RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRPM4 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000038260

Ensembl transcript IDs: ENSMUST00000042194.10, ENSMUST00000209506.2, ENSMUST00000210311.2, ENSMUST00000210541.2, ENSMUST00000211431.2, ENSMUST00000211743.2

Found 306 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR GCA 90 bp CAGTCACTGGGGCACCCCAGAAGTCCGACCAGCGCTTGGAGAACTTaGCACAGCAGAGGGCACGTCCTGGCCGTCGCCGCTGCCGCCTCT +
Preference number: 1 (lower is better)
Translates to: QSLGHPRSPTSAWRT*HSRGHVLAVAAAAS
Trigger: AGAGGCGGCAGCGGCGACGGCCAGGACGTGCCCTCTGCTGTGGCAAGTTCTCCAAGCGCTGGTCGGACTTCTGGGGTGCCCCAGTGACTG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 90 bp CCAGGAAGGCAGTCACTGGGGCACCCCAGAAGTCCGACCAGCGCTTaGAGAACTTGCCACAGCAGAGGGCACGTCCTGGCCGTCGCCGCT +
Preference number: 1 (lower is better)
Translates to: PGRQSLGHPRSPTSA*RTCHSRGHVLAVAA
Trigger: AGCGGCGACGGCCAGGACGTGCCCTCTGCTGTGGCAAGTTCTCCAAGCGCTGGTCGGACTTCTGGGGTGCCCCAGTGACTGCCTTCCTGG
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 90 bp CTCCCAGTGCTGGCTGTCTGGTGGTCCCTTACAGCCACACCCACGTaGCGGCCAATGCCTGTGTGCAGTCCCCCAGTGACGATCCAGGCC +
Preference number: 1 (lower is better)
Translates to: LPVLAVWWSLTATPT*RPMPVCSPPVTIQA
Trigger: GGCCTGGATCGTCACTGGGGGACTGCACACAGGCATTGGCCGGCACGTGGGTGTGGCTGTAAGGGACCACCAGACAGCCAGCACTGGGAG
66% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210541.2
3UTR CCA 90 bp GCCACACCCATGGCCACCACCTTGCTGCTCCCAGTGCTGGCTGTCTaGTGGTCCCTTACAGCCACACCCACGTGCCGGCCAATGCCTGTG +
Preference number: 1 (lower is better)
Translates to: ATPMATTLLLPVLAV*WSLTATPTCRPMPV
Trigger: CACAGGCATTGGCCGGCACGTGGGTGTGGCTGTAAGGGACCACCAGACAGCCAGCACTGGGAGCAGCAAGGTGGTGGCCATGGGTGTGGC
66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210541.2
3UTR CCA 90 bp TCAGCATGTCTCTGTTCCGGACCACTCCCCAGGGGGCCACACCCATaGCCACCACCTTGCTGCTCCCAGTGCTGGCTGTCTGGTGGTCCC +
Preference number: 1 (lower is better)
Translates to: SACLCSGPLPRGPHP*PPPCCSQCWLSGGP
Trigger: GGGACCACCAGACAGCCAGCACTGGGAGCAGCAAGGTGGTGGCCATGGGTGTGGCCCCCTGGGGAGTGGTCCGGAACAGAGACATGCTGA
66% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210541.2
3UTR GCA 90 bp GGTGGCCTCTCCCCAGAGGGGACAGCGGCGCAGAAGAAGGCGGGCTaGTCGCTCTTCACTGTTGTGGTAACACTCTCCAAAGAGGTCCAC +
Preference number: 1 (lower is better)
Translates to: GGLSPEGTAAQKKAG*SLFTVVVTLSKEVH
Trigger: GTGGACCTCTTTGGAGAGTGTTACCACAACAGTGAAGAGCGAGCAGCCCGCCTTCTTCTGCGCCGCTGTCCCCTCTGGGGAGAGGCCACC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR TCA 90 bp CAGGAAGCAGGTGAGTGCCAGCAGGTCACATTGGTTCCAGGTATCTaGGAGGTAGAGGTGCAGCCGATGGCGCAGGGGAGCTCTGTCCGG +
Preference number: 1 (lower is better)
Translates to: QEAGECQQVTLVPGI*EVEVQPMAQGSSVR
Trigger: CCGGACAGAGCTCCCCTGCGCCATCGGCTGCACCTCTACCTCTCAGATACCTGGAACCAATGTGACCTGCTGGCACTCACCTGCTTCCTG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 90 bp TGGGCCAGACGCACGGGGGTCAGGAAGTGTCCCAGGCTAAGGCCATaGGAGATGAGCAGGCGCACAAATTCAGGCCGGTCATTCAGCAGA +
Preference number: 1 (lower is better)
Translates to: WARRTGVRKCPRLRP*EMSRRTNSGRSFSR
Trigger: TCTGCTGAATGACCGGCCTGAATTTGTGCGCCTGCTCATCTCCCATGGCCTTAGCCTGGGACACTTCCTGACCCCCGTGCGTCTGGCCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR TCA 90 bp GTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTaGTTCACCCAAGGTGAGGCTGCTCTGGGAAGGAGTCCCTCGGTG +
Preference number: 1 (lower is better)
Translates to: VWLGPQRGQLCQLRA*FTQGEAALGRSPSV
Trigger: CACCGAGGGACTCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACAC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR CCA 90 bp AGAAGATTTCGGATCAGTGAGTTAGGGGACACCGCGCTGTACAGCTaGGCCAGACGCACGGGGGTCAGGAAGTGTCCCAGGCTAAGGCCA +
Preference number: 1 (lower is better)
Translates to: RRFRISELGDTALYS*ARRTGVRKCPRLRP
Trigger: TGGCCTTAGCCTGGGACACTTCCTGACCCCCGTGCGTCTGGCCCAGCTGTACAGCGCGGTGTCCCCTAACTCACTGATCCGAAATCTTCT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 90 bp GGCAGAATGGACCCAGGATTTCCAGGGAGAGTCTGGTTGTACGTCTaGCCGTGTTCCAACATGGCTCTACACCCAGAGAGGCCCCGGAGC +
Preference number: 1 (lower is better)
Translates to: GRMDPGFPGRVWLYV*PCSNMALHPERPRS
Trigger: GCTCCGGGGCCTCTCTGGGTGTAGAGCCATGTTGGAACACGGCCAGACGTACAACCAGACTCTCCCTGGAAATCCTGGGTCCATTCTGCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR TCA 90 bp GTTGGACCTCTCTCTCCAGCCCCCTCAGACGCCGATCGTACTCTCTaGTCTGTCCCAGCTGCTTCAGTGCAGTGTCCACCTTCTGAGACG +
Preference number: 1 (lower is better)
Translates to: VGPLSPAPSDADRTL*SVPAASVQCPPSET
Trigger: CGTCTCAGAAGGTGGACACTGCACTGAAGCAGCTGGGACAGATCAGAGAGTACGATCGGCGTCTGAGGGGGCTGGAGAGAGAGGTCCAAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 90 bp CAGGGCAGGCCTCGAATGGAATTCCCGGATGAGGCTGTAGCGCTGTaGCTTCCAGTAGAGGTCGCTGTTGCCGTGCACTTTGCTGAAGGT +
Preference number: 1 (lower is better)
Translates to: QGRPRMEFPDEAVAL*LPVEVAVAVHFAEG
Trigger: ACCTTCAGCAAAGTGCACGGCAACAGCGACCTCTACTGGAAGGCACAGCGCTACAGCCTCATCCGGGAATTCCATTCGAGGCCTGCCCTG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 90 bp TGGTTCCTGCACCCCAGGACCCTCCTGCTTCCTCTGCTGTGTGGCTaGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCA +
Preference number: 1 (lower is better)
Translates to: WFLHPRTLLLPLLCG*AHKEANFASSELDS
Trigger: TGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGGAGGGTCCTGGGGTGCAGGAACCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR CCA 90 bp TGGCTAAGGGCCTCAGCCATCCAAGTCAGGACTCGAGAACAGTGTTaGACCTCTCTCTCCAGCCCCCTCAGACGCCGATCGTACTCTCTG +
Preference number: 1 (lower is better)
Translates to: WLRASAIQVRTREQC*TSLSSPLRRRSYSL
Trigger: CAGAGAGTACGATCGGCGTCTGAGGGGGCTGGAGAGAGAGGTCCAACACTGTTCTCGAGTCCTGACTTGGATGGCTGAGGCCCTTAGCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 90 bp GCGCACAAATTCAGGCCGGTCATTCAGCAGAGCATCCATGAGAGATaGCTCCAGGTGGAAGGACCGCCATTGGATGTCCCCACGGAAAAG +
Preference number: 1 (lower is better)
Translates to: AHKFRPVIQQSIHER*LQVEGPPLDVPTEK
Trigger: CTTTTCCGTGGGGACATCCAATGGCGGTCCTTCCACCTGGAGGCATCTCTCATGGATGCTCTGCTGAATGACCGGCCTGAATTTGTGCGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 90 bp CCTCAGACGCCGATCGTACTCTCTGATCTGTCCCAGCTGCTTCAGTaGAGTGTCCACCTTCTGAGACGTGCGTTTCAAACGCTCCGAGTC +
Preference number: 1 (lower is better)
Translates to: PQTPIVLSDLSQLLQ*SVHLLRRAFQTLRV
Trigger: GACTCGGAGCGTTTGAAACGCACGTCTCAGAAGGTGGACACTGCACTGAAGCAGCTGGGACAGATCAGAGAGTACGATCGGCGTCTGAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 90 bp CACCCAAACAGAGGCTCTGGGTCTAAGTCGGCAGCTGCAATGGTCTaGGGAAGGACAGATTCCCAACATCACACACCTGCTCCACAGGAG +
Preference number: 1 (lower is better)
Translates to: HPNRGSGSKSAAAMV*GRTDSQHHTPAPQE
Trigger: CTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGTCCTTCCCCAGACCATTGCAGCTGCCGACTTAGACCCAGAGCCTCTGTTTGGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
3UTR CCA 90 bp CAGCAACGTGAAGGCCCAGAAGTACAGCAGCAGCTCGGAGACACTTaGCTTTGTGGGCTGGAAATCCACCAGCAACACGTGGGCAAACAG +
Preference number: 1 (lower is better)
Translates to: QQREGPEVQQQLGDT*LCGLEIHQQHVGKQ
Trigger: CTGTTTGCCCACGTGTTGCTGGTGGATTTCCAGCCCACAAAGCCAAGTGTCTCCGAGCTGCTGCTGTACTTCTGGGCCTTCACGTTGCTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 90 bp GATTTCCAGGGAGAGTCTGGTTGTACGTCTGGCCGTGTTCCAACATaGCTCTACACCCAGAGAGGCCCCGGAGCTGGAATCCCTCCAATT +
Preference number: 1 (lower is better)
Translates to: DFQGESGCTSGRVPT*LYTQRGPGAGIPPI
Trigger: AATTGGAGGGATTCCAGCTCCGGGGCCTCTCTGGGTGTAGAGCCATGTTGGAACACGGCCAGACGTACAACCAGACTCTCCCTGGAAATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR TCA 90 bp ACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTaGGGCTGCTCTGGGAAGGAGTCCCTCGGTGATACTCGCAGTGTG +
Preference number: 1 (lower is better)
Translates to: TKRPTLPAQSLIHPR*GCSGKESLGDTRSV
Trigger: CACACTGCGAGTATCACCGAGGGACTCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR CCA 90 bp AAAGCCACCCAAACAGAGGCTCTGGGTCTAAGTCGGCAGCTGCAATaGTCTGGGGAAGGACAGATTCCCAACATCACACACCTGCTCCAC +
Preference number: 1 (lower is better)
Translates to: KATQTEALGLSRQLQ*SGEGQIPNITHLLH
Trigger: GTGGAGCAGGTGTGTGATGTTGGGAATCTGTCCTTCCCCAGACCATTGCAGCTGCCGACTTAGACCCAGAGCCTCTGTTTGGGTGGCTTT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
3UTR CCA 90 bp GTGCACACGTTTCTCCCAACAGAGTCCTCAGCACTTGCCCCACATTaGGAGGCCGGAGCTCTACAGTTCCATTTACAGGAGGGGATTTGC +
Preference number: 1 (lower is better)
Translates to: VHTFLPTESSALAPH*EAGALQFHLQEGIC
Trigger: GCAAATCCCCTCCTGTAAATGGAACTGTAGAGCTCCGGCCTCCCAATGTGGGGCAAGTGCTGAGGACTCTGTTGGGAGAAACGTGTGCAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 90 bp ACCGTTTGGGTTGGCAGAATGGACCCAGGATTTCCAGGGAGAGTCTaGTTGTACGTCTGGCCGTGTTCCAACATGGCTCTACACCCAGAG +
Preference number: 1 (lower is better)
Translates to: TVWVGRMDPGFPGRV*LYVWPCSNMALHPE
Trigger: CTCTGGGTGTAGAGCCATGTTGGAACACGGCCAGACGTACAACCAGACTCTCCCTGGAAATCCTGGGTCCATTCTGCCAACCCAAACGGT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR TCA 90 bp CTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAGGAGTCCCTCGGTaGTACTCGCAGTGTGTCTGGACAGCAACCCATAAGCATGGGATT +
Preference number: 1 (lower is better)
Translates to: LDSPKVRLLWEGVPR*YSQCVWTATHKHGI
Trigger: AATCCCATGCTTATGGGTTGCTGTCCAGACACACTGCGAGTATCACCGAGGGACTCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR TCA 90 bp TACTCTCTGATCTGTCCCAGCTGCTTCAGTGCAGTGTCCACCTTCTaGGACGTGCGTTTCAAACGCTCCGAGTCACTGTCTCGCTTGTCC +
Preference number: 1 (lower is better)
Translates to: YSLICPSCFSAVSTF*DVRFKRSESLSRLS
Trigger: GGACAAGCGAGACAGTGACTCGGAGCGTTTGAAACGCACGTCTCAGAAGGTGGACACTGCACTGAAGCAGCTGGGACAGATCAGAGAGTA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 90 bp CAAACCGAAGGCGGAAGCGGTTCTCACCACCCAGGCGGCCATAGGTaGCATCATCCACCAAGAAGAAAGCAGAATAGTTATAGTCCAGGG +
Preference number: 1 (lower is better)
Translates to: QTEGGSGSHHPGGHR*HHPPRRKQNSYSPG
Trigger: CCCTGGACTATAACTATTCTGCTTTCTTCTTGGTGGATGATGGCACCTATGGCCGCCTGGGTGGTGAGAACCGCTTCCGCCTTCGGTTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210541.2
ENSMUST00000211431.2
3UTR TCA 90 bp ACCGTCAGCAACTCCTTTCGGGTCATGATCCTCTCTACCTGGGCCTaGAGAACCTCAGGGTCTCCTTTAGGGAAGTATCGCCTAATCCGA +
Preference number: 1 (lower is better)
Translates to: TVSNSFRVMILSTWA*RTSGSPLGKYRLIR
Trigger: TCGGATTAGGCGATACTTCCCTAAAGGAGACCCTGAGGTTCTTCAGGCCCAGGTAGAGAGGATCATGACCCGAAAGGAGTTGCTGACGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 90 bp CTCAAGGGCCACCTTTGCAGAGGGTTCTACAGTCCCAGGAGGACCTaGTCCATTGATGCTGCTGTCCATATCAAAGTCAAGATCCTTCTG +
Preference number: 1 (lower is better)
Translates to: LKGHLCRGFYSPRRT*SIDAAVHIKVKILL
Trigger: CAGAAGGATCTTGACTTTGATATGGACAGCAGCATCAATGGAGCAGGTCCTCCTGGGACTGTAGAACCCTCTGCAAAGGTGGCCCTTGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR TCA 90 bp GGGTGGCATCCTCTATCCGCTTTAACATCTTCTCATCTCCATCGATaGGAAGAAGGAGCACTGGGATGTCAATTCCAGTCCCTCCCACTC +
Preference number: 1 (lower is better)
Translates to: GWHPLSALTSSHLHR*EEGALGCQFQSLPL
Trigger: GAGTGGGAGGGACTGGAATTGACATCCCAGTGCTCCTTCTTCTCATCGATGGAGATGAGAAGATGTTAAAGCGGATAGAGGATGCCACCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR TCA 90 bp ATGCATTTACCTACTCAAATCTGCATCATCTGTTTGTATGTTGCCTaGGCAGATGACAGCAGCGCCCACCCTCCTCTGGGACCAGCTCTC +
Preference number: 1 (lower is better)
Translates to: MHLPTQICIICLYVA*ADDSSAHPPLGPAL
Trigger: GAGAGCTGGTCCCAGAGGAGGGTGGGCGCTGCTGTCATCTGCTCAGGCAACATACAAACAGATGATGCAGATTTGAGTAGGTAAATGCAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 90 bp AGCTCTACAGTTCCATTTACAGGAGGGGATTTGCTGCTACTAGCATaGGACGCCTGGTCCAGAAGATTTCGGATCAGTGAGTTAGGGGAC +
Preference number: 1 (lower is better)
Translates to: SSTVPFTGGDLLLLA*DAWSRRFRISELGD
Trigger: GTCCCCTAACTCACTGATCCGAAATCTTCTGGACCAGGCGTCCCATGCTAGTAGCAGCAAATCCCCTCCTGTAAATGGAACTGTAGAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 90 bp ACATCCTTCATCATTTTGCTCACTATGACAATCTTGGGCCCCAGCTaGTTGTTCACCGTGAAGATGTGCAGCAGGCGCAGTGTGAAGATC +
Preference number: 1 (lower is better)
Translates to: TSFIILLTMTILGPS*LFTVKMCSRRSVKI
Trigger: GATCTTCACACTGCGCCTGCTGCACATCTTCACGGTGAACAAGCAGCTGGGGCCCAAGATTGTCATAGTGAGCAAAATGATGAAGGATGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 90 bp GTTATGGGTTATTTAGTTAAATTGCAATGTATAATGATGTGGATTTaGCTCCACCCCCGTGTGAGTGTGGCCTGCAATTTTCCACTAATT +
Preference number: 1 (lower is better)
Translates to: VMGYLVKLQCIMMWI*LHPRVSVACNFPLI
Trigger: AATTAGTGGAAAATTGCAGGCCACACTCACACGGGGGTGGAGGCAAATCCACATCATTATACATTGCAATTTAACTAAATAACCCATAAC
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CAA 90 bp CCCAGGAAGGCAGTCACTGGGGCACCCCAGAAGTCCGACCAGCGCTaGGAGAACTTGCCACAGCAGAGGGCACGTCCTGGCCGTCGCCGC +
Preference number: 2 (lower is better)
Translates to: PRKAVTGAPQKSDQR*ENLPQQRARPGRRR
Trigger: GCGGCGACGGCCAGGACGTGCCCTCTGCTGTGGCAAGTTCTCCAAGCGCTGGTCGGACTTCTGGGGTGCCCCAGTGACTGCCTTCCTGGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR GCA 90 bp TCAGGGTCACCACGCCACCGGTACCTTGCGGGGAATGAGCCCTTGGGGTTGATCCGGCCAATGCCTGTGTaGAGTCCCCCAGTGACGATC +
