTCACTGATGAAACTACCCAGAGGGACTGGGCTC +
Preference number: 4 (lower is better)
Translates to: RTAVKVCHGHLH*SLMKLPRGTGL
Trigger: GAGCCCAGTCCCTCTGGGTAGTTTCATCAGTGACAAATGTAAATGACCATGGCAAACCTTCACGGCAGTCCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
CDS-3UTR TCA 90 bp CTTGCCCTGCTGGAGAGGATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATATTCCACGTCCCCATTaGAGATTTCACTCTTGGCAA +
Preference number: 4 (lower is better)
Translates to: LALLERILLRLPNRCQRHIPRPH*RFHSWQ
Trigger: TTGCCAAGAGTGAAATCTTCAATGGGGACGTGGAAT...ATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTATCCTCTCCAGCAGGGCAAG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp TTGAGGTGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGACCTGTGCTCTGAGCTaGTTTCACCAGCCCCTTGCG +
Preference number: 4 (lower is better)
Translates to: LRWSTGFIESKVALGTLETCALS*FHQPLA
Trigger: CGCAAGGGGCTGGTGAAAGCAGCTCAGAGCACAGGT...CTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCACCTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp GTAGCGTTGAAACTTCCAGAACATGTCTGCATTGCCTTGCACCACCTGGAATGTTCCTCCGAACCCTCCTaGTCGAAGTCATATACTGTG +
Preference number: 4 (lower is better)
Translates to: VALKLPEHVCIALHHLECSSEPS*SKSYTV
Trigger: CACAGTATATGACTTCGAGCAGGAGGGTTCGGAGGA...ACATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAACGCTAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR GCA 90 bp GGGCCTGTACAGACCACAGGTTATAGGAAGAGGATGAGTTGTGAAGCAGCATATCTGAAGTTGAGTAGGTaGCTCCTGGAGCCAGTGTAT +
Preference number: 4 (lower is better)
Translates to: GPVQTTGYRKRMSCEAAYLKLSR*LLEPVY
Trigger: ATACACTGGCTCCAGGAGGCACCTACTCAACTTCAG...ATATGCTGCTTCACAACTCATCCTCTTCCTATAACCTGTGGTCTGTACAGGCCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
CDS-3UTR CCA 90 bp TTGAGGTGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCCAGAAGCCGTAGGATaGGTGTGCCTGTGGCCATGT +
Preference number: 4 (lower is better)
Translates to: LRWSTGFIESKVALGTLEPEAVG*VCLWPC
Trigger: ACATGGCCACAGGCACACCCATCCTACGGCTTCTGG...CTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCACCTCAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp TGGCCAGATCCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAAGAACAGGAAGAGGAATaGGAAGTACATGACCACATT +
Preference number: 4 (lower is better)
Translates to: WPDPAVQSKPVKALVGHEEQEEE*EVHDHI
Trigger: AATGTGGTCATGTACTTCGCATTCCTCTTCCTGTTC...TTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGGATCTGGCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp GGAGGTAATTACAATAGATCTGAGTCCTGCCCTCTAGGAGCTGGTCAGCTAATGAGAACATGTCTGCATTaGCTTGCACCACCTGGAATG +
Preference number: 4 (lower is better)
Translates to: GGNYNRSESCPLGAGQLMRTCLH*LAPPGM
Trigger: CATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCT...CATTAGCTGACCAGCTCCTAGAGGGCAGGACTCAGATCTATTGTAATTACCTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp TTGAACCGTTTCCCAGGTAATGATCTTCTGGTCCAAGGGGTCAGGCAAGTCTCTGCCTCTTTCTCCAGGTaGGACATTTCCTTTATGATC +
Preference number: 4 (lower is better)
Translates to: LNRFPGNDLLVQGVRQVSASFSR*DISFMI
Trigger: GATCATAAAGGAAATGTCCCACCTGGAGAAAGAGGC...AGAGACTTGCCTGACCCCTTGGACCAGAAGATCATTACCTGGGAAACGGTTCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp ACCCTTGAGCAATATCTTGGGGTTTCTGCCAGAATGATCAGACAGATAATGCTGGGGACATTTCCTTTATaGTCTTGCAGGCAGCCAGAG +
Preference number: 4 (lower is better)
Translates to: TLEQYLGVSARMIRQIMLGTFPL*SCRQPE
Trigger: CTCTGGCTGCCTGCAAGATCATAAAGGAAATGTCCC...CAGCATTATCTGTCTGATCATTCTGGCAGAAACCCCAAGATATTGCTCAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp ATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGAGTTTCATTCTCTTAGGGCGTGTCCTCATCTGTaGAGAAGCCCTGTCGGATTT +
Preference number: 4 (lower is better)
Translates to: ILLRLPNRCQRHEFHSLRACPHL*RSPVGF
Trigger: AAATCCGACAGGGCTTCTTCACAGATGAGGACACGC...CCTAAGAGAATGAAACTCATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp TTGAGGTGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGTCCAGCAGCAGAGGGTaGAGAGAACAGTTCACACGA +
Preference number: 4 (lower is better)
Translates to: LRWSTGFIESKVALGTLESSSRG*REQFTR
Trigger: TCGTGTGAACTGTTCTCTTCACCCTCTGCTGCTGGA...CTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCACCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp CCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAAAAATCTTGCGTGATTCCAGACACTTaGTCCTCTTTTCTTGCTCTC +
Preference number: 4 (lower is better)
Translates to: PAVQSKPVKALVGHEKSCVIPDT*SSFLAL
Trigger: GAGAGCAAGAAAAGAGGATCAAGTGTCTGGAATCAC...GCAAGATTTTTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp TGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATAATGCCACCAGAACCTaGCAGGATCAGCCATGGGGC +
Preference number: 4 (lower is better)
Translates to: WSTGFIESKVALGTLEQYNATRT*QDQPWG
Trigger: GCCCCATGGCTGATCCTGGCAGGTTCTGGTGGCATT...ATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp ACCCTTGAGCAATATCTTGGGGTTTCTGCCAGAATGATCAGACAGATAATGCTGCTTCCAGAACATGTCTaGATTGCCTTGCACCACCTG +
Preference number: 4 (lower is better)
Translates to: TLEQYLGVSARMIRQIMLLPEHV*IALHHL
Trigger: CAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAG...CAGCATTATCTGTCTGATCATTCTGGCAGAAACCCCAAGATATTGCTCAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp TTGAGGTGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGTGGGCTTCTTGGCTGTaGCTCTTGCAGGCTTTCACA +
Preference number: 4 (lower is better)
Translates to: LRWSTGFIESKVALGTLEWASWL*LLQAFT
Trigger: TGTGAAAGCCTGCAAGAGCCACAGCCAAGAAGCCCA...CTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCACCTCAA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
3UTR CAA 72 bp TGGTCTTCCATGGTATTCAACGATGAGGTGGTAGCGTaGAAACTTCCAGAACATGTCTGCATTGCCTTGCAC +
Preference number: 4 (lower is better)
Translates to: WSSMVFNDEVVA*KLPEHVCIALH
Trigger: GTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAACGCTACCACCTCATCGTTGAATACCATGGAAGACCA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
3UTR CAA 72 bp CCTCCGTTTCTCCATGGTACTCAGGAAGTTCTCCTTTaGAACCGTTTCCCAGGTAATGATCTTCTGGTCCAA +
Preference number: 4 (lower is better)
Translates to: PPFLHGTQEVLL*NRFPGNDLLVQ
