RADAR | Search for sensor designs | Human genes | Mouse genes | Code

Pregenerated sensors for TRPM1 (Mus musculus)

Ensembl gene IDs: ENSMUSG00000030523

Ensembl transcript IDs: ENSMUST00000085222.12, ENSMUST00000177102.8, ENSMUST00000205348.2, ENSMUST00000205684.2, ENSMUST00000205731.2, ENSMUST00000205994.2, ENSMUST00000206049.2, ENSMUST00000206263.2, ENSMUST00000206277.2, ENSMUST00000206314.2, ENSMUST00000206706.2, ENSMUST00000206848.2

Found 606 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).

Type Sensor Details
3UTR CCA 90 bp TGGCTTGGTGTCGTAGGAGACTCGGATGTACTGCAAAAGAAGGGGTaGTGCTCAGCGCGCCCGCGCTTGGCTTCGTGTCCCATGGCTTTA +
Preference number: 1 (lower is better)
Translates to: WLGVVGDSDVLQKKG*CSARPRLASCPMAL
Trigger: TAAAGCCATGGGACACGAAGCCAAGCGCGGGCGCGCTGAGCACCACCCCTTCTTTTGCAGTACATCCGAGTCTCCTACGACACCAAGCCA
59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206049.2
3UTR GCA 90 bp GGCGCTATTGTAGGAAGGAGGGGAGGACAGACATGCTTGACAGGTTaGACTGCCTGGCCCAGTCTTGAGAGGCGATGTGAATGGCTGCAT +
Preference number: 1 (lower is better)
Translates to: GAIVGRRGGQTCLTG*TAWPSLERRCEWLH
Trigger: ATGCAGCCATTCACATCGCCTCTCAAGACTGGGCCAGGCAGTGCAACCTGTCAAGCATGTCTGTCCTCCCCTCCTTCCTACAATAGCGCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR CCA 90 bp GAGCTCCAGCTGCCAGTCCTTCACCATGAGGTGGAGCAGGGAATCTaGCTTGGTGTCGTAGGAGACTCGGATGTACTGCAAAAGAAGGGG +
Preference number: 1 (lower is better)
Translates to: ELQLPVLHHEVEQGI*LGVVGDSDVLQKKG
Trigger: CCCCTTCTTTTGCAGTACATCCGAGTCTCCTACGACACCAAGCCAGATTCCCTGCTCCACCTCATGGTGAAGGACTGGCAGCTGGAGCTC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000206049.2
3UTR CCA 90 bp GTAGGAAGGAGGGGAGGACAGACATGCTTGACAGGTTGCACTGCCTaGCCCAGTCTTGAGAGGCGATGTGAATGGCTGCATGTGAAAGCT +
Preference number: 1 (lower is better)
Translates to: VGRRGGQTCLTGCTA*PSLERRCEWLHVKA
Trigger: AGCTTTCACATGCAGCCATTCACATCGCCTCTCAAGACTGGGCCAGGCAGTGCAACCTGTCAAGCATGTCTGTCCTCCCCTCCTTCCTAC
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR TCA 90 bp GTGGGCCCAGTCTGGTGTTGTATAGCTCCTCCAGCCTCGGGATGGTaGGGAAATGCTGCATGTTCACTCCGTTTTCAATCAGGAGCTTTA +
Preference number: 1 (lower is better)
Translates to: VGPVWCCIAPPASGW*GNAACSLRFQSGAL
Trigger: TAAAGCTCCTGATTGAAAACGGAGTGAACATGCAGCATTTCCTCACCATCCCGAGGCTGGAGGAGCTATACAACACCAGACTGGGCCCAC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
3UTR GCA 90 bp GCCTTTGGCTGGGGGTTCATCATCTTCCATTCCCAGAAGCTTAAGTaGTTTCGGCCTCTTAGGGCCAAACAAGTTGTTGTAGAGAGTCCG +
Preference number: 1 (lower is better)
Translates to: AFGWGFIIFHSQKLK*FRPLRAKQVVVESP
Trigger: CGGACTCTCTACAACAACTTGTTTGGCCCTAAGAGGCCGAAAGCACTTAAGCTTCTGGGAATGGAAGATGATGAACCCCCAGCCAAAGGC
51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
3UTR TCA 90 bp AAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTaGGCTATAGCCCAAGCCTGCTCTAGTGTGGCTTTCATTCTCTTC +
Preference number: 1 (lower is better)
Translates to: KPGTWLYSVSRHSTY*AIAQACSSVAFILF
Trigger: GAAGAGAATGAAAGCCACACTAGAGCAGGCTTGGGCTATAGCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR CCA 90 bp TGTGGAGTGAGAGTGAGGAAGGCTTCCCACAGATCTGACATTTATTaGAGGTTTAACAGGCTGGAGCAAGAAGAAGCAATGTGGCAGGCC +
Preference number: 1 (lower is better)
Translates to: CGVRVRKASHRSDIY*RFNRLEQEEAMWQA
Trigger: GGCCTGCCACATTGCTTCTTCTTGCTCCAGCCTGTTAAACCTCCAATAAATGTCAGATCTGTGGGAAGCCTTCCTCACTCTCACTCCACA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR GCA 90 bp AGTCTGGTGTTGTATAGCTCCTCCAGCCTCGGGATGGTGAGGAAATaGTGCATGTTCACTCCGTTTTCAATCAGGAGCTTTACAAAGTCC +
Preference number: 1 (lower is better)
Translates to: SLVLYSSSSLGMVRK*CMFTPFSIRSFTKS
Trigger: GGACTTTGTAAAGCTCCTGATTGAAAACGGAGTGAACATGCAGCATTTCCTCACCATCCCGAGGCTGGAGGAGCTATACAACACCAGACT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
3UTR CCA 90 bp GGAAGGCTTCCCACAGATCTGACATTTATTGGAGGTTTAACAGGCTaGAGCAAGAAGAAGCAATGTGGCAGGCCAGGAGTTAGCTTTGAT +
Preference number: 1 (lower is better)
Translates to: GRLPTDLTFIGGLTG*SKKKQCGRPGVSFD
Trigger: ATCAAAGCTAACTCCTGGCCTGCCACATTGCTTCTTCTTGCTCCAGCCTGTTAAACCTCCAATAAATGTCAGATCTGTGGGAAGCCTTCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR GCA 90 bp CTGCCACAAACATGTCCTACTTACTTCCATTCCCAGAAGCTTAAGTaGTTTCGGCTGCATAACAAAGAAGCAGGAAAAGAAGTGTCAATA +
Preference number: 1 (lower is better)
Translates to: LPQTCPTYFHSQKLK*FRLHNKEAGKEVSI
Trigger: TATTGACACTTCTTTTCCTGCTTCTTTGTTATGCAGCCGAAAGCACTTAAGCTTCTGGGAATGGAAGTAAGTAGGACATGTTTGTGGCAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR TCA 90 bp TGGGAAACAAACCACATATTTAGAATTCATGCCACAAAACCCTTTTaGAGTGGTAGTGTAGAAAGGAGTGATAGGTGGTTAGCAGTAGCT +
Preference number: 1 (lower is better)
Translates to: WETNHIFRIHATKPF*SGSVERSDRWLAVA
Trigger: AGCTACTGCTAACCACCTATCACTCCTTTCTACACTACCACTTCAAAAGGGTTTTGTGGCATGAATTCTAAATATGTGGTTTGTTTCCCA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR CCA 90 bp TTACATCTACTCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATaGCTCAGTAGTGATGTCAGTACCTTAAGGCCTCTGTCAGACAGT +
Preference number: 1 (lower is better)
Translates to: LHLLYLFNFTVSLSK*LSSDVSTLRPLSDS
Trigger: ACTGTCTGACAGAGGCCTTAAGGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGAGTAGATGTAA
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085222.12
3UTR-3UTR GCA 90 bp GATAGGTGGTTAGCAGTAGCTAGCCTCCGGCTTGGGAGGCTGGAGCCATCATGCGCAGTGGCAAGCATATaGCACAGGGACAACCACTCC +
Preference number: 2 (lower is better)
Translates to: DRWLAVASLRLGRLEPSCAVASI*HRDNHS
Trigger: GGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGC...GCATGATGGCTCCAGCCTCCCAAGCCGGAGGCTAGCTACTGCTAACCACCTATC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR GCA 90 bp TCAGTTTGGGCTGCATCTCGAAGCTTTGGAGGCCTCCGTGCACAGATATCAAGACAAAAGAAGGGGTGGTaGTCAGCGCGCCCGCGCTTG +
Preference number: 2 (lower is better)
Translates to: SVWAASRSFGGLRAQISRQKKGW*SARPRL
Trigger: CAAGCGCGGGCGCGCTGAGCACCACCCCTTCTTTTG...TCTTGATATCTGTGCACGGAGGCCTCCAAAGCTTCGAGATGCAGCCCAAACTGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206049.2
3UTR CAA 90 bp GAAGGTTGCTCTTCTTTACATCCCGCACCAGCAGATGAAGGGTGTTaGGTGGGCCCAGTCTGGTGTTGTATAGCTCCTCCAGCCTCGGGA +
Preference number: 2 (lower is better)
Translates to: EGCSSLHPAPADEGC*VGPVWCCIAPPASG
Trigger: TCCCGAGGCTGGAGGAGCTATACAACACCAGACTGGGCCCACCAAACACCCTTCATCTGCTGGTGCGGGATGTAAAGAAGAGCAACCTTC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
3UTR-3UTR TCA 90 bp GGCTCTCGCTCTCTGTACAAACTGTGGAGTGAGAGTGAGGAAGGCTTCCCACAGGTGAATGGCTGCATGTaGAAGCTAGGAGGCCCTGCA +
Preference number: 2 (lower is better)
Translates to: GSRSLYKLWSESEEGFPQVNGCM*KLGGPA
Trigger: TGCAGGGCCTCCTAGCTTTCACATGCAGCCATTCAC...CTGTGGGAAGCCTTCCTCACTCTCACTCCACAGTTTGTACAGAGAGCGAGAGCC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR-3UTR TCA 90 bp TTGGGCTGCATCTCGAAGCTTTGGAGGCCTCCGTGCACAGATATCAAGAGCTTCGCCAGTCCTTCACCATaGGGTGGAGCAGGGAATCTG +
Preference number: 2 (lower is better)
Translates to: LGCISKLWRPPCTDIKSFASPSP*GGAGNL
Trigger: CAGATTCCCTGCTCCACCTCATGGTGAAGGACTGGC...GAAGCTCTTGATATCTGTGCACGGAGGCCTCCAAAGCTTCGAGATGCAGCCCAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206049.2
3UTR-3UTR CCA 90 bp CACCTGCTTCAGTTTGGGCTGCATCTCGAAGCTTTGGAGGCCTCCGTGCACAGATCCTTCACCATGAGGTaGAGCAGGGAATCTGGCTTG +
Preference number: 2 (lower is better)
Translates to: HLLQFGLHLEALEASVHRSFTMR*SRESGL
Trigger: CAAGCCAGATTCCCTGCTCCACCTCATGGTGAAGGA...TCTGTGCACGGAGGCCTCCAAAGCTTCGAGATGCAGCCCAAACTGAAGCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206049.2
3UTR CAA 90 bp AGCCATCCCAGCGTTTGCCCTGCTAAGTTTCTCTCTGCTGTTTCCTaGACTGGGGAGCATTTTTGGCAGTGGTCAGACCATGTGGGCATG +
Preference number: 2 (lower is better)
Translates to: SHPSVCPAKFLSAVS*TGEHFWQWSDHVGM
Trigger: CATGCCCACATGGTCTGACCACTGCCAAAAATGCTCCCCAGTCAAGGAAACAGCAGAGAGAAACTTAGCAGGGCAAACGCTGGGATGGCT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR TCA 90 bp AAGGCTTCCCACAGATCTGACATTTATTGGAGGTTTAACAGGCTGGAGCAAGAAGGGAGGAGAACGGGCTaGGAGAGCAGAGGCATGGGG +
Preference number: 2 (lower is better)
Translates to: KASHRSDIYWRFNRLEQEGRRTG*ESRGMG
Trigger: CCCCATGCCTCTGCTCTCTCAGCCCGTTCTCCTCCC...TTCTTGCTCCAGCCTGTTAAACCTCCAATAAATGTCAGATCTGTGGGAAGCCTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR-3UTR CCA 90 bp GGCTCTCGCTCTCTGTACAAACTGTGGAGTGAGAGTGAGGAAGGCTTCCCACAGGAGAGGCGATGTGAATaGCTGCATGTGAAAGCTAGG +
Preference number: 2 (lower is better)
Translates to: GSRSLYKLWSESEEGFPQERRCE*LHVKAR
Trigger: CCTAGCTTTCACATGCAGCCATTCACATCGCCTCTC...CTGTGGGAAGCCTTCCTCACTCTCACTCCACAGTTTGTACAGAGAGCGAGAGCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR-3UTR CCA 90 bp CTGCTTCAGTTTGGGCTGCATCTCGAAGCTTTGGAGGCCTCCGTGCACAGATATGTCCCATGGCTTTATTaGAGTAACCCCCACCCTGGA +
Preference number: 2 (lower is better)
Translates to: LLQFGLHLEALEASVHRYVPWLY*SNPHPG
Trigger: TCCAGGGTGGGGGTTACTCCAATAAAGCCATGGGAC...ATATCTGTGCACGGAGGCCTCCAAAGCTTCGAGATGCAGCCCAAACTGAAGCAG
53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000206049.2
3UTR-3UTR TCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTATGGCTCAGGCTAGCCTaGAACCTCCCATGTAGCCAG +
Preference number: 2 (lower is better)
Translates to: AKSAGSLDSDELISFTGLWLRLA*NLPCSQ
Trigger: CTGGCTACATGGGAGGTTTCAGGCTAGCCTGAGCCA...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR-3UTR GCA 90 bp AGATGCTTTTCCTTGTTCCTTGCCTTGGAAGACAACAGGAGCGCCAGTGATCAGACATGCTTGACAGGTTaGACTGCCTGGCCCAGTCTT +
Preference number: 2 (lower is better)
Translates to: RCFSLFLALEDNRSASDQTCLTG*TAWPSL
Trigger: AAGACTGGGCCAGGCAGTGCAACCTGTCAAGCATGT...CTGATCACTGGCGCTCCTGTTGTCTTCCAAGGCAAGGAACAAGGAAAAGCATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR-3UTR GCA 90 bp GGAAGGCTTCCCACAGATCTGACATTTATTGGAGGTTTAACAGGCTGGAGCAAGAGGGGAGGACAGACATaGTTGACAGGTTGCACTGCC +
Preference number: 2 (lower is better)
Translates to: GRLPTDLTFIGGLTGWSKRGGQT*LTGCTA
Trigger: GGCAGTGCAACCTGTCAAGCATGTCTGTCCTCCCCT...CTTGCTCCAGCCTGTTAAACCTCCAATAAATGTCAGATCTGTGGGAAGCCTTCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR-3UTR GCA 90 bp TTTGGGCTGCATCTCGAAGCTTTGGAGGCCTCCGTGCACAGATATCAAGAGCTTGAGACTCGGATGTACTaGAAAAGAAGGGGTGGTGCT +
Preference number: 2 (lower is better)
Translates to: FGLHLEALEASVHRYQELETRMY*KRRGGA
Trigger: AGCACCACCCCTTCTTTTGCAGTACATCCGAGTCTC...AAGCTCTTGATATCTGTGCACGGAGGCCTCCAAAGCTTCGAGATGCAGCCCAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206049.2
3UTR-3UTR CCA 90 bp AGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTGGTCTCCCTCTGCAGTaGCAAGCATATGCCACAGGG +
Preference number: 2 (lower is better)
Translates to: RVKEAMELAQKLQALLVLGLPLQ*QAYATG
Trigger: CCCTGTGGCATATGCTTGCCACTGCAGAGGGAGACC...AAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR CCA 90 bp AGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTCCACTAGGGTGCCGTTaGGTGAGTGATGACCACACG +
Preference number: 2 (lower is better)
Translates to: RVKEAMELAQKLQALLVLPLGCR*VSDDHT
Trigger: CGTGTGGTCATCACTCACCCAACGGCACCCTAGTGG...AAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR GCA 90 bp ATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTGAGGAGGACCCAGGTTCTGCTTGGCAGACATaGAGACATTTGGGGCAGGAA +
Preference number: 2 (lower is better)
Translates to: MELAQKLQALLVLEEDPGSAWQT*RHLGQE
Trigger: TTCCTGCCCCAAATGTCTGCATGTCTGCCAAGCAGA...ACCTGGGTCCTCCTCAAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR CCA 90 bp CATGAGGTACTCCAGCACCAGTCCTATATCAATGAGGCTGATGTGGTAATCAGGCAAGAGCATCCAGCATaGCTTGCTCCAGGGCATTCA +
Preference number: 2 (lower is better)
Translates to: HEVLQHQSYINEADVVIRQEHPA*LAPGHS
Trigger: TGAATGCCCTGGAGCAAGCCATGCTGGATGCTCTTG...CCTGATTACCACATCAGCCTCATTGATATAGGACTGGTGCTGGAGTACCTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
3UTR-3UTR CCA 90 bp ATTTTTGGCAGTGGTCAGACCATGTGGGCATGTCATAGTCCACTAGGGTGCCGTGTAGCTCTCTCTGCTTaGCAGACATGCAGACATTTG +
Preference number: 2 (lower is better)
Translates to: IFGSGQTMWACHSPLGCRVALSA*QTCRHL
Trigger: CAAATGTCTGCATGTCTGCCAAGCAGAGAGAGCTAC...ACGGCACCCTAGTGGACTATGACATGCCCACATGGTCTGACCACTGCCAAAAAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR TCA 90 bp ATTTTTGGCAGTGGTCAGACCATGTGGGCATGTCATAGTCCACTAGGGTGCCGTGCCACAAAACCCTTTTaGAGTGGTAGTGTAGAAAGG +
Preference number: 2 (lower is better)
Translates to: IFGSGQTMWACHSPLGCRATKPF*SGSVER
Trigger: CCTTTCTACACTACCACTTCAAAAGGGTTTTGTGGC...ACGGCACCCTAGTGGACTATGACATGCCCACATGGTCTGACCACTGCCAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR CCA 90 bp GTGGAAACTGCTTCTGTCAACAGAAGTCAGTTGGGAAGGACAGACAGACACAAATCTATTGGGATAGGGTaGGGAAGGCTTGTGTGTGGC +
Preference number: 2 (lower is better)
Translates to: VETASVNRSQLGRTDRHKSIGIG*GRLVCG
Trigger: GCCACACACAAGCCTTCCCCACCCTATCCCAATAGA...TTTGTGTCTGTCTGTCCTTCCCAACTGACTTCTGTTGACAGAAGCAGTTTCCAC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR-3UTR CCA 90 bp ATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTGAGGAGGACCCAGGTGAAAGGAGTGATAGGTaGTTAGCAGTAGCTAGCCTC +
Preference number: 2 (lower is better)
Translates to: MELAQKLQALLVLEEDPGERSDR*LAVASL
Trigger: GAGGCTAGCTACTGCTAACCACCTATCACTCCTTTC...ACCTGGGTCCTCCTCAAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR TCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGCTTGGTTGTACTCTGTaGGCAGGCATTCTACCTACT +
Preference number: 2 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTLGCTL*AGILPT
Trigger: AGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAG...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR-3UTR GCA 90 bp AAAGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCAGCCATCCCAGCGTTTaGCCTGCTAAGTTTCTCTCT +
Preference number: 2 (lower is better)
Translates to: KESKRPWSWLRSYKHFLCSHPSV*PAKFLS
Trigger: AGAGAGAAACTTAGCAGGGCAAACGCTGGGATGGCT...GCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR TCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGCGATGGTCTGGCTGTTaGGTGCTTGGTTTTTGTTTT +
Preference number: 2 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTRWSGC*VLGFCF
Trigger: AAAACAAAAACCAAGCACTCAACAGCCAGACCATCG...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR-3UTR GCA 90 bp GGCAGACATGCAGACATTTGGGGCAGGAAAATATGGGAAACAAACCACATATTTAGGCTGGAGCCATCATaGATGTTTTCCAGGTCTCCC +
Preference number: 2 (lower is better)
Translates to: GRHADIWGRKIWETNHIFRLEPS*MFSRSP
Trigger: GGGAGACCTGGAAAACATGCATGATGGCTCCAGCCT...AAATATGTGGTTTGTTTCCCATATTTTCCTGCCCCAAATGTCTGCATGTCTGCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR CCA 90 bp GTGGAAACTGCTTCTGTCAACAGAAGTCAGTTGGGAAGGACAGACAGACACAAATCTCTGTACAAACTGTaGAGTGAGAGTGAGGAAGGC +
Preference number: 2 (lower is better)
Translates to: VETASVNRSQLGRTDRHKSLYKL*SESEEG
Trigger: GCCTTCCTCACTCTCACTCCACAGTTTGTACAGAGA...TTTGTGTCTGTCTGTCCTTCCCAACTGACTTCTGTTGACAGAAGCAGTTTCCAC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR-3UTR CCA 90 bp AAAGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTGCTGTTTCCTTGACTaGGGAGCATTTTTGGCAGTG +
Preference number: 2 (lower is better)
Translates to: KESKRPWSWLRSYKHFLCCCFLD*GAFLAV
Trigger: CACTGCCAAAAATGCTCCCCAGTCAAGGAAACAGCA...GCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCTTT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR CAA 90 bp AGTCAACGCTTTCATGTGGAAACTGCTTCTGTCAACAGAAGTCAGTaGGGAAGGACAGACAGACACAAAGCCTTCCTTGTAAGTAGAACC +
Preference number: 2 (lower is better)
Translates to: SQRFHVETASVNRSQ*GRTDRHKAFLVSRT
Trigger: GGTTCTACTTACAAGGAAGGCTTTGTGTCTGTCTGTCCTTCCCAACTGACTTCTGTTGACAGAAGCAGTTTCCACATGAAAGCGTTGACT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR-3UTR GCA 90 bp AGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTGTATGTACATGGTGGTaGACATACACATATGCAGGC +
Preference number: 2 (lower is better)
Translates to: RVKEAMELAQKLQALLVLVCTWW*TYTYAG
Trigger: GCCTGCATATGTGTATGTGCACCACCATGTACATAC...AAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR CCA 90 bp AAAGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCAGACATGCAGACATTTaGGGCAGGAAAATATGGGAA +
Preference number: 2 (lower is better)
Translates to: KESKRPWSWLRSYKHFLCRHADI*GRKIWE
Trigger: TTCCCATATTTTCCTGCCCCAAATGTCTGCATGTCT...GCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCTTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR TCA 90 bp CTCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCCTTGGTTGTACTCTGTaGGCAGGCATTCTACCTACT +
Preference number: 2 (lower is better)
Translates to: LYLFNFTVSLSKWLSSDVLGCTL*AGILPT
Trigger: AGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAG...GACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR-3UTR CCA 90 bp GGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTAACTTGATAATGTTTTaGATGGTCAAGATGGCAGCC +
Preference number: 2 (lower is better)
Translates to: GLQLYRCMLQHVSCAASVNLIMF*MVKMAA
Trigger: GGCTGCCATCTTGACCATCCAAAACATTATCAAGTT...AACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCC
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR-3UTR TCA 90 bp CTCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCCGATGGTCTGGCTGTTaGGTGCTTGGTTTTTGTTTT +
Preference number: 2 (lower is better)
Translates to: LYLFNFTVSLSKWLSSDVRWSGC*VLGFCF
Trigger: AAAACAAAAACCAAGCACTCAACAGCCAGACCATCG...GACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR GCA 72 bp GTAGGAGACTCGGATGTACTGCAAAAGAAGGGGTGGTaGTCAGCGCGCCCGCGCTTGGCTTCGTGTCCCATG +
Preference number: 3 (lower is better)
Translates to: VGDSDVLQKKGW*SARPRLASCPM
Trigger: CATGGGACACGAAGCCAAGCGCGGGCGCGCTGAGCACCACCCCTTCTTTTGCAGTACATCCGAGTCTCCTAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206049.2
3UTR TCA 72 bp AGAGCTTCGGGAGCTCCAGCTGCCAGTCCTTCACCATaGGGTGGAGCAGGGAATCTGGCTTGGTGTCGTAGG +