Preference number: 2 (lower is better)
Translates to: SGSPRHRYLAGNEPLGLIRPMPV*SPPVTI
Trigger: GATCGTCACTGGGGGACTGCACACAGGCATTGGCCG...GATCAACCCCAAGGGCTCATTCCCCGCAAGGTACCGGTGGCGTGGTGACCCTGA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000210541.2
3UTR-3UTR CCA 90 bp TTGATCAGCATGTCTCTGTTCCGGACCACTCCCCAGGGGGCCACACCCATGGCCGTGCTGGCTGTCTGGTaGTCCCTTACAGCCACACCC +
Preference number: 2 (lower is better)
Translates to: LISMSLFRTTPQGATPMAVLAVW*SLTATP
Trigger: GGGTGTGGCTGTAAGGGACCACCAGACAGCCAGCAC...GGCCATGGGTGTGGCCCCCTGGGGAGTGGTCCGGAACAGAGACATGCTGATCAA
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000210541.2
3UTR CAA 90 bp TTGGCCACCAGCAAGAAGACGATAAGGAGCAACACCACCAGCCAGTaGGCATACTGGGACACACAGGAGCCTGCGACGGGCCCCTCCGGA +
Preference number: 2 (lower is better)
Translates to: LATSKKTIRSNTTSQ*AYWDTQEPATGPSG
Trigger: TCCGGAGGGGCCCGTCGCAGGCTCCTGTGTGTCCCAGTATGCCAACTGGCTGGTGGTGTTGCTCCTTATCGTCTTCTTGCTGGTGGCCAA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR GCA 90 bp TGGACCTCTCTCTCCAGCCCCCTCAGACGCCGATCGTACTCTCTGATCTGTCCCGGATACTCGGTAGACTaGGGTCCTGGGGCCTCAGGA +
Preference number: 2 (lower is better)
Translates to: WTSLSSPLRRRSYSLICPGYSVD*GPGASG
Trigger: TCCTGAGGCCCCAGGACCGCAGTCTACCGAGTATCC...GGGACAGATCAGAGAGTACGATCGGCGTCTGAGGGGGCTGGAGAGAGAGGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR CCA 90 bp TGGACCTCTCTCTCCAGCCCCCTCAGACGCCGATCGTACTCTCTGATCTGTCCCGCACTTGCCCCACATTaGGAGGCCGGAGCTCTACAG +
Preference number: 2 (lower is better)
Translates to: WTSLSSPLRRRSYSLICPALAPH*EAGALQ
Trigger: CTGTAGAGCTCCGGCCTCCCAATGTGGGGCAAGTGC...GGGACAGATCAGAGAGTACGATCGGCGTCTGAGGGGGCTGGAGAGAGAGGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR CCA 90 bp GGAATCATGAGGGCCACGTCCATTTCCTCCTGGGGAATTTGTCCGAAGATCTGCCCACCACCCAGGCCCTaGCGCAGCTCCTCGCACAGC +
Preference number: 2 (lower is better)
Translates to: GIMRATSISSWGICPKICPPPRP*RSSSHS
Trigger: GCTGTGCGAGGAGCTGCGCCAGGGCCTGGGTGGTGG...GCAGATCTTCGGACAAATTCCCCAGGAGGAAATGGACGTGGCCCTCATGATTCC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR TCA 90 bp AAGCGGCAGGGGCTCAGACGCCCCTGTCTCCTGCAGGGAAAGCCACCCAAACAGGCCCAGCTTGAGGAATaGACCCTCTCTGGATGCAAA +
Preference number: 2 (lower is better)
Translates to: KRQGLRRPCLLQGKPPKQAQLEE*TLSGCK
Trigger: TTTGCATCCAGAGAGGGTTCATTCCTCAAGCTGGGC...CTGTTTGGGTGGCTTTCCCTGCAGGAGACAGGGGCGTCTGAGCCCCTGCCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
3UTR-3UTR GCA 90 bp CGGTCTTCTGCTGAGCCACATAGGACTCAAACCGAAGGCGGAAGCGGTTCTCACCCCTCCTGCTTCCTCTaGTGTGTGGCTGGGCCCACA +
Preference number: 2 (lower is better)
Translates to: RSSAEPHRTQTEGGSGSHPSCFL*CVAGPT
Trigger: TGTGGGCCCAGCCACACAGCAGAGGAAGCAGGAGGG...GTGAGAACCGCTTCCGCCTTCGGTTTGAGTCCTATGTGGCTCAGCAGAAGACCG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR GCA 90 bp AGTTATAGTCCAGGGGGAACTCAACACCATCCTCAGGGTCACCACGCCACCGGTACAGCCACACCCACGTaGCGGCCAATGCCTGTGTGC +
Preference number: 2 (lower is better)
Translates to: SYSPGGTQHHPQGHHATGTATPT*RPMPVC
Trigger: GCACACAGGCATTGGCCGGCACGTGGGTGTGGCTGT...ACCGGTGGCGTGGTGACCCTGAGGATGGTGTTGAGTTCCCCCTGGACTATAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210541.2
3UTR-3UTR GCA 90 bp AGTTATAGTCCAGGGGGAACTCAACACCATCCTCAGGGTCACCACGCCACCGGTCCTTGCTGCTCCCAGTaGTGGCTGTCTGGTGGTCCC +
Preference number: 2 (lower is better)
Translates to: SYSPGGTQHHPQGHHATGPCCSQ*WLSGGP
Trigger: GGGACCACCAGACAGCCAGCACTGGGAGCAGCAAGG...ACCGGTGGCGTGGTGACCCTGAGGATGGTGTTGAGTTCCCCCTGGACTATAACT
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210541.2
3UTR-3UTR CCA 90 bp CAAACCGAAGGCGGAAGCGGTTCTCACCACCCAGGCGGCCATAGGTGCCATCATCCAGTGCTGGCTGTCTaGTGGTCCCTTACAGCCACA +
Preference number: 2 (lower is better)
Translates to: QTEGGSGSHHPGGHRCHHPVLAV*WSLTAT
Trigger: TGTGGCTGTAAGGGACCACCAGACAGCCAGCACTGG...ATGATGGCACCTATGGCCGCCTGGGTGGTGAGAACCGCTTCCGCCTTCGGTTTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210541.2
3UTR CAA 90 bp GTGGCTAAGGGCCTCAGCCATCCAAGTCAGGACTCGAGAACAGTGTaGGACCTCTCTCTCCAGCCCCCTCAGACGCCGATCGTACTCTCT +
Preference number: 2 (lower is better)
Translates to: VAKGLSHPSQDSRTV*DLSLQPPQTPIVLS
Trigger: AGAGAGTACGATCGGCGTCTGAGGGGGCTGGAGAGAGAGGTCCAACACTGTTCTCGAGTCCTGACTTGGATGGCTGAGGCCCTTAGCCAC
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR TCA 90 bp TGGACCTCTCTCTCCAGCCCCCTCAGACGCCGATCGTACTCTCTGATCTGTCCCTTGATTCACCCAAGGTaGGGCTGCTCTGGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: WTSLSSPLRRRSYSLICPLIHPR*GCSGKE
Trigger: CTCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAA...GGGACAGATCAGAGAGTACGATCGGCGTCTGAGGGGGCTGGAGAGAGAGGTCCA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR GCA 90 bp GGGAAGGACAGATTCCCAACATCACACACCTGCTCCACAGGAGCCAAGCATGTGCCCTCCTGCTTCCTCTaGTGTGTGGCTGGGCCCACA +
Preference number: 2 (lower is better)
Translates to: GKDRFPTSHTCSTGAKHVPSCFL*CVAGPT
Trigger: TGTGGGCCCAGCCACACAGCAGAGGAAGCAGGAGGG...CACATGCTTGGCTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGTCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
3UTR-3UTR GCA 90 bp TTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCAGACGACCCCAGGACCCTCCTaGTTCCTCTGCTGTGTGGCT +
Preference number: 2 (lower is better)
Translates to: LPPCYVPTGKQKAAGAQTTPGPS*FLCCVA
Trigger: AGCCACACAGCAGAGGAAGCAGGAGGGTCCTGGGGT...CGTCTGAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
3UTR-3UTR CCA 90 bp TTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCAGACGGCTTCCTCTGCTGTGTaGCTGGGCCCACAAAGAGGC +
Preference number: 2 (lower is better)
Translates to: LPPCYVPTGKQKAAGAQTASSAV*LGPQRG
Trigger: GCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGC...CGTCTGAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
3UTR-3UTR CCA 90 bp CTGGTTGTACGTCTGGCCGTGTTCCAACATGGCTCTACACCCAGAGAGGCCCCGACACCACCAGCCAGTTaGCATACTGGGACACACAGG +
Preference number: 2 (lower is better)
Translates to: LVVRLAVFQHGSTPREAPTPPAS*HTGTHR
Trigger: CCTGTGTGTCCCAGTATGCCAACTGGCTGGTGGTGT...CGGGGCCTCTCTGGGTGTAGAGCCATGTTGGAACACGGCCAGACGTACAACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR CCA 90 bp CTGGTTGTACGTCTGGCCGTGTTCCAACATGGCTCTACACCCAGAGAGGCCCCGGCGCCCACCCTCCTCTaGGACCAGCTCTCTTTATTA +
Preference number: 2 (lower is better)
Translates to: LVVRLAVFQHGSTPREAPAPTLL*DQLSLL
Trigger: TAATAAAGAGAGCTGGTCCCAGAGGAGGGTGGGCGC...CGGGGCCTCTCTGGGTGTAGAGCCATGTTGGAACACGGCCAGACGTACAACCAG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR CCA 90 bp TGGGGAAGGACAGATTCCCAACATCACACACCTGCTCCACAGGAGCCAAGCATGCCTCTGCTGTGTGGCTaGGCCCACAAAGAGGCCAAC +
Preference number: 2 (lower is better)
Translates to: WGRTDSQHHTPAPQEPSMPLLCG*AHKEAN
Trigger: GTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGG...CATGCTTGGCTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGTCCTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
3UTR-3UTR CCA 90 bp TGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACGCTTCCTCTGCTGTGTaGCTGGGCCCACAAAGAGGC +
Preference number: 2 (lower is better)
Translates to: CVAGPTKRPTLPAQSLIHASSAV*LGPQRG
Trigger: GCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGC...GTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR-3UTR CCA 90 bp ACTCAAACCGAAGGCGGAAGCGGTTCTCACCACCCAGGCGGCCATAGGTGCCATGGAGCTGAGCTTGGGTaGCATCCTCTATCCGCTTTA +
Preference number: 2 (lower is better)
Translates to: TQTEGGSGSHHPGGHRCHGAELG*HPLSAL
Trigger: TAAAGCGGATAGAGGATGCCACCCAAGCTCAGCTCC...ATGGCACCTATGGCCGCCTGGGTGGTGAGAACCGCTTCCGCCTTCGGTTTGAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CAA 90 bp AGGGTACCGTGGTGCACACGTTTCTCCCAACAGAGTCCTCAGCACTaGCCCCACATTGGGAGGCCGGAGCTCTACAGTTCCATTTACAGG +
Preference number: 2 (lower is better)
Translates to: RVPWCTRFSQQSPQH*PHIGRPELYSSIYR
Trigger: CCTGTAAATGGAACTGTAGAGCTCCGGCCTCCCAATGTGGGGCAAGTGCTGAGGACTCTGTTGGGAGAAACGTGTGCACCACGGTACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR GCA 90 bp CTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCACCCCAGGACCCTCCTaGTTCCTCTGCTGTGTGGCT +
Preference number: 2 (lower is better)
Translates to: LYYHPVMFPRESRKRQGLTPGPS*FLCCVA
Trigger: AGCCACACAGCAGAGGAAGCAGGAGGGTCCTGGGGT...GAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
3UTR-3UTR CCA 90 bp TGCCAACAGGAAGTTCTCTTTGTGCACAGACTCCCAAGTCAGCAGCTTCCGCTCCAGGAAGGCAGTCACTaGGGCACCCCAGAAGTCCGA +
Preference number: 2 (lower is better)
Translates to: CQQEVLFVHRLPSQQLPLQEGSH*GTPEVR
Trigger: TCGGACTTCTGGGGTGCCCCAGTGACTGCCTTCCTG...GAGCGGAAGCTGCTGACTTGGGAGTCTGTGCACAAAGAGAACTTCCTGTTGGCA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR TCA 90 bp TGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACTTGATTCACCCAAGGTaGGGCTGCTCTGGGAAGGAG +
Preference number: 2 (lower is better)
Translates to: CVAGPTKRPTLPAQSLIHLIHPR*GCSGKE
Trigger: CTCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAA...GTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR-3UTR CCA 90 bp AGCCATCTGGGCCCGGTTCAGCAACAGAGCCCAAATAAGCAGGTCACTCCAGGGGAGAAGAAGGAGCACTaGGATGTCAATTCCAGTCCC +
Preference number: 2 (lower is better)
Translates to: SHLGPVQQQSPNKQVTPGEKKEH*DVNSSP
Trigger: GGGACTGGAATTGACATCCCAGTGCTCCTTCTTCTC...CCCTGGAGTGACCTGCTTATTTGGGCTCTGTTGCTGAACCGGGCCCAGATGGCT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR CCA 90 bp CTGCTGTCCATATCAAAGTCAAGATCCTTCTGTGTGGGCTCCTCCTCTGACTTCGGGCATCAGCCTGCATaGCAAGCTGGAGGCAGGTGG +
Preference number: 2 (lower is better)
Translates to: LLSISKSRSFCVGSSSDFGHQPA*QAGGRW
Trigger: CCACCTGCCTCCAGCTTGCCATGCAGGCTGATGCCC...GAAGTCAGAGGAGGAGCCCACACAGAAGGATCTTGACTTTGATATGGACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR TCA 90 bp TGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACGCCCAGCTTGAGGAATaGACCCTCTCTGGATGCAAA +
Preference number: 2 (lower is better)
Translates to: CVAGPTKRPTLPAQSLIHAQLEE*TLSGCK
Trigger: TTTGCATCCAGAGAGGGTTCATTCCTCAAGCTGGGC...GTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR-3UTR TCA 90 bp GCCATCACTCGGAGTAAAAGACAAGCCCCAAGAGCAGAGGCCACTGAGTTGGAGGCCCAGCTTGAGGAATaGACCCTCTCTGGATGCAAA +
Preference number: 2 (lower is better)
Translates to: AITRSKRQAPRAEATELEAQLEE*TLSGCK
Trigger: TTTGCATCCAGAGAGGGTTCATTCCTCAAGCTGGGC...CTCCAACTCAGTGGCCTCTGCTCTTGGGGCTTGTCTTTTACTCCGAGTGATGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR TCA 90 bp CTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCAGCCCAGCTTGAGGAATaGACCCTCTCTGGATGCAAA +
Preference number: 2 (lower is better)
Translates to: LCGWAHKEANFASSELDSAQLEE*TLSGCK
Trigger: TTTGCATCCAGAGAGGGTTCATTCCTCAAGCTGGGC...TGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR-3UTR TCA 90 bp ACCAGCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGAAGAGGCAGGGGAGCTaGGCTTGGGTGGCATCCTCT +
Preference number: 2 (lower is better)
Translates to: TSSLYYHPVMFPRESRKRKRQGS*AWVASS
Trigger: AGAGGATGCCACCCAAGCTCAGCTCCCCTGCCTCTT...CCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGCTGGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR GCA 90 bp AGGAGGGGATTTGCTGCTACTAGCATGGGACGCCTGGTCCAGAAGATTTCGGATAGCATCCATGAGAGATaGCTCCAGGTGGAAGGACCG +
Preference number: 2 (lower is better)
Translates to: RRGFAATSMGRLVQKISDSIHER*LQVEGP
Trigger: CGGTCCTTCCACCTGGAGGCATCTCTCATGGATGCT...ATCCGAAATCTTCTGGACCAGGCGTCCCATGCTAGTAGCAGCAAATCCCCTCCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CAA 90 bp ACATTGGGAGGCCGGAGCTCTACAGTTCCATTTACAGGAGGGGATTaGCTGCTACTAGCATGGGACGCCTGGTCCAGAAGATTTCGGATC +
Preference number: 2 (lower is better)
Translates to: TLGGRSSTVPFTGGD*LLLAWDAWSRRFRI
Trigger: GATCCGAAATCTTCTGGACCAGGCGTCCCATGCTAGTAGCAGCAAATCCCCTCCTGTAAATGGAACTGTAGAGCTCCGGCCTCCCAATGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CAA 90 bp TCACTGTCTCGCTTGTCCCGAGCTTGTGCCAACAGGAAGTTCTCTTaGTGCACAGACTCCCAAGTCAGCAGCTTCCGCTCTGCTTCCTTA +
Preference number: 2 (lower is better)
Translates to: SLSRLSRACANRKFS*CTDSQVSSFRSASL
Trigger: TAAGGAAGCAGAGCGGAAGCTGCTGACTTGGGAGTCTGTGCACAAAGAGAACTTCCTGTTGGCACAAGCTCGGGACAAGCGAGACAGTGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR TCA 90 bp CACACACCTGCTCCACAGGAGCCAAGCATGTGCGAAAATCCTCATCAAATGGTTAGACTGGGCCCAGCTTaGGGAATGAACCCTCTCTGG +
Preference number: 2 (lower is better)
Translates to: HTPAPQEPSMCENPHQMVRLGPA*GMNPLW
Trigger: CCAGAGAGGGTTCATTCCTCAAGCTGGGCCCAGTCT...AACCATTTGATGAGGATTTTCGCACATGCTTGGCTCCTGTGGAGCAGGTGTGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
3UTR-3UTR TCA 90 bp CGGATTTATGAACCAGACAACACAAGGCCAGCCACACAGAAGGCAACATGTGTCCCAGCAGGAAGCAGGTaGGTGCCAGCAGGTCACATT +
Preference number: 2 (lower is better)
Translates to: RIYEPDNTRPATQKATCVPAGSR*VPAGHI
Trigger: AATGTGACCTGCTGGCACTCACCTGCTTCCTGCTGG...GACACATGTTGCCTTCTGTGTGGCTGGCCTTGTGTTGTCTGGTTCATAAATCCG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR GCA 90 bp GCCAACAGGAAGTTCTCTTTGTGCACAGACTCCCAAGTCAGCAGCTTCCGCTCTTTCACCGTGAAGATGTaGAGCAGGCGCAGTGTGAAG +