Trigger: TTGGACCAGAAGATCATTACCTGGGAAACGGTTCAAAAGGAGAACTTCCTGAGTACCATGGAGAAACGGAGG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR TCA 90 bp ATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGAGTTTCATTCTCTTAGGTGGGGAATTTCTCTCTaGACTGCTTCTCAGCCACCT +
Preference number: 4 (lower is better)
Translates to: ILLRLPNRCQRHEFHSLRWGISL*TASQPP
Trigger: AGGTGGCTGAGAAGCAGTTCAGAGAGAAATTCCCCA...CCTAAGAGAATGAAACTCATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp TGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATCGAAGTCATATACTGTaGGCAGGTGGGGGTGTGCAG +
Preference number: 4 (lower is better)
Translates to: WSTGFIESKVALGTLEQYRSHIL*AGGGVQ
Trigger: CTGCACACCCCCACCTGCTCACAGTATATGACTTCG...ATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp ACCCTTGAGCAATATCTTGGGGTTTCTGCCAGAATGATCAGACAGATAATGCTGCTTCCACATACAGAGTaGATTTCTTCACCAGGTGCG +
Preference number: 4 (lower is better)
Translates to: TLEQYLGVSARMIRQIMLLPHTE*ISSPGA
Trigger: CGCACCTGGTGAAGAAATTCACTCTGTATGTGGAAG...CAGCATTATCTGTCTGATCATTCTGGCAGAAACCCCAAGATATTGCTCAAGGGT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp TTGAGGTGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCCTGGAATGTGTAGCTaGACATGGCGATCAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LRWSTGFIESKVALGTLEPGMCS*TWRSEG
Trigger: ACCTTCTGATCGCCATGTTCAGCTACACATTCCAGG...CTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCACCTCAA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp ACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATCTTGGGCTTGGCTGTGGCTCTTaGAGGCTTTCACAAGTGCCT +
Preference number: 4 (lower is better)
Translates to: TGFIESKVALGTLEQYLGLGCGS*RLSQVP
Trigger: AGGCACTTGTGAAAGCCTGCAAGAGCCACAGCCAAG...CCCAAGATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp TGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATCAAAGGACAGGTATCTaGATGCAGCTGGTGCCCCCA +
Preference number: 4 (lower is better)
Translates to: WSTGFIESKVALGTLEQYQRTGI*MQLVPP
Trigger: TGGGGGCACCAGCTGCATCCAGATACCTGTCCTTTG...ATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp TGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATGCTTGCACACCGTCATaGGCAAAGAAGGCCTTGGCA +
Preference number: 4 (lower is better)
Translates to: WSTGFIESKVALGTLEQYACTPS*AKKALA
Trigger: TGCCAAGGCCTTCTTTGCCCATGACGGTGTGCAAGC...ATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
3UTR CAA 72 bp AGGTGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATaGGGTACCCTTGAGCAATATCTTGGGGTTTCTGCC +
Preference number: 4 (lower is better)
Translates to: RWSTGFIESKVA*GTLEQYLGVSA
Trigger: GGCAGAAACCCCAAGATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCACCT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp TGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATGCAGGCTTTCACAAGTaGCTTGAGGATGACAGTGTC +
Preference number: 4 (lower is better)
Translates to: WSTGFIESKVALGTLEQYAGFHK*LEDDSV
Trigger: GACACTGTCATCCTCAAGGCACTTGTGAAAGCCTGC...ATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR GCA 90 bp TGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATAAGCTGTCTGGCTCCTaGAGATCTTCTAGGTCCATC +
Preference number: 4 (lower is better)
Translates to: WSTGFIESKVALGTLEQYKLSGS*RSSRSI
Trigger: GATGGACCTAGAAGATCTGCAGGAGCCAGACAGCTT...ATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR TCA 90 bp ACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATCTTGGGAGGAAGTTCTCCTTTTaGACCGTTTCCCAGGTAATG +
Preference number: 4 (lower is better)
Translates to: TGFIESKVALGTLEQYLGRKFSF*TVSQVM
Trigger: CATTACCTGGGAAACGGTTCAAAAGGAGAACTTCCT...CCCAAGATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp ACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATCTTGGGGCCTCTTTCTCCAGGTaGGACATTTCCTTTATGATC +
Preference number: 4 (lower is better)
Translates to: TGFIESKVALGTLEQYLGASFSR*DISFMI
Trigger: GATCATAAAGGAAATGTCCCACCTGGAGAAAGAGGC...CCCAAGATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CCA 90 bp TGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATTGGCCCAGAAGTATGTaGCCATCTCATAACGATTCT +
Preference number: 4 (lower is better)
Translates to: WSTGFIESKVALGTLEQYWPRSM*PSHNDS
Trigger: AGAATCGTTATGAGATGGCCACATACTTCTGGGCCA...ATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS CCA 90 bp CCTACTGAGGTCTGGCAGCCACTTCTGGCCTGCGGGCCGCTTAGGTaGCCCTCTCTCCTCCATCCTGCGCCCGTCCTGGTAGAAGCCACG +
Preference number: 5 (lower is better)
Translates to: PTEVWQPLLACGPLR*PSLLHPAPVLVEAT
Trigger: CGTGGCTTCTACCAGGACGGGCGCAGGATGGAGGAGAGAGGGCCACCTAAGCGGCCCGCAGGCCAGAAGTGGCTGCCAGACCTCAGTAGG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS GCA 90 bp AGGGTCTTCACTCTTCCTACTGAGGTCTGGCAGCCACTTCTGGCCTaGGGGCCGCTTAGGTGGCCCTCTCTCCTCCATCCTGCGCCCGTC +
Preference number: 5 (lower is better)
Translates to: RVFTLPTEVWQPLLA*GPLRWPSLLHPAPV
Trigger: GACGGGCGCAGGATGGAGGAGAGAGGGCCACCTAAGCGGCCCGCAGGCCAGAAGTGGCTGCCAGACCTCAGTAGGAAGAGTGAAGACCCT
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 90 bp TGGAGTGAGAAGGCAGGCAGACCAATGGGCAGCTCCCGAGCCTGCTaGGCACCCAGGCCGGCCAGTGTCAGCCTACCCTCCTCATGCTTA +
Preference number: 5 (lower is better)
Translates to: WSEKAGRPMGSSRAC*APRPASVSLPSSCL
Trigger: TAAGCATGAGGAGGGTAGGCTGACACTGGCCGGCCTGGGTGCCCAGCAGGCTCGGGAGCTGCCCATTGGTCTGCCTGCCTTCTCACTCCA
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 90 bp GGCGTCATGCAGGAAGTCTTTGAGTACGCGGGAGACCTCGTGGAGTaGGAAGGCAGGCAGACCAATGGGCAGCTCCCGAGCCTGCTGGGC +
Preference number: 5 (lower is better)
Translates to: GVMQEVFEYAGDLVE*EGRQTNGQLPSLLG
Trigger: GCCCAGCAGGCTCGGGAGCTGCCCATTGGTCTGCCTGCCTTCTCACTCCACGAGGTCTCCCGCGTACTCAAAGACTTCCTGCATGACGCC
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS GCA 90 bp GCCTGCTGGGCACCCAGGCCGGCCAGTGTCAGCCTACCCTCCTCATaGTTACGCTGCAGCAGTTCAAAGAGGAGGCTCTTGGGGGACACA +
Preference number: 5 (lower is better)
Translates to: ACWAPRPASVSLPSS*LRCSSSKRRLLGDT
Trigger: TGTGTCCCCCAAGAGCCTCCTCTTTGAACTGCTGCAGCGTAAGCATGAGGAGGGTAGGCTGACACTGGCCGGCCTGGGTGCCCAGCAGGC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS GCA 90 bp AGGCCTTGGCATCAGCTTCAGTGGCCAGGTGCAGGCACGTGGTCCTaGTCCAGCTGTGGTTCCTTCGCACCAGCAGGGCAAAGGCACGGT +