Preference number: 3 (lower is better)
Translates to: RASGAPAASPSP*GGAGNLAWCRR
Trigger: CCTACGACACCAAGCCAGATTCCCTGCTCCACCTCATGGTGAAGGACTGGCAGCTGGAGCTCCCGAAGCTCT
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206049.2
3UTR GCA 72 bp GTAGCTAGCCTCCGGCTTGGGAGGCTGGAGCCATCATaGATGTTTTCCAGGTCTCCCTCTGCAGTGGCAAGC +
Preference number: 3 (lower is better)
Translates to: VASLRLGRLEPS*MFSRSPSAVAS
Trigger: GCTTGCCACTGCAGAGGGAGACCTGGAAAACATGCATGATGGCTCCAGCCTCCCAAGCCGGAGGCTAGCTAC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR CCA 72 bp CTTGCCTTGGAAGACAACAGGAGCGCCAGTGATCAGTaGGGAGGAGAACGGGCTGAGAGAGCAGAGGCATGG +
Preference number: 3 (lower is better)
Translates to: LALEDNRSASDQ*GGERAERAEAW
Trigger: CCATGCCTCTGCTCTCTCAGCCCGTTCTCCTCCCCACTGATCACTGGCGCTCCTGTTGTCTTCCAAGGCAAG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR CCA 72 bp TGCAAAAGAAGGGGTGGTGCTCAGCGCGCCCGCGCTTaGCTTCGTGTCCCATGGCTTTATTGGAGTAACCCC +
Preference number: 3 (lower is better)
Translates to: CKRRGGAQRARA*LRVPWLYWSNP
Trigger: GGGGTTACTCCAATAAAGCCATGGGACACGAAGCCAAGCGCGGGCGCGCTGAGCACCACCCCTTCTTTTGCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000206049.2
3UTR TCA 72 bp GGGTGGGGAAGGCTTGTGTGTGGCAGCTGGCCTGGATaGCTCCGATGTACAGTGAGGTTGGCTATGGTTGAA +
Preference number: 3 (lower is better)
Translates to: GWGRLVCGSWPG*LRCTVRLAMVE
Trigger: TTCAACCATAGCCAACCTCACTGTACATCGGAGTCATCCAGGCCAGCTGCCACACACAAGCCTTCCCCACCC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR GCA 72 bp GTAGGAAGGAGGGGAGGACAGACATGCTTGACAGGTTaGACTGCCTGGCCCAGTCTTGAGAGGCGATGTGAA +
Preference number: 3 (lower is better)
Translates to: VGRRGGQTCLTG*TAWPSLERRCE
Trigger: TTCACATCGCCTCTCAAGACTGGGCCAGGCAGTGCAACCTGTCAAGCATGTCTGTCCTCCCCTCCTTCCTAC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR GCA 72 bp AGTTTGGGCTGCATCTCGAAGCTTTGGAGGCCTCCGTaGACAGATATCAAGAGCTTCGGGAGCTCCAGCTGC +
Preference number: 3 (lower is better)
Translates to: SLGCISKLWRPP*TDIKSFGSSSC
Trigger: GCAGCTGGAGCTCCCGAAGCTCTTGATATCTGTGCACGGAGGCCTCCAAAGCTTCGAGATGCAGCCCAAACT
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206049.2
3UTR GCA 72 bp TCCACCCGATCTAGGACAAGAGCATCCAGCATGGCTTaGTCCAGGGCATTCACCCAGTTGAGCAGCTCAAGC +
Preference number: 3 (lower is better)
Translates to: STRSRTRASSMA*SRAFTQLSSSS
Trigger: GCTTGAGCTGCTCAACTGGGTGAATGCCCTGGAGCAAGCCATGCTGGATGCTCTTGTCCTAGATCGGGTGGA
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
3UTR CCA 72 bp GATAGGGTGGGGAAGGCTTGTGTGTGGCAGCTGGCCTaGATGACTCCGATGTACAGTGAGGTTGGCTATGGT +
Preference number: 3 (lower is better)
Translates to: DRVGKACVWQLA*MTPMYSEVGYG
Trigger: ACCATAGCCAACCTCACTGTACATCGGAGTCATCCAGGCCAGCTGCCACACACAAGCCTTCCCCACCCTATC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR CCA 72 bp AGGGTCTATTGGGATAGGGTGGGGAAGGCTTGTGTGTaGCAGCTGGCCTGGATGACTCCGATGTACAGTGAG +
Preference number: 3 (lower is better)
Translates to: RVYWDRVGKACV*QLAWMTPMYSE
Trigger: CTCACTGTACATCGGAGTCATCCAGGCCAGCTGCCACACACAAGCCTTCCCCACCCTATCCCAATAGACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR CCA 72 bp AACACCTGCTTCAGTTTGGGCTGCATCTCGAAGCTTTaGAGGCCTCCGTGCACAGATATCAAGAGCTTCGGG +
Preference number: 3 (lower is better)
Translates to: NTCFSLGCISKL*RPPCTDIKSFG
Trigger: CCCGAAGCTCTTGATATCTGTGCACGGAGGCCTCCAAAGCTTCGAGATGCAGCCCAAACTGAAGCAGGTGTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206049.2
3UTR CCA 72 bp AGCCATCATGCATGTTTTCCAGGTCTCCCTCTGCAGTaGCAAGCATATGCCACAGGGACAACCACTCCTCCT +
Preference number: 3 (lower is better)
Translates to: SHHACFPGLPLQ*QAYATGTTTPP
Trigger: AGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAGACCTGGAAAACATGCATGATGGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR CAA 90 bp TGGGATAGGGTGGGGAAGGCTTGTGTGTGGCAGCTGGCCTGGATGACTCCGATGAAAAGATGCTTTTCCTaGTTCCTTGCCTTGGAAGAC +
Preference number: 3 (lower is better)
Translates to: WDRVGKACVWQLAWMTPMKRCFS*FLALED
Trigger: GTCTTCCAAGGCAAGGAACAAGGAAAAGCATCTTTT...CATCGGAGTCATCCAGGCCAGCTGCCACACACAAGCCTTCCCCACCCTATCCCA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR-3UTR CAA 90 bp CCAAACGAGGCTCTCGCTCTCTGTACAAACTGTGGAGTGAGAGTGAGGAAGGCTCGATGTACAGTGAGGTaGGCTATGGTTGAACAGCGG +
Preference number: 3 (lower is better)
Translates to: PNEALALCTNCGVRVRKARCTVR*AMVEQR
Trigger: CCGCTGTTCAACCATAGCCAACCTCACTGTACATCG...AGCCTTCCTCACTCTCACTCCACAGTTTGTACAGAGAGCGAGAGCCTCGTTTGG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR GCA 72 bp ATGTTTTCCAGGTCTCCCTCTGCAGTGGCAAGCATATaGCACAGGGACAACCACTCCTCCTTACGAAACAGC +
Preference number: 3 (lower is better)
Translates to: MFSRSPSAVASI*HRDNHSSLRNS
Trigger: GCTGTTTCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAGACCTGGAAAACAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR CAA 90 bp ATGTGGAAACTGCTTCTGTCAACAGAAGTCAGTTGGGAAGGACAGACAGACACACTGCCTGGCCCAGTCTaGAGAGGCGATGTGAATGGC +
Preference number: 3 (lower is better)
Translates to: MWKLLLSTEVSWEGQTDTLPGPV*RGDVNG
Trigger: GCCATTCACATCGCCTCTCAAGACTGGGCCAGGCAG...TGTGTCTGTCTGTCCTTCCCAACTGACTTCTGTTGACAGAAGCAGTTTCCACAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR-3UTR CAA 90 bp ATGTGGAAACTGCTTCTGTCAACAGAAGTCAGTTGGGAAGGACAGACAGACACAGACATGCTTGACAGGTaGCACTGCCTGGCCCAGTCT +
Preference number: 3 (lower is better)
Translates to: MWKLLLSTEVSWEGQTDTDMLDR*HCLAQS
Trigger: AGACTGGGCCAGGCAGTGCAACCTGTCAAGCATGTC...TGTGTCTGTCTGTCCTTCCCAACTGACTTCTGTTGACAGAAGCAGTTTCCACAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR-3UTR CAA 90 bp AGCTTTGATTTTGATGGAGGAATAGGGTCTATTGGGATAGGGTGGGGAAGGCTTGGAGGACAGACATGCTaGACAGGTTGCACTGCCTGG +
Preference number: 3 (lower is better)
Translates to: SFDFDGGIGSIGIGWGRLGGQTC*TGCTAW
Trigger: CCAGGCAGTGCAACCTGTCAAGCATGTCTGTCCTCC...AAGCCTTCCCCACCCTATCCCAATAGACCCTATTCCTCCATCAAAATCAAAGCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR-3UTR CAA 90 bp ATTTATTGGAGGTTTAACAGGCTGGAGCAAGAAGAAGCAATGTGGCAGGCCAGGTCCTTGTTCCTTGCCTaGGAAGACAACAGGAGCGCC +
Preference number: 3 (lower is better)
Translates to: IYWRFNRLEQEEAMWQARSLFLA*EDNRSA
Trigger: GGCGCTCCTGTTGTCTTCCAAGGCAAGGAACAAGGA...CCTGGCCTGCCACATTGCTTCTTCTTGCTCCAGCCTGTTAAACCTCCAATAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR-3UTR CAA 90 bp ACTTGGGAGGCAGAGGCAGGCGAATTTCTGAGTTTGAGGCCAACATGGTCTACACAGACATGCAGACATTaGGGGCAGGAAAATATGGGA +
Preference number: 3 (lower is better)
Translates to: TWEAEAGEFLSLRPTWSTQTCRH*GQENMG
Trigger: TCCCATATTTTCCTGCCCCAAATGTCTGCATGTCTG...TGTAGACCATGTTGGCCTCAAACTCAGAAATTCGCCTGCCTCTGCCTCCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR CAA 90 bp ACTTGGGAGGCAGAGGCAGGCGAATTTCTGAGTTTGAGGCCAACATGGTCTACAAAAGAGGCCATGGAGTaGGCTCAGAAGTTACAAGCA +
Preference number: 3 (lower is better)
Translates to: TWEAEAGEFLSLRPTWSTKEAME*AQKLQA
Trigger: TGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTT...TGTAGACCATGTTGGCCTCAAACTCAGAAATTCGCCTGCCTCTGCCTCCCAAGT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR TCA 72 bp ACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTaGGCTATAGCCCAAGCCTGCTCTAGTGTGGCTTTC +
Preference number: 3 (lower is better)
Translates to: TWLYSVSRHSTY*AIAQACSSVAF
Trigger: GAAAGCCACACTAGAGCAGGCTTGGGCTATAGCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR TCA 72 bp TGGATGACTCCGATGTACAGTGAGGTTGGCTATGGTTaGACAGCGGGGAGCCCTAAACTTTTGTGGGCAAAA +
Preference number: 3 (lower is better)
Translates to: WMTPMYSEVGYG*TAGSPKLLWAK
Trigger: TTTTGCCCACAAAAGTTTAGGGCTCCCCGCTGTTCAACCATAGCCAACCTCACTGTACATCGGAGTCATCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR TCA 72 bp GTCTGGTGTTGTATAGCTCCTCCAGCCTCGGGATGGTaGGGAAATGCTGCATGTTCACTCCGTTTTCAATCA +
Preference number: 3 (lower is better)
Translates to: VWCCIAPPASGW*GNAACSLRFQS
Trigger: TGATTGAAAACGGAGTGAACATGCAGCATTTCCTCACCATCCCGAGGCTGGAGGAGCTATACAACACCAGAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
3UTR CCA 72 bp CCCACAGATCTGACATTTATTGGAGGTTTAACAGGCTaGAGCAAGAAGAAGCAATGTGGCAGGCCAGGAGTT +
Preference number: 3 (lower is better)
Translates to: PTDLTFIGGLTG*SKKKQCGRPGV
Trigger: AACTCCTGGCCTGCCACATTGCTTCTTCTTGCTCCAGCCTGTTAAACCTCCAATAAATGTCAGATCTGTGGG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR CCA 72 bp CAGTCCTATATCAATGAGGCTGATGTGGTAATCAGGTaGAAGGTTGCTCTTCTTTACATCCCGCACCAGCAG +
Preference number: 3 (lower is better)
Translates to: QSYINEADVVIR*KVALLYIPHQQ
Trigger: CTGCTGGTGCGGGATGTAAAGAAGAGCAACCTTCCACCTGATTACCACATCAGCCTCATTGATATAGGACTG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
3UTR-3UTR CAA 90 bp AAAGCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCAAGCCAGGGACTTGGTaGTACTCTGTGAGCAGGCAT +
Preference number: 3 (lower is better)
Translates to: KAKSAGSLDSDELISFTGKPGTW*YSVSRH
Trigger: ATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTT...GCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR-3UTR CAA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCTCGATGGTCTGGCTGTaGAGTGCTTGGTTTTTGTTT +
Preference number: 3 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEASMVWL*SAWFLF
Trigger: AAACAAAAACCAAGCACTCAACAGCCAGACCATCGA...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR CCA 72 bp AGAGTGAGGAAGGCTTCCCACAGATCTGACATTTATTaGAGGTTTAACAGGCTGGAGCAAGAAGAAGCAATG +
Preference number: 3 (lower is better)
Translates to: RVRKASHRSDIY*RFNRLEQEEAM
Trigger: CATTGCTTCTTCTTGCTCCAGCCTGTTAAACCTCCAATAAATGTCAGATCTGTGGGAAGCCTTCCTCACTCT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR CCA 72 bp GTTCTGGTCATTTACTCAGTAGTAGCTCTCTCTGCTTaGCAGACATGCAGACATTTGGGGCAGGAAAATATG +
Preference number: 3 (lower is better)
Translates to: VLVIYSVVALSA*QTCRHLGQENM
Trigger: CATATTTTCCTGCCCCAAATGTCTGCATGTCTGCCAAGCAGAGAGAGCTACTACTGAGTAAATGACCAGAAC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR CCA 72 bp CGACAACAACAAAAAGAGTCAAAGAGGCCATGGAGTTaGCTCAGAAGTTACAAGCACTTCTTGTGCTTGAGG +
Preference number: 3 (lower is better)
Translates to: RQQQKESKRPWS*LRSYKHFLCLR
Trigger: CCTCAAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCTTTTTGTTGTTGTCG
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR CAA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGCTGGCTGTTGAGTGCTaGGTTTTTGTTTTAATCAAA +
Preference number: 3 (lower is better)
Translates to: LLSAGITTVQVYAATRFMLAVEC*VFVLIK
Trigger: TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAG...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR-3UTR CAA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGCTGGCTGTTGAGTGCTaGGTTTTTGTTTTAATCAAA +
Preference number: 3 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTLAVEC*VFVLIK
Trigger: TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAG...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR-3UTR CAA 90 bp CTCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCTTTGAAGCCAGGGACTaGGTTGTACTCTGTGAGCAG +
Preference number: 3 (lower is better)
Translates to: LYLFNFTVSLSKWLSSDVFEARD*VVLCEQ
Trigger: CTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAA...GACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR CCA 72 bp CTTGGCAGACATGCAGACATTTGGGGCAGGAAAATATaGGAAACAAACCACATATTTAGAATTCATGCCACA +
Preference number: 3 (lower is better)
Translates to: LGRHADIWGRKI*ETNHIFRIHAT
Trigger: TGTGGCATGAATTCTAAATATGTGGTTTGTTTCCCATATTTTCCTGCCCCAAATGTCTGCATGTCTGCCAAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
3UTR-3UTR CAA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCATCGATGGTCTGGCTGTaGAGTGCTTGGTTTTTGTTT +
Preference number: 3 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSSMVWL*SAWFLF
Trigger: AAACAAAAACCAAGCACTCAACAGCCAGACCATCGA...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR-3UTR CAA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCAAACTTGATAATGTTTaGGATGGTCAAGATGGCAGC +
Preference number: 3 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTKLDNV*DGQDGS
Trigger: GCTGCCATCTTGACCATCCAAAACATTATCAAGTTT...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR TCA 72 bp AACCACATATTTAGAATTCATGCCACAAAACCCTTTTaGAGTGGTAGTGTAGAAAGGAGTGATAGGTGGTTA +
Preference number: 3 (lower is better)
Translates to: NHIFRIHATKPF*SGSVERSDRWL
Trigger: TAACCACCTATCACTCCTTTCTACACTACCACTTCAAAAGGGTTTTGTGGCATGAATTCTAAATATGTGGTT
38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp GGGCTGAGAGAGCAGAGGCATGGGGCCCAGAGGGGGCGCTATTGTAGGAAGGAGTGCTCACACCCCCGGTaGAGATCCACGCCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: GLREQRHGAQRGRYCRKECSHPR*RSTPPW
Trigger: CCACGGGGGCGTGGATCTTCACCGGGGGTGTGAGCA...CTCCTTCCTACAATAGCGCCCCCTCTGGGCCCCATGCCTCTGCTCTCTCAGCCC
67% GC, longest homopolymer 5 nt, total homopolymer stretches 19 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp GGCTTGCTCCAGGGCATTCACCCAGTTGAGCAGCTCAAGCTTCCGGGGGTCCGTCCTCTCCTGTTGTGCTaGGAGCCCCACTCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: GLLQGIHPVEQLKLPGVRPLLLC*EPHSAE
Trigger: CTCTGCCGAGTGGGGCTCCCAGCACAACAGGAGAGG...ACGGACCCCCGGAAGCTTGAGCTGCTCAACTGGGTGAATGCCCTGGAGCAAGCC
63% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR TCA 90 bp GGGCTGAGAGAGCAGAGGCATGGGGCCCAGAGGGGGCGCTATTGTAGGAAGGAGAGGGCCAAGCTCAGCTaGTCTGGAGCTGATGCGTTG +
Preference number: 4 (lower is better)
Translates to: GLREQRHGAQRGRYCRKERAKLS*SGADAL
Trigger: CAACGCATCAGCTCCAGATCAGCTGAGCTTGGCCCT...CTCCTTCCTACAATAGCGCCCCCTCTGGGCCCCATGCCTCTGCTCTCTCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR GCA 90 bp GGGCTGAGAGAGCAGAGGCATGGGGCCCAGAGGGGGCGCTATTGTAGGAAGGAGGCATCCAGCATGGCTTaGTCCAGGGCATTCACCCAG +
Preference number: 4 (lower is better)
Translates to: GLREQRHGAQRGRYCRKEASSMA*SRAFTQ
Trigger: CTGGGTGAATGCCCTGGAGCAAGCCATGCTGGATGC...CTCCTTCCTACAATAGCGCCCCCTCTGGGCCCCATGCCTCTGCTCTCTCAGCCC
62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR TCA 90 bp AGGGTGGGGAAGGCTTGTGTGTGGCAGCTGGCCTGGATGACTCCGATGTACAGTGGTAGGCACCGCCCATaGGGTACTCCAGCACCAGTC +
Preference number: 4 (lower is better)
Translates to: RVGKACVWQLAWMTPMYSGRHRP*GTPAPV
Trigger: GACTGGTGCTGGAGTACCTCATGGGCGGTGCCTACC...ACTGTACATCGGAGTCATCCAGGCCAGCTGCCACACACAAGCCTTCCCCACCCT
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR TCA 90 bp TTGTATAGCTCCTCCAGCCTCGGGATGGTGAGGAAATGCTGCATGTTCACTCCGTGCTCACACCCCCGGTaGAGATCCACGCCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LYSSSSLGMVRKCCMFTPCSHPR*RSTPPW
Trigger: CCACGGGGGCGTGGATCTTCACCGGGGGTGTGAGCA...CGGAGTGAACATGCAGCATTTCCTCACCATCCCGAGGCTGGAGGAGCTATACAA
60% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR TCA 90 bp CATGTTTTCCAGGTCTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCATGCTCACACCCCCGGTaGAGATCCACGCCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: HVFQVSLCSGKHMPQGQPCSHPR*RSTPPW
Trigger: CCACGGGGGCGTGGATCTTCACCGGGGGTGTGAGCA...TGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAGACCTGGAAAACATG
60% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp TGGGATAGGGTGGGGAAGGCTTGTGTGTGGCAGCTGGCCTGGATGACTCCGATGAGGGCAGAGGTGGGGTaGTGTCAGTTTGGGACAGGT +
Preference number: 4 (lower is better)
Translates to: WDRVGKACVWQLAWMTPMRAEVG*CQFGTG
Trigger: ACCTGTCCCAAACTGACATCACCCCACCTCTGCCCT...CATCGGAGTCATCCAGGCCAGCTGCCACACACAAGCCTTCCCCACCCTATCCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR GCA 90 bp GATAGGGTGGGGAAGGCTTGTGTGTGGCAGCTGGCCTGGATGACTCCGATGTACCAGAGGCACGTCCACTaGCATCGCAAACCACCACAG +
Preference number: 4 (lower is better)
Translates to: DRVGKACVWQLAWMTPMYQRHVH*HRKPPQ
Trigger: CTGTGGTGGTTTGCGATGGCAGTGGACGTGCCTCTG...GTACATCGGAGTCATCCAGGCCAGCTGCCACACACAAGCCTTCCCCACCCTATC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp TCCAGGGCATTCACCCAGTTGAGCAGCTCAAGCTTCCGGGGGTCCGTCTCTTCCACGACAGGTACACCCTaGCCCAGCCTTGTGTTGATC +
Preference number: 4 (lower is better)
Translates to: SRAFTQLSSSSFRGSVSSTTGTP*PSLVLI
Trigger: GATCAACACAAGGCTGGGCCAGGGTGTACCTGTCGT...GGAAGAGACGGACCCCCGGAAGCTTGAGCTGCTCAACTGGGTGAATGCCCTGGA
59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CCA 90 bp GCTTGGGAGGCTGGAGCCATCATGCATGTTTTCCAGGTCTCCCTCTGCAGTGGCCAGTGGCGGCCAGTGTaGGCCAAAGACGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: AWEAGAIMHVFQVSLCSGQWRPV*AKDEDL
Trigger: CAGATCTTCGTCTTTGGCCCACACTGGCCGCCACTG...GCCACTGCAGAGGGAGACCTGGAAAACATGCATGATGGCTCCAGCCTCCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp TCCAGGGCATTCACCCAGTTGAGCAGCTCAAGCTTCCGGGGGTCCGTCTCTTCCTCTGGGTGTGTTTGCTaGCAGACCATTTCCCGGACT +
Preference number: 4 (lower is better)
Translates to: SRAFTQLSSSSFRGSVSSSGCVC*QTISRT
Trigger: AGTCCGGGAAATGGTCTGTCAGCAAACACACCCAGA...GGAAGAGACGGACCCCCGGAAGCTTGAGCTGCTCAACTGGGTGAATGCCCTGGA
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR TCA 90 bp AACGGGCTGAGAGAGCAGAGGCATGGGGCCCAGAGGGGGCGCTATTGTAGGAAGTGGTCATGGCAGCCTTaGTCAGACCTTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: NGLREQRHGAQRGRYCRKWSWQP*SDLSQT
Trigger: TGTTTGGGAAAGGTCTGATCAAGGCTGCCATGACCA...CTTCCTACAATAGCGCCCCCTCTGGGCCCCATGCCTCTGCTCTCTCAGCCCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR TCA 90 bp AACGGGCTGAGAGAGCAGAGGCATGGGGCCCAGAGGGGGCGCTATTGTAGGAAGTTGGGACAGGTGAGGTaGAGAGTTGCATTCTGCACA +
Preference number: 4 (lower is better)
Translates to: NGLREQRHGAQRGRYCRKLGQVR*RVAFCT
Trigger: TGTGCAGAATGCAACTCTTCACCTCACCTGTCCCAA...CTTCCTACAATAGCGCCCCCTCTGGGCCCCATGCCTCTGCTCTCTCAGCCCGTT
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR TCA 90 bp GGGCTGAGAGAGCAGAGGCATGGGGCCCAGAGGGGGCGCTATTGTAGGAAGGAGTCAGTTTGGGACAGGTaGGGTGAAGAGTTGCATTCT +
Preference number: 4 (lower is better)
Translates to: GLREQRHGAQRGRYCRKESVWDR*GEELHS
Trigger: AGAATGCAACTCTTCACCTCACCTGTCCCAAACTGA...CTCCTTCCTACAATAGCGCCCCCTCTGGGCCCCATGCCTCTGCTCTCTCAGCCC