Preference number: 2 (lower is better)
Translates to: ANRKFSLCTDSQVSSFRSFTVKM*SRRSVK
Trigger: CTTCACACTGCGCCTGCTGCACATCTTCACGGTGAA...AGAGCGGAAGCTGCTGACTTGGGAGTCTGTGCACAAAGAGAACTTCCTGTTGGC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR CCA 90 bp GGAATCATGAGGGCCACGTCCATTTCCTCCTGGGGAATTTGTCCGAAGATCTGCCAGAGGCCACTGAGTTaGAGCCCTTCTCCCAGAAAT +
Preference number: 2 (lower is better)
Translates to: GIMRATSISSWGICPKICQRPLS*SPSPRN
Trigger: ATTTCTGGGAGAAGGGCTCCAACTCAGTGGCCTCTG...GCAGATCTTCGGACAAATTCCCCAGGAGGAAATGGACGTGGCCCTCATGATTCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR GCA 90 bp TTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCAGACGCAGGAGCCAAGCATGTaGGAAAATCCTCATCAAATG +
Preference number: 2 (lower is better)
Translates to: LPPCYVPTGKQKAAGAQTQEPSM*ENPHQM
Trigger: CATTTGATGAGGATTTTCGCACATGCTTGGCTCCTG...CGTCTGAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
3UTR-3UTR CCA 90 bp TGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCGGAATGAACCCTCTCTaGATGCAAACACCTAGACAT +
Preference number: 2 (lower is better)
Translates to: CGWAHKEANFASSELDSPGMNPL*MQTPRH
Trigger: ATGTCTAGGTGTTTGCATCCAGAGAGGGTTCATTCC...GGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR-3UTR CCA 90 bp CCAGCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCGCAGCTGCAATGGTCTaGGGAAGGACAGATTCCCAA +
Preference number: 2 (lower is better)
Translates to: PALFITTLLCSHGKAESGAAAMV*GRTDSQ
Trigger: TTGGGAATCTGTCCTTCCCCAGACCATTGCAGCTGC...GCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGCTGG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
3UTR-3UTR CCA 90 bp TGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACGGAATGAACCCTCTCTaGATGCAAACACCTAGACAT +
Preference number: 2 (lower is better)
Translates to: CVAGPTKRPTLPAQSLIHGMNPL*MQTPRH
Trigger: ATGTCTAGGTGTTTGCATCCAGAGAGGGTTCATTCC...GTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR-3UTR CCA 90 bp ATTTATGAACCAGACAACACAAGGCCAGCCACACAGAAGGCAACATGTGTCAGTGAGAGGCCCCGGAGCTaGAATCCCTCCAATTTGGAG +
Preference number: 2 (lower is better)
Translates to: IYEPDNTRPATQKATCVSERPRS*NPSNLE
Trigger: CTCCAAATTGGAGGGATTCCAGCTCCGGGGCCTCTC...ACTGACACATGTTGCCTTCTGTGTGGCTGGCCTTGTGTTGTCTGGTTCATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CAA 90 bp TCCTTCATCATTTTGCTCACTATGACAATCTTGGGCCCCAGCTGCTaGTTCACCGTGAAGATGTGCAGCAGGCGCAGTGTGAAGATCATG +
Preference number: 2 (lower is better)
Translates to: SFIILLTMTILGPSC*FTVKMCSRRSVKIM
Trigger: CATGATCTTCACACTGCGCCTGCTGCACATCTTCACGGTGAACAAGCAGCTGGGGCCCAAGATTGTCATAGTGAGCAAAATGATGAAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CAA 90 bp CACATATGCATTTACCTACTCAAATCTGCATCATCTGTTTGTATGTaGCCTGAGCAGATGACAGCAGCGCCCACCCTCCTCTGGGACCAG +
Preference number: 2 (lower is better)
Translates to: HICIYLLKSASSVCM*PEQMTAAPTLLWDQ
Trigger: CTGGTCCCAGAGGAGGGTGGGCGCTGCTGTCATCTGCTCAGGCAACATACAAACAGATGATGCAGATTTGAGTAGGTAAATGCATATGTG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR CCA 90 bp CTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCGGAATGAACCCTCTCTaGATGCAAACACCTAGACAT +
Preference number: 2 (lower is better)
Translates to: LYYHPVMFPRESRKRQGLGMNPL*MQTPRH
Trigger: ATGTCTAGGTGTTTGCATCCAGAGAGGGTTCATTCC...GAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
3UTR CAA 90 bp AGGAAGAAGAATACATCCTTCATCATTTTGCTCACTATGACAATCTaGGGCCCCAGCTGCTTGTTCACCGTGAAGATGTGCAGCAGGCGC +
Preference number: 2 (lower is better)
Translates to: RKKNTSFIILLTMTI*GPSCLFTVKMCSRR
Trigger: GCGCCTGCTGCACATCTTCACGGTGAACAAGCAGCTGGGGCCCAAGATTGTCATAGTGAGCAAAATGATGAAGGATGTATTCTTCTTCCT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR TCA 90 bp CAATGTATAATGATGTGGATTTGCCTCCACCCCCGTGTGAGTGTGGCCTGCAATTCATTTTGCTCACTATaGCAATCTTGGGCCCCAGCT +
Preference number: 2 (lower is better)
Translates to: QCIMMWICLHPRVSVACNSFCSL*QSWAPA
Trigger: AGCTGGGGCCCAAGATTGTCATAGTGAGCAAAATGA...ATTGCAGGCCACACTCACACGGGGGTGGAGGCAAATCCACATCATTATACATTG
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR GCA 90 bp ATTTATGAACCAGACAACACAAGGCCAGCCACACAGAAGGCAACATGTGTCAGTCAGGAAGCAGGTGAGTaGCAGCAGGTCACATTGGTT +
Preference number: 2 (lower is better)
Translates to: IYEPDNTRPATQKATCVSQEAGE*QQVTLV
Trigger: AACCAATGTGACCTGCTGGCACTCACCTGCTTCCTG...ACTGACACATGTTGCCTTCTGTGTGGCTGGCCTTGTGTTGTCTGGTTCATAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR CCA 90 bp ACAGATTCCCAACATCACACACCTGCTCCACAGGAGCCAAGCATGTGCGAAAATGGAATGAACCCTCTCTaGATGCAAACACCTAGACAT +
Preference number: 2 (lower is better)
Translates to: TDSQHHTPAPQEPSMCENGMNPL*MQTPRH
Trigger: ATGTCTAGGTGTTTGCATCCAGAGAGGGTTCATTCC...ATTTTCGCACATGCTTGGCTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
3UTR GCA 72 bp GGGCACCCCAGAAGTCCGACCAGCGCTTGGAGAACTTaGCACAGCAGAGGGCACGTCCTGGCCGTCGCCGCT +
Preference number: 3 (lower is better)
Translates to: GHPRSPTSAWRT*HSRGHVLAVAA
Trigger: AGCGGCGACGGCCAGGACGTGCCCTCTGCTGTGGCAAGTTCTCCAAGCGCTGGTCGGACTTCTGGGGTGCCC
68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 72 bp GCGCTTGGAGAACTTGCCACAGCAGAGGGCACGTCCTaGCCGTCGCCGCTGCCGCCTCTCAAGGGCCACCTT +
Preference number: 3 (lower is better)
Translates to: ALGELATAEGTS*PSPLPPLKGHL
Trigger: AAGGTGGCCCTTGAGAGGCGGCAGCGGCGACGGCCAGGACGTGCCCTCTGCTGTGGCAAGTTCTCCAAGCGC
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR TCA 72 bp TGGGACACACAGGAGCCTGCGACGGGCCCCTCCGGATaGGCCCAGGAGCCCCGCTCCATTGAGCAGTTACCT +
Preference number: 3 (lower is better)
Translates to: WDTQEPATGPSG*AQEPRSIEQLP
Trigger: AGGTAACTGCTCAATGGAGCGGGGCTCCTGGGCTCATCCGGAGGGGCCCGTCGCAGGCTCCTGTGTGTCCCA
67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 72 bp TGGCCGTCGCCGCTGCCGCCTCTCAAGGGCCACCTTTaGAGAGGGTTCTACAGTCCCAGGAGGACCTGCTCC +
Preference number: 3 (lower is better)
Translates to: WPSPLPPLKGHL*RGFYSPRRTCS
Trigger: GGAGCAGGTCCTCCTGGGACTGTAGAACCCTCTGCAAAGGTGGCCCTTGAGAGGCGGCAGCGGCGACGGCCA
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 72 bp CTGGCTGTCTGGTGGTCCCTTACAGCCACACCCACGTaGCGGCCAATGCCTGTGTGCAGTCCCCCAGTGACG +
Preference number: 3 (lower is better)
Translates to: LAVWWSLTATPT*RPMPVCSPPVT
Trigger: CGTCACTGGGGGACTGCACACAGGCATTGGCCGGCACGTGGGTGTGGCTGTAAGGGACCACCAGACAGCCAG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000210541.2
3UTR CCA 72 bp CGGATCAGTGAGTTAGGGGACACCGCGCTGTACAGCTaGGCCAGACGCACGGGGGTCAGGAAGTGTCCCAGG +
Preference number: 3 (lower is better)
Translates to: RISELGDTALYS*ARRTGVRKCPR
Trigger: CCTGGGACACTTCCTGACCCCCGTGCGTCTGGCCCAGCTGTACAGCGCGGTGTCCCCTAACTCACTGATCCG
65% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 72 bp CAGTCACTGGGGCACCCCAGAAGTCCGACCAGCGCTTaGAGAACTTGCCACAGCAGAGGGCACGTCCTGGCC +
Preference number: 3 (lower is better)
Translates to: QSLGHPRSPTSA*RTCHSRGHVLA
Trigger: GGCCAGGACGTGCCCTCTGCTGTGGCAAGTTCTCCAAGCGCTGGTCGGACTTCTGGGGTGCCCCAGTGACTG
65% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 72 bp ATGGCCACCACCTTGCTGCTCCCAGTGCTGGCTGTCTaGTGGTCCCTTACAGCCACACCCACGTGCCGGCCA +
Preference number: 3 (lower is better)
Translates to: MATTLLLPVLAV*WSLTATPTCRP
Trigger: TGGCCGGCACGTGGGTGTGGCTGTAAGGGACCACCAGACAGCCAGCACTGGGAGCAGCAAGGTGGTGGCCAT
65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210541.2
3UTR CCA 72 bp CACCCCAGGACCCTCCTGCTTCCTCTGCTGTGTGGCTaGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAG +
Preference number: 3 (lower is better)
Translates to: HPRTLLLPLLCG*AHKEANFASSE
Trigger: CTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGGAGGGTCCTGGGGTG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR CCA 72 bp ACGATAAGGAGCAACACCACCAGCCAGTTGGCATACTaGGACACACAGGAGCCTGCGACGGGCCCCTCCGGA +
Preference number: 3 (lower is better)
Translates to: TIRSNTTSQLAY*DTQEPATGPSG
Trigger: TCCGGAGGGGCCCGTCGCAGGCTCCTGTGTGTCCCAGTATGCCAACTGGCTGGTGGTGTTGCTCCTTATCGT
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 72 bp GCCTCAGCCATCCAAGTCAGGACTCGAGAACAGTGTTaGACCTCTCTCTCCAGCCCCCTCAGACGCCGATCG +
Preference number: 3 (lower is better)
Translates to: ASAIQVRTREQC*TSLSSPLRRRS
Trigger: CGATCGGCGTCTGAGGGGGCTGGAGAGAGAGGTCCAACACTGTTCTCGAGTCCTGACTTGGATGGCTGAGGC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR TCA 72 bp AGCATGGGACGCCTGGTCCAGAAGATTTCGGATCAGTaGGTTAGGGGACACCGCGCTGTACAGCTGGGCCAG +
Preference number: 3 (lower is better)
Translates to: SMGRLVQKISDQ*VRGHRAVQLGQ
Trigger: CTGGCCCAGCTGTACAGCGCGGTGTCCCCTAACTCACTGATCCGAAATCTTCTGGACCAGGCGTCCCATGCT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 72 bp CATTGTGGGGAAGCTGTGTGTAGGGTCTGTGGTTCCTaGACCCCAGGACCCTCCTGCTTCCTCTGCTGTGTG +
Preference number: 3 (lower is better)
Translates to: HCGEAVCRVCGS*TPGPSCFLCCV
Trigger: CACACAGCAGAGGAAGCAGGAGGGTCCTGGGGTGCAGGAACCACAGACCCTACACACAGCTTCCCCACAATG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR GCA 72 bp TCCCCAGAGGGGACAGCGGCGCAGAAGAAGGCGGGCTaGTCGCTCTTCACTGTTGTGGTAACACTCTCCAAA +
Preference number: 3 (lower is better)
Translates to: SPEGTAAQKKAG*SLFTVVVTLSK
Trigger: TTTGGAGAGTGTTACCACAACAGTGAAGAGCGAGCAGCCCGCCTTCTTCTGCGCCGCTGTCCCCTCTGGGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 72 bp GGAGAGTCTGGTTGTACGTCTGGCCGTGTTCCAACATaGCTCTACACCCAGAGAGGCCCCGGAGCTGGAATC +
Preference number: 3 (lower is better)
Translates to: GESGCTSGRVPT*LYTQRGPGAGI
Trigger: GATTCCAGCTCCGGGGCCTCTCTGGGTGTAGAGCCATGTTGGAACACGGCCAGACGTACAACCAGACTCTCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR CAA 90 bp CCCAGGAAGGCAGTCACTGGGGCACCCCAGAAGTCCGACCAGCGCTTGGAGAACACAAAGAGGCCAACTTaGCCAGCTCAGAGCTTGATT +
Preference number: 3 (lower is better)
Translates to: PRKAVTGAPQKSDQRLENTKRPT*PAQSLI
Trigger: AATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGT...GTTCTCCAAGCGCTGGTCGGACTTCTGGGGTGCCCCAGTGACTGCCTTCCTGGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 72 bp TTCAGGCCGGTCATTCAGCAGAGCATCCATGAGAGATaGCTCCAGGTGGAAGGACCGCCATTGGATGTCCCC +
Preference number: 3 (lower is better)
Translates to: FRPVIQQSIHER*LQVEGPPLDVP
Trigger: GGGGACATCCAATGGCGGTCCTTCCACCTGGAGGCATCTCTCATGGATGCTCTGCTGAATGACCGGCCTGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 72 bp CAGGTAACTGACCACATTACCCAGGAAGGCAGTCACTaGGGCACCCCAGAAGTCCGACCAGCGCTTGGAGAA +
Preference number: 3 (lower is better)
Translates to: QVTDHITQEGSH*GTPEVRPALGE
Trigger: TTCTCCAAGCGCTGGTCGGACTTCTGGGGTGCCCCAGTGACTGCCTTCCTGGGTAATGTGGTCAGTTACCTG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR TCA 72 bp GGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTaGTTCACCCAAGGTGAGGCTGCTCTGGGAAGGAGT +
Preference number: 3 (lower is better)
Translates to: GPQRGQLCQLRA*FTQGEAALGRS
Trigger: ACTCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR CCA 72 bp CACCACTTCTGTGTCAGAAGAGACTGGACTCCATCCTaGGCAAAGAACGCTCGGGCATCAGCCTGCATGGCA +
Preference number: 3 (lower is better)
Translates to: HHFCVRRDWTPS*AKNARASACMA
Trigger: TGCCATGCAGGCTGATGCCCGAGCGTTCTTTGCCCAGGATGGAGTCCAGTCTCTTCTGACACAGAAGTGGTG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 72 bp GAAGGCCCAGAAGTACAGCAGCAGCTCGGAGACACTTaGCTTTGTGGGCTGGAAATCCACCAGCAACACGTG +
Preference number: 3 (lower is better)
Translates to: EGPEVQQQLGDT*LCGLEIHQQHV
Trigger: CACGTGTTGCTGGTGGATTTCCAGCCCACAAAGCCAAGTGTCTCCGAGCTGCTGCTGTACTTCTGGGCCTTC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 72 bp GCCCCTTCTTACTGCCACCATGGTGACCGTTTGGGTTaGCAGAATGGACCCAGGATTTCCAGGGAGAGTCTG +
Preference number: 3 (lower is better)
Translates to: APSYCHHGDRLG*QNGPRISRESL
Trigger: CAGACTCTCCCTGGAAATCCTGGGTCCATTCTGCCAACCCAAACGGTCACCATGGTGGCAGTAAGAAGGGGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR TCA 72 bp GTGTCGCTTGAGGCAGACTGGGCCCAGCTTGAGGAATaGACCCTCTCTGGATGCAAACACCTAGACATCCAC +
Preference number: 3 (lower is better)
Translates to: VSLEADWAQLEE*TLSGCKHLDIH
Trigger: GTGGATGTCTAGGTGTTTGCATCCAGAGAGGGTTCATTCCTCAAGCTGGGCCCAGTCTGCCTCAAGCGACAC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 5 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000210311.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR TCA 72 bp CCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTaGGGCTGCTCTGGGAAGGAGTCCCTCGGTGATACT +
Preference number: 3 (lower is better)
Translates to: PTLPAQSLIHPR*GCSGKESLGDT
Trigger: AGTATCACCGAGGGACTCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR CCA 72 bp TCCATGAGAGATGCCTCCAGGTGGAAGGACCGCCATTaGATGTCCCCACGGAAAAGTTCACTTTGGGCGATG +
Preference number: 3 (lower is better)
Translates to: SMRDASRWKDRH*MSPRKSSLWAM
Trigger: CATCGCCCAAAGTGAACTTTTCCGTGGGGACATCCAATGGCGGTCCTTCCACCTGGAGGCATCTCTCATGGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR TCA 72 bp CACAAGGCCAGCCACACAGAAGGCAACATGTGTCAGTaGGTGCTAGCACTAGCCCCTTCTTACTGCCACCAT +
Preference number: 3 (lower is better)