Preference number: 5 (lower is better)
Translates to: RPWHQLQWPGAGTWS*SSCGSFAPAGQRHG
Trigger: ACCGTGCCTTTGCCCTGCTGGTGCGAAGGAACCACAGCTGGAGCAGGACCACGTGCCTGCACCTGGCCACTGAAGCTGATGCCAAGGCCT
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 90 bp CTCCAAGGGTCTTCACTCTTCCTACTGAGGTCTGGCAGCCACTTCTaGCCTGCGGGCCGCTTAGGTGGCCCTCTCTCCTCCATCCTGCGC +
Preference number: 5 (lower is better)
Translates to: LQGSSLFLLRSGSHF*PAGRLGGPLSSILR
Trigger: GCGCAGGATGGAGGAGAGAGGGCCACCTAAGCGGCCCGCAGGCCAGAAGTGGCTGCCAGACCTCAGTAGGAAGAGTGAAGACCCTTGGAG
63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 90 bp CCAGGAACACAGTCACAGGAGCGCCCCAGAACTTCCTCCACCGTGTaGGCAGGAAGGCAGCTTGTGGGCCTAGATCGCCTGGAGCCCTTG +
Preference number: 5 (lower is better)
Translates to: PGTQSQERPRTSSTV*AGRQLVGLDRLEPL
Trigger: CAAGGGCTCCAGGCGATCTAGGCCCACAAGCTGCCTTCCTGCTCACACGGTGGAGGAAGTTCTGGGGCGCTCCTGTGACTGTGTTCCTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 90 bp CAAAGGTCGTTCCTCACCCACCAGGGACACCACCAGGTTGGGGGCTaGCAGGTGCCACTCGGTGAGCAGGAGTTCAAAAAGCACGGAGGG +
Preference number: 5 (lower is better)
Translates to: QRSFLTHQGHHQVGG*QVPLGEQEFKKHGG
Trigger: CCCTCCGTGCTTTTTGAACTCCTGCTCACCGAGTGGCACCTGCCAGCCCCCAACCTGGTGGTGTCCCTGGTGGGTGAGGAACGACCTTTG
62% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 90 bp GAGGAACAGGTCCCTCCAAGGGTCTTCACTCTTCCTACTGAGGTCTaGCAGCCACTTCTGGCCTGCGGGCCGCTTAGGTGGCCCTCTCTC +
Preference number: 5 (lower is better)
Translates to: EEQVPPRVFTLPTEV*QPLLACGPLRWPSL
Trigger: GAGAGAGGGCCACCTAAGCGGCCCGCAGGCCAGAAGTGGCTGCCAGACCTCAGTAGGAAGAGTGAAGACCCTTGGAGGGACCTGTTCCTC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 90 bp GCCCGTCCTGGTAGAAGCCACGGCAGGCGTCATGCAGGAAGTCTTTaGGTACGCGGGAGACCTCGTGGAGTGAGAAGGCAGGCAGACCAA +
Preference number: 5 (lower is better)
Translates to: ARPGRSHGRRHAGSL*VRGRPRGVRRQADQ
Trigger: TTGGTCTGCCTGCCTTCTCACTCCACGAGGTCTCCCGCGTACTCAAAGACTTCCTGCATGACGCCTGCCGTGGCTTCTACCAGGACGGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 90 bp TGCGGGCCACCTCTGCCTCTTTCTCCAGGTGGGACATTTCCTTTATaGTCTTGCAGGCAGCCAGAGCAGCAGCCACACCCTCCCGGCCCA +
Preference number: 5 (lower is better)
Translates to: CGPPLPLSPGGTFPL*SCRQPEQQPHPPGP
Trigger: TGGGCCGGGAGGGTGTGGCTGCTGCTCTGGCTGCCTGCAAGATCATAAAGGAAATGTCCCACCTGGAGAAAGAGGCAGAGGTGGCCCGCA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 90 bp CCGATGGCCACTACACGGATCTTGGTGGATGTGCTAGCCAGAGAGTaGTCACGTACAGCTTGTCCAACATGGCGGGCCAGGCCCACGTGG +
Preference number: 5 (lower is better)
Translates to: PMATTRILVDVLARE*SRTACPTWRARPTW
Trigger: CCACGTGGGCCTGGCCCGCCATGTTGGACAAGCTGTACGTGATCACTCTCTGGCTAGCACATCCACCAAGATCCGTGTAGTGGCCATCGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 90 bp CCAGAGCAGCAGCCACACCCTCCCGGCCCATGGCCCAGAAGTATGTaGCCATCTCATAACGATTCTGCAGCACAGCCCAGAGGAACAGGT +
Preference number: 5 (lower is better)
Translates to: PEQQPHPPGPWPRSM*PSHNDSAAQPRGTG
Trigger: ACCTGTTCCTCTGGGCTGTGCTGCAGAATCGTTATGAGATGGCCACATACTTCTGGGCCATGGGCCGGGAGGGTGTGGCTGCTGCTCTGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp TTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGGCTTTCACCAGCCCCTaGCGCAGGACATCCCGAAGC +
Preference number: 5 (lower is better)
Translates to: LCWASFLKTCLSTRLRWLAFTSP*RRTSRS
Trigger: GCTTCGGGATGTCCTGCGCAAGGGGCTGGTGAAAGC...CAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS CCA 90 bp TTGGCCTCACGCATGGTGCGGGCCACCTCTGCCTCTTTCTCCAGGTaGGACATTTCCTTTATGATCTTGCAGGCAGCCAGAGCAGCAGCC +
Preference number: 5 (lower is better)
Translates to: LASRMVRATSASFSR*DISFMILQAARAAA
Trigger: GGCTGCTGCTCTGGCTGCCTGCAAGATCATAAAGGAAATGTCCCACCTGGAGAAAGAGGCAGAGGTGGCCCGCACCATGCGTGAGGCCAA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 90 bp CACCAGCAGGGCAAAGGCACGGTCCTCACTGTTGCCGTAGCACTCTaGGAAAAGATCCAGGGCCAGCTGCTCATACTTGGCCTCACGCAT +
Preference number: 5 (lower is better)
Translates to: HQQGKGTVLTVAVAL*EKIQGQLLILGLTH
Trigger: ATGCGTGAGGCCAAGTATGAGCAGCTGGCCCTGGATCTTTTCTCAGAGTGCTACGGCAACAGTGAGGACCGTGCCTTTGCCCTGCTGGTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 90 bp CCTTCTGGGAGTTGTAGTTTCTCGGGCGCTGAAGCCACGAAAATCTaGTCGCCCGAGACTCGGTTTCCCAGGAACCCGAGCGAGACTGGA +
Preference number: 5 (lower is better)
Translates to: PSGSCSFSGAEATKI*SPETRFPRNPSETG
Trigger: TCCAGTCTCGCTCGGGTTCCTGGGAAACCGAGTCTCGGGCGATCAGATTTTCGTGGCTTCAGCGCCCGAGAAACTACAACTCCCAGAAGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000148715.8
CDS GCA 90 bp GGCCAGCTGCTCATACTTGGCCTCACGCATGGTGCGGGCCACCTCTaGCTCTTTCTCCAGGTGGGACATTTCCTTTATGATCTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: GQLLILGLTHGAGHL*LFLQVGHFLYDLAG
Trigger: GCCTGCAAGATCATAAAGGAAATGTCCCACCTGGAGAAAGAGGCAGAGGTGGCCCGCACCATGCGTGAGGCCAAGTATGAGCAGCTGGCC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 90 bp CTCGGTGAGCAGGAGTTCAAAAAGCACGGAGGGGGCCACACTGCTTaGCACCTTCACAAACTTGCCTCGCTTCTTCCCAGACCCTCCGAA +
Preference number: 5 (lower is better)
Translates to: LGEQEFKKHGGGHTA*HLHKLASLLPRPSE
Trigger: TTCGGAGGGTCTGGGAAGAAGCGAGGCAAGTTTGTGAAGGTGCCAAGCAGTGTGGCCCCCTCCGTGCTTTTTGAACTCCTGCTCACCGAG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 90 bp AATTTCTCTCTGAACTGCTTCTCAGCCACCTGGGGCACCAGGAGATaGGGCTGGCTCACCAGGGCAGCGAGTACATCAGCAATGCCACCA +
Preference number: 5 (lower is better)
Translates to: NFSLNCFSATWGTRR*GWLTRAASTSAMPP
Trigger: TGGTGGCATTGCTGATGTACTCGCTGCCCTGGTGAGCCAGCCTCATCTCCTGGTGCCCCAGGTGGCTGAGAAGCAGTTCAGAGAGAAATT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS GCA 90 bp TGTGGTTCCTTCGCACCAGCAGGGCAAAGGCACGGTCCTCACTGTTaGCGTAGCACTCTGAGAAAAGATCCAGGGCCAGCTGCTCATACT +
Preference number: 5 (lower is better)
Translates to: CGSFAPAGQRHGPHC*RSTLRKDPGPAAHT
Trigger: AGTATGAGCAGCTGGCCCTGGATCTTTTCTCAGAGTGCTACGGCAACAGTGAGGACCGTGCCTTTGCCCTGCTGGTGCGAAGGAACCACA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp TTGGCAATCAAGTCCACTCTGTGTGCCGTTTTCCTCAGCACCTCCCCCTCGCTGGGCACCTTCACAAACTaGCCTCGCTTCTTCCCAGAC +
Preference number: 5 (lower is better)
Translates to: LAIKSTLCAVFLSTSPSLGTFTN*PRFFPD