58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR GCA 90 bp TTTGGTGGGCCCAGTCTGGTGTTGTATAGCTCCTCCAGCCTCGGGATGGTGAGGGACTGCGTGTCTGCCTaGTTGGTGTCCTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: FGGPSLVLYSSSSLGMVRDCVSA*LVSSPV
Trigger: AACAGGAGAGGACACCAAGCAGGCAGACACGCAGTC...CCTCACCATCCCGAGGCTGGAGGAGCTATACAACACCAGACTGGGCCCACCAAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR GCA 90 bp AGAGCATCCAGCATGGCTTGCTCCAGGGCATTCACCCAGTTGAGCAGCTCAAGCTTCGGGAGCTCCAGCTaGCAGTCCTTCACCATGAGG +
Preference number: 4 (lower is better)
Translates to: RASSMACSRAFTQLSSSSFGSSS*QSFTMR
Trigger: CCTCATGGTGAAGGACTGGCAGCTGGAGCTCCCGAA...GCTTGAGCTGCTCAACTGGGTGAATGCCCTGGAGCAAGCCATGCTGGATGCTCT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CCA 90 bp ACTTGGGAGGCAGAGGCAGGCGAATTTCTGAGTTTGAGGCCAACATGGTCTACAGGCCAGGCTTCCCAGTaGCGGCCAGTGTGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: TWEAEAGEFLSLRPTWSTGQASQ*RPVWAK
Trigger: TTTGGCCCACACTGGCCGCCACTGGGAAGCCTGGCC...TGTAGACCATGTTGGCCTCAAACTCAGAAATTCGCCTGCCTCTGCCTCCCAAGT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp GATAGGTGGTTAGCAGTAGCTAGCCTCCGGCTTGGGAGGCTGGAGCCATCATGCCTCTCCCCTTGGTGGTaGCTGTGGGTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: DRWLAVASLRLGRLEPSCLSPWW*LWVASF
Trigger: AAAAGAAGCCACCCACAGCCACCACCAAGGGGAGAG...GCATGATGGCTCCAGCCTCCCAAGCCGGAGGCTAGCTACTGCTAACCACCTATC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp TGGGATAGGGTGGGGAAGGCTTGTGTGTGGCAGCTGGCCTGGATGACTCCGATGCAAGAGCATCCAGCATaGCTTGCTCCAGGGCATTCA +
Preference number: 4 (lower is better)
Translates to: WDRVGKACVWQLAWMTPMQEHPA*LAPGHS
Trigger: TGAATGCCCTGGAGCAAGCCATGCTGGATGCTCTTG...CATCGGAGTCATCCAGGCCAGCTGCCACACACAAGCCTTCCCCACCCTATCCCA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGCCTGGCGTGGCAGGTaGGCTGGGGCCAGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: AKSAGSLDSDELISFTGLAWRGR*AGARGV
Trigger: CACACCCCTGGCCCCAGCCCACCTGCCACGCCAGGC...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTGCTCACACCCCCGGTaGAGATCCACGCCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTCSHPR*RSTPPW
Trigger: CCACGGGGGCGTGGATCTTCACCGGGGGTGTGAGCA...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTCACACCCCCGGTaGAGATCCACGCCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMCSHPR*RSTPPW
Trigger: CCACGGGGGCGTGGATCTTCACCGGGGGTGTGAGCA...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
57% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp GGCTCTCGCTCTCTGTACAAACTGTGGAGTGAGAGTGAGGAAGGCTTCCCACAGGCCGGCCTCTGGACTTaGAGGAGTGGTCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: GSRSLYKLWSESEEGFPQAGLWT*RSGLSR
Trigger: CCTTGAAAGACCACTCCTCCAAGTCCAGAGGCCGGC...CTGTGGGAAGCCTTCCTCACTCTCACTCCACAGTTTGTACAGAGAGCGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp CTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCACTCCTCCTTACGAAGCCGGCCTCTGGACTTaGAGGAGTGGTCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: LPLQWQAYATGTTTPPYEAGLWT*RSGLSR
Trigger: CCTTGAAAGACCACTCCTCCAAGTCCAGAGGCCGGC...TTCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp TCCAGGGCATTCACCCAGTTGAGCAGCTCAAGCTTCCGGGGGTCCGTCTCTTCCATGGTAACTAGAAGCTaGTCCCGCAGGGACTCGTTT +
Preference number: 4 (lower is better)
Translates to: SRAFTQLSSSSFRGSVSSMVTRS*SRRDSF
Trigger: AAACGAGTCCCTGCGGGACCAGCTTCTAGTTACCAT...GGAAGAGACGGACCCCCGGAAGCTTGAGCTGCTCAACTGGGTGAATGCCCTGGA
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CCA 90 bp CTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCACTCCTCCTTACGAACCTTCTCTGTGGCTTTaGTGTCCACAGGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LPLQWQAYATGTTTPPYEPSLWL*CPQEGP
Trigger: TGGCCCCTCCTGTGGACACCAAAGCCACAGAGAAGG...TTCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAG
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp TTGTATAGCTCCTCCAGCCTCGGGATGGTGAGGAAATGCTGCATGTTCACTCCGCTTTTCCTCTCCCCTTaGTGGTGGCGGCCAGTGTGG +
Preference number: 4 (lower is better)
Translates to: LYSSSSLGMVRKCCMFTPLFLSP*WWRPVW
Trigger: CCACACTGGCCGCCACCACCAAGGGGAGAGGAAAAG...CGGAGTGAACATGCAGCATTTCCTCACCATCCCGAGGCTGGAGGAGCTATACAA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR TCA 90 bp CTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCACTCCTCCTTACGAACCATCCCGGCAGGGATaGAGCAAAGGTAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: LPLQWQAYATGTTTPPYEPSRQG*SKGNKG
Trigger: TCCCTTGTTACCTTTGCTTCATCCCTGCCGGGATGG...TTCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR GCA 90 bp GGCTTGCTCCAGGGCATTCACCCAGTTGAGCAGCTCAAGCTTCCGGGGGTCCGTTGTCTTCTCTATCCATaGTTTCTGACCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: GLLQGIHPVEQLKLPGVRCLLYP*FLTLLG
Trigger: TCCCAGAAGGGTCAGAAAGCATGGATAGAGAAGACA...ACGGACCCCCGGAAGCTTGAGCTGCTCAACTGGGTGAATGCCCTGGAGCAAGCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR GCA 90 bp GGGAGCATTTTTGGCAGTGGTCAGACCATGTGGGCATGTCATAGTCCACTAGGGTTCGGGAGCTCCAGCTaGCAGTCCTTCACCATGAGG +
Preference number: 4 (lower is better)
Translates to: GSIFGSGQTMWACHSPLGFGSSS*QSFTMR
Trigger: CCTCATGGTGAAGGACTGGCAGCTGGAGCTCCCGAA...CCCTAGTGGACTATGACATGCCCACATGGTCTGACCACTGCCAAAAATGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205731.2
CDS-3UTR GCA 90 bp GATAGGTGGTTAGCAGTAGCTAGCCTCCGGCTTGGGAGGCTGGAGCCATCATGCCTTTGGAGGCCTCCGTaGACAGATATCAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: DRWLAVASLRLGRLEPSCLWRPP*TDIKSF
Trigger: GAAGCTCTTGATATCTGTGCACGGAGGCCTCCAAAG...GCATGATGGCTCCAGCCTCCCAAGCCGGAGGCTAGCTACTGCTAACCACCTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR GCA 90 bp CATGTTTTCCAGGTCTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCACAGAGGCACGTCCACTaGCATCGCAAACCACCACAG +
Preference number: 4 (lower is better)
Translates to: HVFQVSLCSGKHMPQGQPQRHVH*HRKPPQ
Trigger: CTGTGGTGGTTTGCGATGGCAGTGGACGTGCCTCTG...TGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAGACCTGGAAAACATG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp TTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTGAGCCCTCTCCTGTTGTGCTaGGAGCCCCACTCGGCAGAG +
Preference number: 4 (lower is better)
Translates to: FEARDLVVLCEQAFYLLSPLLLC*EPHSAE
Trigger: CTCTGCCGAGTGGGGCTCCCAGCACAACAGGAGAGG...GCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085222.12
CDS-3UTR CCA 90 bp CTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCACTCCTCCTTACGAACTGGACTTGGAGGAGTaGTCTTTCAAGGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: LPLQWQAYATGTTTPPYELDLEE*SFKASP
Trigger: GGGGGATGCCTTGAAAGACCACTCCTCCAAGTCCAG...TTCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAG
56% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp TTGTATAGCTCCTCCAGCCTCGGGATGGTGAGGAAATGCTGCATGTTCACTCCGGCCGGCCTCTGGACTTaGAGGAGTGGTCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: LYSSSSLGMVRKCCMFTPAGLWT*RSGLSR
Trigger: CCTTGAAAGACCACTCCTCCAAGTCCAGAGGCCGGC...CGGAGTGAACATGCAGCATTTCCTCACCATCCCGAGGCTGGAGGAGCTATACAA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CCA 90 bp GATAGGTGGTTAGCAGTAGCTAGCCTCCGGCTTGGGAGGCTGGAGCCATCATGCGCTTGCTCAGAGGGTTaGACATGGTCTGATAGACTC +
Preference number: 4 (lower is better)
Translates to: DRWLAVASLRLGRLEPSCACSEG*TWSDRL
Trigger: GAGTCTATCAGACCATGTCCAACCCTCTGAGCAAGC...GCATGATGGCTCCAGCCTCCCAAGCCGGAGGCTAGCTACTGCTAACCACCTATC
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp CTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCACTCCTCCTTACGAAACGACAGGTACACCCTaGCCCAGCCTTGTGTTGATC +
Preference number: 4 (lower is better)
Translates to: LPLQWQAYATGTTTPPYETTGTP*PSLVLI
Trigger: GATCAACACAAGGCTGGGCCAGGGTGTACCTGTCGT...TTCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGGGCCAGGCTTCCCAGTaGCGGCCAGTGTGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTGQASQ*RPVWAK
Trigger: TTTGGCCCACACTGGCCGCCACTGGGAAGCCTGGCC...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TCTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCACTCCTCCTTACGACTCTCCCCTTGGTGGTaGCTGTGGGTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: SPSAVASICHRDNHSSLRLSPWW*LWVASF
Trigger: AAAAGAAGCCACCCACAGCCACCACCAAGGGGAGAG...TCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAGA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp GGGAGCATTTTTGGCAGTGGTCAGACCATGTGGGCATGTCATAGTCCACTAGGGTTCCTCTCCCCTTGGTaGTGGCTGTGGGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: GSIFGSGQTMWACHSPLGFLSPW*WLWVAS
Trigger: AGAAGCCACCCACAGCCACCACCAAGGGGAGAGGAA...CCCTAGTGGACTATGACATGCCCACATGGTCTGACCACTGCCAAAAATGCTCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp ACTTGGGAGGCAGAGGCAGGCGAATTTCTGAGTTTGAGGCCAACATGGTCTACAAGGGCCAAGCTCAGCTaGTCTGGAGCTGATGCGTTG +
Preference number: 4 (lower is better)
Translates to: TWEAEAGEFLSLRPTWSTRAKLS*SGADAL
Trigger: CAACGCATCAGCTCCAGATCAGCTGAGCTTGGCCCT...TGTAGACCATGTTGGCCTCAAACTCAGAAATTCGCCTGCCTCTGCCTCCCAAGT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR GCA 90 bp AAGCTTAAGTGCTTTCGGCCTCTTAGGGCCAAACAAGTTGTTGTAGAGAGTCCGCCCGGACTGCGTGTCTaGCTGCTTGGTGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: KLKCFRPLRAKQVVVESPPGLRV*LLGVLS
Trigger: GGAGAGGACACCAAGCAGGCAGACACGCAGTCCGGG...CGGACTCTCTACAACAACTTGTTTGGCCCTAAGAGGCCGAAAGCACTTAAGCTT
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR GCA 90 bp TTTTCCTTGTTCCTTGCCTTGGAAGACAACAGGAGCGCCAGTGATCAGTGGGGATTCGGGAGCTCCAGCTaGCAGTCCTTCACCATGAGG +
Preference number: 4 (lower is better)
Translates to: FSLFLALEDNRSASDQWGFGSSS*QSFTMR
Trigger: CCTCATGGTGAAGGACTGGCAGCTGGAGCTCCCGAA...TCCCCACTGATCACTGGCGCTCCTGTTGTCTTCCAAGGCAAGGAACAAGGAAAA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR GCA 90 bp TCCTCCAGCCTCGGGATGGTGAGGAAATGCTGCATGTTCACTCCGTTTTCAATCCAGAGGCACGTCCACTaGCATCGCAAACCACCACAG +
Preference number: 4 (lower is better)
Translates to: SSSLGMVRKCCMFTPFSIQRHVH*HRKPPQ
Trigger: CTGTGGTGGTTTGCGATGGCAGTGGACGTGCCTCTG...GATTGAAAACGGAGTGAACATGCAGCATTTCCTCACCATCCCGAGGCTGGAGGA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR GCA 90 bp GATAGGGTGGGGAAGGCTTGTGTGTGGCAGCTGGCCTGGATGACTCCGATGTACGGGATGGTGAGGAAATaGTGCATGTTCACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: DRVGKACVWQLAWMTPMYGMVRK*CMFTPF
Trigger: AAACGGAGTGAACATGCAGCATTTCCTCACCATCCC...GTACATCGGAGTCATCCAGGCCAGCTGCCACACACAAGCCTTCCCCACCCTATC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp CCAAACGAGGCTCTCGCTCTCTGTACAAACTGTGGAGTGAGAGTGAGGAAGGCTACGACAGGTACACCCTaGCCCAGCCTTGTGTTGATC +
Preference number: 4 (lower is better)
Translates to: PNEALALCTNCGVRVRKATTGTP*PSLVLI
Trigger: GATCAACACAAGGCTGGGCCAGGGTGTACCTGTCGT...AGCCTTCCTCACTCTCACTCCACAGTTTGTACAGAGAGCGAGAGCCTCGTTTGG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp AGCTTTGATTTTGATGGAGGAATAGGGTCTATTGGGATAGGGTGGGGAAGGCTTGGCCAGGCTTCCCAGTaGCGGCCAGTGTGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: SFDFDGGIGSIGIGWGRLGQASQ*RPVWAK
Trigger: TTTGGCCCACACTGGCCGCCACTGGGAAGCCTGGCC...AAGCCTTCCCCACCCTATCCCAATAGACCCTATTCCTCCATCAAAATCAAAGCT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp ACTTGGGAGGCAGAGGCAGGCGAATTTCTGAGTTTGAGGCCAACATGGTCTACACCTTCTCTGTGGCTTTaGTGTCCACAGGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: TWEAEAGEFLSLRPTWSTPSLWL*CPQEGP
Trigger: TGGCCCCTCCTGTGGACACCAAAGCCACAGAGAAGG...TGTAGACCATGTTGGCCTCAAACTCAGAAATTCGCCTGCCTCTGCCTCCCAAGT
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp GCTTGGGAGGCTGGAGCCATCATGCATGTTTTCCAGGTCTCCCTCTGCAGTGGCTCTTTTCCTTCTCTGTaGCTTTGGTGTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: AWEAGAIMHVFQVSLCSGSFPSL*LWCPQE
Trigger: CTCCTGTGGACACCAAAGCCACAGAGAAGGAAAAGA...GCCACTGCAGAGGGAGACCTGGAAAACATGCATGATGGCTCCAGCCTCCCAAGC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp CTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCACTCCTCCTTACGAACCTTGGTGGTGGCTGTaGGTGGCTTCTTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LPLQWQAYATGTTTPPYEPWWWL*VASFPS
Trigger: AGAAGGAAAAGAAGCCACCCACAGCCACCACCAAGG...TTCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp ATTTTTGGCAGTGGTCAGACCATGTGGGCATGTCATAGTCCACTAGGGTGCCGTCTTTTCCTCTCCCCTTaGTGGTGGCTGTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: IFGSGQTMWACHSPLGCRLFLSP*WWLWVA
Trigger: AGCCACCCACAGCCACCACCAAGGGGAGAGGAAAAG...ACGGCACCCTAGTGGACTATGACATGCCCACATGGTCTGACCACTGCCAAAAAT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp AACGGGCTGAGAGAGCAGAGGCATGGGGCCCAGAGGGGGCGCTATTGTAGGAAGGATGTGGTAATCAGGTaGAAGGTTGCTCTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: NGLREQRHGAQRGRYCRKDVVIR*KVALLY
Trigger: GTAAAGAAGAGCAACCTTCCACCTGATTACCACATC...CTTCCTACAATAGCGCCCCCTCTGGGCCCCATGCCTCTGCTCTCTCAGCCCGTT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp TTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTGAGCTGTGGTGCAGGTTGCTaGGCTGGTCCAGGTGCGACT +
Preference number: 4 (lower is better)
Translates to: FEARDLVVLCEQAFYLLSCGAGC*AGPGAT
Trigger: AGTCGCACCTGGACCAGCCCAGCAACCTGCACCACA...GCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp GGCTCTCGCTCTCTGTACAAACTGTGGAGTGAGAGTGAGGAAGGCTTCCCACAGGCACAGGTGGGCTTTTaGGGAAGCACATCAAGGAAC +
Preference number: 4 (lower is better)
Translates to: GSRSLYKLWSESEEGFPQAQVGF*GSTSRN
Trigger: GTTCCTTGATGTGCTTCCCCAAAAGCCCACCTGTGC...CTGTGGGAAGCCTTCCTCACTCTCACTCCACAGTTTGTACAGAGAGCGAGAGCC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp CACCAGTCCTATATCAATGAGGCTGATGTGGTAATCAGGTGGAAGGTTGCTCTTTTCCTCTCCCCTTGGTaGTGGCGGCCAGTGTGGGCC +
Preference number: 4 (lower is better)
Translates to: HQSYINEADVVIRWKVALFLSPW*WRPVWA
Trigger: GGCCCACACTGGCCGCCACCACCAAGGGGAGAGGAA...AAGAGCAACCTTCCACCTGATTACCACATCAGCCTCATTGATATAGGACTGGTG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR TCA 90 bp TTGGCAGACATGCAGACATTTGGGGCAGGAAAATATGGGAAACAAACCACATATTGCTCACACCCCCGGTaGAGATCCACGCCCCCGTGG +
Preference number: 4 (lower is better)
Translates to: LADMQTFGAGKYGKQTTYCSHPR*RSTPPW
Trigger: CCACGGGGGCGTGGATCTTCACCGGGGGTGTGAGCA...ATATGTGGTTTGTTTCCCATATTTTCCTGCCCCAAATGTCTGCATGTCTGCCAA
53% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp TTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTGAGCTGCAGGTGTGAGCAATaGAGTCCCGGTGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: FEARDLVVLCEQAFYLLSCRCEQ*SPGAWL
Trigger: CAGCCAAGCACCGGGACTTCATTGCTCACACCTGCA...GCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCGCCTGTCGGAGACGGTaGGGGCTGAACGGGAGATCT +
Preference number: 4 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEAACRRR*GLNGRS
Trigger: AGATCTCCCGTTCAGCCCTCACCGTCTCCGACAGGC...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp ATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTGAGGAGGACCCAGGTCAGAGGCACGTCCACTaGCATCGCAAACCACCACAG +
Preference number: 4 (lower is better)
Translates to: MELAQKLQALLVLEEDPGQRHVH*HRKPPQ
Trigger: CTGTGGTGGTTTGCGATGGCAGTGGACGTGCCTCTG...ACCTGGGTCCTCCTCAAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCAT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR GCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGGGCTTCTCCTCCGGATaGAAGATGGCTTGCCGAGCC +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMGFSSG*KMACRA
Trigger: GGCTCGGCAAGCCATCTTGCATCCGGAGGAGAAGCC...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp CTGCTAGTGTTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACTCCCGGAAGTGCTCCTaGACGCACTGCTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: LLVFEARDLVVLCEQAFYSRKCS*THCSSN
Trigger: GTTTGAGGAGCAGTGCGTGCAGGAGCACTTCCGGGA...GTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAACACTAGCAG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TCTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCACTCCTCCTTACGAATGGTAACTAGAAGCTaGTCCCGCAGGGACTCGTTT +
Preference number: 4 (lower is better)
Translates to: SPSAVASICHRDNHSSLRMVTRS*SRRDSF
Trigger: AAACGAGTCCCTGCGGGACCAGCTTCTAGTTACCAT...TCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp CTGCTAGTGTTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCCTTCTCTGTGGCTTTaGTGTCCACAGGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LLVFEARDLVVLCEQAFYPSLWL*CPQEGP
Trigger: TGGCCCCTCCTGTGGACACCAAAGCCACAGAGAAGG...GTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAACACTAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTGCTAGTGTTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACTTCCTCTCCCCTTGGTaGTGGCTGTGGGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LLVFEARDLVVLCEQAFYFLSPW*WLWVAS
Trigger: AGAAGCCACCCACAGCCACCACCAAGGGGAGAGGAA...GTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAACACTAGCAG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTGAGGAGGACCCAGGTCTTTTCCTCTCCCCTTaGTGGTGGCTGTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: MELAQKLQALLVLEEDPGLFLSP*WWLWVA
Trigger: AGCCACCCACAGCCACCACCAAGGGGAGAGGAAAAG...ACCTGGGTCCTCCTCAAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCAT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGGGATGCGCTCGTCGCTaGACGACTGCTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTGCARR*TTAAHP
Trigger: AGGATGAGCAGCAGTCGTCCAGCGACGAGCGCATCC...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCCCGGAACGCTGTCCCTaGCGAAGTGGAGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEAPERCP*RSGESR
Trigger: CCTGCTCTCTCCACTTCGCCAGGGACAGCGTTCCGG...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAACTGGGGCCAGGGGTGTaGTGCAGGTTGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKLGPGV*CRLLGW