Translates to: HKASHTEGNMCQ*VLALAPSYCHH
Trigger: ATGGTGGCAGTAAGAAGGGGCTAGTGCTAGCACTCACTGACACATGTTGCCTTCTGTGTGGCTGGCCTTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 72 bp GGCGGAAGCGGTTCTCACCACCCAGGCGGCCATAGGTaGCATCATCCACCAAGAAGAAAGCAGAATAGTTAT +
Preference number: 3 (lower is better)
Translates to: GGSGSHHPGGHR*HHPPRRKQNSY
Trigger: ATAACTATTCTGCTTTCTTCTTGGTGGATGATGGCACCTATGGCCGCCTGGGTGGTGAGAACCGCTTCCGCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000210541.2
ENSMUST00000211431.2
3UTR GCA 72 bp TGTTGTGGTAACACTCTCCAAAGAGGTCCACGCTCATaGTTTCAAACGTGGCAGCAAGATCCTTCCGCCGCG +
Preference number: 3 (lower is better)
Translates to: CCGNTLQRGPRS*FQTWQQDPSAA
Trigger: CGCGGCGGAAGGATCTTGCTGCCACGTTTGAAAGCATGAGCGTGGACCTCTTTGGAGAGTGTTACCACAACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 72 bp AGAAGTACAGCAGCAGCTCGGAGACACTTGGCTTTGTaGGCTGGAAATCCACCAGCAACACGTGGGCAAACA +
Preference number: 3 (lower is better)
Translates to: RSTAAARRHLAL*AGNPPATRGQT
Trigger: TGTTTGCCCACGTGTTGCTGGTGGATTTCCAGCCCACAAAGCCAAGTGTCTCCGAGCTGCTGCTGTACTTCT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 72 bp TTGCCTGAGCAGATGACAGCAGCGCCCACCCTCCTCTaGGACCAGCTCTCTTTATTACCACCCTGTTATGTT +
Preference number: 3 (lower is better)
Translates to: LPEQMTAAPTLL*DQLSLLPPCYV
Trigger: AACATAACAGGGTGGTAATAAAGAGAGCTGGTCCCAGAGGAGGGTGGGCGCTGCTGTCATCTGCTCAGGCAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 72 bp GTTGGCAGAATGGACCCAGGATTTCCAGGGAGAGTCTaGTTGTACGTCTGGCCGTGTTCCAACATGGCTCTA +
Preference number: 3 (lower is better)
Translates to: VGRMDPGFPGRV*LYVWPCSNMAL
Trigger: TAGAGCCATGTTGGAACACGGCCAGACGTACAACCAGACTCTCCCTGGAAATCCTGGGTCCATTCTGCCAAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR CAA 90 bp TTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCAGACGACAAAGAGGCCAACTTaGCCAGCTCAGAGCTTGATT +
Preference number: 3 (lower is better)
Translates to: LPPCYVPTGKQKAAGAQTTKRPT*PAQSLI
Trigger: AATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGT...CGTCTGAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
3UTR-3UTR CAA 90 bp CTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATACAAAGAGGCCAACTTaGCCAGCTCAGAGCTTGATT +
Preference number: 3 (lower is better)
Translates to: LLCGWAHKEANFASSELDTKRPT*PAQSLI
Trigger: AATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGT...ATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR TCA 72 bp AACTCCTTTCGGGTCATGATCCTCTCTACCTGGGCCTaGAGAACCTCAGGGTCTCCTTTAGGGAAGTATCGC +
Preference number: 3 (lower is better)
Translates to: NSFRVMILSTWA*RTSGSPLGKYR
Trigger: GCGATACTTCCCTAAAGGAGACCCTGAGGTTCTTCAGGCCCAGGTAGAGAGGATCATGACCCGAAAGGAGTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR TCA 72 bp CTGATGAATAGACCGTCAGCAACTCCTTTCGGGTCATaGTCCTCTCTACCTGGGCCTGAAGAACCTCAGGGT +
Preference number: 3 (lower is better)
Translates to: LMNRPSATPFGS*SSLPGPEEPQG
Trigger: ACCCTGAGGTTCTTCAGGCCCAGGTAGAGAGGATCATGACCCGAAAGGAGTTGCTGACGGTCTATTCATCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR TCA 72 bp CCTACTCAAATCTGCATCATCTGTTTGTATGTTGCCTaGGCAGATGACAGCAGCGCCCACCCTCCTCTGGGA +
Preference number: 3 (lower is better)
Translates to: PTQICIICLYVA*ADDSSAHPPLG
Trigger: TCCCAGAGGAGGGTGGGCGCTGCTGTCATCTGCTCAGGCAACATACAAACAGATGATGCAGATTTGAGTAGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 72 bp TTACCTGGAATCATGAGGGCCACGTCCATTTCCTCCTaGGGAATTTGTCCGAAGATCTGCAGATACGGTCGG +
Preference number: 3 (lower is better)
Translates to: LPGIMRATSISS*GICPKICRYGR
Trigger: CCGACCGTATCTGCAGATCTTCGGACAAATTCCCCAGGAGGAAATGGACGTGGCCCTCATGATTCCAGGTAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR CAA 90 bp GCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAACAAAGAGGCCAACTTaGCCAGCTCAGAGCTTGATT +
Preference number: 3 (lower is better)
Translates to: ANFASSELDSPKVRLLWETKRPT*PAQSLI
Trigger: AATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGT...TTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211431.2
ENSMUST00000211743.2
3UTR-3UTR CAA 90 bp CAATGTATAATGATGTGGATTTGCCTCCACCCCCGTGTGAGTGTGGCCTGCAATCTCACTATGACAATCTaGGGCCCCAGCTGCTTGTTC +
Preference number: 3 (lower is better)
Translates to: QCIMMWICLHPRVSVACNLTMTI*GPSCLF
Trigger: GAACAAGCAGCTGGGGCCCAAGATTGTCATAGTGAG...ATTGCAGGCCACACTCACACGGGGGTGGAGGCAAATCCACATCATTATACATTG
51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 72 bp CACCTTTGCAGAGGGTTCTACAGTCCCAGGAGGACCTaGTCCATTGATGCTGCTGTCCATATCAAAGTCAAG +
Preference number: 3 (lower is better)
Translates to: HLCRGFYSPRRT*SIDAAVHIKVK
Trigger: CTTGACTTTGATATGGACAGCAGCATCAATGGAGCAGGTCCTCCTGGGACTGTAGAACCCTCTGCAAAGGTG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 72 bp ATCATTTTGCTCACTATGACAATCTTGGGCCCCAGCTaGTTGTTCACCGTGAAGATGTGCAGCAGGCGCAGT +
Preference number: 3 (lower is better)
Translates to: IILLTMTILGPS*LFTVKMCSRRS
Trigger: ACTGCGCCTGCTGCACATCTTCACGGTGAACAAGCAGCTGGGGCCCAAGATTGTCATAGTGAGCAAAATGAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 72 bp GTTCCATTTACAGGAGGGGATTTGCTGCTACTAGCATaGGACGCCTGGTCCAGAAGATTTCGGATCAGTGAG +
Preference number: 3 (lower is better)
Translates to: VPFTGGDLLLLA*DAWSRRFRISE
Trigger: CTCACTGATCCGAAATCTTCTGGACCAGGCGTCCCATGCTAGTAGCAGCAAATCCCCTCCTGTAAATGGAAC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR-3UTR CAA 90 bp ATTTTGCTCACTATGACAATCTTGGGCCCCAGCTGCTTGTTCACCGTGAAGATGACGGAAAAGTTCACTTaGGGCGATGTCCACGCGGTT +
Preference number: 3 (lower is better)
Translates to: ILLTMTILGPSCLFTVKMTEKFT*GDVHAV
Trigger: AACCGCGTGGACATCGCCCAAAGTGAACTTTTCCGT...CATCTTCACGGTGAACAAGCAGCTGGGGCCCAAGATTGTCATAGTGAGCAAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR TCA 72 bp ATCAAAGTCAAGATCCTTCTGTGTGGGCTCCTCCTCTaGCTTCCTGAAGACGATAAGGTTGGTGTAGATGAG +
Preference number: 3 (lower is better)
Translates to: IKVKILLCGLLL*LPEDDKVGVDE
Trigger: CTCATCTACACCAACCTTATCGTCTTCAGGAAGTCAGAGGAGGAGCCCACACAGAAGGATCTTGACTTTGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CCA 72 bp ATGGGTTATTTAGTTAAATTGCAATGTATAATGATGTaGATTTGCCTCCACCCCCGTGTGAGTGTGGCCTGC +
Preference number: 3 (lower is better)
Translates to: MGYLVKLQCIMM*ICLHPRVSVAC
Trigger: GCAGGCCACACTCACACGGGGGTGGAGGCAAATCCACATCATTATACATTGCAATTTAACTAAATAACCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR GCA 72 bp TATTTAGTTAAATTGCAATGTATAATGATGTGGATTTaGCTCCACCCCCGTGTGAGTGTGGCCTGCAATTTT +
Preference number: 3 (lower is better)
Translates to: YLVKLQCIMMWI*LHPRVSVACNF
Trigger: AAAATTGCAGGCCACACTCACACGGGGGTGGAGGCAAATCCACATCATTATACATTGCAATTTAACTAAATA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
CDS-3UTR TCA 90 bp CCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCACGGGCCCCTCCGGATaGGCCCAGGAGCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: PASSAVWLGPQRGQLCQLTGPSG*AQEPRS
Trigger: GGAGCGGGGCTCCTGGGCTCATCCGGAGGGGCCCGT...GAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGG
68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
3UTR CAA 72 bp CTGGCCGTCGCCGCTGCCGCCTCTCAAGGGCCACCTTaGCAGAGGGTTCTACAGTCCCAGGAGGACCTGCTC +
Preference number: 4 (lower is better)
Translates to: LAVAAAASQGPP*QRVLQSQEDLL
Trigger: GAGCAGGTCCTCCTGGGACTGTAGAACCCTCTGCAAAGGTGGCCCTTGAGAGGCGGCAGCGGCGACGGCCAG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
CDS-3UTR CCA 90 bp ACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCAGACGCCCCACCACCCAGGCCCTaGCGCAGCTCCTCGCACAGC +
Preference number: 4 (lower is better)
Translates to: TTLLCSHGKAESGRGSDAPPPRP*RSSSHS
Trigger: GCTGTGCGAGGAGCTGCGCCAGGGCCTGGGTGGTGG...GGCGTCTGAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGT
66% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR TCA 90 bp CTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCAACGGGCCCCTCCGGATaGGCCCAGGAGCCCCGCTCC +
Preference number: 4 (lower is better)
Translates to: LCGWAHKEANFASSELDSTGPSG*AQEPRS
Trigger: GGAGCGGGGCTCCTGGGCTCATCCGGAGGGGCCCGT...TGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp GCCGCGCGGCCTCCTCAGCCTCCGACTCTAGGCGAGCCATCACTCGGAGTAAAATTAGGGATCCAGCTCTaGTCCTTCTCCGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: AARPPQPPTLGEPSLGVKLGIQL*SFSGPT
Trigger: GGTGGGGCCGGAGAAGGAGCAGAGCTGGATCCCTAA...TTTTACTCCGAGTGATGGCTCGCCTAGAGTCGGAGGCTGAGGAGGCCGCGCGGC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
CDS-3UTR CCA 90 bp GGGCTCAGACGCCCCTGTCTCCTGCAGGGAAAGCCACCCAAACAGAGGCTCTGGCCCAGGCTAAGGCCATaGGAGATGAGCAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: GLRRPCLLQGKPPKQRLWPRLRP*EMSRRT
Trigger: TGTGCGCCTGCTCATCTCCCATGGCCTTAGCCTGGG...CCAGAGCCTCTGTTTGGGTGGCTTTCCCTGCAGGAGACAGGGGCGTCTGAGCCC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CCA 90 bp TGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCCCACCACCCAGGCCCTaGCGCAGCTCCTCGCACAGC +
Preference number: 4 (lower is better)
Translates to: CGWAHKEANFASSELDSPPPPRP*RSSSHS
Trigger: GCTGTGCGAGGAGCTGCGCCAGGGCCTGGGTGGTGG...GGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACA
63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp CCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCAGACGCCCTGGGCATCCCGAGGTTaGCCACACTGGCACAAGGTC +
Preference number: 4 (lower is better)
Translates to: PPCYVPTGKQKAAGAQTPWASRG*PHWHKV
Trigger: GACCTTGTGCCAGTGTGGGCAACCTCGGGATGCCCA...GGGCGTCTGAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR GCA 90 bp AACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAGGACCTGGCCGTCGCCGCTaGCGCCTCTCAAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: NFASSELDSPKVRLLWEGPGRRR*RLSRAT
Trigger: GGTGGCCCTTGAGAGGCGGCAGCGGCGACGGCCAGG...TCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp CCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCAGACGCCCGGATACTCGGTAGACTaGGGTCCTGGGGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: PPCYVPTGKQKAAGAQTPGYSVD*GPGASG
Trigger: TCCTGAGGCCCCAGGACCGCAGTCTACCGAGTATCC...GGGCGTCTGAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR GCA 90 bp CTGAGCCACATAGGACTCAAACCGAAGGCGGAAGCGGTTCTCACCACCCAGGCGTTAGGGATCCAGCTCTaGTCCTTCTCCGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: LSHIGLKPKAEAVLTTQALGIQL*SFSGPT
Trigger: GGTGGGGCCGGAGAAGGAGCAGAGCTGGATCCCTAA...CGCCTGGGTGGTGAGAACCGCTTCCGCCTTCGGTTTGAGTCCTATGTGGCTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000210541.2
ENSMUST00000211431.2
CDS-3UTR GCA 90 bp CCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCAGACGCCCCTCGGTAACTACGGCTaGCCCAAAGGCATCCTCCAC +
Preference number: 4 (lower is better)
Translates to: PPCYVPTGKQKAAGAQTPLGNYG*PKGILH
Trigger: GTGGAGGATGCCTTTGGGGCAGCCGTAGTTACCGAG...GGGCGTCTGAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR GCA 90 bp TCCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTACAGCCACACCCACGTaGCGGCCAATGCCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SCFLCCVAGPTKRPTLPATATPT*RPMPVC
Trigger: GCACACAGGCATTGGCCGGCACGTGGGTGTGGCTGT...AGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGGA
61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp AAGCGGCAGGGGCTCAGACGCCCCTGTCTCCTGCAGGGAAAGCCACCCAAACAGAGCATCCATGAGAGATaGCTCCAGGTGGAAGGACCG +
Preference number: 4 (lower is better)
Translates to: KRQGLRRPCLLQGKPPKQSIHER*LQVEGP
Trigger: CGGTCCTTCCACCTGGAGGCATCTCTCATGGATGCT...CTGTTTGGGTGGCTTTCCCTGCAGGAGACAGGGGCGTCTGAGCCCCTGCCGCTT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CCA 90 bp TGGACCTCTCTCTCCAGCCCCCTCAGACGCCGATCGTACTCTCTGATCTGTCCCGTGCTGGCTGTCTGGTaGTCCCTTACAGCCACACCC +
Preference number: 4 (lower is better)
Translates to: WTSLSSPLRRRSYSLICPVLAVW*SLTATP
Trigger: GGGTGTGGCTGTAAGGGACCACCAGACAGCCAGCAC...GGGACAGATCAGAGAGTACGATCGGCGTCTGAGGGGGCTGGAGAGAGAGGTCCA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
CDS-3UTR CCA 90 bp CTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATCAAGCTGGAGGCAGGTaGCCTCTCCCCAGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: LLCGWAHKEANFASSELDQAGGR*PLPRGD
Trigger: GTCCCCTCTGGGGAGAGGCCACCTGCCTCCAGCTTG...ATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
3UTR CAA 72 bp GGCCTCAGCCATCCAAGTCAGGACTCGAGAACAGTGTaGGACCTCTCTCTCCAGCCCCCTCAGACGCCGATC +
Preference number: 4 (lower is better)
Translates to: GLSHPSQDSRTV*DLSLQPPQTPI
Trigger: GATCGGCGTCTGAGGGGGCTGGAGAGAGAGGTCCAACACTGTTCTCGAGTCCTGACTTGGATGGCTGAGGCC
61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
CDS-3UTR TCA 90 bp CCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCCCAGCAGGAAGCAGGTaGGTGCCAGCAGGTCACATT +
Preference number: 4 (lower is better)
Translates to: PASSAVWLGPQRGQLCQLPAGSR*VPAGHI
Trigger: AATGTGACCTGCTGGCACTCACCTGCTTCCTGCTGG...GAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp TTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCAGACGCGACGCAGAAGGTCCTaGAGCCAGGTCTGGAGCACG +