Trigger: GTCTGGGAAGAAGCGAGGCAAGTTTGTGAAGGTGCC...CAGCGAGGGGGAGGTGCTGAGGAAAACGGCACACAGAGTGGACTTGATTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp TGGCCAGATCCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAAGCTTTCACCAGCCCCTaGCGCAGGACATCCCGAAGC +
Preference number: 5 (lower is better)
Translates to: WPDPAVQSKPVKALVGHEAFTSP*RRTSRS
Trigger: GCTTCGGGATGTCCTGCGCAAGGGGCTGGTGAAAGC...TTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGGATCTGGCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp TTGGCAATCAAGTCCACTCTGTGTGCCGTTTTCCTCAGCACCTCCCCCTCGCTGGCCACTACACGGATCTaGGTGGATGTGCTAGCCAGA +
Preference number: 5 (lower is better)
Translates to: LAIKSTLCAVFLSTSPSLATTRI*VDVLAR
Trigger: TCTGGCTAGCACATCCACCAAGATCCGTGTAGTGGC...CAGCGAGGGGGAGGTGCTGAGGAAAACGGCACACAGAGTGGACTTGATTGCCAA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp TTATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGTCTTGGCTGTGGCTCTaGCAGGCTTTCACAAGTGCC +
Preference number: 5 (lower is better)
Translates to: LCWASFLKTCLSTRLRWLSWLWL*QAFTSA
Trigger: GGCACTTGTGAAAGCCTGCAAGAGCCACAGCCAAGA...CAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCATAA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp GCTGAGCAGGATGAAGGGCGGGGCCAGAGCTGGTCTTCCATGGTATTCAACGATTCATGCAGGAAGTCTTaGAGTACGCGGGAGACCTCG +
Preference number: 5 (lower is better)
Translates to: AEQDEGRGQSWSSMVFNDSCRKS*STRETS
Trigger: CGAGGTCTCCCGCGTACTCAAAGACTTCCTGCATGA...ATCGTTGAATACCATGGAAGACCAGCTCTGGCCCCGCCCTTCATCCTGCTCAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp ATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGAGTCTCCCCACCAGATCTaGGTCAGGAATGCTTGCACA +
Preference number: 5 (lower is better)
Translates to: MLGFLPEDLLEHQAQVAESPHQI*VRNACT
Trigger: TGTGCAAGCATTCCTGACCAAGATCTGGTGGGGAGA...CTCAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS TCA 90 bp GCACCTTCACAAACTTGCCTCGCTTCTTCCCAGACCCTCCGAAGTTaGTCTCTCCCCTGCATAGGATGGGCTCCCAGCCATCCTCAGTAT +
Preference number: 5 (lower is better)
Translates to: APSQTCLASSQTLRS*SLPCIGWAPSHPQY
Trigger: ATACTGAGGATGGCTGGGAGCCCATCCTATGCAGGGGAGAGATCAACTTCGGAGGGTCTGGGAAGAAGCGAGGCAAGTTTGTGAAGGTGC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 90 bp GTACAATGGCTTCCCAAGAGAAACACTCGCTGGGGAATTTCTCTCTaGACTGCTTCTCAGCCACCTGGGGCACCAGGAGATGAGGCTGGC +
Preference number: 5 (lower is better)
Translates to: VQWLPKRNTRWGISL*TASQPPGAPGDEAG
Trigger: GCCAGCCTCATCTCCTGGTGCCCCAGGTGGCTGAGAAGCAGTTCAGAGAGAAATTCCCCAGCGAGTGTTTCTCTTGGGAAGCCATTGTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS GCA 90 bp ACAAGTGCCTTGAGGATGACAGTGTCCAGGTCCTCCGAACCCTCCTaGTCGAAGTCATATACTGTGAGCAGGTGGGGGTGTGCAGCAATG +
Preference number: 5 (lower is better)
Translates to: TSALRMTVSRSSEPS*SKSYTVSRWGCAAM
Trigger: CATTGCTGCACACCCCCACCTGCTCACAGTATATGACTTCGAGCAGGAGGGTTCGGAGGACCTGGACACTGTCATCCTCAAGGCACTTGT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp AACCACAGTTCTGAGAGCTTGAGTAGGTGCCTCCTGGAGCCAGTGTATCCGTCAATGAAGTGGGAGAGATaGCTGTCCAGGGGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: NHSSESLSRCLLEPVYPSMKWER*LSRGQR
Trigger: CCTCTGCCCCCTGGACAGCAATCTCTCCCACTTCAT...TGACGGATACACTGGCTCCAGGAGGCACCTACTCAAGCTCTCAGAACTGTGGTT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp TCAAGTCCACTCTGTGTGCCGTTTTCCTCAGCACCTCCCCCTCGCTGTCCCTCCCATTCCACGTCCCCATaGAAGATTTCACTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: SSPLCVPFSSAPPPRCPSHSTSP*KISLLA
Trigger: TGCCAAGAGTGAAATCTTCAATGGGGACGTGGAATG...GGAGGGACAGCGAGGGGGAGGTGCTGAGGAAAACGGCACACAGAGTGGACTTGA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp ATGCTGGGCTTCCTTCCTGAAGACCTGCTTGAGCACCAGGCTCAGGTGGCTGAGGCCACCATGTCACACTaGTTCCAGTTGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: MLGFLPEDLLEHQAQVAEATMSH*FQLSST
Trigger: TGTGGAAGACAACTGGAACAAGTGTGACATGGTGGC...CTCAGCCACCTGAGCCTGGTGCTCAAGCAGGTCTTCAGGAAGGAAGCCCAGCAT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp CCTTTTTCGTCATTTCTGGGTGGGTTTCCGTGTGCGCTCCGGGTTGGCACGCTTTTAGGCGGGAACCCATaGCCTTCTGGGAGTTGTAGT +
Preference number: 5 (lower is better)
Translates to: PFSSFLGGFPCALRVGTLLGGNP*PSGSCS
Trigger: ACTACAACTCCCAGAAGGCAATGGGTTCCCGCCTAA...AAGCGTGCCAACCCGGAGCGCACACGGAAACCCACCCAGAAATGACGAAAAAGG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148715.8
CDS CCA 90 bp AGGTCCTCCGAACCCTCCTGCTCGAAGTCATATACTGTGAGCAGGTaGGGGTGTGCAGCAATGTTCTGTAACAGCTCTGTCCAGTGTACA +
Preference number: 5 (lower is better)
Translates to: RSSEPSCSKSYTVSR*GCAAMFCNSSVQCT
Trigger: TGTACACTGGACAGAGCTGTTACAGAACATTGCTGCACACCCCCACCTGCTCACAGTATATGACTTCGAGCAGGAGGGTTCGGAGGACCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp GTAGCGTTGAAACTTCCAGAACATGTCTGCATTGCCTTGCACCACCTGGAATGTCCAGACCCTCCGAAGTaGATCTCTCCCCTGCATAGG +
Preference number: 5 (lower is better)
Translates to: VALKLPEHVCIALHHLECPDPPK*ISPLHR
Trigger: CCTATGCAGGGGAGAGATCAACTTCGGAGGGTCTGG...ACATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAACGCTAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp TGGCCAGATCCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAATCTCCCCACCAGATCTaGGTCAGGAATGCTTGCACA +
Preference number: 5 (lower is better)
Translates to: WPDPAVQSKPVKALVGHESPHQI*VRNACT
Trigger: TGTGCAAGCATTCCTGACCAAGATCTGGTGGGGAGA...TTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGGATCTGGCCA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp GGAGGTAATTACAATAGATCTGAGTCCTGCCCTCTAGGAGCTGGTCAGCTAATGGCCACTACACGGATCTaGGTGGATGTGCTAGCCAGA +
Preference number: 5 (lower is better)
Translates to: GGNYNRSESCPLGAGQLMATTRI*VDVLAR
Trigger: TCTGGCTAGCACATCCACCAAGATCCGTGTAGTGGC...CATTAGCTGACCAGCTCCTAGAGGGCAGGACTCAGATCTATTGTAATTACCTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp TTGAACCGTTTCCCAGGTAATGATCTTCTGGTCCAAGGGGTCAGGCAAGTCTCTGTGTTGGGGTCACCATaGACCAACAGGCAAAGGACA +
Preference number: 5 (lower is better)
Translates to: LNRFPGNDLLVQGVRQVSVLGSP*TNRQRT
Trigger: TGTCCTTTGCCTGTTGGTCAATGGTGACCCCAACAC...AGAGACTTGCCTGACCCCTTGGACCAGAAGATCATTACCTGGGAAACGGTTCAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp TTGAAACTTCCAGAACATGTCTGCATTGCCTTGCACCACCTGGAATGTGTAGCTGTAGTCTTGGGCTTCTaGGCTGTGGCTCTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: LKLPEHVCIALHHLECVAVVLGF*AVALAG