Trigger: CCAGCCCAGCAACCTGCACCACACCCCTGGCCCCAG...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR CAA 72 bp AAACACCTGCTTCAGTTTGGGCTGCATCTCGAAGCTTaGGAGGCCTCCGTGCACAGATATCAAGAGCTTCGG +
Preference number: 4 (lower is better)
Translates to: KHLLQFGLHLEA*EASVHRYQELR
Trigger: CCGAAGCTCTTGATATCTGTGCACGGAGGCCTCCAAAGCTTCGAGATGCAGCCCAAACTGAAGCAGGTGTTT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206049.2
3UTR CAA 72 bp TCTTCTTTACATCCCGCACCAGCAGATGAAGGGTGTTaGGTGGGCCCAGTCTGGTGTTGTATAGCTCCTCCA +
Preference number: 4 (lower is better)
Translates to: SSLHPAPADEGC*VGPVWCCIAPP
Trigger: TGGAGGAGCTATACAACACCAGACTGGGCCCACCAAACACCCTTCATCTGCTGGTGCGGGATGTAAAGAAGA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR TCA 90 bp GGGAGCATTTTTGGCAGTGGTCAGACCATGTGGGCATGTCATAGTCCACTAGGGGAGTGTGGGAATTGTTaGGCACAGAGAGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: GSIFGSGQTMWACHSPLGECGNC*AQRACS
Trigger: TGAGCAAGCTCTCTGTGCTCAACAATTCCCACACTC...CCCTAGTGGACTATGACATGCCCACATGGTCTGACCACTGCCAAAAATGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp GGCTCTCGCTCTCTGTACAAACTGTGGAGTGAGAGTGAGGAAGGCTTCCCACAGCGTTGTCAGCCAAGATaGAGTGAGTGTGGGAATTGT +
Preference number: 4 (lower is better)
Translates to: GSRSLYKLWSESEEGFPQRCQPR*SECGNC
Trigger: ACAATTCCCACACTCACTTCATCTTGGCTGACAACG...CTGTGGGAAGCCTTCCTCACTCTCACTCCACAGTTTGTACAGAGAGCGAGAGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR TCA 90 bp GGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGTGTCTTCTGACGGTAGGCACCGCCCATaGGGTACTCCAGCACCAGTC +
Preference number: 4 (lower is better)
Translates to: GSLDSDELISFTGLVSSDGRHRP*GTPAPV
Trigger: GACTGGTGCTGGAGTACCTCATGGGCGGTGCCTACC...GTCAGAAGACACTAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCC
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGGGATGGCCCCAACCATaGACATGGAGATGGCCACGA +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTGWPQP*TWRWPR
Trigger: TCGTGGCCATCTCCATGTTCATGGTTGGGGCCATCC...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTTCGGGAGCTCCAGCTaGCAGTCCTTCACCATGAGG +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMFGSSS*QSFTMR
Trigger: CCTCATGGTGAAGGACTGGCAGCTGGAGCTCCCGAA...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp GGGAGCATTTTTGGCAGTGGTCAGACCATGTGGGCATGTCATAGTCCACTAGGGCTTTGGAGGCCTCCGTaGACAGATATCAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: GSIFGSGQTMWACHSPLGLWRPP*TDIKSF
Trigger: GAAGCTCTTGATATCTGTGCACGGAGGCCTCCAAAG...CCCTAGTGGACTATGACATGCCCACATGGTCTGACCACTGCCAAAAATGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR GCA 90 bp TTTGGTGGGCCCAGTCTGGTGTTGTATAGCTCCTCCAGCCTCGGGATGGTGAGGGTCGCAGTATTTGTGTaGGAAGGACAAAATGTCAGA +
Preference number: 4 (lower is better)
Translates to: FGGPSLVLYSSSSLGMVRVAVFV*EGQNVR
Trigger: TCTGACATTTTGTCCTTCGCACACAAATACTGCGAC...CCTCACCATCCCGAGGCTGGAGGAGCTATACAACACCAGACTGGGCCCACCAAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR GCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTCGCTGGACGACTGCTaGTCATCCTCCTTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTSLDDC*SSSFSR
Trigger: CCGGGAAAAGGAGGATGAGCAGCAGTCGTCCAGCGA...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGCTGGGCTGGTCCAGGTaGGACTTTGCATCCTCATCC +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMLGWSR*DFASSS
Trigger: GGATGAGGATGCAAAGTCGCACCTGGACCAGCCCAG...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTGAGGAGGACCCAGGTCTGGACTTGGAGGAGTaGTCTTTCAAGGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: MELAQKLQALLVLEEDPGLDLEE*SFKASP
Trigger: GGGGGATGCCTTGAAAGACCACTCCTCCAAGTCCAG...ACCTGGGTCCTCCTCAAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp GGGAGCATTTTTGGCAGTGGTCAGACCATGTGGGCATGTCATAGTCCACTAGGGATGGTAACTAGAAGCTaGTCCCGCAGGGACTCGTTT +
Preference number: 4 (lower is better)
Translates to: GSIFGSGQTMWACHSPLGMVTRS*SRRDSF
Trigger: AAACGAGTCCCTGCGGGACCAGCTTCTAGTTACCAT...CCCTAGTGGACTATGACATGCCCACATGGTCTGACCACTGCCAAAAATGCTCCC
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp GGAGCAAGAAGAAGCAATGTGGCAGGCCAGGAGTTAGCTTTGATTTTGATGGAGCAGTGGCGGCCAGTGTaGGCCAAAGACGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: GARRSNVAGQELALILMEQWRPV*AKDEDL
Trigger: CAGATCTTCGTCTTTGGCCCACACTGGCCGCCACTG...CTCCATCAAAATCAAAGCTAACTCCTGGCCTGCCACATTGCTTCTTCTTGCTCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp TTGGCAGACATGCAGACATTTGGGGCAGGAAAATATGGGAAACAAACCACATATGGCCAGGCTTCCCAGTaGCGGCCAGTGTGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LADMQTFGAGKYGKQTTYGQASQ*RPVWAK
Trigger: TTTGGCCCACACTGGCCGCCACTGGGAAGCCTGGCC...ATATGTGGTTTGTTTCCCATATTTTCCTGCCCCAAATGTCTGCATGTCTGCCAA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp ATTTATTGGAGGTTTAACAGGCTGGAGCAAGAAGAAGCAATGTGGCAGGCCAGGCCTTCTCTGTGGCTTTaGTGTCCACAGGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: IYWRFNRLEQEEAMWQARPSLWL*CPQEGP
Trigger: TGGCCCCTCCTGTGGACACCAAAGCCACAGAGAAGG...CCTGGCCTGCCACATTGCTTCTTCTTGCTCCAGCCTGTTAAACCTCCAATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp GGCTCTCGCTCTCTGTACAAACTGTGGAGTGAGAGTGAGGAAGGCTTCCCACAGTCTTTTCCTTCTCTGTaGCTTTGGTGTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: GSRSLYKLWSESEEGFPQSFPSL*LWCPQE
Trigger: CTCCTGTGGACACCAAAGCCACAGAGAAGGAAAAGA...CTGTGGGAAGCCTTCCTCACTCTCACTCCACAGTTTGTACAGAGAGCGAGAGCC
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp ATTTATTGGAGGTTTAACAGGCTGGAGCAAGAAGAAGCAATGTGGCAGGCCAGGTTCCTCTCCCCTTGGTaGTGGCTGTGGGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: IYWRFNRLEQEEAMWQARFLSPW*WLWVAS
Trigger: AGAAGCCACCCACAGCCACCACCAAGGGGAGAGGAA...CCTGGCCTGCCACATTGCTTCTTCTTGCTCCAGCCTGTTAAACCTCCAATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp ATTTATTGGAGGTTTAACAGGCTGGAGCAAGAAGAAGCAATGTGGCAGGCCAGGCTTTTCCTCTCCCCTTaGTGGTGGCTGTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: IYWRFNRLEQEEAMWQARLFLSP*WWLWVA
Trigger: AGCCACCCACAGCCACCACCAAGGGGAGAGGAAAAG...CCTGGCCTGCCACATTGCTTCTTCTTGCTCCAGCCTGTTAAACCTCCAATAAAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATGCCTGGCGTGGCAGGTaGGCTGGGGCCAGGGGTGTG +
Preference number: 4 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDAWRGR*AGARGV
Trigger: CACACCCCTGGCCCCAGCCCACCTGCCACGCCAGGC...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TCCCAGAAGCTTAAGTGCTTTCGGCCTCTTAGGGCCAAACAAGTTGTTGTAGAGTGGTGGCGGCCAGTGTaGGCCAAAGACGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: SQKLKCFRPLRAKQVVVEWWRPV*AKDEDL
Trigger: CAGATCTTCGTCTTTGGCCCACACTGGCCGCCACCA...CTCTACAACAACTTGTTTGGCCCTAAGAGGCCGAAAGCACTTAAGCTTCTGGGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR TCA 90 bp TTTTCCTTGTTCCTTGCCTTGGAAGACAACAGGAGCGCCAGTGATCAGTGGGGAGAGTGTGGGAATTGTTaGGCACAGAGAGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: FSLFLALEDNRSASDQWGECGNC*AQRACS
Trigger: TGAGCAAGCTCTCTGTGCTCAACAATTCCCACACTC...TCCCCACTGATCACTGGCGCTCCTGTTGTCTTCCAAGGCAAGGAACAAGGAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR TCA 90 bp TGCAGTGGCAAGCATATGCCACAGGGACAACCACTCCTCCTTACGAAACAGCTGCGTTGTCAGCCAAGATaGAGTGAGTGTGGGAATTGT +
Preference number: 4 (lower is better)
Translates to: CSGKHMPQGQPLLLTKQLRCQPR*SECGNC
Trigger: ACAATTCCCACACTCACTTCATCTTGGCTGACAACG...CAGCTGTTTCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp GGAAGGCTTCCCACAGATCTGACATTTATTGGAGGTTTAACAGGCTGGAGCAAGGGCCCAGCCTTGTGTTaGTCTTCTGCAGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: GRLPTDLTFIGGLTGWSKGPALC*SSAGRC
Trigger: ACATCTCCCTGCAGAAGATCAACACAAGGCTGGGCC...CTTGCTCCAGCCTGTTAAACCTCCAATAAATGTCAGATCTGTGGGAAGCCTTCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR TCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGGGCCCAGCCTTGTGTTaGTCTTCTGCAGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTGPALC*SSAGRC
Trigger: ACATCTCCCTGCAGAAGATCAACACAAGGCTGGGCC...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp AGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTAGGGCCAAGCTCAGCTaGTCTGGAGCTGATGCGTTG +
Preference number: 4 (lower is better)
Translates to: RVKEAMELAQKLQALLVLRAKLS*SGADAL
Trigger: CAACGCATCAGCTCCAGATCAGCTGAGCTTGGCCCT...AAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGGCCACGAGGTCTGTaGTGTTCCAGTACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMWPRGL*CSSTPG
Trigger: TCCAGGAGTACTGGAACATCACAGACCTCGTGGCCA...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTACAGAGGCACGTCCACTaGCATCGCAAACCACCACAG +
Preference number: 4 (lower is better)
Translates to: AKSAGSLDSDELISFTGLQRHVH*HRKPPQ
Trigger: CTGTGGTGGTTTGCGATGGCAGTGGACGTGCCTCTG...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp GGCTCTCGCTCTCTGTACAAACTGTGGAGTGAGAGTGAGGAAGGCTTCCCACAGAATCAGGTGGAAGGTTaGTCTTCTTTACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: GSRSLYKLWSESEEGFPQNQVEG*SSLHPA
Trigger: TGCGGGATGTAAAGAAGAGCAACCTTCCACCTGATT...CTGTGGGAAGCCTTCCTCACTCTCACTCCACAGTTTGTACAGAGAGCGAGAGCC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR GCA 90 bp GGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTCACTCTTCCCCACGCTaGCACAGGAAGACCGCCATC +
Preference number: 4 (lower is better)
Translates to: GLQLYRCMLQHVSCAASVHSSPR*HRKTAI
Trigger: GATGGCGGTCTTCCTGTGGCAGCGTGGGGAAGAGTG...AACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTATCGCTGGACGACTGCTaGTCATCCTCCTTTTCCCGG +
Preference number: 4 (lower is better)
Translates to: AKSAGSLDSDELISFTGLSLDDC*SSSFSR
Trigger: CCGGGAAAAGGAGGATGAGCAGCAGTCGTCCAGCGA...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATCTTCCATTCCCAGAAGCTTAAGTGCTTTCGGCCTCTTAGGGCCAAACAAGTTGCGTGTCTGCCTGCTTaGTGTCCTCTCCTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: IFHSQKLKCFRPLRAKQVACLPA*CPLLLC
Trigger: GCACAACAGGAGAGGACACCAAGCAGGCAGACACGC...AACTTGTTTGGCCCTAAGAGGCCGAAAGCACTTAAGCTTCTGGGAATGGAAGAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCGGCCAGGCTTCCCAGTaGCGGCCAGTGTGGGCCAAA +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTGQASQ*RPVWAK
Trigger: TTTGGCCCACACTGGCCGCCACTGGGAAGCCTGGCC...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTGCTAGTGTTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCCTTGGTGGTGGCTGTaGGTGGCTTCTTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LLVFEARDLVVLCEQAFYPWWWL*VASFPS
Trigger: AGAAGGAAAAGAAGCCACCCACAGCCACCACCAAGG...GTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAACACTAGCAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGCTCTCCCCTTGGTGGTaGCTGTGGGTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMLSPWW*LWVASF
Trigger: AAAAGAAGCCACCCACAGCCACCACCAAGGGGAGAG...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATTTATTGGAGGTTTAACAGGCTGGAGCAAGAAGAAGCAATGTGGCAGGCCAGGCTCTCCCCTTGGTGGTaGCTGTGGGTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: IYWRFNRLEQEEAMWQARLSPWW*LWVASF
Trigger: AAAAGAAGCCACCCACAGCCACCACCAAGGGGAGAG...CCTGGCCTGCCACATTGCTTCTTCTTGCTCCAGCCTGTTAAACCTCCAATAAAT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp AGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTTTCCTCTCCCCTTGGTaGTGGCTGTGGGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: RVKEAMELAQKLQALLVLFLSPW*WLWVAS
Trigger: AGAAGCCACCCACAGCCACCACCAAGGGGAGAGGAA...AAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGGCTCGAGATCGAGCCTaGATCAGATCAGACCTGTCG +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTARDRA*IRSDLS
Trigger: CGACAGGTCTGATCTGATCCAGGCTCGATCTCGAGC...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCCTCTCCCGCAGAGGGTaGGAATCGGTGCTTTCGACA +
Preference number: 4 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEALSRRG*ESVLST
Trigger: TGTCGAAAGCACCGATTCCCACCCTCTGCGGGAGAG...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR CAA 72 bp AGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTaGTGCTTGAGGAGGACCCAGGTTCAATTCTCAGGG +
Preference number: 4 (lower is better)
Translates to: RPWSWLRSYKHF*CLRRTQVQFSG
Trigger: CCCTGAGAATTGAACCTGGGTCCTCCTCAAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp ATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTGAGGAGGACCCAGGTGAGTGTGGGAATTGTTaGGCACAGAGAGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: MELAQKLQALLVLEEDPGECGNC*AQRACS
Trigger: TGAGCAAGCTCTCTGTGCTCAACAATTCCCACACTC...ACCTGGGTCCTCCTCAAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCGGCCCAGCCTTGTGTTaGTCTTCTGCAGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEAGPALC*SSAGRC
Trigger: ACATCTCCCTGCAGAAGATCAACACAAGGCTGGGCC...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp AGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTGGCCCAGCCTTGTGTTaGTCTTCTGCAGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: RVKEAMELAQKLQALLVLGPALC*SSAGRC
Trigger: ACATCTCCCTGCAGAAGATCAACACAAGGCTGGGCC...AAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp AAAGCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCAGGGCCAAGCTCAGCTaGTCTGGAGCTGATGCGTTG +
Preference number: 4 (lower is better)
Translates to: KAKSAGSLDSDELISFTGRAKLS*SGADAL
Trigger: CAACGCATCAGCTCCAGATCAGCTGAGCTTGGCCCT...GCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp GGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGTGTCTTCTGACAGGGCCAAGCTCAGCTaGTCTGGAGCTGATGCGTTG +
Preference number: 4 (lower is better)
Translates to: GSLDSDELISFTGLVSSDRAKLS*SGADAL
Trigger: CAACGCATCAGCTCCAGATCAGCTGAGCTTGGCCCT...GTCAGAAGACACTAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp TTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTGAGCCAGCAATCAGTAGGTTaGCCAGCAGGATATTGGCCA +
Preference number: 4 (lower is better)
Translates to: FEARDLVVLCEQAFYLLSQQSVG*PAGYWP
Trigger: TGGCCAATATCCTGCTGGTCAACCTACTGATTGCTG...GCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCGCCTGTCGGAGACGGTaGGGGCTGAACGGGAGATCT +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTACRRR*GLNGRS
Trigger: AGATCTCCCGTTCAGCCCTCACCGTCTCCGACAGGC...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp AAAGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCCCATCCCGGCAGGGATaGAGCAAAGGTAACAAGGGA +
Preference number: 4 (lower is better)
Translates to: KESKRPWSWLRSYKHFLCPSRQG*SKGNKG
Trigger: TCCCTTGTTACCTTTGCTTCATCCCTGCCGGGATGG...GCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR GCA 90 bp CTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCACTCCTCCTTACGAAGTCGCAGTATTTGTGTaGGAAGGACAAAATGTCAGA +
Preference number: 4 (lower is better)
Translates to: LPLQWQAYATGTTTPPYEVAVFV*EGQNVR
Trigger: TCTGACATTTTGTCCTTCGCACACAAATACTGCGAC...TTCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAG
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR GCA 90 bp CTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCACTCCTCCTTACGAAGCACTCCATGATAATTaGAAACAGCTGATACGACTG +
Preference number: 4 (lower is better)
Translates to: LPLQWQAYATGTTTPPYEALHDN*KQLIRL
Trigger: CAGTCGTATCAGCTGTTTGCAATTATCATGGAGTGC...TTCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR GCA 90 bp GGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGTGTCTTCTGACGCATCCAGCATGGCTTaGTCCAGGGCATTCACCCAG +
Preference number: 4 (lower is better)
Translates to: GSLDSDELISFTGLVSSDASSMA*SRAFTQ
Trigger: CTGGGTGAATGCCCTGGAGCAAGCCATGCTGGATGC...GTCAGAAGACACTAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTATTTTCCGAGTGTAGTTaGAGCGGTAGGCACCGCCCA +
Preference number: 4 (lower is better)
Translates to: AKSAGSLDSDELISFTGLFSECS*SGRHRP
Trigger: TGGGCGGTGCCTACCGCTGCAACTACACTCGGAAAA...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp GTGGAAACTGCTTCTGTCAACAGAAGTCAGTTGGGAAGGACAGACAGACACAAATTTTCCGAGTGTAGTTaGAGCGGTAGGCACCGCCCA +
Preference number: 4 (lower is better)
Translates to: VETASVNRSQLGRTDRHKFSECS*SGRHRP
Trigger: TGGGCGGTGCCTACCGCTGCAACTACACTCGGAAAA...TTTGTGTCTGTCTGTCCTTCCCAACTGACTTCTGTTGACAGAAGCAGTTTCCAC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR GCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTCCCAGAAGCTTAAGTaGTTTCGGCCTCTTAGGGCC +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTSQKLK*FRPLRA
Trigger: GGCCCTAAGAGGCCGAAAGCACTTAAGCTTCTGGGA...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAAGCAATGAAGTCCCGGTaGTTGGCTGCCACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKAMKSR*LAATAS
Trigger: GCTGGCTGTGGCAGCCAAGCACCGGGACTTCATTGC...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTGCTCCTGCACGCACTaGTCCTCAAACTCATGCAGT +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTCSCTH*SSNSCS
Trigger: ACTGCATGAGTTTGAGGAGCAGTGCGTGCAGGAGCA...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp ATTTATTGGAGGTTTAACAGGCTGGAGCAAGAAGAAGCAATGTGGCAGGCCAGGGGTGAGGTGAAGAGTTaGATTCTGCACAGGTGGGCT +
Preference number: 4 (lower is better)
Translates to: IYWRFNRLEQEEAMWQARGEVKS*ILHRWA
Trigger: AGCCCACCTGTGCAGAATGCAACTCTTCACCTCACC...CCTGGCCTGCCACATTGCTTCTTCTTGCTCCAGCCTGTTAAACCTCCAATAAAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp GGAGCAAGAAGAAGCAATGTGGCAGGCCAGGAGTTAGCTTTGATTTTGATGGAGTCCTTCACCATGAGGTaGAGCAGGGAATCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GARRSNVAGQELALILMESFTMR*SRESGL
Trigger: CAAGCCAGATTCCCTGCTCCACCTCATGGTGAAGGA...CTCCATCAAAATCAAAGCTAACTCCTGGCCTGCCACATTGCTTCTTCTTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTCCTTCACCATGAGGTaGAGCAGGGAATCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMSFTMR*SRESGL
Trigger: CAAGCCAGATTCCCTGCTCCACCTCATGGTGAAGGA...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATGTGGAAACTGCTTCTGTCAACAGAAGTCAGTTGGGAAGGACAGACAGACACACTGGACTTGGAGGAGTaGTCTTTCAAGGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: MWKLLLSTEVSWEGQTDTLDLEE*SFKASP