Preference number: 4 (lower is better)
Translates to: LPPCYVPTGKQKAAGAQTRRRRS*SQVWST
Trigger: CGTGCTCCAGACCTGGCTGCAGGACCTTCTGCGTCG...CGTCTGAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR GCA 90 bp TCCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCGGCCAATGCCTGTGTaGAGTCCCCCAGTGACGATC +
Preference number: 4 (lower is better)
Translates to: SCFLCCVAGPTKRPTLPARPMPV*SPPVTI
Trigger: GATCGTCACTGGGGGACTGCACACAGGCATTGGCCG...AGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGGA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp TTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCAGACGACAGCCACACCCACGTaGCGGCCAATGCCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: LPPCYVPTGKQKAAGAQTTATPT*RPMPVC
Trigger: GCACACAGGCATTGGCCGGCACGTGGGTGTGGCTGT...CGTCTGAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
CDS-3UTR GCA 90 bp TCCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTAGAGTCCTCAGCACTTaGCCCACATTGGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: SCFLCCVAGPTKRPTLPARVLST*PTLGGR
Trigger: CCGGCCTCCCAATGTGGGGCAAGTGCTGAGGACTCT...AGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp GACCAGCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGCCTGGCCGTCGCCGCTaGCGCCTCTCAAGGGCCACC +
Preference number: 4 (lower is better)
Translates to: DQLSLLPPCYVPTGKQKAPGRRR*RLSRAT
Trigger: GGTGGCCCTTGAGAGGCGGCAGCGGCGACGGCCAGG...CGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGCTGGTC
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CCA 90 bp ACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCAGACGCCCCCCATAGGCATCTGTaGGCTTCTCCGTGGTGTGCT +
Preference number: 4 (lower is better)
Translates to: TTLLCSHGKAESGRGSDAPHRHL*ASPWCA
Trigger: AGCACACCACGGAGAAGCCCACAGATGCCTATGGGG...GGCGTCTGAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGT
60% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CCA 90 bp CAGACGCCCCTGTCTCCTGCAGGGAAAGCCACCCAAACAGAGGCTCTGGGTCTACCAGTGCTGGCTGTCTaGTGGTCCCTTACAGCCACA +
Preference number: 4 (lower is better)
Translates to: QTPLSPAGKATQTEALGLPVLAV*WSLTAT
Trigger: TGTGGCTGTAAGGGACCACCAGACAGCCAGCACTGG...TAGACCCAGAGCCTCTGTTTGGGTGGCTTTCCCTGCAGGAGACAGGGGCGTCTG
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
CDS-3UTR CCA 90 bp GGGCTCAGACGCCCCTGTCTCCTGCAGGGAAAGCCACCCAAACAGAGGCTCTGGCGGAAAAGTTCACTTTaGGCGATGTCCACGCGGTTC +
Preference number: 4 (lower is better)
Translates to: GLRRPCLLQGKPPKQRLWRKSSL*AMSTRF
Trigger: GAACCGCGTGGACATCGCCCAAAGTGAACTTTTCCG...CCAGAGCCTCTGTTTGGGTGGCTTTCCCTGCAGGAGACAGGGGCGTCTGAGCCC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CCA 90 bp TCCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTGCACTTGCCCCACATTaGGAGGCCGGAGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: SCFLCCVAGPTKRPTLPAALAPH*EAGALQ
Trigger: CTGTAGAGCTCCGGCCTCCCAATGTGGGGCAAGTGC...AGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGGA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp CCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGGGCAGGCCTCGAATaGAATTCCCGGATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: PASSAVWLGPQRGQLCQLRAGLE*NSRMRL
Trigger: CAGCCTCATCCGGGAATTCCATTCGAGGCCTGCCCT...GAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp TCTTCTGCTGAGCCACATAGGACTCAAACCGAAGGCGGAAGCGGTTCTCACCACCGACGCAGAAGGTCCTaGAGCCAGGTCTGGAGCACG +
Preference number: 4 (lower is better)
Translates to: SSAEPHRTQTEGGSGSHHRRRRS*SQVWST
Trigger: CGTGCTCCAGACCTGGCTGCAGGACCTTCTGCGTCG...GTGGTGAGAACCGCTTCCGCCTTCGGTTTGAGTCCTATGTGGCTCAGCAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210541.2
CDS-3UTR GCA 90 bp TTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCAGACGCGGCCAATGCCTGTGTaGAGTCCCCCAGTGACGATC +
Preference number: 4 (lower is better)
Translates to: LPPCYVPTGKQKAAGAQTRPMPV*SPPVTI
Trigger: GATCGTCACTGGGGGACTGCACACAGGCATTGGCCG...CGTCTGAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
CDS-3UTR GCA 90 bp TCTTCTGCTGAGCCACATAGGACTCAAACCGAAGGCGGAAGCGGTTCTCACCACACAGCCACACCCACGTaGCGGCCAATGCCTGTGTGC +
Preference number: 4 (lower is better)
Translates to: SSAEPHRTQTEGGSGSHHTATPT*RPMPVC
Trigger: GCACACAGGCATTGGCCGGCACGTGGGTGTGGCTGT...GTGGTGAGAACCGCTTCCGCCTTCGGTTTGAGTCCTATGTGGCTCAGCAGAAGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
CDS-3UTR GCA 90 bp GCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAACCTTGCTGCTCCCAGTaGTGGCTGTCTGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: ANFASSELDSPKVRLLWEPCCSQ*WLSGGP
Trigger: GGGACCACCAGACAGCCAGCACTGGGAGCAGCAAGG...TTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp CTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCTTGCTGCTCCCAGTaGTGGCTGTCTGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: LCGWAHKEANFASSELDSPCCSQ*WLSGGP
Trigger: GGGACCACCAGACAGCCAGCACTGGGAGCAGCAAGG...TGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp AAGGCCATGGGAGATGAGCAGGCGCACAAATTCAGGCCGGTCATTCAGCAGAGCTGGCCACCACCTTGCTaGTCCCAGTGCTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: KAMGDEQAHKFRPVIQQSWPPPC*SQCWLS
Trigger: AGACAGCCAGCACTGGGAGCAGCAAGGTGGTGGCCA...GCTCTGCTGAATGACCGGCCTGAATTTGTGCGCCTGCTCATCTCCCATGGCCTT
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
CDS-3UTR GCA 90 bp GAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGTGGCCACCACCTTGCTaGTCCCAGTGCTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: EANFASSELDSPKVRLLWWPPPC*SQCWLS
Trigger: AGACAGCCAGCACTGGGAGCAGCAAGGTGGTGGCCA...CCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp TGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACGCTCGGGCATCAGCCTaGATGGCAAGCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: CVAGPTKRPTLPAQSLIHARASA*MASWRQ
Trigger: CTGCCTCCAGCTTGCCATGCAGGCTGATGCCCGAGC...GTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp CTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCAGCTCGGGCATCAGCCTaGATGGCAAGCTGGAGGCAG +
Preference number: 4 (lower is better)
Translates to: LCGWAHKEANFASSELDSARASA*MASWRQ
Trigger: CTGCCTCCAGCTTGCCATGCAGGCTGATGCCCGAGC...TGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAG
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp TCCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTGAGGCTGTAGCGCTGTaGCTTCCAGTAGAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: SCFLCCVAGPTKRPTLPAEAVAL*LPVEVA
Trigger: AGCGACCTCTACTGGAAGGCACAGCGCTACAGCCTC...AGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGGA
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp TTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCAGACGGCACTTGCCCCACATTaGGAGGCCGGAGCTCTACAG +
Preference number: 4 (lower is better)
Translates to: LPPCYVPTGKQKAAGAQTALAPH*EAGALQ
Trigger: CTGTAGAGCTCCGGCCTCCCAATGTGGGGCAAGTGC...CGTCTGAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CCA 90 bp GAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGAGTCTCGGGTGTTCCTaGCAGGGTACCGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: EANFASSELDSPKVRLLWSLGCS*QGTVVH
Trigger: GTGCACCACGGTACCCTGCCAGGAACACCCGAGACT...CCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp GCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAGGGCATCAGCCTGCATaGCAAGCTGGAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: ANFASSELDSPKVRLLWEGHQPA*QAGGRW
Trigger: CCACCTGCCTCCAGCTTGCCATGCAGGCTGATGCCC...TTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp GGTCTGGGGAAGGACAGATTCCCAACATCACACACCTGCTCCACAGGAGCCAAGGGCAGCAAGGCAGAGTaGCTAAGGGCCTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: GLGKDRFPTSHTCSTGAKGSKAE*LRASAI
Trigger: GATGGCTGAGGCCCTTAGCCACTCTGCCTTGCTGCC...CTTGGCTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGTCCTTCCCCAGACC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CCA 90 bp GAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGGCAGCAAGGCAGAGTaGCTAAGGGCCTCAGCCATC +
Preference number: 4 (lower is better)
Translates to: EANFASSELDSPKVRLLWGSKAE*LRASAI
Trigger: GATGGCTGAGGCCCTTAGCCACTCTGCCTTGCTGCC...CCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR TCA 90 bp TGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAAGAGGCAGGGGAGCTaGGCTTGGGTGGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: WAHKEANFASSELDSPKVKRQGS*AWVASS
Trigger: AGAGGATGCCACCCAAGCTCAGCTCCCCTGCCTCTT...CACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR TCA 90 bp TCCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTTCAGCAGAGCATCCATaGGAGATGCCTCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: SCFLCCVAGPTKRPTLPASAEHP*EMPPGG
Trigger: TCCACCTGGAGGCATCTCTCATGGATGCTCTGCTGA...AGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGGA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR TCA 90 bp ACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCAGACGCCTGTGGGCTCCTCCTCTaGCTTCCTGAAGACGATAAG +
Preference number: 4 (lower is better)
Translates to: TTLLCSHGKAESGRGSDACGLLL*LPEDDK
Trigger: CTTATCGTCTTCAGGAAGTCAGAGGAGGAGCCCACA...GGCGTCTGAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR TCA 90 bp CCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCTGTGGGCTCCTCCTCTaGCTTCCTGAAGACGATAAG +
Preference number: 4 (lower is better)
Translates to: PASSAVWLGPQRGQLCQLCGLLL*LPEDDK
Trigger: CTTATCGTCTTCAGGAAGTCAGAGGAGGAGCCCACA...GAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp ATGGTCTGGGGAAGGACAGATTCCCAACATCACACACCTGCTCCACAGGAGCCATTAGGGATCCAGCTCTaGTCCTTCTCCGGCCCCACC +
Preference number: 4 (lower is better)
Translates to: MVWGRTDSQHHTPAPQEPLGIQL*SFSGPT
Trigger: GGTGGGGCCGGAGAAGGAGCAGAGCTGGATCCCTAA...TGGCTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGTCCTTCCCCAGACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
CDS-3UTR GCA 90 bp GCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGCGATCCAGGCCCCTGTaGTCTGGGCGGCTCTCACCA +
Preference number: 4 (lower is better)
Translates to: ALFITTLLCSHGKAESGRRSRPL*SGRLSP
Trigger: TGGTGAGAGCCGCCCAGAGCACAGGGGCCTGGATCG...CCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR GCA 90 bp TGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGCGGCCAATGCCTGTGTaGAGTCCCCCAGTGACGATC +
Preference number: 4 (lower is better)
Translates to: WAHKEANFASSELDSPKVRPMPV*SPPVTI
Trigger: GATCGTCACTGGGGGACTGCACACAGGCATTGGCCG...CACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp AACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAGGACCTTGCTGCTCCCAGTaGTGGCTGTCTGGTGGTCCC +
Preference number: 4 (lower is better)
Translates to: NFASSELDSPKVRLLWEGPCCSQ*WLSGGP
Trigger: GGGACCACCAGACAGCCAGCACTGGGAGCAGCAAGG...TCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp ATGGTCTGGGGAAGGACAGATTCCCAACATCACACACCTGCTCCACAGGAGCCATGGCCACCACCTTGCTaGTCCCAGTGCTGGCTGTCT +
Preference number: 4 (lower is better)
Translates to: MVWGRTDSQHHTPAPQEPWPPPC*SQCWLS
Trigger: AGACAGCCAGCACTGGGAGCAGCAAGGTGGTGGCCA...TGGCTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGTCCTTCCCCAGACCAT
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
CDS-3UTR GCA 90 bp GCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAAGAGTCCTCAGCACTTaGCCCACATTGGGAGGCCGG +
Preference number: 4 (lower is better)
Translates to: ANFASSELDSPKVRLLWERVLST*PTLGGR
Trigger: CCGGCCTCCCAATGTGGGGCAAGTGCTGAGGACTCT...TTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp TGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGGGATACTCGGTAGACTaGGGTCCTGGGGCCTCAGGA +
Preference number: 4 (lower is better)
Translates to: WAHKEANFASSELDSPKVGYSVD*GPGASG
Trigger: TCCTGAGGCCCCAGGACCGCAGTCTACCGAGTATCC...CACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp CCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCCAGCAGCTTCCGCTCTaGTTCCTTAGAGAGACAGAC +
Preference number: 4 (lower is better)
Translates to: PASSAVWLGPQRGQLCQLQQLPL*FLRETD
Trigger: GTCTGTCTCTCTAAGGAAGCAGAGCGGAAGCTGCTG...GAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGG
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp CTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCCGAGGTTGCCCACACTaGCACAAGGTCCCTCCCGCA +
Preference number: 4 (lower is better)
Translates to: LYYHPVMFPRESRKRQGLRGCPH*HKVPPA
Trigger: TGCGGGAGGGACCTTGTGCCAGTGTGGGCAACCTCG...GAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CCA 90 bp GAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGCCAGTGCTGGCTGTCTaGTGGTCCCTTACAGCCACA +
Preference number: 4 (lower is better)
Translates to: EANFASSELDSPKVRLLWPVLAV*WSLTAT
Trigger: TGTGGCTGTAAGGGACCACCAGACAGCCAGCACTGG...CCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp TGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCCCAGGCTAAGGCCATaGGAGATGAGCAGGCGCACA +
Preference number: 4 (lower is better)
Translates to: CCVAGPTKRPTLPAQSLIPRLRP*EMSRRT