Trigger: GCCTGCAAGAGCCACAGCCAAGAAGCCCAAGACTAC...AGCTACACATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp TGGCCAGATCCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAAGCCACCATGTCACACTaGTTCCAGTTGTCTTCCACA +
Preference number: 5 (lower is better)
Translates to: WPDPAVQSKPVKALVGHEATMSH*FQLSST
Trigger: TGTGGAAGACAACTGGAACAAGTGTGACATGGTGGC...TTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGGATCTGGCCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp ACCCTTGAGCAATATCTTGGGGTTTCTGCCAGAATGATCAGACAGATAATGCTGAGGGGGCCACACTGCTaGGCACCTTCACAAACTTGC +
Preference number: 5 (lower is better)
Translates to: TLEQYLGVSARMIRQIMLRGPHC*APSQTC
Trigger: GCAAGTTTGTGAAGGTGCCAAGCAGTGTGGCCCCCT...CAGCATTATCTGTCTGATCATTCTGGCAGAAACCCCAAGATATTGCTCAAGGGT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp TTTTCCTTTTTCGTCATTTCTGGGTGGGTTTCCGTGTGCGCTCCGGGTTGGCACCAGGAAGTTCTCCTTTaGAACCGTTTCCCAGGTAAT +
Preference number: 5 (lower is better)
Translates to: FSFFVISGWVSVCAPGWHQEVLL*NRFPGN
Trigger: ATTACCTGGGAAACGGTTCAAAAGGAGAACTTCCTG...GTGCCAACCCGGAGCGCACACGGAAACCCACCCAGAAATGACGAAAAAGGAAAA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000148715.8
CDS-3UTR CAA 90 bp TGGCTCCGCCTTTTCCTTTTTCGTCATTTCTGGGTGGGTTTCCGTGTGCGCTCCTGTGATTCCAGACACTaGATCCTCTTTTCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: WLRLFLFRHFWVGFRVRSCDSRH*ILFSCS
Trigger: AGAGCAAGAAAAGAGGATCAAGTGTCTGGAATCACA...GGAGCGCACACGGAAACCCACCCAGAAATGACGAAAAAGGAAAAGGCGGAGCCA
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000148715.8
CDS GCA 90 bp TTGTTCCAGTTGTCTTCCACATACAGAGTGAATTTCTTCACCAGGTaGGTGTCCTCATCTGTGAAGAAGCCCTGTCGGATTTCCTCCAGC +
Preference number: 5 (lower is better)
Translates to: LFQLSSTYRVNFFTR*VSSSVKKPCRISSS
Trigger: GCTGGAGGAAATCCGACAGGGCTTCTTCACAGATGAGGACACGCACCTGGTGAAGAAATTCACTCTGTATGTGGAAGACAACTGGAACAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp ATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGAGTTTCATTCTCTTAGGCCAGACCCTCCGAAGTaGATCTCTCCCCTGCATAGG +
Preference number: 5 (lower is better)
Translates to: ILLRLPNRCQRHEFHSLRPDPPK*ISPLHR
Trigger: CCTATGCAGGGGAGAGATCAACTTCGGAGGGTCTGG...CCTAAGAGAATGAAACTCATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp ACCCTTGAGCAATATCTTGGGGTTTCTGCCAGAATGATCAGACAGATAATGCTGTCATGCAGGAAGTCTTaGAGTACGCGGGAGACCTCG +
Preference number: 5 (lower is better)
Translates to: TLEQYLGVSARMIRQIMLSCRKS*STRETS
Trigger: CGAGGTCTCCCGCGTACTCAAAGACTTCCTGCATGA...CAGCATTATCTGTCTGATCATTCTGGCAGAAACCCCAAGATATTGCTCAAGGGT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp TTGAACCGTTTCCCAGGTAATGATCTTCTGGTCCAAGGGGTCAGGCAAGTCTCTATTTCCTTTATGATCTaGCAGGCAGCCAGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: LNRFPGNDLLVQGVRQVSISFMI*QAARAA
Trigger: TGCTGCTCTGGCTGCCTGCAAGATCATAAAGGAAAT...AGAGACTTGCCTGACCCCTTGGACCAGAAGATCATTACCTGGGAAACGGTTCAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS GCA 90 bp GTATTCAACGATGAGGTGGTAGCGTTGAAACTTCCAGAACATGTCTaGATTGCCTTGCACCACCTGGAATGTGTAGCTGAACATGGCGAT +
Preference number: 5 (lower is better)
Translates to: VFNDEVVALKLPEHV*IALHHLECVAEHGD
Trigger: ATCGCCATGTTCAGCTACACATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAACGCTACCACCTCATCGTTGAATAC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp ACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATCTTGGGATGAAGTGGGAGAGATaGCTGTCCAGGGGGCAGAGG +
Preference number: 5 (lower is better)
Translates to: TGFIESKVALGTLEQYLGMKWER*LSRGQR
Trigger: CCTCTGCCCCCTGGACAGCAATCTCTCCCACTTCAT...CCCAAGATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGT
48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp ACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATCTTGGGGTAGTCTTGGGCTTCTaGGCTGTGGCTCTTGCAGGC +
Preference number: 5 (lower is better)
Translates to: TGFIESKVALGTLEQYLGVVLGF*AVALAG
Trigger: GCCTGCAAGAGCCACAGCCAAGAAGCCCAAGACTAC...CCCAAGATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp GGAGGTAATTACAATAGATCTGAGTCCTGCCCTCTAGGAGCTGGTCAGCTAATGCATTCCACGTCCCCATaGAAGATTTCACTCTTGGCA +
Preference number: 5 (lower is better)
Translates to: GGNYNRSESCPLGAGQLMHSTSP*KISLLA
Trigger: TGCCAAGAGTGAAATCTTCAATGGGGACGTGGAATG...CATTAGCTGACCAGCTCCTAGAGGGCAGGACTCAGATCTATTGTAATTACCTCC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp GGTAGCGTTGAAACTTCCAGAACATGTCTGCATTGCCTTGCACCACCTGGAATGTCACACTTGTTCCAGTaGTCTTCCACATACAGAGTG +
Preference number: 5 (lower is better)
Translates to: GSVETSRTCLHCLAPPGMSHLFQ*SSTYRV
Trigger: CACTCTGTATGTGGAAGACAACTGGAACAAGTGTGA...CATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAACGCTACC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000150867.2
CDS-3UTR CAA 90 bp ACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATCTTGGGGGCACCTTCACAAACTaGCCTCGCTTCTTCCCAGAC +
Preference number: 5 (lower is better)
Translates to: TGFIESKVALGTLEQYLGGTFTN*PRFFPD
Trigger: GTCTGGGAAGAAGCGAGGCAAGTTTGTGAAGGTGCC...CCCAAGATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp CCAGCTGTCCAGTCCAAGCCAGTGAAAGCTTTAGTGGGACATGAAAAATCTTGCTCACACTTGTTCCAGTaGTCTTCCACATACAGAGTG +
Preference number: 5 (lower is better)
Translates to: PAVQSKPVKALVGHEKSCSHLFQ*SSTYRV
Trigger: CACTCTGTATGTGGAAGACAACTGGAACAAGTGTGA...GCAAGATTTTTCATGTCCCACTAAAGCTTTCACTGGCTTGGACTGGACAGCTGG
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp ACCCTTGAGCAATATCTTGGGGTTTCTGCCAGAATGATCAGACAGATAATGCTGCAGAACATGTCTGCATaGCCTTGCACCACCTGGAAT +
Preference number: 5 (lower is better)
Translates to: TLEQYLGVSARMIRQIMLQNMSA*PCTTWN
Trigger: ATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTG...CAGCATTATCTGTCTGATCATTCTGGCAGAAACCCCAAGATATTGCTCAAGGGT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp AATTGTGTGGCTTTTTCCGGGCCCCACTCAAAGAGTTCTGTCCAAACAGTCCTGTGTGATTCCAGACACTaGATCCTCTTTTCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: NCVAFSGPHSKSSVQTVLCDSRH*ILFSCS
Trigger: AGAGCAAGAAAAGAGGATCAAGTGTCTGGAATCACA...CAGGACTGTTTGGACAGAACTCTTTGAGTGGGGCCCGGAAAAAGCCACACAATT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000136602.8