Trigger: GGGGGATGCCTTGAAAGACCACTCCTCCAAGTCCAG...TGTGTCTGTCTGTCCTTCCCAACTGACTTCTGTTGACAGAAGCAGTTTCCACAT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp CACCAGTCCTATATCAATGAGGCTGATGTGGTAATCAGGTGGAAGGTTGCTCTTCTGGACTTGGAGGAGTaGTCTTTCAAGGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: HQSYINEADVVIRWKVALLDLEE*SFKASP
Trigger: GGGGGATGCCTTGAAAGACCACTCCTCCAAGTCCAG...AAGAGCAACCTTCCACCTGATTACCACATCAGCCTCATTGATATAGGACTGGTG
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CCA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCCTGGACTTGGAGGAGTaGTCTTTCAAGGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEALDLEE*SFKASP
Trigger: GGGGGATGCCTTGAAAGACCACTCCTCCAAGTCCAG...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp GGCTCTCGCTCTCTGTACAAACTGTGGAGTGAGAGTGAGGAAGGCTTCCCACAGTCAGAGGGTTGGACATaGTCTGATAGACTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: GSRSLYKLWSESEEGFPQSEGWT*SDRLLL
Trigger: TAACAAGAGTCTATCAGACCATGTCCAACCCTCTGA...CTGTGGGAAGCCTTCCTCACTCTCACTCCACAGTTTGTACAGAGAGCGAGAGCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp ATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTGAGGAGGACCCAGGTGCTTGCTCAGAGGGTTaGACATGGTCTGATAGACTC +
Preference number: 4 (lower is better)
Translates to: MELAQKLQALLVLEEDPGACSEG*TWSDRL
Trigger: GAGTCTATCAGACCATGTCCAACCCTCTGAGCAAGC...ACCTGGGTCCTCCTCAAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCAT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCACGACAGGTACACCCTaGCCCAGCCTTGTGTTGATC +
Preference number: 4 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEATTGTP*PSLVLI
Trigger: GATCAACACAAGGCTGGGCCAGGGTGTACCTGTCGT...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp AGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTACGACAGGTACACCCTaGCCCAGCCTTGTGTTGATC +
Preference number: 4 (lower is better)
Translates to: RVKEAMELAQKLQALLVLTTGTP*PSLVLI
Trigger: GATCAACACAAGGCTGGGCCAGGGTGTACCTGTCGT...AAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp AAAGCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCAGTGGCGGCCAGTGTaGGCCAAAGACGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: KAKSAGSLDSDELISFTGQWRPV*AKDEDL
Trigger: CAGATCTTCGTCTTTGGCCCACACTGGCCGCCACTG...GCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGCTTT
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGCAAGAGCATCCAGCATaGCTTGCTCCAGGGCATTCA +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMQEHPA*LAPGHS
Trigger: TGAATGCCCTGGAGCAAGCCATGCTGGATGCTCTTG...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTGAGCATGAAGGGTGTTTGGTaGGCCCAGTCTGGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: FEARDLVVLCEQAFYLLSMKGVW*AQSGVV
Trigger: TACAACACCAGACTGGGCCCACCAAACACCCTTCAT...GCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp AGATGCTTTTCCTTGTTCCTTGCCTTGGAAGACAACAGGAGCGCCAGTGATCAGATGAAGGGTGTTTGGTaGGCCCAGTCTGGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: RCFSLFLALEDNRSASDQMKGVW*AQSGVV
Trigger: TACAACACCAGACTGGGCCCACCAAACACCCTTCAT...CTGATCACTGGCGCTCCTGTTGTCTTCCAAGGCAAGGAACAAGGAAAAGCATCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGCTGGCTGAGTTTGCCTaGTTCCGACATGAGGATCTC +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMLAEFA*FRHEDL
Trigger: GAGATCCTCATGTCGGAACCAGGCAAACTCAGCCAG...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGCTGGCTGAGTTTGCCTaGTTCCGACATGAGGATCTC +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTLAEFA*FRHEDL
Trigger: GAGATCCTCATGTCGGAACCAGGCAAACTCAGCCAG...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGACCATAGCCCATGTATaGCTGGCTCTGGAGACGAAG +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMTIAHV*LALETK
Trigger: CTTCGTCTCCAGAGCCAGCCATACATGGGCTATGGT...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATCTGGGGCCAGGGGTGTaGTGCAGGTTGCTGGGCTGG +
Preference number: 4 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDLGPGV*CRLLGW
Trigger: CCAGCCCAGCAACCTGCACCACACCCCTGGCCCCAG...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp GGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTCTCTCCCGCAGAGGGTaGGAATCGGTGCTTTCGACA +
Preference number: 4 (lower is better)
Translates to: GLQLYRCMLQHVSCAASVLSRRG*ESVLST
Trigger: TGTCGAAAGCACCGATTCCCACCCTCTGCGGGAGAG...AACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCC
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR CAA 72 bp AGCGTTTGCCCTGCTAAGTTTCTCTCTGCTGTTTCCTaGACTGGGGAGCATTTTTGGCAGTGGTCAGACCAT +
Preference number: 4 (lower is better)
Translates to: SVCPAKFLSAVS*TGEHFWQWSDH
Trigger: ATGGTCTGACCACTGCCAAAAATGCTCCCCAGTCAAGGAAACAGCAGAGAGAAACTTAGCAGGGCAAACGCT
50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp AAGCTTAAGTGCTTTCGGCCTCTTAGGGCCAAACAAGTTGTTGTAGAGAGTCCGTGTGGAGCTCTTGATTaGACCACGCTTGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: KLKCFRPLRAKQVVVESPCGALD*TTLEGA
Trigger: AGCTCCTTCAAGCGTGGTTCAATCAAGAGCTCCACA...CGGACTCTCTACAACAACTTGTTTGGCCCTAAGAGGCCGAAAGCACTTAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR TCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTGGTCATGGCAGCCTTaGTCAGACCTTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTWSWQP*SDLSQT
Trigger: TGTTTGGGAAAGGTCTGATCAAGGCTGCCATGACCA...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp AAGCTTAAGTGCTTTCGGCCTCTTAGGGCCAAACAAGTTGTTGTAGAGAGTCCGGAGTGTGGGAATTGTTaGGCACAGAGAGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: KLKCFRPLRAKQVVVESPECGNC*AQRACS
Trigger: TGAGCAAGCTCTCTGTGCTCAACAATTCCCACACTC...CGGACTCTCTACAACAACTTGTTTGGCCCTAAGAGGCCGAAAGCACTTAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR TCA 90 bp ATGGTGAGGAAATGCTGCATGTTCACTCCGTTTTCAATCAGGAGCTTTACAAAGAGGGCCAAGCTCAGCTaGTCTGGAGCTGATGCGTTG +
Preference number: 4 (lower is better)
Translates to: MVRKCCMFTPFSIRSFTKRAKLS*SGADAL
Trigger: CAACGCATCAGCTCCAGATCAGCTGAGCTTGGCCCT...CTTTGTAAAGCTCCTGATTGAAAACGGAGTGAACATGCAGCATTTCCTCACCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR TCA 90 bp TTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTGAGCTGCCTGGTTCCGACATaGGGATCTCTCGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: FEARDLVVLCEQAFYLLSCLVPT*GSLVFS
Trigger: AGAAAATACGAGAGATCCTCATGTCGGAACCAGGCA...GCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp GGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGTGTCTTCTGACTGGCCACGAGGTCTGTaGTGTTCCAGTACTCCTGGA +
Preference number: 4 (lower is better)
Translates to: GSLDSDELISFTGLVSSDWPRGL*CSSTPG
Trigger: TCCAGGAGTACTGGAACATCACAGACCTCGTGGCCA...GTCAGAAGACACTAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCC
49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTATCCACACAGTAGATaGCCCGACCATAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMYPHSR*PDHSPC
Trigger: ACATGGGCTATGGTCGGGTCATCTACTGTGTGGATA...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGCAGCAATCAGTAGGTTaGCCAGCAGGATATTGGCCA +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTQQSVG*PAGYWP
Trigger: TGGCCAATATCCTGCTGGTCAACCTACTGATTGCTG...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTACTTTCGACAGTCAGTTaGGTGCCTGTAACACCCGCT +
Preference number: 4 (lower is better)
Translates to: AKSAGSLDSDELISFTGLLSTVS*VPVTPA
Trigger: AGCGGGTGTTACAGGCACTCAACTGACTGTCGAAAG...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp CTGCTAGTGTTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACGGGAATCCTAAAGTCTaGTGTGGCTTCACAGAGAGT +
Preference number: 4 (lower is better)
Translates to: LLVFEARDLVVLCEQAFYGNPKV*CGFTES
Trigger: ACTCTCTGTGAAGCCACATCAGACTTTAGGATTCCC...GTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAACACTAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp AAGCTTAAGTGCTTTCGGCCTCTTAGGGCCAAACAAGTTGTTGTAGAGAGTCCGCTTTGGAGGCCTCCGTaGACAGATATCAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: KLKCFRPLRAKQVVVESPLWRPP*TDIKSF
Trigger: GAAGCTCTTGATATCTGTGCACGGAGGCCTCCAAAG...CGGACTCTCTACAACAACTTGTTTGGCCCTAAGAGGCCGAAAGCACTTAAGCTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR GCA 90 bp TTGTATAGCTCCTCCAGCCTCGGGATGGTGAGGAAATGCTGCATGTTCACTCCGCTTGTGTTGATCTTCTaGAGGGAGATGTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: LYSSSSLGMVRKCCMFTPLVLIF*REMCFS
Trigger: GGAAAAACACATCTCCCTGCAGAAGATCAACACAAG...CGGAGTGAACATGCAGCATTTCCTCACCATCCCGAGGCTGGAGGAGCTATACAA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR GCA 90 bp GGGAGCATTTTTGGCAGTGGTCAGACCATGTGGGCATGTCATAGTCCACTAGGGCTTGTGTTGATCTTCTaGAGGGAGATGTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: GSIFGSGQTMWACHSPLGLVLIF*REMCFS
Trigger: GGAAAAACACATCTCCCTGCAGAAGATCAACACAAG...CCCTAGTGGACTATGACATGCCCACATGGTCTGACCACTGCCAAAAATGCTCCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR GCA 90 bp CCAAACGAGGCTCTCGCTCTCTGTACAAACTGTGGAGTGAGAGTGAGGAAGGCTGTCGCAGTATTTGTGTaGGAAGGACAAAATGTCAGA +
Preference number: 4 (lower is better)
Translates to: PNEALALCTNCGVRVRKAVAVFV*EGQNVR
Trigger: TCTGACATTTTGTCCTTCGCACACAAATACTGCGAC...AGCCTTCCTCACTCTCACTCCACAGTTTGTACAGAGAGCGAGAGCCTCGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR GCA 90 bp TGCAGTGGCAAGCATATGCCACAGGGACAACCACTCCTCCTTACGAAACAGCTGGCACTCCATGATAATTaGAAACAGCTGATACGACTG +
Preference number: 4 (lower is better)
Translates to: CSGKHMPQGQPLLLTKQLALHDN*KQLIRL
Trigger: CAGTCGTATCAGCTGTTTGCAATTATCATGGAGTGC...CAGCTGTTTCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR GCA 90 bp CCAAACGAGGCTCTCGCTCTCTGTACAAACTGTGGAGTGAGAGTGAGGAAGGCTATGGTGAGGAAATGCTaGATGTTCACTCCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: PNEALALCTNCGVRVRKAMVRKC*MFTPFS
Trigger: TGAAAACGGAGTGAACATGCAGCATTTCCTCACCAT...AGCCTTCCTCACTCTCACTCCACAGTTTGTACAGAGAGCGAGAGCCTCGTTTGG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR GCA 90 bp CTGCTAGTGTTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACTCTCGAGCCAGCATCTaGATTTGCATCCACATTCTC +
Preference number: 4 (lower is better)
Translates to: LLVFEARDLVVLCEQAFYSRASI*ICIHIL
Trigger: GAGAATGTGGATGCAAATGCAGATGCTGGCTCGAGA...GTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAACACTAGCAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp AAAGCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCTCGTCGCTGGACGACTaGTGCTCATCCTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: KAKSAGSLDSDELISFTGSSLDD*CSSSFS
Trigger: GGAAAAGGAGGATGAGCAGCAGTCGTCCAGCGACGA...GCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGCTTT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATCTTCCATTCCCAGAAGCTTAAGTGCTTTCGGCCTCTTAGGGCCAAACAAGTTTCCTTCACCATGAGGTaGAGCAGGGAATCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: IFHSQKLKCFRPLRAKQVSFTMR*SRESGL
Trigger: CAAGCCAGATTCCCTGCTCCACCTCATGGTGAAGGA...AACTTGTTTGGCCCTAAGAGGCCGAAAGCACTTAAGCTTCTGGGAATGGAAGAT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CCA 90 bp AGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTTCCTTCACCATGAGGTaGAGCAGGGAATCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: RVKEAMELAQKLQALLVLSFTMR*SRESGL
Trigger: CAAGCCAGATTCCCTGCTCCACCTCATGGTGAAGGA...AAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205731.2
CDS-3UTR CCA 90 bp GGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTCTGGACTTGGAGGAGTaGTCTTTCAAGGCATCCCCC +
Preference number: 4 (lower is better)
Translates to: GLQLYRCMLQHVSCAASVLDLEE*SFKASP
Trigger: GGGGGATGCCTTGAAAGACCACTCCTCCAAGTCCAG...AACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCC
49% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAAGCCGGCCTCTGGACTTaGAGGAGTGGTCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKAGLWT*RSGLSR
Trigger: CCTTGAAAGACCACTCCTCCAAGTCCAGAGGCCGGC...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp GGCAGACATGCAGACATTTGGGGCAGGAAAATATGGGAAACAAACCACATATTTGCCGGCCTCTGGACTTaGAGGAGTGGTCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: GRHADIWGRKIWETNHIFAGLWT*RSGLSR
Trigger: CCTTGAAAGACCACTCCTCCAAGTCCAGAGGCCGGC...AAATATGTGGTTTGTTTCCCATATTTTCCTGCCCCAAATGTCTGCATGTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp TCCCAGAAGCTTAAGTGCTTTCGGCCTCTTAGGGCCAAACAAGTTGTTGTAGAGGCTTGCTCAGAGGGTTaGACATGGTCTGATAGACTC +
Preference number: 4 (lower is better)
Translates to: SQKLKCFRPLRAKQVVVEACSEG*TWSDRL
Trigger: GAGTCTATCAGACCATGTCCAACCCTCTGAGCAAGC...CTCTACAACAACTTGTTTGGCCCTAAGAGGCCGAAAGCACTTAAGCTTCTGGGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGGCTTGCTCAGAGGGTTaGACATGGTCTGATAGACTC +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMACSEG*TWSDRL
Trigger: GAGTCTATCAGACCATGTCCAACCCTCTGAGCAAGC...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGATGGTAACTAGAAGCTaGTCCCGCAGGGACTCGTTT +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTMVTRS*SRRDSF
Trigger: AAACGAGTCCCTGCGGGACCAGCTTCTAGTTACCAT...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTGAGGAGGACCCAGGTTCTTTTCCTTCTCTGTaGCTTTGGTGTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: MELAQKLQALLVLEEDPGSFPSL*LWCPQE
Trigger: CTCCTGTGGACACCAAAGCCACAGAGAAGGAAAAGA...ACCTGGGTCCTCCTCAAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp ATGTGGAAACTGCTTCTGTCAACAGAAGTCAGTTGGGAAGGACAGACAGACACACCTTGGTGGTGGCTGTaGGTGGCTTCTTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: MWKLLLSTEVSWEGQTDTPWWWL*VASFPS
Trigger: AGAAGGAAAAGAAGCCACCCACAGCCACCACCAAGG...TGTGTCTGTCTGTCCTTCCCAACTGACTTCTGTTGACAGAAGCAGTTTCCACAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAACTTTTCCTCTCCCCTTaGTGGTGGCTGTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKLFLSP*WWLWVA
Trigger: AGCCACCCACAGCCACCACCAAGGGGAGAGGAAAAG...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAATGCAGGTTGCTGGGCTaGTCCAGGTGCGACTTTGCA +
Preference number: 4 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKCRLLG*SRCDFA
Trigger: TGCAAAGTCGCACCTGGACCAGCCCAGCAACCTGCA...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATTTATTGGAGGTTTAACAGGCTGGAGCAAGAAGAAGCAATGTGGCAGGCCAGGTGCATTCTGCACAGGTaGGCTTTTGGGGAAGCACAT +
Preference number: 4 (lower is better)
Translates to: IYWRFNRLEQEEAMWQARCILHR*AFGEAH
Trigger: ATGTGCTTCCCCAAAAGCCCACCTGTGCAGAATGCA...CCTGGCCTGCCACATTGCTTCTTCTTGCTCCAGCCTGTTAAACCTCCAATAAAT
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
3UTR CAA 72 bp ACGTTTCATGTGCTGCTAGTGTTTGAAGCCAGGGACTaGGTTGTACTCTGTGAGCAGGCATTCTACCTACTG +
Preference number: 4 (lower is better)
Translates to: TFHVLLVFEARD*VVLCEQAFYLL
Trigger: CAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAACACTAGCAGCACATGAAACGT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR CAA 72 bp TGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTaGAGGAGGACCCAGGTTCAATTCTCAGGGCTAACA +
Preference number: 4 (lower is better)
Translates to: WSWLRSYKHFLC*RRTQVQFSGLT
Trigger: TGTTAGCCCTGAGAATTGAACCTGGGTCCTCCTCAAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp AAAGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTGGTCATGGCAGCCTTaGTCAGACCTTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: KESKRPWSWLRSYKHFLCWSWQP*SDLSQT
Trigger: TGTTTGGGAAAGGTCTGATCAAGGCTGCCATGACCA...GCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGAGTGTGGGAATTGTTaGGCACAGAGAGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: AKSAGSLDSDELISFTGLECGNC*AQRACS
Trigger: TGAGCAAGCTCTCTGTGCTCAACAATTCCCACACTC...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGCGTTGTCAGCCAAGATaGAGTGAGTGTGGGAATTGT +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMRCQPR*SECGNC
Trigger: ACAATTCCCACACTCACTTCATCTTGGCTGACAACG...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp ATGGTGAGGAAATGCTGCATGTTCACTCCGTTTTCAATCAGGAGCTTTACAAAGGGCCCAGCCTTGTGTTaGTCTTCTGCAGGGAGATGT +
Preference number: 4 (lower is better)
Translates to: MVRKCCMFTPFSIRSFTKGPALC*SSAGRC
Trigger: ACATCTCCCTGCAGAAGATCAACACAAGGCTGGGCC...CTTTGTAAAGCTCCTGATTGAAAACGGAGTGAACATGCAGCATTTCCTCACCAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR TCA 90 bp ATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTAGGTAGGCACCGCCCATaGGGTACTCCAGCACCAGTC +
Preference number: 4 (lower is better)
Translates to: ISLTSLCHLVNGSVVMSVGRHRP*GTPAPV
Trigger: GACTGGTGCTGGAGTACCTCATGGGCGGTGCCTACC...TACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCGGATGGCCCCAACCATaGACATGGAGATGGCCACGA +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTGWPQP*TWRWPR
Trigger: TCGTGGCCATCTCCATGTTCATGGTTGGGGCCATCC...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCTATCCACACAGTAGATaGCCCGACCATAGCCCATGT +
Preference number: 4 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEAYPHSR*PDHSPC
Trigger: ACATGGGCTATGGTCGGGTCATCTACTGTGTGGATA...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp GGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTCTTTCGACAGTCAGTTaGGTGCCTGTAACACCCGCT +
Preference number: 4 (lower is better)
Translates to: GLQLYRCMLQHVSCAASVLSTVS*VPVTPA
Trigger: AGCGGGTGTTACAGGCACTCAACTGACTGTCGAAAG...AACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp ATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCCGGACTGCGTGTCTaGCTGCTTGGTGTCCTCTCC +
Preference number: 4 (lower is better)
Translates to: ISLTSLCHLVNGSVVMSVPGLRV*LLGVLS
Trigger: GGAGAGGACACCAAGCAGGCAGACACGCAGTCCGGG...TACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085222.12
CDS-3UTR GCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCTTCGGGAGCTCCAGCTaGCAGTCCTTCACCATGAGG +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTFGSSS*QSFTMR