Trigger: TGTGCGCCTGCTCATCTCCCATGGCCTTAGCCTGGG...AATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp GCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAAGTCTCGGGTGTTCCTaGCAGGGTACCGTGGTGCAC +
Preference number: 4 (lower is better)
Translates to: ANFASSELDSPKVRLLWESLGCS*QGTVVH
Trigger: GTGCACCACGGTACCCTGCCAGGAACACCCGAGACT...TTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp GCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGCAAGCTGGAGGCAGGTaGCCTCTCCCCAGAGGGGAC +
Preference number: 4 (lower is better)
Translates to: ALFITTLLCSHGKAESGRQAGGR*PLPRGD
Trigger: GTCCCCTCTGGGGAGAGGCCACCTGCCTCCAGCTTG...CCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CCA 90 bp TGGGGAAGGACAGATTCCCAACATCACACACCTGCTCCACAGGAGCCAAGCATGCAGGAAGGCAGTCACTaGGGCACCCCAGAAGTCCGA +
Preference number: 4 (lower is better)
Translates to: WGRTDSQHHTPAPQEPSMQEGSH*GTPEVR
Trigger: TCGGACTTCTGGGGTGCCCCAGTGACTGCCTTCCTG...CATGCTTGGCTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGTCCTTCCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
3UTR CAA 72 bp TGGTGCACACGTTTCTCCCAACAGAGTCCTCAGCACTaGCCCCACATTGGGAGGCCGGAGCTCTACAGTTCC +
Preference number: 4 (lower is better)
Translates to: WCTRFSQQSPQH*PHIGRPELYSS
Trigger: GGAACTGTAGAGCTCCGGCCTCCCAATGTGGGGCAAGTGCTGAGGACTCTGTTGGGAGAAACGTGTGCACCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CAA 72 bp AGCAAGAAGACGATAAGGAGCAACACCACCAGCCAGTaGGCATACTGGGACACACAGGAGCCTGCGACGGGC +
Preference number: 4 (lower is better)
Translates to: SKKTIRSNTTSQ*AYWDTQEPATG
Trigger: GCCCGTCGCAGGCTCCTGTGTGTCCCAGTATGCCAACTGGCTGGTGGTGTTGCTCCTTATCGTCTTCTTGCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
CDS-3UTR TCA 90 bp GCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAACTCTCTACCTGGGCCTaGAGAACCTCAGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: ANFASSELDSPKVRLLWELSTWA*RTSGSP
Trigger: AGGAGACCCTGAGGTTCTTCAGGCCCAGGTAGAGAG...TTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR TCA 90 bp ATGGTCTGGGGAAGGACAGATTCCCAACATCACACACCTGCTCCACAGGAGCCACCTCGCACAGCAACGTaGAGGCCCAGAAGTACAGCA +
Preference number: 4 (lower is better)
Translates to: MVWGRTDSQHHTPAPQEPPRTAT*RPRSTA
Trigger: TGCTGTACTTCTGGGCCTTCACGTTGCTGTGCGAGG...TGGCTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGTCCTTCCCCAGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR TCA 90 bp TGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGCCTCGCACAGCAACGTaGAGGCCCAGAAGTACAGCA +
Preference number: 4 (lower is better)
Translates to: WAHKEANFASSELDSPKVPRTAT*RPRSTA
Trigger: TGCTGTACTTCTGGGCCTTCACGTTGCTGTGCGAGG...CACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR TCA 90 bp CTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATAATGGAATTCCCGGATaGGGCTGTAGCGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: LLCGWAHKEANFASSELDNGIPG*GCSAVP
Trigger: AGGCACAGCGCTACAGCCTCATCCGGGAATTCCATT...ATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR TCA 90 bp TGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAATGGAATTCCCGGATaGGGCTGTAGCGCTGTGCCT +
Preference number: 4 (lower is better)
Translates to: CGWAHKEANFASSELDSPNGIPG*GCSAVP
Trigger: AGGCACAGCGCTACAGCCTCATCCGGGAATTCCATT...GGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp CTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCAAGCGCTTGGAGAACTTaGCACAGCAGAGGGCACGTC +
Preference number: 4 (lower is better)
Translates to: LCGWAHKEANFASSELDSSAWRT*HSRGHV
Trigger: GACGTGCCCTCTGCTGTGGCAAGTTCTCCAAGCGCT...TGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp CTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCAGAGGCTGTAGCGCTGTaGCTTCCAGTAGAGGTCGCT +
Preference number: 4 (lower is better)
Translates to: LCGWAHKEANFASSELDSEAVAL*LPVEVA
Trigger: AGCGACCTCTACTGGAAGGCACAGCGCTACAGCCTC...TGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp TCCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGCAGCTTCCGCTCTaGTTCCTTAGAGAGACAGAC +
Preference number: 4 (lower is better)
Translates to: SCFLCCVAGPTKRPTLPAQQLPL*FLRETD
Trigger: GTCTGTCTCTCTAAGGAAGCAGAGCGGAAGCTGCTG...AGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp AACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAGGACAGGAAGGCAGTCACTaGGGCACCCCAGAAGTCCGA +
Preference number: 4 (lower is better)
Translates to: NFASSELDSPKVRLLWEGQEGSH*GTPEVR
Trigger: TCGGACTTCTGGGGTGCCCCAGTGACTGCCTTCCTG...TCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp TGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACAGCCAGTTGGCATACTaGGACACACAGGAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: CVAGPTKRPTLPAQSLIHSQLAY*DTQEPA
Trigger: CGCAGGCTCCTGTGTGTCCCAGTATGCCAACTGGCT...GTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp ATGGTCTGGGGAAGGACAGATTCCCAACATCACACACCTGCTCCACAGGAGCCAAGGGCAGGCCTCGAATaGAATTCCCGGATGAGGCTG +
Preference number: 4 (lower is better)
Translates to: MVWGRTDSQHHTPAPQEPRAGLE*NSRMRL
Trigger: CAGCCTCATCCGGGAATTCCATTCGAGGCCTGCCCT...TGGCTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGTCCTTCCCCAGACCAT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
3UTR CAA 72 bp CCCAGAAGTACAGCAGCAGCTCGGAGACACTTGGCTTaGTGGGCTGGAAATCCACCAGCAACACGTGGGCAA +
Preference number: 4 (lower is better)
Translates to: PRSTAAARRHLA*WAGNPPATRGQ
Trigger: TTGCCCACGTGTTGCTGGTGGATTTCCAGCCCACAAAGCCAAGTGTCTCCGAGCTGCTGCTGTACTTCTGGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
CDS-3UTR TCA 90 bp CCAGCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAAGAGGCAGGGGAGCTaGGCTTGGGTGGCATCCTCT +
Preference number: 4 (lower is better)
Translates to: PALFITTLLCSHGKAESGKRQGS*AWVASS
Trigger: AGAGGATGCCACCCAAGCTCAGCTCCCCTGCCTCTT...GCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGCTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR TCA 90 bp AAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCCTCTCTACCTGGGCCTaGAGAACCTCAGGGTCTCCT +
Preference number: 4 (lower is better)
Translates to: KEANFASSELDSPKVRLLLSTWA*RTSGSP
Trigger: AGGAGACCCTGAGGTTCTTCAGGCCCAGGTAGAGAG...GAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR TCA 90 bp GCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGCTCATCCAGGTAGGCTaGGGCCTCAGAGCTCCCACA +
Preference number: 4 (lower is better)
Translates to: ALFITTLLCSHGKAESGRLIQVG*GLRAPT
Trigger: TGTGGGAGCTCTGAGGCCTCAGCCTACCTGGATGAG...CCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR TCA 90 bp AAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCAAGAGCAGAGGCCACTaGGTTGGAGCCCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: KEANFASSELDSPKVRLLKSRGH*VGALLP
Trigger: TGGGAGAAGGGCTCCAACTCAGTGGCCTCTGCTCTT...GAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR TCA 90 bp TGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTGGAGCCCCGCTCCATTaGGCAGTTACCTGGAATCAT +
Preference number: 4 (lower is better)
Translates to: CCVAGPTKRPTLPAQSLIGAPLH*AVTWNH
Trigger: ATGATTCCAGGTAACTGCTCAATGGAGCGGGGCTCC...AATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR TCA 90 bp ATGGTCTGGGGAAGGACAGATTCCCAACATCACACACCTGCTCCACAGGAGCCAGCCGATCGTACTCTCTaGTCTGTCCCAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: MVWGRTDSQHHTPAPQEPADRTL*SVPAAS
Trigger: TGAAGCAGCTGGGACAGATCAGAGAGTACGATCGGC...TGGCTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGTCCTTCCCCAGACCAT
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR TCA 90 bp TGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGGCCGATCGTACTCTCTaGTCTGTCCCAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: WAHKEANFASSELDSPKVADRTL*SVPAAS
Trigger: TGAAGCAGCTGGGACAGATCAGAGAGTACGATCGGC...CACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp GCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAAGCATCCATGAGAGATaGCTCCAGGTGGAAGGACCG +
Preference number: 4 (lower is better)
Translates to: ANFASSELDSPKVRLLWESIHER*LQVEGP
Trigger: CGGTCCTTCCACCTGGAGGCATCTCTCATGGATGCT...TTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp TGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTAGTCCCAGGAGGACCTaGTCCATTGATGCTGCTGTC +
Preference number: 4 (lower is better)
Translates to: CCVAGPTKRPTLPAQSLISPRRT*SIDAAV
Trigger: GACAGCAGCATCAATGGAGCAGGTCCTCCTGGGACT...AATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp GCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAACTGTGGGCTTCTCCGTaGTGTGCTCATCACTGTTCC +
Preference number: 4 (lower is better)
Translates to: ANFASSELDSPKVRLLWELWASP*CAHHCS
Trigger: GGAACAGTGATGAGCACACCACGGAGAAGCCCACAG...TTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CCA 90 bp TCCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTGAGAAGAAGGAGCACTaGGATGTCAATTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: SCFLCCVAGPTKRPTLPAEKKEH*DVNSSP
Trigger: GGGACTGGAATTGACATCCCAGTGCTCCTTCTTCTC...AGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp CTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATCAGAGGCCACTGAGTTaGAGCCCTTCTCCCAGAAAT +
Preference number: 4 (lower is better)
Translates to: LLCGWAHKEANFASSELDQRPLS*SPSPRN
Trigger: ATTTCTGGGAGAAGGGCTCCAACTCAGTGGCCTCTG...ATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
3UTR CAA 72 bp GGCCGGAGCTCTACAGTTCCATTTACAGGAGGGGATTaGCTGCTACTAGCATGGGACGCCTGGTCCAGAAGA +
Preference number: 4 (lower is better)
Translates to: GRSSTVPFTGGD*LLLAWDAWSRR
Trigger: TCTTCTGGACCAGGCGTCCCATGCTAGTAGCAGCAAATCCCCTCCTGTAAATGGAACTGTAGAGCTCCGGCC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CAA 72 bp CGCTTGTCCCGAGCTTGTGCCAACAGGAAGTTCTCTTaGTGCACAGACTCCCAAGTCAGCAGCTTCCGCTCT +
Preference number: 4 (lower is better)
Translates to: RLSRACANRKFS*CTDSQVSSFRS
Trigger: AGAGCGGAAGCTGCTGACTTGGGAGTCTGTGCACAAAGAGAACTTCCTGTTGGCACAAGCTCGGGACAAGCG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
CDS-3UTR TCA 90 bp AACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAGGATCAGCAGAGCATCCATaGGAGATGCCTCCAGGTGGA +
Preference number: 4 (lower is better)
Translates to: NFASSELDSPKVRLLWEGSAEHP*EMPPGG
Trigger: TCCACCTGGAGGCATCTCTCATGGATGCTCTGCTGA...TCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR TCA 90 bp GGGAAGGACAGATTCCCAACATCACACACCTGCTCCACAGGAGCCAAGCATGTGGGAACAGCAGGTAACTaGCCACATTACCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: GKDRFPTSHTCSTGAKHVGTAGN*PHYPGR
Trigger: CCTTCCTGGGTAATGTGGTCAGTTACCTGCTGTTCC...CACATGCTTGGCTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGTCCTTCCC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR TCA 90 bp GCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAGGAACAGCAGGTAACTaGCCACATTACCCAGGAAGG +
Preference number: 4 (lower is better)
Translates to: ANFASSELDSPKVRLLWEGTAGN*PHYPGR
Trigger: CCTTCCTGGGTAATGTGGTCAGTTACCTGCTGTTCC...TTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR TCA 90 bp AACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAGGAGGAGCCCCGCTCCATTaGGCAGTTACCTGGAATCAT +
Preference number: 4 (lower is better)
Translates to: NFASSELDSPKVRLLWEGGAPLH*AVTWNH
Trigger: ATGATTCCAGGTAACTGCTCAATGGAGCGGGGCTCC...TCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR TCA 90 bp AAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCGCCGATCGTACTCTCTaGTCTGTCCCAGCTGCTTCA +
Preference number: 4 (lower is better)
Translates to: KEANFASSELDSPKVRLLADRTL*SVPAAS
Trigger: TGAAGCAGCTGGGACAGATCAGAGAGTACGATCGGC...GAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp TGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCAGGAAGCAGGTGAGTaGCAGCAGGTCACATTGGTT +
Preference number: 4 (lower is better)
Translates to: CVAGPTKRPTLPAQSLIHQEAGE*QQVTLV
Trigger: AACCAATGTGACCTGCTGGCACTCACCTGCTTCCTG...GTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp TGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTTTCACCGTGAAGATGTaGAGCAGGCGCAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: CCVAGPTKRPTLPAQSLIFTVKM*SRRSVK
Trigger: CTTCACACTGCGCCTGCTGCACATCTTCACGGTGAA...AATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp AACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAGGACTGATCTGTCCCAGCTaGTTCAGTGCAGTGTCCACC +
Preference number: 4 (lower is better)
Translates to: NFASSELDSPKVRLLWEGLICPS*FSAVST
Trigger: GGTGGACACTGCACTGAAGCAGCTGGGACAGATCAG...TCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp ACCAGCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGGTGCTGGCTGTCTGGTaGTCCCTTACAGCCACACCC +
Preference number: 4 (lower is better)
Translates to: TSSLYYHPVMFPRESRKRVLAVW*SLTATP
Trigger: GGGTGTGGCTGTAAGGGACCACCAGACAGCCAGCAC...CCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGCTGGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
CDS-3UTR CCA 90 bp CTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATGAGAAGAAGGAGCACTaGGATGTCAATTCCAGTCCC +