CDS-3UTR CAA 90 bp TGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATTCTTGGCTGTGGCTCTaGCAGGCTTTCACAAGTGCC +
Preference number: 5 (lower is better)
Translates to: WSTGFIESKVALGTLEQYSWLWL*QAFTSA
Trigger: GGCACTTGTGAAAGCCTGCAAGAGCCACAGCCAAGA...ATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp TGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATGTGTTGGGGTCACCATaGACCAACAGGCAAAGGACA +
Preference number: 5 (lower is better)
Translates to: WSTGFIESKVALGTLEQYVLGSP*TNRQRT
Trigger: TGTCCTTTGCCTGTTGGTCAATGGTGACCCCAACAC...ATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp ATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGAGTTTCATTCTCTTAGGATTTCCTTTATGATCTaGCAGGCAGCCAGAGCAGCA +
Preference number: 5 (lower is better)
Translates to: ILLRLPNRCQRHEFHSLRISFMI*QAARAA
Trigger: TGCTGCTCTGGCTGCCTGCAAGATCATAAAGGAAAT...CCTAAGAGAATGAAACTCATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTAT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp ACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATCTTGGGCATGTCTGCATTGCCTaGCACCACCTGGAATGTGTA +
Preference number: 5 (lower is better)
Translates to: TGFIESKVALGTLEQYLGHVCIA*HHLECV
Trigger: TACACATTCCAGGTGGTGCAAGGCAATGCAGACATG...CCCAAGATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp ACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATCTTGGGGATGAGGTGGTAGCGTaGAAACTTCCAGAACATGTC +
Preference number: 5 (lower is better)
Translates to: TGFIESKVALGTLEQYLGDEVVA*KLPEHV
Trigger: GACATGTTCTGGAAGTTTCAACGCTACCACCTCATC...CCCAAGATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp ATACTTCTGAGGCTCCCGAATAGATGCCAAAGACATGAGTTTCATTCTCTTAGGTGTGATTCCAGACACTaGATCCTCTTTTCTTGCTCT +
Preference number: 5 (lower is better)
Translates to: ILLRLPNRCQRHEFHSLRCDSRH*ILFSCS
Trigger: AGAGCAAGAAAAGAGGATCAAGTGTCTGGAATCACA...CCTAAGAGAATGAAACTCATGTCTTTGGCATCTATTCGGGAGCCTCAGAAGTAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS-3UTR CAA 90 bp TGGTCTACAGGCTTTATAGAAAGTAAAGTAGCATTGGGTACCCTTGAGCAATATCAGGAAGTTCTCCTTTaGAACCGTTTCCCAGGTAAT +
Preference number: 5 (lower is better)
Translates to: WSTGFIESKVALGTLEQYQEVLL*NRFPGN
Trigger: ATTACCTGGGAAACGGTTCAAAAGGAGAACTTCCTG...ATATTGCTCAAGGGTACCCAATGCTACTTTACTTTCTATAAAGCCTGTAGACCA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS CCA 72 bp AAGGCAGGCAGACCAATGGGCAGCTCCCGAGCCTGCTaGGCACCCAGGCCGGCCAGTGTCAGCCTACCCTCC +
Preference number: 6 (lower is better)
Translates to: KAGRPMGSSRAC*APRPASVSLPS
Trigger: GGAGGGTAGGCTGACACTGGCCGGCCTGGGTGCCCAGCAGGCTCGGGAGCTGCCCATTGGTCTGCCTGCCTT
69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 72 bp GTCTGGCAGCCACTTCTGGCCTGCGGGCCGCTTAGGTaGCCCTCTCTCCTCCATCCTGCGCCCGTCCTGGTA +
Preference number: 6 (lower is better)
Translates to: VWQPLLACGPLR*PSLLHPAPVLV
Trigger: TACCAGGACGGGCGCAGGATGGAGGAGAGAGGGCCACCTAAGCGGCCCGCAGGCCAGAAGTGGCTGCCAGAC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 72 bp CGTACAGCTTGTCCAACATGGCGGGCCAGGCCCACGTaGAGGGCACTGGTCAGGATCCAGGCACCTGTGCTC +
Preference number: 6 (lower is better)
Translates to: RTACPTWRARPT*RALVRIQAPVL
Trigger: GAGCACAGGTGCCTGGATCCTGACCAGTGCCCTCCACGTGGGCCTGGCCCGCCATGTTGGACAAGCTGTACG
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS GCA 72 bp CCAGGGCCAGCTGCTCATACTTGGCCTCACGCATGGTaGGGGCCACCTCTGCCTCTTTCTCCAGGTGGGACA +
Preference number: 6 (lower is better)
Translates to: PGPAAHTWPHAW*GPPLPLSPGGT
Trigger: TGTCCCACCTGGAGAAAGAGGCAGAGGTGGCCCGCACCATGCGTGAGGCCAAGTATGAGCAGCTGGCCCTGG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 72 bp GATCCAGGGCCAGCTGCTCATACTTGGCCTCACGCATaGTGCGGGCCACCTCTGCCTCTTTCTCCAGGTGGG +
Preference number: 6 (lower is better)
Translates to: DPGPAAHTWPHA*CGPPLPLSPGG
Trigger: CCCACCTGGAGAAAGAGGCAGAGGTGGCCCGCACCATGCGTGAGGCCAAGTATGAGCAGCTGGCCCTGGATC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 72 bp CAGTCACAGGAGCGCCCCAGAACTTCCTCCACCGTGTaGGCAGGAAGGCAGCTTGTGGGCCTAGATCGCCTG +
Preference number: 6 (lower is better)
Translates to: QSQERPRTSSTV*AGRQLVGLDRL
Trigger: CAGGCGATCTAGGCCCACAAGCTGCCTTCCTGCTCACACGGTGGAGGAAGTTCTGGGGCGCTCCTGTGACTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS GCA 72 bp ACTCTTCCTACTGAGGTCTGGCAGCCACTTCTGGCCTaGGGGCCGCTTAGGTGGCCCTCTCTCCTCCATCCT +
Preference number: 6 (lower is better)
Translates to: TLPTEVWQPLLA*GPLRWPSLLHP
Trigger: AGGATGGAGGAGAGAGGGCCACCTAAGCGGCCCGCAGGCCAGAAGTGGCTGCCAGACCTCAGTAGGAAGAGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS GCA 72 bp CATCAGCTTCAGTGGCCAGGTGCAGGCACGTGGTCCTaGTCCAGCTGTGGTTCCTTCGCACCAGCAGGGCAA +
Preference number: 6 (lower is better)
Translates to: HQLQWPGAGTWS*SSCGSFAPAGQ
Trigger: TTGCCCTGCTGGTGCGAAGGAACCACAGCTGGAGCAGGACCACGTGCCTGCACCTGGCCACTGAAGCTGATG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 72 bp TCTTCACTCTTCCTACTGAGGTCTGGCAGCCACTTCTaGCCTGCGGGCCGCTTAGGTGGCCCTCTCTCCTCC +
Preference number: 6 (lower is better)
Translates to: SSLFLLRSGSHF*PAGRLGGPLSS
Trigger: GGAGGAGAGAGGGCCACCTAAGCGGCCCGCAGGCCAGAAGTGGCTGCCAGACCTCAGTAGGAAGAGTGAAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 72 bp GTCCCTCCAAGGGTCTTCACTCTTCCTACTGAGGTCTaGCAGCCACTTCTGGCCTGCGGGCCGCTTAGGTGG +
Preference number: 6 (lower is better)
Translates to: VPPRVFTLPTEV*QPLLACGPLRW
Trigger: CCACCTAAGCGGCCCGCAGGCCAGAAGTGGCTGCCAGACCTCAGTAGGAAGAGTGAAGACCCTTGGAGGGAC
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 72 bp GAGGGTAACCTCGGATCCAGACGGCCCCTGGGGTGGTaGCCTGAAGTCCACCAGCAGGACATAGGTGAACAG +
Preference number: 6 (lower is better)
Translates to: EGNLGSRRPLGW*PEVHQQDIGEQ
Trigger: CTGTTCACCTATGTCCTGCTGGTGGACTTCAGGCCACCACCCCAGGGGCCGTCTGGATCCGAGGTTACCCTC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 90 bp GCCACCTCTGCCTCTTTCTCCAGGTGGGACATTTCCTTTATGATCTaGCAGGCAGCCAGAGCAGCAGCCACACCCTCCCGGCCCATGGCC +
Preference number: 6 (lower is better)
Translates to: ATSASFSRWDISFMI*QAARAAATPSRPMA
Trigger: GGCCATGGGCCGGGAGGGTGTGGCTGCTGCTCTGGCTGCCTGCAAGATCATAAAGGAAATGTCCCACCTGGAGAAAGAGGCAGAGGTGGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 72 bp CAGGAAGTCTTTGAGTACGCGGGAGACCTCGTGGAGTaGGAAGGCAGGCAGACCAATGGGCAGCTCCCGAGC +