Trigger: CCTCATGGTGAAGGACTGGCAGCTGGAGCTCCCGAA...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp AGCTTTGATTTTGATGGAGGAATAGGGTCTATTGGGATAGGGTGGGGAAGGCTTCTTTGGAGGCCTCCGTaGACAGATATCAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: SFDFDGGIGSIGIGWGRLLWRPP*TDIKSF
Trigger: GAAGCTCTTGATATCTGTGCACGGAGGCCTCCAAAG...AAGCCTTCCCCACCCTATCCCAATAGACCCTATTCCTCCATCAAAATCAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR GCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTACTTTGGAGGCCTCCGTaGACAGATATCAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: AKSAGSLDSDELISFTGLLWRPP*TDIKSF
Trigger: GAAGCTCTTGATATCTGTGCACGGAGGCCTCCAAAG...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp ACTTGGGAGGCAGAGGCAGGCGAATTTCTGAGTTTGAGGCCAACATGGTCTACAGTCGCAGTATTTGTGTaGGAAGGACAAAATGTCAGA +
Preference number: 4 (lower is better)
Translates to: TWEAEAGEFLSLRPTWSTVAVFV*EGQNVR
Trigger: TCTGACATTTTGTCCTTCGCACACAAATACTGCGAC...TGTAGACCATGTTGGCCTCAAACTCAGAAATTCGCCTGCCTCTGCCTCCCAAGT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR GCA 90 bp AAAGCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCTCCCAGAAGCTTAAGTaGTTTCGGCCTCTTAGGGCC +
Preference number: 4 (lower is better)
Translates to: KAKSAGSLDSDELISFTGSQKLK*FRPLRA
Trigger: GGCCCTAAGAGGCCGAAAGCACTTAAGCTTCTGGGA...GCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGCTTT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCTCCTTTTCCCGGAAGTaGTCCTGCACGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTSFSRK*SCTHCS
Trigger: GGAGCAGTGCGTGCAGGAGCACTTCCGGGAAAAGGA...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCGCGTGTCTGCCTGCTTaGTGTCCTCTCCTGTTGTGC +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTACLPA*CPLLLC
Trigger: GCACAACAGGAGAGGACACCAAGCAGGCAGACACGC...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085222.12
CDS-3UTR CCA 90 bp GGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGTGTCTTCTGACTCCTTCACCATGAGGTaGAGCAGGGAATCTGGCTTG +
Preference number: 4 (lower is better)
Translates to: GSLDSDELISFTGLVSSDSFTMR*SRESGL
Trigger: CAAGCCAGATTCCCTGCTCCACCTCATGGTGAAGGA...GTCAGAAGACACTAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp AGCTTTGATTTTGATGGAGGAATAGGGTCTATTGGGATAGGGTGGGGAAGGCTTGCTTGCTCAGAGGGTTaGACATGGTCTGATAGACTC +
Preference number: 4 (lower is better)
Translates to: SFDFDGGIGSIGIGWGRLACSEG*TWSDRL
Trigger: GAGTCTATCAGACCATGTCCAACCCTCTGAGCAAGC...AAGCCTTCCCCACCCTATCCCAATAGACCCTATTCCTCCATCAAAATCAAAGCT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp GTGGAAACTGCTTCTGTCAACAGAAGTCAGTTGGGAAGGACAGACAGACACAAAATGGTAACTAGAAGCTaGTCCCGCAGGGACTCGTTT +
Preference number: 4 (lower is better)
Translates to: VETASVNRSQLGRTDRHKMVTRS*SRRDSF
Trigger: AAACGAGTCCCTGCGGGACCAGCTTCTAGTTACCAT...TTTGTGTCTGTCTGTCCTTCCCAACTGACTTCTGTTGACAGAAGCAGTTTCCAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCCCTTCTCTGTGGCTTTaGTGTCCACAGGAGGGGCCA +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTPSLWL*CPQEGP
Trigger: TGGCCCCTCCTGTGGACACCAAAGCCACAGAGAAGG...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCTTCCTCTCCCCTTGGTaGTGGCTGTGGGTGGCTTCT +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTFLSPW*WLWVAS
Trigger: AGAAGCCACCCACAGCCACCACCAAGGGGAGAGGAA...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCCTTTTCCTCTCCCCTTaGTGGTGGCTGTGGGTGGCT +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTLFLSP*WWLWVA
Trigger: AGCCACCCACAGCCACCACCAAGGGGAGAGGAAAAG...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCAAGACCGCCATCTTCTaGCGCTTCATGAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTKTAIF*RFMSTA
Trigger: GGCCGTGCTCATGAAGCGCCAGAAGATGGCGGTCTT...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTATTGTTGTCCAGATCCTaGGAGATGTCATCCACCAGC +
Preference number: 4 (lower is better)
Translates to: AKSAGSLDSDELISFTGLLLSRS*EMSSTS
Trigger: GCTGGTGGATGACATCTCCCAGGATCTGGACAACAA...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTGAGCAAACAAGATGGTGGGTaGGATAAGGATCCCCATGAT +
Preference number: 4 (lower is better)
Translates to: FEARDLVVLCEQAFYLLSKQDGG*DKDPHD
Trigger: ATCATGGGGATCCTTATCCCACCCACCATCTTGTTT...GCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTGAGCAATGTCATGATCAGCTaGTATCGCTGGAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: FEARDLVVLCEQAFYLLSNVMIS*YRWNFH
Trigger: GTGGAAGTTCCAGCGATACCAGCTGATCATGACATT...GCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATCCGGAACGCTGTCCCTaGCGAAGTGGAGAGAGCAGG +
Preference number: 4 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDPERCP*RSGESR
Trigger: CCTGCTCTCTCCACTTCGCCAGGGACAGCGTTCCGG...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTGCTAGTGTTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTTCTTTTCTCTTGCTaGGTGTTTTGTCCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LLVFEARDLVVLCEQAFYLLFSC*VFCPSG
Trigger: TCCAGAGGGACAAAACACCCAGCAAGAGAAAAGAAG...GTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAACACTAGCAG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp CTCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCGCCAGTCCTTCACCATaGGGTGGAGCAGGGAATCTG +
Preference number: 4 (lower is better)
Translates to: LYLFNFTVSLSKWLSSDVASPSP*GGAGNL
Trigger: CAGATTCCCTGCTCCACCTCATGGTGAAGGACTGGC...GACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp GGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGTGTCTTCTGACGAGTGTGGGAATTGTTaGGCACAGAGAGCTTGCTCA +
Preference number: 4 (lower is better)
Translates to: GSLDSDELISFTGLVSSDECGNC*AQRACS
Trigger: TGAGCAAGCTCTCTGTGCTCAACAATTCCCACACTC...GTCAGAAGACACTAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp ATCTTCCATTCCCAGAAGCTTAAGTGCTTTCGGCCTCTTAGGGCCAAACAAGTTCGTTGTCAGCCAAGATaGAGTGAGTGTGGGAATTGT +
Preference number: 4 (lower is better)
Translates to: IFHSQKLKCFRPLRAKQVRCQPR*SECGNC
Trigger: ACAATTCCCACACTCACTTCATCTTGGCTGACAACG...AACTTGTTTGGCCCTAAGAGGCCGAAAGCACTTAAGCTTCTGGGAATGGAAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR TCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTATGCCTGGTTCCGACATaGGGATCTCTCGTATTTTCT +
Preference number: 4 (lower is better)
Translates to: AKSAGSLDSDELISFTGLCLVPT*GSLVFS
Trigger: AGAAAATACGAGAGATCCTCATGTCGGAACCAGGCA...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCGGGAATCCTAAAGTCTaGTGTGGCTTCACAGAGAGT +
Preference number: 4 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEAGNPKV*CGFTES
Trigger: ACTCTCTGTGAAGCCACATCAGACTTTAGGATTCCC...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp CATGTTTTCCAGGTCTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCAAACACACTATTGCCATaGAGTATTGACATTAACCCA +
Preference number: 4 (lower is better)
Translates to: HVFQVSLCSGKHMPQGQPNTLLP*SIDINP
Trigger: TGGGTTAATGTCAATACTTCATGGCAATAGTGTGTT...TGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAGACCTGGAAAACATG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR GCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGTCTTCTCTATCCATaGTTTCTGACCCTTCTGGGA +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMCLLYP*FLTLLG
Trigger: TCCCAGAAGGGTCAGAAAGCATGGATAGAGAAGACA...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085222.12
CDS-3UTR GCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCATGTCCTCTCCTGTTGTaGTGGGAGCCCCACTCGGCA +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSCPLLL*WEPHSA
Trigger: TGCCGAGTGGGGCTCCCAGCACAACAGGAGAGGACA...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000085222.12
CDS-3UTR GCA 90 bp AAAGCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTTTGGAGGCCTCCGTaGACAGATATCAAGAGCTTC +
Preference number: 4 (lower is better)
Translates to: KAKSAGSLDSDELISFTGLWRPP*TDIKSF
Trigger: GAAGCTCTTGATATCTGTGCACGGAGGCCTCCAAAG...GCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGCTTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp CTGCTAGTGTTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACGCACTCCATGATAATTaGAAACAGCTGATACGACTG +
Preference number: 4 (lower is better)
Translates to: LLVFEARDLVVLCEQAFYALHDN*KQLIRL
Trigger: CAGTCGTATCAGCTGTTTGCAATTATCATGGAGTGC...GTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAACACTAGCAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGGGATGGTGAGGAAATaGTGCATGTTCACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: AKSAGSLDSDELISFTGLGMVRK*CMFTPF
Trigger: AAACGGAGTGAACATGCAGCATTTCCTCACCATCCC...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCTTTTCCGAGTGTAGTTaGAGCGGTAGGCACCGCCCA +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTFSECS*SGRHRP
Trigger: TGGGCGGTGCCTACCGCTGCAACTACACTCGGAAAA...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATCACTCTTCCCCACGCTaGCACAGGAAGACCGCCATC +
Preference number: 4 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDHSSPR*HRKTAI
Trigger: GATGGCGGTCTTCCTGTGGCAGCGTGGGGAAGAGTG...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGCAATGAAGTCCCGGTaGTTGGCTGCCACAGCCAGC +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSAMKSR*LAATAS
Trigger: GCTGGCTGTGGCAGCCAAGCACCGGGACTTCATTGC...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGGCCAGCATCTGCATTTaGATCCACATTCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTASICI*IHILFF
Trigger: GAAGAAGAGAATGTGGATGCAAATGCAGATGCTGGC...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp GGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTAGGGAGGGAGCCTCTTaGCTTCCTCATCATAGAGAT +
Preference number: 4 (lower is better)
Translates to: GLQLYRCMLQHVSCAASVREGAS*LPHHRD
Trigger: ATCTCTATGATGAGGAAGGCAAGAGGCTCCCTCCCT...AACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAAGATCAGACCTGTCGATaGCTGCCAGATTCTCCAGAG +
Preference number: 4 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKDQTCR*LPDSPE
Trigger: CTCTGGAGAATCTGGCAGGCATCGACAGGTCTGATC...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGCGCTTCTTTTCTCTTaGTGGGTGTTTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: AKSAGSLDSDELISFTGLALLFS*WVFCPS
Trigger: AGAGGGACAAAACACCCAGCAAGAGAAAAGAAGCGC...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTGAGGAGGACCCAGGTTCAGAGGGTTGGACATaGTCTGATAGACTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: MELAQKLQALLVLEEDPGSEGWT*SDRLLL
Trigger: TAACAAGAGTCTATCAGACCATGTCCAACCCTCTGA...ACCTGGGTCCTCCTCAAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp GGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGTGTCTTCTGACGCTTGCTCAGAGGGTTaGACATGGTCTGATAGACTC +
Preference number: 4 (lower is better)
Translates to: GSLDSDELISFTGLVSSDACSEG*TWSDRL
Trigger: GAGTCTATCAGACCATGTCCAACCCTCTGAGCAAGC...GTCAGAAGACACTAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCACGACAGGTACACCCTaGCCCAGCCTTGTGTTGATC +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTTTGTP*PSLVLI
Trigger: GATCAACACAAGGCTGGGCCAGGGTGTACCTGTCGT...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCCAGTGGCGGCCAGTGTaGGCCAAAGACGAAGATCTG +
Preference number: 4 (lower is better)
Translates to: LYLFNFTVSLSKWLSSDVQWRPV*AKDEDL
Trigger: CAGATCTTCGTCTTTGGCCCACACTGGCCGCCACTG...GACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTATCTTTTCCTTCTCTGTaGCTTTGGTGTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: AKSAGSLDSDELISFTGLSFPSL*LWCPQE
Trigger: CTCCTGTGGACACCAAAGCCACAGAGAAGGAAAAGA...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCTCTTTTCCTTCTCTGTaGCTTTGGTGTCCACAGGAG +
Preference number: 4 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEASFPSL*LWCPQE
Trigger: CTCCTGTGGACACCAAAGCCACAGAGAAGGAAAAGA...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TTGGCAGACATGCAGACATTTGGGGCAGGAAAATATGGGAAACAAACCACATATCCTTGGTGGTGGCTGTaGGTGGCTTCTTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LADMQTFGAGKYGKQTTYPWWWL*VASFPS
Trigger: AGAAGGAAAAGAAGCCACCCACAGCCACCACCAAGG...ATATGTGGTTTGTTTCCCATATTTTCCTGCCCCAAATGTCTGCATGTCTGCCAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp GGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGTGTCTTCTGACATGAAGGGTGTTTGGTaGGCCCAGTCTGGTGTTGTA +
Preference number: 4 (lower is better)
Translates to: GSLDSDELISFTGLVSSDMKGVW*AQSGVV
Trigger: TACAACACCAGACTGGGCCCACCAAACACCCTTCAT...GTCAGAAGACACTAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAAGACCGCCATCTTCTaGCGCTTCATGAGCACGGCC +
Preference number: 4 (lower is better)
Translates to: LYLFNFTVSLSKWLSSDVKTAIF*RFMSTA
Trigger: GGCCGTGCTCATGAAGCGCCAGAAGATGGCGGTCTT...GACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTGCTAGTGTTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACGCTGGCCAAAATCTTTaGAATTGTTGTCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: LLVFEARDLVVLCEQAFYAGQNL*NCCPDP
Trigger: AGGATCTGGACAACAATTCCAAAGATTTTGGCCAGC...GTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAACACTAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCAGGTCAGAAGTTTCATaGCAACCTGCTCATCGTGCT +
Preference number: 4 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEARSEVS*QPAHRA
Trigger: AGCACGATGAGCAGGTTGCCATGAAACTTCTGACCT...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGCACACTTTGATTTTCTaGCTGAGTTTGCCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTHTLIF*LSLPGS
Trigger: GGAACCAGGCAAACTCAGCCAGAAAATCAAAGTGTG...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGGATGCGCTCGTCGCTaGACGACTGCTGCTCATCCT +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSGCARR*TTAAHP
Trigger: AGGATGAGCAGCAGTCGTCCAGCGACGAGCGCATCC...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTATGTGGTGCAGGTTGCTaGGCTGGTCCAGGTGCGACT +
Preference number: 4 (lower is better)
Translates to: ISLTSLCHLVNGSVVMSVCGAGC*AGPGAT
Trigger: AGTCGCACCTGGACCAGCCCAGCAACCTGCACCACA...TACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGAT
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAATGTGGAGCTCTTGATTaGACCACGCTTGAAGGAGCT +
Preference number: 4 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKCGALD*TTLEGA
Trigger: AGCTCCTTCAAGCGTGGTTCAATCAAGAGCTCCACA...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085222.12
CDS-3UTR TCA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAATGGTCATGGCAGCCTTaGTCAGACCTTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKWSWQP*SDLSQT
Trigger: TGTTTGGGAAAGGTCTGATCAAGGCTGCCATGACCA...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp ATGGTGAGGAAATGCTGCATGTTCACTCCGTTTTCAATCAGGAGCTTTACAAAGTGGTCATGGCAGCCTTaGTCAGACCTTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: MVRKCCMFTPFSIRSFTKWSWQP*SDLSQT
Trigger: TGTTTGGGAAAGGTCTGATCAAGGCTGCCATGACCA...CTTTGTAAAGCTCCTGATTGAAAACGGAGTGAACATGCAGCATTTCCTCACCAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR TCA 90 bp GGCAGACATGCAGACATTTGGGGCAGGAAAATATGGGAAACAAACCACATATTTTGGTCATGGCAGCCTTaGTCAGACCTTTCCCAAACA +
Preference number: 4 (lower is better)
Translates to: GRHADIWGRKIWETNHIFWSWQP*SDLSQT
Trigger: TGTTTGGGAAAGGTCTGATCAAGGCTGCCATGACCA...AAATATGTGGTTTGTTTCCCATATTTTCCTGCCCCAAATGTCTGCATGTCTGCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp ATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTATGCAGGTGTGAGCAATaGAGTCCCGGTGCTTGGCTG +
Preference number: 4 (lower is better)
Translates to: ISLTSLCHLVNGSVVMSVCRCEQ*SPGAWL
Trigger: CAGCCAAGCACCGGGACTTCATTGCTCACACCTGCA...TACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp CTGCTAGTGTTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACTGGAACTTCCACACTTaGTTGGATATTGACTTGACT +
Preference number: 4 (lower is better)
Translates to: LLVFEARDLVVLCEQAFYWNFHT*LDIDLT
Trigger: AGTCAAGTCAATATCCAATCAAGTGTGGAAGTTCCA...GTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAACACTAGCAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp AAAGCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCTGCTTGGTCCATGATTaGACTGTACTCTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: KAKSAGSLDSDELISFTGCLVHD*TVLCTP
Trigger: TGGAGTGCAGAGTACAGTTCAATCATGGACCAAGCA...GCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGCTTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp ATTTTTGGCAGTGGTCAGACCATGTGGGCATGTCATAGTCCACTAGGGTGCCGTAACACACTATTGCCATaGAGTATTGACATTAACCCA +
Preference number: 4 (lower is better)
Translates to: IFGSGQTMWACHSPLGCRNTLLP*SIDINP
Trigger: TGGGTTAATGTCAATACTTCATGGCAATAGTGTGTT...ACGGCACCCTAGTGGACTATGACATGCCCACATGGTCTGACCACTGCCAAAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR GCA 90 bp ATTTATTGGAGGTTTAACAGGCTGGAGCAAGAAGAAGCAATGTGGCAGGCCAGGCTTGTGTTGATCTTCTaGAGGGAGATGTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: IYWRFNRLEQEEAMWQARLVLIF*REMCFS
Trigger: GGAAAAACACATCTCCCTGCAGAAGATCAACACAAG...CCTGGCCTGCCACATTGCTTCTTCTTGCTCCAGCCTGTTAAACCTCCAATAAAT
46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR GCA 90 bp ATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACAGAGGCACGTCCACTaGCATCGCAAACCACCACAG +
Preference number: 4 (lower is better)
Translates to: ISLTSLCHLVNGSVVMSVQRHVH*HRKPPQ
Trigger: CTGTGGTGGTTTGCGATGGCAGTGGACGTGCCTCTG...TACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp ATTTATTGGAGGTTTAACAGGCTGGAGCAAGAAGAAGCAATGTGGCAGGCCAGGGCACTCCATGATAATTaGAAACAGCTGATACGACTG +
Preference number: 4 (lower is better)
Translates to: IYWRFNRLEQEEAMWQARALHDN*KQLIRL
Trigger: CAGTCGTATCAGCTGTTTGCAATTATCATGGAGTGC...CCTGGCCTGCCACATTGCTTCTTCTTGCTCCAGCCTGTTAAACCTCCAATAAAT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR GCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGGCACTCCATGATAATTaGAAACAGCTGATACGACTG +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMALHDN*KQLIRL