Preference number: 4 (lower is better)
Translates to: LLCGWAHKEANFASSELDEKKEH*DVNSSP
Trigger: GGGACTGGAATTGACATCCCAGTGCTCCTTCTTCTC...ATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp TGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACGGAGCTGAGCTTGGGTaGCATCCTCTATCCGCTTTA +
Preference number: 4 (lower is better)
Translates to: CVAGPTKRPTLPAQSLIHGAELG*HPLSAL
Trigger: TAAAGCGGATAGAGGATGCCACCCAAGCTCAGCTCC...GTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp GCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAACGGAAAAGTTCACTTTaGGCGATGTCCACGCGGTTC +
Preference number: 4 (lower is better)
Translates to: ANFASSELDSPKVRLLWERKSSL*AMSTRF
Trigger: GAACCGCGTGGACATCGCCCAAAGTGAACTTTTCCG...TTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp CACACCTGCTCCACAGGAGCCAAGCATGTGCGAAAATCCTCATCAAATGGTTTTGGGCATCAGCCTGCATaGCAAGCTGGAGGCAGGTGG +
Preference number: 4 (lower is better)
Translates to: HTCSTGAKHVRKSSSNGFGHQPA*QAGGRW
Trigger: CCACCTGCCTCCAGCTTGCCATGCAGGCTGATGCCC...AAAACCATTTGATGAGGATTTTCGCACATGCTTGGCTCCTGTGGAGCAGGTGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CCA 90 bp GCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGAGCCAGTTGGCATACTaGGACACACAGGAGCCTGCG +
Preference number: 4 (lower is better)
Translates to: ALFITTLLCSHGKAESGRSQLAY*DTQEPA
Trigger: CGCAGGCTCCTGTGTGTCCCAGTATGCCAACTGGCT...CCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CCA 90 bp AACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAGGAACACCACCAGCCAGTTaGCATACTGGGACACACAGG +
Preference number: 4 (lower is better)
Translates to: NFASSELDSPKVRLLWEGTPPAS*HTGTHR
Trigger: CCTGTGTGTCCCAGTATGCCAACTGGCTGGTGGTGT...TCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
3UTR CAA 72 bp ATCCATGAGAGATGCCTCCAGGTGGAAGGACCGCCATaGGATGTCCCCACGGAAAAGTTCACTTTGGGCGAT +
Preference number: 4 (lower is better)
Translates to: IHERCLQVEGPP*DVPTEKFTLGD
Trigger: ATCGCCCAAAGTGAACTTTTCCGTGGGGACATCCAATGGCGGTCCTTCCACCTGGAGGCATCTCTCATGGAT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
CDS-3UTR TCA 90 bp ACCAGCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGAAGAGCAGAGGCCACTaGGTTGGAGCCCTTCTCCCA +
Preference number: 4 (lower is better)
Translates to: TSSLYYHPVMFPRESRKRKSRGH*VGALLP
Trigger: TGGGAGAAGGGCTCCAACTCAGTGGCCTCTGCTCTT...CCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGCTGGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR TCA 90 bp GACCAGCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGCCAGCAGGAAGCAGGTaGGTGCCAGCAGGTCACATT +
Preference number: 4 (lower is better)
Translates to: DQLSLLPPCYVPTGKQKAPAGSR*VPAGHI
Trigger: AATGTGACCTGCTGGCACTCACCTGCTTCCTGCTGG...CGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGCTGGTC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR GCA 90 bp ACAGATTCCCAACATCACACACCTGCTCCACAGGAGCCAAGCATGTGCGAAAATAGCGCTTGGAGAACTTaGCACAGCAGAGGGCACGTC +
Preference number: 4 (lower is better)
Translates to: TDSQHHTPAPQEPSMCENSAWRT*HSRGHV
Trigger: GACGTGCCCTCTGCTGTGGCAAGTTCTCCAAGCGCT...ATTTTCGCACATGCTTGGCTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR GCA 90 bp AAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTTCACCGTGAAGATGTaGAGCAGGCGCAGTGTGAAG +
Preference number: 4 (lower is better)
Translates to: KEANFASSELDSPKVRLLFTVKM*SRRSVK
Trigger: CTTCACACTGCGCCTGCTGCACATCTTCACGGTGAA...GAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp AACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAGGAATCTTGGGCCCCAGCTaGTTGTTCACCGTGAAGATG +
Preference number: 4 (lower is better)
Translates to: NFASSELDSPKVRLLWEGILGPS*LFTVKM
Trigger: CATCTTCACGGTGAACAAGCAGCTGGGGCCCAAGAT...TCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp CTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCAAGACACTTGGCTTTGTaGGCTGGAAATCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: LCGWAHKEANFASSELDSRHLAL*AGNPPA
Trigger: TGCTGGTGGATTTCCAGCCCACAAAGCCAAGTGTCT...TGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CCA 90 bp CCAGCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCACACCACCAGCCAGTTaGCATACTGGGACACACAGG +
Preference number: 4 (lower is better)
Translates to: PALFITTLLCSHGKAESGTPPAS*HTGTHR
Trigger: CCTGTGTGTCCCAGTATGCCAACTGGCTGGTGGTGT...GCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGCTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
3UTR CAA 72 bp ATTTTGCTCACTATGACAATCTTGGGCCCCAGCTGCTaGTTCACCGTGAAGATGTGCAGCAGGCGCAGTGTG +
Preference number: 4 (lower is better)
Translates to: ILLTMTILGPSC*FTVKMCSRRSV
Trigger: CACACTGCGCCTGCTGCACATCTTCACGGTGAACAAGCAGCTGGGGCCCAAGATTGTCATAGTGAGCAAAAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
CDS-3UTR TCA 90 bp CTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCATCATTTTGCTCACTATaGCAATCTTGGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LCGWAHKEANFASSELDSSFCSL*QSWAPA
Trigger: AGCTGGGGCCCAAGATTGTCATAGTGAGCAAAATGA...TGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR GCA 90 bp CAGCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGCTTCTCCGTGGTGTaGTCATCACTGTTCCACTCG +
Preference number: 4 (lower is better)
Translates to: QLSLLPPCYVPTGKQKAAGFSVV*SSLFHS
Trigger: CGAGTGGAACAGTGATGAGCACACCACGGAGAAGCC...TGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGCTG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR GCA 90 bp ACCAGCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCTGATCTGTCCCAGCTaGTTCAGTGCAGTGTCCACC +
Preference number: 4 (lower is better)
Translates to: TSSLYYHPVMFPRESRKRLICPS*FSAVST
Trigger: GGTGGACACTGCACTGAAGCAGCTGGGACAGATCAG...CCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGCTGGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR TCA 90 bp CTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCTCATTTTGCTCACTATaGCAATCTTGGGCCCCAGCT +
Preference number: 4 (lower is better)
Translates to: LYYHPVMFPRESRKRQGLSFCSL*QSWAPA
Trigger: AGCTGGGGCCCAAGATTGTCATAGTGAGCAAAATGA...GAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR GCA 90 bp GACCAGCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGCAGGAAGCAGGTGAGTaGCAGCAGGTCACATTGGTT +
Preference number: 4 (lower is better)
Translates to: DQLSLLPPCYVPTGKQKAQEAGE*QQVTLV
Trigger: AACCAATGTGACCTGCTGGCACTCACCTGCTTCCTG...CGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGCTGGTC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR GCA 90 bp ACCAGCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGATCTTGGGCCCCAGCTaGTTGTTCACCGTGAAGATG +
Preference number: 4 (lower is better)
Translates to: TSSLYYHPVMFPRESRKRILGPS*LFTVKM
Trigger: CATCTTCACGGTGAACAAGCAGCTGGGGCCCAAGAT...CCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGCTGGT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CCA 90 bp CACACACCTGCTCCACAGGAGCCAAGCATGTGCGAAAATCCTCATCAAATGGTTGGAGCTGAGCTTGGGTaGCATCCTCTATCCGCTTTA +
Preference number: 4 (lower is better)
Translates to: HTPAPQEPSMCENPHQMVGAELG*HPLSAL
Trigger: TAAAGCGGATAGAGGATGCCACCCAAGCTCAGCTCC...AACCATTTGATGAGGATTTTCGCACATGCTTGGCTCCTGTGGAGCAGGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
3UTR CAA 72 bp GCAGAGGGTTCTACAGTCCCAGGAGGACCTGCTCCATaGATGCTGCTGTCCATATCAAAGTCAAGATCCTTC +
Preference number: 4 (lower is better)
Translates to: AEGSTVPGGPAP*MLLSISKSRSF
Trigger: GAAGGATCTTGACTTTGATATGGACAGCAGCATCAATGGAGCAGGTCCTCCTGGGACTGTAGAACCCTCTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
CDS-3UTR CCA 90 bp ACAGATTCCCAACATCACACACCTGCTCCACAGGAGCCAAGCATGTGCGAAAATAGACACTTGGCTTTGTaGGCTGGAAATCCACCAGCA +
Preference number: 4 (lower is better)
Translates to: TDSQHHTPAPQEPSMCENRHLAL*AGNPPA
Trigger: TGCTGGTGGATTTCCAGCCCACAAAGCCAAGTGTCT...ATTTTCGCACATGCTTGGCTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
3UTR CAA 72 bp ATTTACCTACTCAAATCTGCATCATCTGTTTGTATGTaGCCTGAGCAGATGACAGCAGCGCCCACCCTCCTC +
Preference number: 4 (lower is better)
Translates to: IYLLKSASSVCM*PEQMTAAPTLL
Trigger: GAGGAGGGTGGGCGCTGCTGTCATCTGCTCAGGCAACATACAAACAGATGATGCAGATTTGAGTAGGTAAAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
3UTR CAA 72 bp AATACATCCTTCATCATTTTGCTCACTATGACAATCTaGGGCCCCAGCTGCTTGTTCACCGTGAAGATGTGC +
Preference number: 4 (lower is better)
Translates to: NTSFIILLTMTI*GPSCLFTVKMC
Trigger: GCACATCTTCACGGTGAACAAGCAGCTGGGGCCCAAGATTGTCATAGTGAGCAAAATGATGAAGGATGTATT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000211431.2
CDS TCA 90 bp CAGCCACACCCACGTGCCGGCCAATGCCTGTGTGCAGTCCCCCAGTaGCGATCCAGGCCCCTGTGCTCTGGGCGGCTCTCACCAGCCCGC +
Preference number: 5 (lower is better)
Translates to: QPHPRAGQCLCAVPQ*RSRPLCSGRLSPAR
Trigger: GCGGGCTGGTGAGAGCCGCCCAGAGCACAGGGGCCTGGATCGTCACTGGGGGACTGCACACAGGCATTGGCCGGCACGTGGGTGTGGCTG
70% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS CCA 90 bp GTCCCAGCTGCTTCAGTGCAGTGTCCACCGGAAGTGCTCGAAGACTaGGGAGGCGGGCAAGTTAGCCCTGCGACACCTGCGACACCTGCG +
Preference number: 5 (lower is better)
Translates to: VPAASVQCPPEVLED*GGGQVSPATPATPA
Trigger: CGCAGGTGTCGCAGGTGTCGCAGGGCTAACTTGCCCGCCTCCCCAGTCTTCGAGCACTTCCGGTGGACACTGCACTGAAGCAGCTGGGAC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209506.2
CDS TCA 90 bp CGACACCTGCGACACCTGCGCAGCCACTTGATGAGGAGGCGCACATaGGAGATGATGATGAGGGGTGGGGCCAGGGCAGGCCTCGAATGG +
Preference number: 5 (lower is better)
Translates to: RHLRHLRSHLMRRRT*EMMMRGGARAGLEW
Trigger: CCATTCGAGGCCTGCCCTGGCCCCACCCCTCATCATCATCTCTCATGTGCGCCTCCTCATCAAGTGGCTGCGCAGGTGTCGCAGGTGTCG
63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS CCA 90 bp GTAACTACGGCTGCCCCAAAGGCATCCTCCACAGCCACAGAAGGGTaGGCATCCCGAGGTTGCCCACACTGGCACAAGGTCCCTCCCGCA +
Preference number: 5 (lower is better)
Translates to: VTTAAPKASSTATEG*ASRGCPHWHKVPPA
Trigger: TGCGGGAGGGACCTTGTGCCAGTGTGGGCAACCTCGGGATGCCCACCCTTCTGTGGCTGTGGAGGATGCCTTTGGGGCAGCCGTAGTTAC
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS CCA 90 bp CCGCTCTGCTTCCTTAGAGAGACAGACACGGAAGTGCTCGAAGACTaGGGAGGCGGGCAAGTTAGCCCTGCGACACCTGCGACACCTGCG +
Preference number: 5 (lower is better)
Translates to: PLCFLRETDTEVLED*GGGQVSPATPATPA
Trigger: CGCAGGTGTCGCAGGTGTCGCAGGGCTAACTTGCCCGCCTCCCCAGTCTTCGAGCACTTCCGTGTCTGTCTCTCTAAGGAAGCAGAGCGG
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS GCA 90 bp TCCAGCCCCCTCAGACGCCGATCGTACTCTCTGATCTGTCCCAGCTaGTTCAGTGCAGTGTCCACCGGAAGTGCTCGAAGACTGGGGAGG +
Preference number: 5 (lower is better)
Translates to: SSPLRRRSYSLICPS*FSAVSTGSARRLGR
Trigger: CCTCCCCAGTCTTCGAGCACTTCCGGTGGACACTGCACTGAAGCAGCTGGGACAGATCAGAGAGTACGATCGGCGTCTGAGGGGGCTGGA
61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000209506.2
CDS TCA 90 bp GTTGGACCTCTCTCTCCAGCCCCCTCAGACGCCGATCGTACTCTCTaGTCTGTCCCAGCTGCTTCAGTGCAGTGTCCACCGGAAGTGCTC +
Preference number: 5 (lower is better)
Translates to: VGPLSPAPSDADRTL*SVPAASVQCPPEVL
Trigger: GAGCACTTCCGGTGGACACTGCACTGAAGCAGCTGGGACAGATCAGAGAGTACGATCGGCGTCTGAGGGGGCTGGAGAGAGAGGTCCAAC
60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000209506.2
CDS-3UTR CAA 90 bp TGGGGAAGGACAGATTCCCAACATCACACACCTGCTCCACAGGAGCCAAGCATGCACGCCACCGGTACCTaGCGGGGAATGAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: WGRTDSQHHTPAPQEPSMHATGT*RGMSPW
Trigger: CCAAGGGCTCATTCCCCGCAAGGTACCGGTGGCGTG...CATGCTTGGCTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGTCCTTCCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
CDS-3UTR CAA 90 bp GCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAACACGCCACCGGTACCTaGCGGGGAATGAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: ANFASSELDSPKVRLLWEHATGT*RGMSPW
Trigger: CCAAGGGCTCATTCCCCGCAAGGTACCGGTGGCGTG...TTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp TGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCACGCCACCGGTACCTaGCGGGGAATGAGCCCTTGG +
Preference number: 5 (lower is better)
Translates to: CVAGPTKRPTLPAQSLIHHATGT*RGMSPW
Trigger: CCAAGGGCTCATTCCCCGCAAGGTACCGGTGGCGTG...GTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000042194.10
ENSMUST00000211431.2
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp AAGCGGCAGGGGCTCAGACGCCCCTGTCTCCTGCAGGGAAAGCCACCCAAACAGCTCACTATGACAATCTaGGGCCCCAGCTGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: KRQGLRRPCLLQGKPPKQLTMTI*GPSCLF
Trigger: GAACAAGCAGCTGGGGCCCAAGATTGTCATAGTGAG...CTGTTTGGGTGGCTTTCCCTGCAGGAGACAGGGGCGTCTGAGCCCCTGCCGCTT
60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CAA 90 bp GGGAAGGACAGATTCCCAACATCACACACCTGCTCCACAGGAGCCAAGCATGTGGTGGGCATCCCGAGGTaGCCCACACTGGCACAAGGT +
Preference number: 5 (lower is better)
Translates to: GKDRFPTSHTCSTGAKHVVGIPR*PTLAQG
Trigger: ACCTTGTGCCAGTGTGGGCAACCTCGGGATGCCCAC...CACATGCTTGGCTCCTGTGGAGCAGGTGTGTGATGTTGGGAATCTGTCCTTCCC
59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CAA 90 bp TCCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTTTGGGCCCCAGCTGCTaGTTCACCGTGAAGATGTGC +