Preference number: 6 (lower is better)
Translates to: QEVFEYAGDLVE*EGRQTNGQLPS
Trigger: GCTCGGGAGCTGCCCATTGGTCTGCCTGCCTTCTCACTCCACGAGGTCTCCCGCGTACTCAAAGACTTCCTG
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS GCA 72 bp GCACCCAGGCCGGCCAGTGTCAGCCTACCCTCCTCATaGTTACGCTGCAGCAGTTCAAAGAGGAGGCTCTTG +
Preference number: 6 (lower is better)
Translates to: APRPASVSLPSS*LRCSSSKRRLL
Trigger: CAAGAGCCTCCTCTTTGAACTGCTGCAGCGTAAGCATGAGGAGGGTAGGCTGACACTGGCCGGCCTGGGTGC
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 72 bp TTCCTCACCCACCAGGGACACCACCAGGTTGGGGGCTaGCAGGTGCCACTCGGTGAGCAGGAGTTCAAAAAG +
Preference number: 6 (lower is better)
Translates to: FLTHQGHHQVGG*QVPLGEQEFKK
Trigger: CTTTTTGAACTCCTGCTCACCGAGTGGCACCTGCCAGCCCCCAACCTGGTGGTGTCCCTGGTGGGTGAGGAA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 72 bp GGAAGGCAGCTTGTGGGCCTAGATCGCCTGGAGCCCTaGGTGCCTCTGTTAGCTTCTCCAATTGGCCACCCC +
Preference number: 6 (lower is better)
Translates to: GRQLVGLDRLEP*VPLLASPIGHP
Trigger: GGGGTGGCCAATTGGAGAAGCTAACAGAGGCACCAAGGGCTCCAGGCGATCTAGGCCCACAAGCTGCCTTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 72 bp GGTAGAAGCCACGGCAGGCGTCATGCAGGAAGTCTTTaGGTACGCGGGAGACCTCGTGGAGTGAGAAGGCAG +
Preference number: 6 (lower is better)
Translates to: GRSHGRRHAGSL*VRGRPRGVRRQ
Trigger: CTGCCTTCTCACTCCACGAGGTCTCCCGCGTACTCAAAGACTTCCTGCATGACGCCTGCCGTGGCTTCTACC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 72 bp CAGCCACACCCTCCCGGCCCATGGCCCAGAAGTATGTaGCCATCTCATAACGATTCTGCAGCACAGCCCAGA +
Preference number: 6 (lower is better)
Translates to: QPHPPGPWPRSM*PSHNDSAAQPR
Trigger: TCTGGGCTGTGCTGCAGAATCGTTATGAGATGGCCACATACTTCTGGGCCATGGGCCGGGAGGGTGTGGCTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 72 bp CCAAACGGCCATCATGGGGATGCAGCAGGGCCTGAGTaGTCACACCATAGGCCACAAGCCATACGCTCAGGA +
Preference number: 6 (lower is better)
Translates to: PNGHHGDAAGPE*SHHRPQAIRSG
Trigger: TCCTGAGCGTATGGCTTGTGGCCTATGGTGTGACCACTCAGGCCCTGCTGCATCCCCATGATGGCCGTTTGG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS GCA 72 bp TTCGCACCAGCAGGGCAAAGGCACGGTCCTCACTGTTaGCGTAGCACTCTGAGAAAAGATCCAGGGCCAGCT +
Preference number: 6 (lower is better)
Translates to: FAPAGQRHGPHC*RSTLRKDPGPA
Trigger: AGCTGGCCCTGGATCTTTTCTCAGAGTGCTACGGCAACAGTGAGGACCGTGCCTTTGCCCTGCTGGTGCGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 72 bp ACGGAGGGGGCCACACTGCTTGGCACCTTCACAAACTaGCCTCGCTTCTTCCCAGACCCTCCGAAGTTGATC +
Preference number: 6 (lower is better)
Translates to: TEGATLLGTFTN*PRFFPDPPKLI
Trigger: GATCAACTTCGGAGGGTCTGGGAAGAAGCGAGGCAAGTTTGTGAAGGTGCCAAGCAGTGTGGCCCCCTCCGT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 72 bp GCCTCTTTCTCCAGGTGGGACATTTCCTTTATGATCTaGCAGGCAGCCAGAGCAGCAGCCACACCCTCCCGG +
Preference number: 6 (lower is better)
Translates to: ASFSRWDISFMI*QAARAAATPSR
Trigger: CCGGGAGGGTGTGGCTGCTGCTCTGGCTGCCTGCAAGATCATAAAGGAAATGTCCCACCTGGAGAAAGAGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 90 bp GGCACCTTCACAAACTTGCCTCGCTTCTTCCCAGACCCTCCGAAGTaGATCTCTCCCCTGCATAGGATGGGCTCCCAGCCATCCTCAGTA +
Preference number: 6 (lower is better)
Translates to: GTFTNLPRFFPDPPK*ISPLHRMGSQPSSV
Trigger: TACTGAGGATGGCTGGGAGCCCATCCTATGCAGGGGAGAGATCAACTTCGGAGGGTCTGGGAAGAAGCGAGGCAAGTTTGTGAAGGTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 90 bp TCTTGGGCTTCTTGGCTGTGGCTCTTGCAGGCTTTCACAAGTGCCTaGAGGATGACAGTGTCCAGGTCCTCCGAACCCTCCTGCTCGAAG +
Preference number: 6 (lower is better)
Translates to: SWASWLWLLQAFTSA*RMTVSRSSEPSCSK
Trigger: CTTCGAGCAGGAGGGTTCGGAGGACCTGGACACTGTCATCCTCAAGGCACTTGTGAAAGCCTGCAAGAGCCACAGCCAAGAAGCCCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 72 bp CAAACTTGCCTCGCTTCTTCCCAGACCCTCCGAAGTTaGTCTCTCCCCTGCATAGGATGGGCTCCCAGCCAT +
Preference number: 6 (lower is better)
Translates to: QTCLASSQTLRS*SLPCIGWAPSH
Trigger: ATGGCTGGGAGCCCATCCTATGCAGGGGAGAGATCAACTTCGGAGGGTCTGGGAAGAAGCGAGGCAAGTTTG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 72 bp GGCAAAGGCACGGTCCTCACTGTTGCCGTAGCACTCTaGGAAAAGATCCAGGGCCAGCTGCTCATACTTGGC +
Preference number: 6 (lower is better)
Translates to: GKGTVLTVAVAL*EKIQGQLLILG
Trigger: GCCAAGTATGAGCAGCTGGCCCTGGATCTTTTCTCAGAGTGCTACGGCAACAGTGAGGACCGTGCCTTTGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS GCA 72 bp GGCTTCTTGGCTGTGGCTCTTGCAGGCTTTCACAAGTaGCTTGAGGATGACAGTGTCCAGGTCCTCCGAACC +
Preference number: 6 (lower is better)
Translates to: GFLAVALAGFHK*LEDDSVQVLRT
Trigger: GGTTCGGAGGACCTGGACACTGTCATCCTCAAGGCACTTGTGAAAGCCTGCAAGAGCCACAGCCAAGAAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 72 bp TGGGTGTGCCTGTGGCCATGTCTCCCCACCAGATCTTaGTCAGGAATGCTTGCACACCGTCATGGGCAAAGA +
Preference number: 6 (lower is better)
Translates to: WVCLWPCLPTRS*SGMLAHRHGQR
Trigger: TCTTTGCCCATGACGGTGTGCAAGCATTCCTGACCAAGATCTGGTGGGGAGACATGGCCACAGGCACACCCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 72 bp ACAAACTTGCCTCGCTTCTTCCCAGACCCTCCGAAGTaGATCTCTCCCCTGCATAGGATGGGCTCCCAGCCA +
Preference number: 6 (lower is better)
Translates to: TNLPRFFPDPPK*ISPLHRMGSQP
Trigger: TGGCTGGGAGCCCATCCTATGCAGGGGAGAGATCAACTTCGGAGGGTCTGGGAAGAAGCGAGGCAAGTTTGT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 72 bp GCAGGAGTTCAAAAAGCACGGAGGGGGCCACACTGCTaGGCACCTTCACAAACTTGCCTCGCTTCTTCCCAG +
Preference number: 6 (lower is better)
Translates to: AGVQKARRGPHC*APSQTCLASSQ
Trigger: CTGGGAAGAAGCGAGGCAAGTTTGTGAAGGTGCCAAGCAGTGTGGCCCCCTCCGTGCTTTTTGAACTCCTGC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 72 bp TCTTGGCTGTGGCTCTTGCAGGCTTTCACAAGTGCCTaGAGGATGACAGTGTCCAGGTCCTCCGAACCCTCC +
Preference number: 6 (lower is better)
Translates to: SWLWLLQAFTSA*RMTVSRSSEPS
Trigger: GGAGGGTTCGGAGGACCTGGACACTGTCATCCTCAAGGCACTTGTGAAAGCCTGCAAGAGCCACAGCCAAGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 72 bp ATGGGTGTGCCTGTGGCCATGTCTCCCCACCAGATCTaGGTCAGGAATGCTTGCACACCGTCATGGGCAAAG +
Preference number: 6 (lower is better)
Translates to: MGVPVAMSPHQI*VRNACTPSWAK
Trigger: CTTTGCCCATGACGGTGTGCAAGCATTCCTGACCAAGATCTGGTGGGGAGACATGGCCACAGGCACACCCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 90 bp GCCATGTCAGCACCGCTGTCCACAAAGAGGCGGACAAAGTCAGGCTaGTTGCTCACGAGGGCATCTGTCATCACCTCTTCCAAGTCACAG +