Trigger: CAGTCGTATCAGCTGTTTGCAATTATCATGGAGTGC...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGCATCCAGCATGGCTTaGTCCAGGGCATTCACCCAG +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSASSMA*SRAFTQ
Trigger: CTGGGTGAATGCCCTGGAGCAAGCCATGCTGGATGC...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp GGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGTGTCTTCTGACTCTCGAGCCAGCATCTaGATTTGCATCCACATTCTC +
Preference number: 4 (lower is better)
Translates to: GSLDSDELISFTGLVSSDSRASI*ICIHIL
Trigger: GAGAATGTGGATGCAAATGCAGATGCTGGCTCGAGA...GTCAGAAGACACTAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCC
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCATCCCGGAAGTGCTCCTaGACGCACTGCTCCTCAAAC +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSSRKCS*THCSSN
Trigger: GTTTGAGGAGCAGTGCGTGCAGGAGCACTTCCGGGA...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATTCCTTTTCCCGGAAGTaGTCCTGCACGCACTGCTCC +
Preference number: 4 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDSFSRK*SCTHCS
Trigger: GGAGCAGTGCGTGCAGGAGCACTTCCGGGAAAAGGA...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATCTGGGCTGGTCCAGGTaGGACTTTGCATCCTCATCC +
Preference number: 4 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDLGWSR*DFASSS
Trigger: GGATGAGGATGCAAAGTCGCACCTGGACCAGCCCAG...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCAGAAGAGATCCTCTGTaGTCATCTTCAAGCTCGTCT +
Preference number: 4 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEARRDPL*SSSSSS
Trigger: AGACGAGCTTGAAGATGAGCACAGAGGATCTCTTCT...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp GGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTGCGCTTCTTTTCTCTTaGTGGGTGTTTTGTCCCTCT +
Preference number: 4 (lower is better)
Translates to: GLQLYRCMLQHVSCAASVALLFS*WVFCPS
Trigger: AGAGGGACAAAACACCCAGCAAGAGAAAAGAAGCGC...AACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGCCGGCCTCTGGACTTaGAGGAGTGGTCTTTCAAGG +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSAGLWT*RSGLSR
Trigger: CCTTGAAAGACCACTCCTCCAAGTCCAGAGGCCGGC...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTCAGAGGGTTGGACATaGTCTGATAGACTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTSEGWT*SDRLLL
Trigger: TAACAAGAGTCTATCAGACCATGTCCAACCCTCTGA...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGGATGTGGTAATCAGGTaGAAGGTTGCTCTTCTTTAC +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMDVVIR*KVALLY
Trigger: GTAAAGAAGAGCAACCTTCCACCTGATTACCACATC...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTTCTTCTTGCCTTTaGCTGGGGGTTCATCATCTT +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTFSSCL*LGVHHL
Trigger: AAGATGATGAACCCCCAGCCAAAGGCAAGAAGAAAA...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp CTCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCTCTGGGTGTGTTTGCTaGCAGACCATTTCCCGGACT +
Preference number: 4 (lower is better)
Translates to: LYLFNFTVSLSKWLSSDVSGCVC*QTISRT
Trigger: AGTCCGGGAAATGGTCTGTCAGCAAACACACCCAGA...GACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085222.12
CDS-3UTR TCA 90 bp TTGGCAGACATGCAGACATTTGGGGCAGGAAAATATGGGAAACAAACCACATATCGTTGTCAGCCAAGATaGAGTGAGTGTGGGAATTGT +
Preference number: 4 (lower is better)
Translates to: LADMQTFGAGKYGKQTTYRCQPR*SECGNC
Trigger: ACAATTCCCACACTCACTTCATCTTGGCTGACAACG...ATATGTGGTTTGTTTCCCATATTTTCCTGCCCCAAATGTCTGCATGTCTGCCAA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTGGAACTTCCACACTTaGTTGGATATTGACTTGACT +
Preference number: 4 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTWNFHT*LDIDLT
Trigger: AGTCAAGTCAATATCCAATCAAGTGTGGAAGTTCCA...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp AAAGCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCTGTCATGAAATGTCATaGTCAGCTGGTATCGCTGGA +
Preference number: 4 (lower is better)
Translates to: KAKSAGSLDSDELISFTGCHEMS*SAGIAG
Trigger: TCCAGCGATACCAGCTGATCATGACATTTCATGACA...GCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp CTCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGGACCGGCCTGTCATaGAATGTCATGATCAGCTGG +
Preference number: 4 (lower is better)
Translates to: LYLFNFTVSLSKWLSSDVRTGLS*NVMISW
Trigger: CCAGCTGATCATGACATTTCATGACAGGCCGGTCCT...GACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTTCCTCCAATCTCATTaGCATATTTTCAACCCTCTC +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMFLQSH*HIFNPL
Trigger: GAGAGGGTTGAAAATATGTCAATGAGATTGGAGGAA...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAATGCTTGGTCCATGATTaGACTGTACTCTGCACTCCA +
Preference number: 4 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKCLVHD*TVLCTP
Trigger: TGGAGTGCAGAGTACAGTTCAATCATGGACCAAGCA...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGACTGCGTGTCTGCCTaGTTGGTGTCCTCTCCTGTT +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSDCVSA*LVSSPV
Trigger: AACAGGAGAGGACACCAAGCAGGCAGACACGCAGTC...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085222.12
CDS-3UTR GCA 90 bp AAAGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCCTTGTGTTGATCTTCTaGAGGGAGATGTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: KESKRPWSWLRSYKHFLCLVLIF*REMCFS
Trigger: GGAAAAACACATCTCCCTGCAGAAGATCAACACAAG...GCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR GCA 90 bp GGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGTGTCTTCTGACAATCAGGTGGAAGGTTaGTCTTCTTTACATCCCGCA +
Preference number: 4 (lower is better)
Translates to: GSLDSDELISFTGLVSSDNQVEG*SSLHPA
Trigger: TGCGGGATGTAAAGAAGAGCAACCTTCCACCTGATT...GTCAGAAGACACTAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp GGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGTGTCTTCTGACGCCAGCATCTGCATTTaGATCCACATTCTCTTCTTC +
Preference number: 4 (lower is better)
Translates to: GSLDSDELISFTGLVSSDASICI*IHILFF
Trigger: GAAGAAGAGAATGTGGATGCAAATGCAGATGCTGGC...GTCAGAAGACACTAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTATTGTTCCAATGGGAATaGTCCTCTGCTTTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: AKSAGSLDSDELISFTGLLFQWE*SSAFCA
Trigger: AGCACAAAAAGCAGAGGAGCATTCCCATTGGAACAA...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCATCGTCGCTGGACGACTaGTGCTCATCCTCCTTTTCC +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSSSLDD*CSSSFS
Trigger: GGAAAAGGAGGATGAGCAGCAGTCGTCCAGCGACGA...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCACAGGTCTCAGCTCTGTaGTCAAGGGACCTTCAAGGG +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSQVSAL*SRDLQG
Trigger: CCCTTGAAGGTCCCTTGAGCACAGAGCTGAGACCTG...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTATCAGAGGGTTGGACATaGTCTGATAGACTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: AKSAGSLDSDELISFTGLSEGWT*SDRLLL
Trigger: TAACAAGAGTCTATCAGACCATGTCCAACCCTCTGA...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp AAAGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTCAGAGGGTTGGACATaGTCTGATAGACTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: KESKRPWSWLRSYKHFLCSEGWT*SDRLLL
Trigger: TAACAAGAGTCTATCAGACCATGTCCAACCCTCTGA...GCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCTTT
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CCA 90 bp CTCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCCCTTGGTGGTGGCTGTaGGTGGCTTCTTTTCCTTCT +
Preference number: 4 (lower is better)
Translates to: LYLFNFTVSLSKWLSSDVPWWWL*VASFPS
Trigger: AGAAGGAAAAGAAGCCACCCACAGCCACCACCAAGG...GACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGAG
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACTCTCCCCTTGGTGGTaGCTGTGGGTGGCTTCTTTT +
Preference number: 4 (lower is better)
Translates to: ISLTSLCHLVNGSVVMSVLSPWW*LWVASF
Trigger: AAAAGAAGCCACCCACAGCCACCACCAAGGGGAGAG...TACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGCATCTTCGTTCTCCTTaGATGTTTGATAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMHLRSP*MFDRRS
Trigger: ACTTCTCCTATCAAACATCCAAGGAGAACGAAGATG...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATGCTCGAGATCGAGCCTaGATCAGATCAGACCTGTCG +
Preference number: 4 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDARDRA*IRSDLS
Trigger: CGACAGGTCTGATCTGATCCAGGCTCGATCTCGAGC...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
3UTR CAA 72 bp ACGACAACAACAAAAAGAGTCAAAGAGGCCATGGAGTaGGCTCAGAAGTTACAAGCACTTCTTGTGCTTGAG +
Preference number: 4 (lower is better)
Translates to: TTTTKRVKEAME*AQKLQALLVLE
Trigger: CTCAAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCTTTTTGTTGTTGTCGT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR TCA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATAATCCATTCTTGGGGTaGTGGCCATCCATCCATCCG +
Preference number: 4 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDNPFLG*WPSIHP
Trigger: CGGATGGATGGATGGCCATCACCCCAAGAATGGATT...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAAATCCATTCTTGGGGTaGTGGCCATCCATCCATCCG +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSNPFLG*WPSIHP
Trigger: CGGATGGATGGATGGCCATCACCCCAAGAATGGATT...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGCACTTGATTGGATATTaGCTTGACTTCAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMHLIGY*LDFKEG
Trigger: ACCTTCTTTGAAGTCAAGTCAATATCCAATCAAGTG...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp ATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTAAGGACCGGCCTGTCATaGAATGTCATGATCAGCTGG +
Preference number: 4 (lower is better)
Translates to: ISLTSLCHLVNGSVVMSVRTGLS*NVMISW
Trigger: CCAGCTGATCATGACATTTCATGACAGGCCGGTCCT...TACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGAT
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp TCCCAGAAGCTTAAGTGCTTTCGGCCTCTTAGGGCCAAACAAGTTGTTGTAGAGAGATGCATTCCCTTTTaGAAAATGTCTTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: SQKLKCFRPLRAKQVVVERCIPF*KMSSLS
Trigger: GGATAGAGAAGACATTTTGCAAAAGGGAATGCATCT...CTCTACAACAACTTGTTTGGCCCTAAGAGGCCGAAAGCACTTAAGCTTCTGGGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR GCA 90 bp GGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTCTTGTGTTGATCTTCTaGAGGGAGATGTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: GLQLYRCMLQHVSCAASVLVLIF*REMCFS
Trigger: GGAAAAACACATCTCCCTGCAGAAGATCAACACAAG...AACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCC
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp GGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGTGTCTTCTGACATGGTGAGGAAATGCTaGATGTTCACTCCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: GSLDSDELISFTGLVSSDMVRKC*MFTPFS
Trigger: TGAAAACGGAGTGAACATGCAGCATTTCCTCACCAT...GTCAGAAGACACTAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp AAAGCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCTCTTCTTTTTCTTCTTaGCTTTGGCTGGGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: KAKSAGSLDSDELISFTGSSFSS*LWLGVH
Trigger: ATGAACCCCCAGCCAAAGGCAAGAAGAAAAAGAAGA...GCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGCTTT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTACGAAGGTCAACAGTCTaGAGAGAAGTTTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: AKSAGSLDSDELISFTGLRRSTV*REVFMK
Trigger: TTTCATGAAAACTTCTCTGCAGACTGTTGACCTTCG...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCCTTCTTGCCTTTGGCTaGGGGTTCATCATCTTCCAT +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTLLAFG*GFIIFH
Trigger: ATGGAAGATGATGAACCCCCAGCCAAAGGCAAGAAG...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp GGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTTTTCTTCTTGCCTTTaGCTGGGGGTTCATCATCTT +
Preference number: 4 (lower is better)
Translates to: GLQLYRCMLQHVSCAASVFSSCL*LGVHHL
Trigger: AAGATGATGAACCCCCAGCCAAAGGCAAGAAGAAAA...AACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCC
43% GC, longest homopolymer 6 nt, total homopolymer stretches 11 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCTTGTTGTCCAGATCCTaGGAGATGTCATCCACCAGC +
Preference number: 4 (lower is better)
Translates to: LYLFNFTVSLSKWLSSDVLLSRS*EMSSTS
Trigger: GCTGGTGGATGACATCTCCCAGGATCTGGACAACAA...GACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp AAAGCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCATGTTCCAGTACTCCTaGAGCCACACTTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: KAKSAGSLDSDELISFTGMFQYS*SHTLIF
Trigger: GAAAATCAAAGTGTGGCTCCAGGAGTACTGGAACAT...GCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGCTTT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAACCATAGCCCATGTATaGCTGGCTCTGGAGACGAAG +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSTIAHV*LALETK
Trigger: CTTCGTCTCCAGAGCCAGCCATACATGGGCTATGGT...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTATAGACGAAGCTTCTaGACTTCATTGTTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: LLSAGITTVQVYAATRFMYRRSF*TSLFCR
Trigger: CCTACAAAACAATGAAGTCCAGAAGCTTCGTCTATA...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCCACTTGATTGGATATTaGCTTGACTTCAAAGAAGGT +
Preference number: 4 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEAHLIGY*LDFKEG
Trigger: ACCTTCTTTGAAGTCAAGTCAATATCCAATCAAGTG...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAACTTGTGTTGATCTTCTaGAGGGAGATGTGTTTTTCC +
Preference number: 4 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKLVLIF*REMCFS
Trigger: GGAAAAACACATCTCCCTGCAGAAGATCAACACAAG...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAAGTCGCAGTATTTGTGTaGGAAGGACAAAATGTCAGA +
Preference number: 4 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKVAVFV*EGQNVR
Trigger: TCTGACATTTTGTCCTTCGCACACAAATACTGCGAC...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp ATGGTGAGGAAATGCTGCATGTTCACTCCGTTTTCAATCAGGAGCTTTACAAAGGCACTCCATGATAATTaGAAACAGCTGATACGACTG +
Preference number: 4 (lower is better)
Translates to: MVRKCCMFTPFSIRSFTKALHDN*KQLIRL
Trigger: CAGTCGTATCAGCTGTTTGCAATTATCATGGAGTGC...CTTTGTAAAGCTCCTGATTGAAAACGGAGTGAACATGCAGCATTTCCTCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR GCA 90 bp CTCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCGGGATGGTGAGGAAATaGTGCATGTTCACTCCGTTT +
Preference number: 4 (lower is better)
Translates to: LYLFNFTVSLSKWLSSDVGMVRK*CMFTPF
Trigger: AAACGGAGTGAACATGCAGCATTTCCTCACCATCCC...GACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAAGGGAGGGAGCCTCTTaGCTTCCTCATCATAGAGAT +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSREGAS*LPHHRD
Trigger: ATCTCTATGATGAGGAAGGCAAGAGGCTCCCTCCCT...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATGGTGAGGAAATGCTGCATGTTCACTCCGTTTTCAATCAGGAGCTTTACAAAGTCAGAGGGTTGGACATaGTCTGATAGACTCTTGTTA +
Preference number: 4 (lower is better)
Translates to: MVRKCCMFTPFSIRSFTKSEGWT*SDRLLL
Trigger: TAACAAGAGTCTATCAGACCATGTCCAACCCTCTGA...CTTTGTAAAGCTCCTGATTGAAAACGGAGTGAACATGCAGCATTTCCTCACCAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAATGGTAACTAGAAGCTaGTCCCGCAGGGACTCGTTT +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSMVTRS*SRRDSF
Trigger: AAACGAGTCCCTGCGGGACCAGCTTCTAGTTACCAT...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp AAAGCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCAGATCTTTGTTCCAATaGGAATGCTCCTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: KAKSAGSLDSDELISFTGRSLFQ*ECSSAF
Trigger: AAAAGCAGAGGAGCATTCCCATTGGAACAAAGATCT...GCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGCTTT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCCTTCTTTTCTCTTGCTaGGTGTTTTGTCCCTCTGGA +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTLLFSC*VFCPSG
Trigger: TCCAGAGGGACAAAACACCCAGCAAGAGAAAAGAAG...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCACGTTGTCAGCCAAGATaGAGTGAGTGTGGGAATTGT +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSRCQPR*SECGNC
Trigger: ACAATTCCCACACTCACTTCATCTTGGCTGACAACG...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp AAAGCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCAAAGAAGGTATTGTTaGAAACAGCAATCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: KAKSAGSLDSDELISFTGQRRYC*KQQSVG
Trigger: ACCTACTGATTGCTGTTTTCAACAATACCTTCTTTG...GCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGCTTT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp AAAGCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCAGATGCATTCCCTTTTaGAAAATGTCTTCTCTATCC +
Preference number: 4 (lower is better)
Translates to: KAKSAGSLDSDELISFTGRCIPF*KMSSLS
Trigger: GGATAGAGAAGACATTTTGCAAAAGGGAATGCATCT...GCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGCTTT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000085222.12
CDS-3UTR GCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCTTGTTCCAATGGGAATaGTCCTCTGCTTTTTGTGCT +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTLFQWE*SSAFCA
Trigger: AGCACAAAAAGCAGAGGAGCATTCCCATTGGAACAA...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATTGTACATGGCTTTATTaGAGTAACCCCCACCCTGGA +
Preference number: 4 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDCTWLY*SNPHPG
Trigger: TCCAGGGTGGGGGTTACTCCAATAAAGCCATGTACA...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000085222.12
CDS-3UTR CCA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATCTTCTTGCCTTTGGCTaGGGGTTCATCATCTTCCAT +
Preference number: 4 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDLLAFG*GFIIFH
Trigger: ATGGAAGATGATGAACCCCCAGCCAAAGGCAAGAAG...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTAAGGTCAGAAGTTTCATaGCAACCTGCTCATCGTGCT +
Preference number: 4 (lower is better)
Translates to: ISLTSLCHLVNGSVVMSVRSEVS*QPAHRA
Trigger: AGCACGATGAGCAGGTTGCCATGAAACTTCTGACCT...TACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGAT
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAACATCTTCGTTCTCCTTaGATGTTTGATAGGAGAAGT +