Preference number: 5 (lower is better)
Translates to: SCFLCCVAGPTKRPTLPALGPSC*FTVKMC
Trigger: GCACATCTTCACGGTGAACAAGCAGCTGGGGCCCAA...AGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGGA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp CCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGGAGCCCCGCTCCATaGAGCAGTTACCTGGAATCA +
Preference number: 5 (lower is better)
Translates to: PASSAVWLGPQRGQLCQLRSPAP*SSYLES
Trigger: TGATTCCAGGTAACTGCTCAATGGAGCGGGGCTCCT...GAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGG
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS TCA 90 bp GGTCAGACAGCCGGAGAAAGTTGCTGTGCTTTCGGCCAGAGTACGTaGAGTCCAGGTCCCCATAGGCATCTGTGGGCTTCTCCGTGGTGT +
Preference number: 5 (lower is better)
Translates to: GQTAGESCCAFGQST*SPGPHRHLWASPWC
Trigger: ACACCACGGAGAAGCCCACAGATGCCTATGGGGACCTGGACTTCACGTACTCTGGCCGAAAGCACAGCAACTTTCTCCGGCTGTCTGACC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CAA 90 bp TGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTAGCACTTGCCCCACATaGGGAGGCCGGAGCTCTACA +
Preference number: 5 (lower is better)
Translates to: CCVAGPTKRPTLPAQSLISTCPT*GGRSST
Trigger: TGTAGAGCTCCGGCCTCCCAATGTGGGGCAAGTGCT...AATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp TTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGGCTCAGACGGACTCGAGAACAGTGTaGGACCTCTCTCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: LPPCYVPTGKQKAAGAQTDSRTV*DLSLQP
Trigger: GGGCTGGAGAGAGAGGTCCAACACTGTTCTCGAGTC...CGTCTGAGCCCCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CAA 90 bp CCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCGGGCTTGTTCAAAGCTaGCATCCGTTGATGGTTGCT +
Preference number: 5 (lower is better)
Translates to: PASSAVWLGPQRGQLCQLGLVQS*HPLMVA
Trigger: AGCAACCATCAACGGATGCAAGCTTTGAACAAGCCC...GAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp CTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCAGCAGAGGCCACTGAGTaGGAGCCCTTCTCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: LCGWAHKEANFASSELDSAEATE*EPFSQK
Trigger: TTTCTGGGAGAAGGGCTCCAACTCAGTGGCCTCTGC...TGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp CTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATAACACCACCAGCCAGTaGGCATACTGGGACACACAG +
Preference number: 5 (lower is better)
Translates to: LLCGWAHKEANFASSELDNTTSQ*AYWDTQ
Trigger: CTGTGTGTCCCAGTATGCCAACTGGCTGGTGGTGTT...ATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp CTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCAGACTCGAGAACAGTGTaGGACCTCTCTCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: LCGWAHKEANFASSELDSDSRTV*DLSLQP
Trigger: GGGCTGGAGAGAGAGGTCCAACACTGTTCTCGAGTC...TGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp CCTGCTTCCTCTGCTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCTTCCTCCTGGGGAATTaGTCCGAAGATCTGCAGATA +
Preference number: 5 (lower is better)
Translates to: PASSAVWLGPQRGQLCQLFLLGN*SEDLQI
Trigger: TATCTGCAGATCTTCGGACAAATTCCCCAGGAGGAA...GAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAGCAGAGGAAGCAGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp AACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAGGAGACTCGAGAACAGTGTaGGACCTCTCTCTCCAGCCC +
Preference number: 5 (lower is better)
Translates to: NFASSELDSPKVRLLWEGDSRTV*DLSLQP
Trigger: GGGCTGGAGAGAGAGGTCCAACACTGTTCTCGAGTC...TCCTTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000042194.10
ENSMUST00000209506.2
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp GACCAGCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGAGCACTTGCCCCACATaGGGAGGCCGGAGCTCTACA +
Preference number: 5 (lower is better)
Translates to: DQLSLLPPCYVPTGKQKASTCPT*GGRSST
Trigger: TGTAGAGCTCCGGCCTCCCAATGTGGGGCAAGTGCT...CGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGCTGGTC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CAA 90 bp GCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGGCAGAGGCCACTGAGTaGGAGCCCTTCTCCCAGAAA +
Preference number: 5 (lower is better)
Translates to: ALFITTLLCSHGKAESGRAEATE*EPFSQK
Trigger: TTTCTGGGAGAAGGGCTCCAACTCAGTGGCCTCTGC...CCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CAA 90 bp GCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCTGGGAAGGAGGACCTGCTCCATaGATGCTGCTGTCCATATCA +
Preference number: 5 (lower is better)
Translates to: ANFASSELDSPKVRLLWEGGPAP*MLLSIS
Trigger: TGATATGGACAGCAGCATCAATGGAGCAGGTCCTCC...TTCCCAGAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp TGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACGGAGGACCTGCTCCATaGATGCTGCTGTCCATATCA +
Preference number: 5 (lower is better)
Translates to: CVAGPTKRPTLPAQSLIHGGPAP*MLLSIS
Trigger: TGATATGGACAGCAGCATCAATGGAGCAGGTCCTCC...GTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp GCTCTCTTTATTACCACCCTGTTATGTTCCCACGGGAAAGCAGAAAGCGGCAGGTTGGGCCCCAGCTGCTaGTTCACCGTGAAGATGTGC +
Preference number: 5 (lower is better)
Translates to: ALFITTLLCSHGKAESGRLGPSC*FTVKMC
Trigger: GCACATCTTCACGGTGAACAAGCAGCTGGGGCCCAA...CCTGCCGCTTTCTGCTTTCCCGTGGGAACATAACAGGGTGGTAATAAAGAGAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CAA 90 bp AAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCAACACCACCAGCCAGTaGGCATACTGGGACACACAG +
Preference number: 5 (lower is better)
Translates to: KEANFASSELDSPKVRLLNTTSQ*AYWDTQ
Trigger: CTGTGTGTCCCAGTATGCCAACTGGCTGGTGGTGTT...GAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp CTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCAATGGCGATGAGCAGGTaGAGCAACAGGATATTGGCC +
Preference number: 5 (lower is better)
Translates to: LCGWAHKEANFASSELDSMAMSR*SNRILA
Trigger: GGCCAATATCCTGTTGCTCAACCTGCTCATCGCCAT...TGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS GCA 90 bp GAAGTTCTCTTTGTGCACAGACTCCCAAGTCAGCAGCTTCCGCTCTaGTTCCTTAGAGAGACAGACACGGAAGTGCTCGAAGACTGGGGA +
Preference number: 5 (lower is better)
Translates to: EVLFVHRLPSQQLPL*FLRETDTEVLEDWG
Trigger: TCCCCAGTCTTCGAGCACTTCCGTGTCTGTCTCTCTAAGGAAGCAGAGCGGAAGCTGCTGACTTGGGAGTCTGTGCACAAAGAGAACTTC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp AAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCCTCACTATGACAATCTaGGGCCCCAGCTGCTTGTTC +
Preference number: 5 (lower is better)
Translates to: KEANFASSELDSPKVRLLLTMTI*GPSCLF
Trigger: GAACAAGCAGCTGGGGCCCAAGATTGTCATAGTGAG...GAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp TGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAACAGGAAGTTCTCTTaGTGCACAGACTCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: CGWAHKEANFASSELDSPNRKFS*CTDSQV
Trigger: GACTTGGGAGTCTGTGCACAAAGAGAACTTCCTGTT...GGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS GCA 90 bp GAAGTTCTCTTTGTGCACAGACTCCCAAGTCAGCAGCTTCCGCTCTaGTTCCTTAGAGAGACAGACACCAAGCTCCAGTCTCACGGAAGT +
Preference number: 5 (lower is better)
Translates to: EVLFVHRLPSQQLPL*FLRETDTKLQSHGS
Trigger: ACTTCCGTGAGACTGGAGCTTGGTGTCTGTCTCTCTAAGGAAGCAGAGCGGAAGCTGCTGACTTGGGAGTCTGTGCACAAAGAGAACTTC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210311.2
CDS-3UTR CAA 90 bp CTGTGTGGCTGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCATTCCTCCTGGGGAATTaGTCCGAAGATCTGCAGATA +
Preference number: 5 (lower is better)
Translates to: LCGWAHKEANFASSELDSFLLGN*SEDLQI
Trigger: TATCTGCAGATCTTCGGACAAATTCCCCAGGAGGAA...TGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCAGCCACACAG
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp TGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAACAGGAAGTTCTCTTaGTGCACAGACTCCCAAGTC +
Preference number: 5 (lower is better)
Translates to: WAHKEANFASSELDSPKVNRKFS*CTDSQV
Trigger: GACTTGGGAGTCTGTGCACAAAGAGAACTTCCTGTT...CACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp CACACACCTGCTCCACAGGAGCCAAGCATGTGCGAAAATCCTCATCAAATGGTTACGGAAAAGTTCACTTaGGGCGATGTCCACGCGGTT +
Preference number: 5 (lower is better)
Translates to: HTPAPQEPSMCENPHQMVTEKFT*GDVHAV
Trigger: AACCGCGTGGACATCGCCCAAAGTGAACTTTTCCGT...AACCATTTGATGAGGATTTTCGCACATGCTTGGCTCCTGTGGAGCAGGTGTGTG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CAA 90 bp CACACCTGCTCCACAGGAGCCAAGCATGTGCGAAAATCCTCATCAAATGGTTTTATGGCGATGAGCAGGTaGAGCAACAGGATATTGGCC +
Preference number: 5 (lower is better)
Translates to: HTCSTGAKHVRKSSSNGFMAMSR*SNRILA
Trigger: GGCCAATATCCTGTTGCTCAACCTGCTCATCGCCAT...AAAACCATTTGATGAGGATTTTCGCACATGCTTGGCTCCTGTGGAGCAGGTGTG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS-3UTR CAA 90 bp TGGGCCCACAAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGACATCCTTCATCATTTaGCTCACTATGACAATCTTG +
Preference number: 5 (lower is better)
Translates to: WAHKEANFASSELDSPKVTSFII*LTMTIL
Trigger: CAAGATTGTCATAGTGAGCAAAATGATGAAGGATGT...CACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTTGTGGGCCCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS-3UTR CAA 90 bp AAAGAGGCCAACTTTGCCAGCTCAGAGCTTGATTCACCCAAGGTGAGGCTGCTCACATCCTTCATCATTTaGCTCACTATGACAATCTTG +
Preference number: 5 (lower is better)
Translates to: KEANFASSELDSPKVRLLTSFII*LTMTIL
Trigger: CAAGATTGTCATAGTGAGCAAAATGATGAAGGATGT...GAGCAGCCTCACCTTGGGTGAATCAAGCTCTGAGCTGGCAAAGTTGGCCTCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS TCA 72 bp CCACGTGCCGGCCAATGCCTGTGTGCAGTCCCCCAGTaGCGATCCAGGCCCCTGTGCTCTGGGCGGCTCTCA +
Preference number: 6 (lower is better)
Translates to: PRAGQCLCAVPQ*RSRPLCSGRLS
Trigger: TGAGAGCCGCCCAGAGCACAGGGGCCTGGATCGTCACTGGGGGACTGCACACAGGCATTGGCCGGCACGTGG
68% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS TCA 72 bp CGACACCTGCGCAGCCACTTGATGAGGAGGCGCACATaGGAGATGATGATGAGGGGTGGGGCCAGGGCAGGC +
Preference number: 6 (lower is better)
Translates to: RHLRSHLMRRRT*EMMMRGGARAG
Trigger: GCCTGCCCTGGCCCCACCCCTCATCATCATCTCTCATGTGCGCCTCCTCATCAAGTGGCTGCGCAGGTGTCG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS CCA 72 bp GCTGCCCCAAAGGCATCCTCCACAGCCACAGAAGGGTaGGCATCCCGAGGTTGCCCACACTGGCACAAGGTC +
Preference number: 6 (lower is better)
Translates to: AAPKASSTATEG*ASRGCPHWHKV
Trigger: GACCTTGTGCCAGTGTGGGCAACCTCGGGATGCCCACCCTTCTGTGGCTGTGGAGGATGCCTTTGGGGCAGC
64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000042194.10
CDS CCA 72 bp GCTTCAGTGCAGTGTCCACCGGAAGTGCTCGAAGACTaGGGAGGCGGGCAAGTTAGCCCTGCGACACCTGCG +
Preference number: 6 (lower is better)
Translates to: ASVQCPPEVLED*GGGQVSPATPA
Trigger: CGCAGGTGTCGCAGGGCTAACTTGCCCGCCTCCCCAGTCTTCGAGCACTTCCGGTGGACACTGCACTGAAGC
64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209506.2
CDS CCA 72 bp ACACCAAGCTCCAGTCTCACGGAAGTGCTCGAAGACTaGGGAGGCGGGCAAGTTAGCCCTGCGACACCTGCG +
Preference number: 6 (lower is better)
Translates to: TPSSSLTEVLED*GGGQVSPATPA
Trigger: CGCAGGTGTCGCAGGGCTAACTTGCCCGCCTCCCCAGTCTTCGAGCACTTCCGTGAGACTGGAGCTTGGTGT
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210311.2
CDS CCA 72 bp TTCCTTAGAGAGACAGACACGGAAGTGCTCGAAGACTaGGGAGGCGGGCAAGTTAGCCCTGCGACACCTGCG +
Preference number: 6 (lower is better)
Translates to: FLRETDTEVLED*GGGQVSPATPA
Trigger: CGCAGGTGTCGCAGGGCTAACTTGCCCGCCTCCCCAGTCTTCGAGCACTTCCGTGTCTGTCTCTCTAAGGAA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS GCA 72 bp TTCCGCTCTGCTTCCTTAGAGAGACAGACACGGAAGTaGTCGAAGACTGGGGAGGCGGGCAAGTTAGCCCTG +
Preference number: 6 (lower is better)
Translates to: FRSASLERQTRK*SKTGEAGKLAL
Trigger: CAGGGCTAACTTGCCCGCCTCCCCAGTCTTCGAGCACTTCCGTGTCTGTCTCTCTAAGGAAGCAGAGCGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS GCA 72 bp CCGATCGTACTCTCTGATCTGTCCCAGCTGCTTCAGTaGAGTGTCCACCGGAAGTGCTCGAAGACTGGGGAG +
Preference number: 6 (lower is better)
Translates to: PIVLSDLSQLLQ*SVHRKCSKTGE
Trigger: CTCCCCAGTCTTCGAGCACTTCCGGTGGACACTGCACTGAAGCAGCTGGGACAGATCAGAGAGTACGATCGG
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000209506.2
CDS GCA 72 bp CTCAGACGCCGATCGTACTCTCTGATCTGTCCCAGCTaGTTCAGTGCAGTGTCCACCGGAAGTGCTCGAAGA +
Preference number: 6 (lower is better)
Translates to: LRRRSYSLICPS*FSAVSTGSARR
Trigger: TCTTCGAGCACTTCCGGTGGACACTGCACTGAAGCAGCTGGGACAGATCAGAGAGTACGATCGGCGTCTGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000209506.2
CDS GCA 72 bp TTTGTGCACAGACTCCCAAGTCAGCAGCTTCCGCTCTaGTTCCTTAGAGAGACAGACACGGAAGTGCTCGAA +
Preference number: 6 (lower is better)
Translates to: FVHRLPSQQLPL*FLRETDTEVLE
Trigger: TTCGAGCACTTCCGTGTCTGTCTCTCTAAGGAAGCAGAGCGGAAGCTGCTGACTTGGGAGTCTGTGCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000042194.10
ENSMUST00000211743.2
CDS GCA 72 bp TTTGTGCACAGACTCCCAAGTCAGCAGCTTCCGCTCTaGTTCCTTAGAGAGACAGACACCAAGCTCCAGTCT +
Preference number: 6 (lower is better)
Translates to: FVHRLPSQQLPL*FLRETDTKLQS
Trigger: AGACTGGAGCTTGGTGTCTGTCTCTCTAAGGAAGCAGAGCGGAAGCTGCTGACTTGGGAGTCTGTGCACAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000210311.2