Preference number: 6 (lower is better)
Translates to: AMSAPLSTKRRTKSG*LLTRASVITSSKSQ
Trigger: CTGTGACTTGGAAGAGGTGATGACAGATGCCCTCGTGAGCAACAAGCCTGACTTTGTCCGCCTCTTTGTGGACAGCGGTGCTGACATGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 72 bp CCTCTGCCTCTTTCTCCAGGTGGGACATTTCCTTTATaGTCTTGCAGGCAGCCAGAGCAGCAGCCACACCCT +
Preference number: 6 (lower is better)
Translates to: PLPLSPGGTFPL*SCRQPEQQPHP
Trigger: AGGGTGTGGCTGCTGCTCTGGCTGCCTGCAAGATCATAAAGGAAATGTCCCACCTGGAGAAAGAGGCAGAGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS GCA 72 bp CCAACAGGCAAAGGACAGGTATCTGGATGCAGCTGGTaGCCCCATAACCTGTCCTCTGCTGAGAGATGTGCT +
Preference number: 6 (lower is better)
Translates to: PTGKGQVSGCSW*PHNLSSAERCA
Trigger: AGCACATCTCTCAGCAGAGGACAGGTTATGGGGGCACCAGCTGCATCCAGATACCTGTCCTTTGCCTGTTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS GCA 72 bp TTGAGGATGACAGTGTCCAGGTCCTCCGAACCCTCCTaGTCGAAGTCATATACTGTGAGCAGGTGGGGGTGT +
Preference number: 6 (lower is better)
Translates to: LRMTVSRSSEPS*SKSYTVSRWGC
Trigger: ACACCCCCACCTGCTCACAGTATATGACTTCGAGCAGGAGGGTTCGGAGGACCTGGACACTGTCATCCTCAA
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 72 bp CAGGAGTTCAAAAAGCACGGAGGGGGCCACACTGCTTaGCACCTTCACAAACTTGCCTCGCTTCTTCCCAGA +
Preference number: 6 (lower is better)
Translates to: QEFKKHGGGHTA*HLHKLASLLPR
Trigger: TCTGGGAAGAAGCGAGGCAAGTTTGTGAAGGTGCCAAGCAGTGTGGCCCCCTCCGTGCTTTTTGAACTCCTG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 90 bp ATGTCAGCACCGCTGTCCACAAAGAGGCGGACAAAGTCAGGCTTGTaGCTCACGAGGGCATCTGTCATCACCTCTTCCAAGTCACAGGAC +
Preference number: 6 (lower is better)
Translates to: MSAPLSTKRRTKSGL*LTRASVITSSKSQD
Trigger: GTCCTGTGACTTGGAAGAGGTGATGACAGATGCCCTCGTGAGCAACAAGCCTGACTTTGTCCGCCTCTTTGTGGACAGCGGTGCTGACAT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 72 bp CCCTGGAAATCCTCTCTAGGGTGTTGGGGTCACCATTaGCCAACAGGCAAAGGACAGGTATCTGGATGCAGC +
Preference number: 6 (lower is better)
Translates to: PWKSSLGCWGHH*PTGKGQVSGCS
Trigger: GCTGCATCCAGATACCTGTCCTTTGCCTGTTGGTCAATGGTGACCCCAACACCCTAGAGAGGATTTCCAGGG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 72 bp CTTCCCAAGAGAAACACTCGCTGGGGAATTTCTCTCTaGACTGCTTCTCAGCCACCTGGGGCACCAGGAGAT +
Preference number: 6 (lower is better)
Translates to: LPKRNTRWGISL*TASQPPGAPGD
Trigger: ATCTCCTGGTGCCCCAGGTGGCTGAGAAGCAGTTCAGAGAGAAATTCCCCAGCGAGTGTTTCTCTTGGGAAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS GCA 72 bp AGGAAGCTCTTTTCCATATCCAAGCTGTCTGGCTCCTaGAGATCTTCTAGGTCCATCCTCTGCGGGGCATCC +
Preference number: 6 (lower is better)
Translates to: RKLFSISKLSGS*RSSRSILCGAS
Trigger: GGATGCCCCGCAGAGGATGGACCTAGAAGATCTGCAGGAGCCAGACAGCTTGGATATGGAAAAGAGCTTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS GCA 72 bp GTGCCTCTGTTAGCTTCTCCAATTGGCCACCCCGGCTaGATAGGAAGCTCTTTTCCATATCCAAGCTGTCTG +
Preference number: 6 (lower is better)
Translates to: VPLLASPIGHPG*IGSSFPYPSCL
Trigger: CAGACAGCTTGGATATGGAAAAGAGCTTCCTATGCAGCCGGGGTGGCCAATTGGAGAAGCTAACAGAGGCAC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 72 bp GAACCCTCCTGCTCGAAGTCATATACTGTGAGCAGGTaGGGGTGTGCAGCAATGTTCTGTAACAGCTCTGTC +
Preference number: 6 (lower is better)
Translates to: EPSCSKSYTVSR*GCAAMFCNSSV
Trigger: GACAGAGCTGTTACAGAACATTGCTGCACACCCCCACCTGCTCACAGTATATGACTTCGAGCAGGAGGGTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 72 bp TTAGGGCAGGAAGCCGAGCTTTCCAGCAGCAGAGGGTaGAGAGAACAGTTCACACGAGCCTCATCAATTTCA +
Preference number: 6 (lower is better)
Translates to: LGQEAELSSSRG*REQFTRASSIS
Trigger: TGAAATTGATGAGGCTCGTGTGAACTGTTCTCTTCACCCTCTGCTGCTGGAAAGCTCGGCTTCCTGCCCTAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 90 bp CCCACAATGAACAGGAAGATGGCCACCATGTCACACTTGTTCCAGTaGTCTTCCACATACAGAGTGAATTTCTTCACCAGGTGCGTGTCC +
Preference number: 6 (lower is better)
Translates to: PTMNRKMATMSHLFQ*SSTYRVNFFTRCVS
Trigger: GGACACGCACCTGGTGAAGAAATTCACTCTGTATGTGGAAGACAACTGGAACAAGTGTGACATGGTGGCCATCTTCCTGTTCATTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 90 bp GATGAGGTGGTAGCGTTGAAACTTCCAGAACATGTCTGCATTGCCTaGCACCACCTGGAATGTGTAGCTGAACATGGCGATCAGAAGGTT +
Preference number: 6 (lower is better)
Translates to: DEVVALKLPEHVCIA*HHLECVAEHGDQKV
Trigger: AACCTTCTGATCGCCATGTTCAGCTACACATTCCAGGTGGTGCAAGGCAATGCAGACATGTTCTGGAAGTTTCAACGCTACCACCTCATC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000009390.10
CDS CAA 90 bp CAGGTGACTCCCACAATGAACAGGAAGATGGCCACCATGTCACACTaGTTCCAGTTGTCTTCCACATACAGAGTGAATTTCTTCACCAGG +
Preference number: 6 (lower is better)
Translates to: QVTPTMNRKMATMSH*FQLSSTYRVNFFTR
Trigger: CCTGGTGAAGAAATTCACTCTGTATGTGGAAGACAACTGGAACAAGTGTGACATGGTGGCCATCTTCCTGTTCATTGTGGGAGTCACCTG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CCA 72 bp CAGCAATGTTCTGTAACAGCTCTGTCCAGTGTACAATaGCTTCCCAAGAGAAACACTCGCTGGGGAATTTCT +
Preference number: 6 (lower is better)
Translates to: QQCSVTALSSVQ*LPKRNTRWGIS
Trigger: AGAAATTCCCCAGCGAGTGTTTCTCTTGGGAAGCCATTGTACACTGGACAGAGCTGTTACAGAACATTGCTG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS TCA 72 bp CGCTCTACAATGATGATCTTAGGACCCAACTGCTTGTaGATAGCAAAGATGTGGATGAGCCGAAGTGTGAAC +
Preference number: 6 (lower is better)
Translates to: RSTMMILGPNCL*IAKMWMSRSVN
Trigger: GTTCACACTTCGGCTCATCCACATCTTTGCTATTCACAAGCAGTTGGGTCCTAAGATCATCATTGTAGAGCG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 72 bp AACAGGAAGATGGCCACCATGTCACACTTGTTCCAGTaGTCTTCCACATACAGAGTGAATTTCTTCACCAGG +
Preference number: 6 (lower is better)
Translates to: NRKMATMSHLFQ*SSTYRVNFFTR
Trigger: CCTGGTGAAGAAATTCACTCTGTATGTGGAAGACAACTGGAACAAGTGTGACATGGTGGCCATCTTCCTGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2
CDS CAA 72 bp CCCACAATGAACAGGAAGATGGCCACCATGTCACACTaGTTCCAGTTGTCTTCCACATACAGAGTGAATTTC +
Preference number: 6 (lower is better)
Translates to: PTMNRKMATMSH*FQLSSTYRVNF
Trigger: GAAATTCACTCTGTATGTGGAAGACAACTGGAACAAGTGTGACATGGTGGCCATCTTCCTGTTCATTGTGGG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000009390.10
ENSMUST00000150867.2