Preference number: 4 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKHLRSP*MFDRRS
Trigger: ACTTCTCCTATCAAACATCCAAGGAGAACGAAGATG...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAAAGATCTTTGTTCCAATaGGAATGCTCCTCTGCTTTT +
Preference number: 4 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKRSLFQ*ECSSAF
Trigger: AAAAGCAGAGGAGCATTCCCATTGGAACAAAGATCT...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCATGTTCCAGTACTCCTaGAGCCACACTTTGATTTTC +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTMFQYS*SHTLIF
Trigger: GAAAATCAAAGTGTGGCTCCAGGAGTACTGGAACAT...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAATGTCATGATCAGCTaGTATCGCTGGAACTTCCAC +
Preference number: 4 (lower is better)
Translates to: LYLFNFTVSLSKWLSSDVNVMIS*YRWNFH
Trigger: GTGGAAGTTCCAGCGATACCAGCTGATCATGACATT...GACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAACAAAGAAGGTATTGTTaGAAACAGCAATCAGTAGGT +
Preference number: 4 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKQRRYC*KQQSVG
Trigger: ACCTACTGATTGCTGTTTTCAACAATACCTTCTTTG...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATTGTCATGAAATGTCATaGTCAGCTGGTATCGCTGGA +
Preference number: 4 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDCHEMS*SAGIAG
Trigger: TCCAGCGATACCAGCTGATCATGACATTTCATGACA...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAAAACAAGATGGTGGGTaGGATAAGGATCCCCATGAT +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSKQDGG*DKDPHD
Trigger: ATCATGGGGATCCTTATCCCACCCACCATCTTGTTT...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCACACACTTTGATTTTCTaGCTGAGTTTGCCTGGTTCC +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSHTLIF*LSLPGS
Trigger: GGAACCAGGCAAACTCAGCCAGAAAATCAAAGTGTG...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTCGCAGTATTTGTGTaGGAAGGACAAAATGTCAGA +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSVAVFV*EGQNVR
Trigger: TCTGACATTTTGTCCTTCGCACACAAATACTGCGAC...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATATGGTGAGGAAATGCTaGATGTTCACTCCGTTTTCA +
Preference number: 4 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDMVRKC*MFTPFS
Trigger: TGAAAACGGAGTGAACATGCAGCATTTCCTCACCAT...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATTCTTCTTTTTCTTCTTaGCTTTGGCTGGGGGTTCAT +
Preference number: 4 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDSSFSS*LWLGVH
Trigger: ATGAACCCCCAGCCAAAGGCAAGAAGAAAAAGAAGA...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
39% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR GCA 90 bp CTCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCCGAAGGTCAACAGTCTaGAGAGAAGTTTTCATGAAA +
Preference number: 4 (lower is better)
Translates to: LYLFNFTVSLSKWLSSDVRRSTV*REVFMK
Trigger: TTTCATGAAAACTTCTCTGCAGACTGTTGACCTTCG...GACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp ATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTAGCTGGCCAAAATCTTTaGAATTGTTGTCCAGATCCT +
Preference number: 4 (lower is better)
Translates to: ISLTSLCHLVNGSVVMSVAGQNL*NCCPDP
Trigger: AGGATCTGGACAACAATTCCAAAGATTTTGGCCAGC...TACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGAT
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CCA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCTATAGACGAAGCTTCTaGACTTCATTGTTTTGTAGG +
Preference number: 4 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTYRRSF*TSLFCR
Trigger: CCTACAAAACAATGAAGTCCAGAAGCTTCGTCTATA...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCATTCCTCCAATCTCATTaGCATATTTTCAACCCTCTC +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSFLQSH*HIFNPL
Trigger: GAGAGGGTTGAAAATATGTCAATGAGATTGGAGGAA...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR TCA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGACCAAGATATTTGTTaGCACCAAAGATGTCTAACA +
Preference number: 4 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSDQDIC*HQRCLT
Trigger: TGTTAGACATCTTTGGTGTCAACAAATATCTTGGTC...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS CCA 90 bp CTGTGCTCAAGGGACCTTCAAGGGCGAGCCGGCTGCGGCCTGGCGTaGCAGGTGGGCTGGGGCCAGGGGTGTGGTGCAGGTTGCTGGGCT +
Preference number: 5 (lower is better)
Translates to: LCSRDLQGRAGCGLA*QVGWGQGCGAGCWA
Trigger: AGCCCAGCAACCTGCACCACACCCCTGGCCCCAGCCCACCTGCCACGCCAGGCCGCAGCCGGCTCGCCCTTGAAGGTCCCTTGAGCACAG
71% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 90 bp ACTCGCCTGCGGAGATGCCAGGGTCCGATCCAGGTCTCAGCTCTGTaGTCAAGGGACCTTCAAGGGCGAGCCGGCTGCGGCCTGGCGTGG +
Preference number: 5 (lower is better)
Translates to: TRLRRCQGPIQVSAL*SRDLQGRAGCGLAW
Trigger: CCACGCCAGGCCGCAGCCGGCTCGCCCTTGAAGGTCCCTTGAGCACAGAGCTGAGACCTGGATCGGACCCTGGCATCTCCGCAGGCGAGT
68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 90 bp CCAGCTCGCTCTCGGAGGACTCGTGGGCCATGGCCTTGTAGAGCTTaGAGGCCACCAAGGCCTTCGCCATGCACTCTTCCCCACGCTGCC +
Preference number: 5 (lower is better)
Translates to: PARSRRTRGPWPCRA*RPPRPSPCTLPHAA
Trigger: GGCAGCGTGGGGAAGAGTGCATGGCGAAGGCCTTGGTGGCCTGCAAGCTCTACAAGGCCATGGCCCACGAGTCCTCCGAGAGCGAGCTGG
66% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS CCA 90 bp CTGGCGTGGCAGGTGGGCTGGGGCCAGGGGTGTGGTGCAGGTTGCTaGGCTGGTCCAGGTGCGACTTTGCATCCTCATCCTTCACACGAA +
Preference number: 5 (lower is better)
Translates to: LAWQVGWGQGCGAGC*AGPGATLHPHPSHE
Trigger: TTCGTGTGAAGGATGAGGATGCAAAGTCGCACCTGGACCAGCCCAGCAACCTGCACCACACCCCTGGCCCCAGCCCACCTGCCACGCCAG
64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 90 bp ACCCTCTCGCTTGTGACCCGGATGCGCTCGTCGCTGGACGACTGCTaGTCATCCTCCTTTTCCCGGAAGTGCTCCTGCACGCACTGCTCC +
Preference number: 5 (lower is better)
Translates to: TLSLVTRMRSSLDDC*SSSFSRKCSCTHCS
Trigger: GGAGCAGTGCGTGCAGGAGCACTTCCGGGAAAAGGAGGATGAGCAGCAGTCGTCCAGCGACGAGCGCATCCGGGTCACAAGCGAGAGGGT
63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
ENSMUST00000206848.2
CDS GCA 90 bp TCAACCCTCTCGCTTGTGACCCGGATGCGCTCGTCGCTGGACGACTaGTGCTCATCCTCCTTTTCCCGGAAGTGCTCCTGCACGCACTGC +
Preference number: 5 (lower is better)
Translates to: STLSLVTRMRSSLDD*CSSSFSRKCSCTHC
Trigger: GCAGTGCGTGCAGGAGCACTTCCGGGAAAAGGAGGATGAGCAGCAGTCGTCCAGCGACGAGCGCATCCGGGTCACAAGCGAGAGGGTTGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
ENSMUST00000206848.2
CDS GCA 90 bp GCTCTGGGTGTGTTTGCTGACAGACCATTTCCCGGACTGCGTGTCTaGCTGCTTGGTGTCCTCTCCTGTTGTGCTGGGAGCCCCACTCGG +
Preference number: 5 (lower is better)
Translates to: ALGVFADRPFPGLRV*LLGVLSCCAGSPTR
Trigger: CCGAGTGGGGCTCCCAGCACAACAGGAGAGGACACCAAGCAGGCAGACACGCAGTCCGGGAAATGGTCTGTCAGCAAACACACCCAGAGC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000205348.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 90 bp GATGCTGCTCTGCCGCAGCAGGTAGGTGGCCTCGCATTCGGAGGATaGTCGAGATCGAGCCTGGATCAGATCAGACCTGTCGATGCCTGC +
Preference number: 5 (lower is better)
Translates to: DAALPQQVGGLAFGG*SRSSLDQIRPVDAC
Trigger: GCAGGCATCGACAGGTCTGATCTGATCCAGGCTCGATCTCGAGCATCCTCCGAATGCGAGGCCACCTACCTGCTGCGGCAGAGCAGCATC
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS-3UTR CAA 90 bp TGGGATAGGGTGGGGAAGGCTTGTGTGTGGCAGCTGGCCTGGATGACTCCGATGTCCTTCTCTGTGGCTTaGGTGTCCACAGGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: WDRVGKACVWQLAWMTPMSFSVA*VSTGGA
Trigger: GGCCCCTCCTGTGGACACCAAAGCCACAGAGAAGGA...CATCGGAGTCATCCAGGCCAGCTGCCACACACAAGCCTTCCCCACCCTATCCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS GCA 90 bp TGGGTGTGTTTGCTGACAGACCATTTCCCGGACTGCGTGTCTGCCTaGTTGGTGTCCTCTCCTGTTGTGCTGGGAGCCCCACTCGGCAGA +
Preference number: 5 (lower is better)
Translates to: WVCLLTDHFPDCVSA*LVSSPVVLGAPLGR
Trigger: TCTGCCGAGTGGGGCTCCCAGCACAACAGGAGAGGACACCAAGCAGGCAGACACGCAGTCCGGGAAATGGTCTGTCAGCAAACACACCCA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000205348.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS-3UTR CAA 90 bp GATAGGTGGTTAGCAGTAGCTAGCCTCCGGCTTGGGAGGCTGGAGCCATCATGCTCCTTCTCTGTGGCTTaGGTGTCCACAGGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: DRWLAVASLRLGRLEPSCSFSVA*VSTGGA
Trigger: GGCCCCTCCTGTGGACACCAAAGCCACAGAGAAGGA...GCATGATGGCTCCAGCCTCCCAAGCCGGAGGCTAGCTACTGCTAACCACCTATC
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp GCTTGGGAGGCTGGAGCCATCATGCATGTTTTCCAGGTCTCCCTCTGCAGTGGCACCTCAGCACCATACTaGCCCAGGGTGCCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: AWEAGAIMHVFQVSLCSGTSAPY*PRVPLS
Trigger: TGACAACGGCACCCTGGGCAAGTATGGTGCTGAGGT...GCCACTGCAGAGGGAGACCTGGAAAACATGCATGATGGCTCCAGCCTCCCAAGC
59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp AACGGGCTGAGAGAGCAGAGGCATGGGGCCCAGAGGGGGCGCTATTGTAGGAAGTCTGGAGCTGATGCGTaGGTTCCTTTGAGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: NGLREQRHGAQRGRYCRKSGADA*VPLSKA
Trigger: TGCCTTGCTCAAAGGAACCAACGCATCAGCTCCAGA...CTTCCTACAATAGCGCCCCCTCTGGGCCCCATGCCTCTGCTCTCTCAGCCCGTT
59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS CCA 90 bp TCCACAGCGAGCTGGCCAAAATCTTTGGAATTGTTGTCCAGATCCTaGGAGATGTCATCCACCAGCTCGCTCTCGGAGGACTCGTGGGCC +
Preference number: 5 (lower is better)
Translates to: STASWPKSLELLSRS*EMSSTSSLSEDSWA
Trigger: GGCCCACGAGTCCTCCGAGAGCGAGCTGGTGGATGACATCTCCCAGGATCTGGACAACAATTCCAAAGATTTTGGCCAGCTCGCTGTGGA
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS-3UTR CAA 90 bp AGGGTGGGGAAGGCTTGTGTGTGGCAGCTGGCCTGGATGACTCCGATGTACAGTGTGGTCATGGCAGCCTaGATCAGACCTTTCCCAAAC +
Preference number: 5 (lower is better)
Translates to: RVGKACVWQLAWMTPMYSVVMAA*IRPFPN
Trigger: GTTTGGGAAAGGTCTGATCAAGGCTGCCATGACCAC...ACTGTACATCGGAGTCATCCAGGCCAGCTGCCACACACAAGCCTTCCCCACCCT
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CAA 90 bp GCTTGGGAGGCTGGAGCCATCATGCATGTTTTCCAGGTCTCCCTCTGCAGTGGCGTGGTCATGGCAGCCTaGATCAGACCTTTCCCAAAC +
Preference number: 5 (lower is better)
Translates to: AWEAGAIMHVFQVSLCSGVVMAA*IRPFPN
Trigger: GTTTGGGAAAGGTCTGATCAAGGCTGCCATGACCAC...GCCACTGCAGAGGGAGACCTGGAAAACATGCATGATGGCTCCAGCCTCCCAAGC
57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp GGCTCTCGCTCTCTGTACAAACTGTGGAGTGAGAGTGAGGAAGGCTTCCCACAGAGCATCCAGCATGGCTaGCTCCAGGGCATTCACCCA +
Preference number: 5 (lower is better)
Translates to: GSRSLYKLWSESEEGFPQSIQHG*LQGIHP
Trigger: TGGGTGAATGCCCTGGAGCAAGCCATGCTGGATGCT...CTGTGGGAAGCCTTCCTCACTCTCACTCCACAGTTTGTACAGAGAGCGAGAGCC
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CAA 90 bp CACCTGCTTCAGTTTGGGCTGCATCTCGAAGCTTTGGAGGCCTCCGTGCACAGATCCCATAGGAGTCTGTaGGGTAGCTCTGGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: HLLQFGLHLEALEASVHRSHRSL*GSSGCV
Trigger: AACACACCCAGAGCTACCCAACAGACTCCTATGGGA...TCTGTGCACGGAGGCCTCCAAAGCTTCGAGATGCAGCCCAAACTGAAGCAGGTG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000206049.2
CDS-3UTR CAA 90 bp GGGCTGAGAGAGCAGAGGCATGGGGCCCAGAGGGGGCGCTATTGTAGGAAGGAGGATGCGTTGGTTCCTTaGAGCAAGGCAGTTAAAATT +
Preference number: 5 (lower is better)
Translates to: GLREQRHGAQRGRYCRKEDALVP*SKAVKI
Trigger: AATTTTAACTGCCTTGCTCAAAGGAACCAACGCATC...CTCCTTCCTACAATAGCGCCCCCTCTGGGCCCCATGCCTCTGCTCTCTCAGCCC
56% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS TCA 90 bp CAAGAATCCCATAGGAGTCTGTTGGGTAGCTCTGGGTGTGTTTGCTaGCAGACCATTTCCCGGACTGCGTGTCTGCCTGCTTGGTGTCCT +
Preference number: 5 (lower is better)
Translates to: QESHRSLLGSSGCVC*QTISRTACLPAWCP
Trigger: AGGACACCAAGCAGGCAGACACGCAGTCCGGGAAATGGTCTGTCAGCAAACACACCCAGAGCTACCCAACAGACTCCTATGGGATTCTTG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000205348.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CCA 90 bp GAGCTCCAGCTGCCAGTCCTTCACCATGAGGTGGAGCAGGGAATCTaGCTTGGTGTCGTAGGAGACTCGGATGTACATGGCTTTATTGGA +
Preference number: 5 (lower is better)
Translates to: ELQLPVLHHEVEQGI*LGVVGDSDVHGFIG
Trigger: TCCAATAAAGCCATGTACATCCGAGTCTCCTACGACACCAAGCCAGATTCCCTGCTCCACCTCATGGTGAAGGACTGGCAGCTGGAGCTC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000205348.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CCA 90 bp ACGTTAGGACCACCTTCTACCACTAGGCCCACGACAGGTACACCCTaGCCCAGCCTTGTGTTGATCTTCTGCAGGGAGATGTGTTTTTCC +
Preference number: 5 (lower is better)
Translates to: TLGPPSTTRPTTGTP*PSLVLIFCREMCFS
Trigger: GGAAAAACACATCTCCCTGCAGAAGATCAACACAAGGCTGGGCCAGGGTGTACCTGTCGTGGGCCTAGTGGTAGAAGGTGGTCCTAACGT
54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000085222.12
ENSMUST00000177102.8
ENSMUST00000205348.2
ENSMUST00000205731.2
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206706.2
CDS CCA 90 bp CTCATCTTCAAGCTCGTCTTGCGAGGCTGCTTCGGACACGATGTATaGGATGTCTGTGCTGCGGGAGCGCGTGATCCTTTGAACTTGACA +
Preference number: 5 (lower is better)
Translates to: LIFKLVLRGCFGHDV*DVCAAGARDPLNLT
Trigger: TGTCAAGTTCAAAGGATCACGCGCTCCCGCAGCACAGACATCCCATACATCGTGTCCGAAGCAGCCTCGCAAGACGAGCTTGAAGATGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS-3UTR CAA 90 bp CTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCACTCCTCCTTACGAATTGAGCACAGAGAGCTaGCTCAGAGGGTTGGACATG +
Preference number: 5 (lower is better)
Translates to: LPLQWQAYATGTTTPPYELSTES*LRGLDM
Trigger: CATGTCCAACCCTCTGAGCAAGCTCTCTGTGCTCAA...TTCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp TGGGAGGCAGAGGCAGGCGAATTTCTGAGTTTGAGGCCAACATGGTCTACAGAGTGCCATCTCGACATCTaGCTGACCCTCGGAACCCAT +
Preference number: 5 (lower is better)
Translates to: WEAEAGEFLSLRPTWSTECHLDI*LTLGTH
Trigger: ATGGGTTCCGAGGGTCAGCAAGATGTCGAGATGGCA...CTCTGTAGACCATGTTGGCCTCAAACTCAGAAATTCGCCTGCCTCTGCCTCCCA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp CTGCTAGTGTTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACTCCTTCTCTGTGGCTTaGGTGTCCACAGGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: LLVFEARDLVVLCEQAFYSFSVA*VSTGGA
Trigger: GGCCCCTCCTGTGGACACCAAAGCCACAGAGAAGGA...GTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAACACTAGCAG
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp TTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTGAGCATGAAGTCCCGGTGCTaGGCTGCCACAGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: FEARDLVVLCEQAFYLLSMKSRC*AATASF
Trigger: GAAGCTGGCTGTGGCAGCCAAGCACCGGGACTTCAT...GCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp TTGTATAGCTCCTCCAGCCTCGGGATGGTGAGGAAATGCTGCATGTTCACTCCGTCCCATAGGAGTCTGTaGGGTAGCTCTGGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: LYSSSSLGMVRKCCMFTPSHRSL*GSSGCV
Trigger: AACACACCCAGAGCTACCCAACAGACTCCTATGGGA...CGGAGTGAACATGCAGCATTTCCTCACCATCCCGAGGCTGGAGGAGCTATACAA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CAA 90 bp ATTTTTGGCAGTGGTCAGACCATGTGGGCATGTCATAGTCCACTAGGGTGCCGTCCAATCAGGTCTTCCTaGTTCTCCACCATGCCCCAG +
Preference number: 5 (lower is better)
Translates to: IFGSGQTMWACHSPLGCRPIRSS*FSTMPQ
Trigger: CTGGGGCATGGTGGAGAACAAGGAAGACCTGATTGG...ACGGCACCCTAGTGGACTATGACATGCCCACATGGTCTGACCACTGCCAAAAAT
53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp TGGGAGGCAGAGGCAGGCGAATTTCTGAGTTTGAGGCCAACATGGTCTACAGAGTTGAGCACAGAGAGCTaGCTCAGAGGGTTGGACATG +
Preference number: 5 (lower is better)
Translates to: WEAEAGEFLSLRPTWSTELSTES*LRGLDM
Trigger: CATGTCCAACCCTCTGAGCAAGCTCTCTGTGCTCAA...CTCTGTAGACCATGTTGGCCTCAAACTCAGAAATTCGCCTGCCTCTGCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp AGATGCTTTTCCTTGTTCCTTGCCTTGGAAGACAACAGGAGCGCCAGTGATCAGACCTCAGCACCATACTaGCCCAGGGTGCCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: RCFSLFLALEDNRSASDQTSAPY*PRVPLS
Trigger: TGACAACGGCACCCTGGGCAAGTATGGTGCTGAGGT...CTGATCACTGGCGCTCCTGTTGTCTTCCAAGGCAAGGAACAAGGAAAAGCATCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CAA 90 bp TCCTCCAGCCTCGGGATGGTGAGGAAATGCTGCATGTTCACTCCGTTTTCAATCTGCCATCTCGACATCTaGCTGACCCTCGGAACCCAT +
Preference number: 5 (lower is better)
Translates to: SSSLGMVRKCCMFTPFSICHLDI*LTLGTH
Trigger: ATGGGTTCCGAGGGTCAGCAAGATGTCGAGATGGCA...GATTGAAAACGGAGTGAACATGCAGCATTTCCTCACCATCCCGAGGCTGGAGGA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CAA 90 bp TGGGAGGCAGAGGCAGGCGAATTTCTGAGTTTGAGGCCAACATGGTCTACAGAGTCTGGAGCTGATGCGTaGGTTCCTTTGAGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: WEAEAGEFLSLRPTWSTESGADA*VPLSKA
Trigger: TGCCTTGCTCAAAGGAACCAACGCATCAGCTCCAGA...CTCTGTAGACCATGTTGGCCTCAAACTCAGAAATTCGCCTGCCTCTGCCTCCCA
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp CACCAGTCCTATATCAATGAGGCTGATGTGGTAATCAGGTGGAAGGTTGCTCTTCCTTTTCCTCTCCCCTaGGTGGTGGCGGCCAGTGTG +
Preference number: 5 (lower is better)
Translates to: HQSYINEADVVIRWKVALPFPLP*VVAASV
Trigger: CACACTGGCCGCCACCACCAAGGGGAGAGGAAAAGG...AAGAGCAACCTTCCACCTGATTACCACATCAGCCTCATTGATATAGGACTGGTG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CAA 90 bp TCCTCCAGCCTCGGGATGGTGAGGAAATGCTGCATGTTCACTCCGTTTTCAATCGTGGTCATGGCAGCCTaGATCAGACCTTTCCCAAAC +
Preference number: 5 (lower is better)
Translates to: SSSLGMVRKCCMFTPFSIVVMAA*IRPFPN
Trigger: GTTTGGGAAAGGTCTGATCAAGGCTGCCATGACCAC...GATTGAAAACGGAGTGAACATGCAGCATTTCCTCACCATCCCGAGGCTGGAGGA
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CAA 90 bp ACTTGGGAGGCAGAGGCAGGCGAATTTCTGAGTTTGAGGCCAACATGGTCTACAGTGGTCATGGCAGCCTaGATCAGACCTTTCCCAAAC +
Preference number: 5 (lower is better)
Translates to: TWEAEAGEFLSLRPTWSTVVMAA*IRPFPN
Trigger: GTTTGGGAAAGGTCTGATCAAGGCTGCCATGACCAC...TGTAGACCATGTTGGCCTCAAACTCAGAAATTCGCCTGCCTCTGCCTCCCAAGT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp AGATGCTTTTCCTTGTTCCTTGCCTTGGAAGACAACAGGAGCGCCAGTGATCAGCCAATCAGGTCTTCCTaGTTCTCCACCATGCCCCAG +
Preference number: 5 (lower is better)
Translates to: RCFSLFLALEDNRSASDQPIRSS*FSTMPQ
Trigger: CTGGGGCATGGTGGAGAACAAGGAAGACCTGATTGG...CTGATCACTGGCGCTCCTGTTGTCTTCCAAGGCAAGGAACAAGGAAAAGCATCT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CAA 90 bp CATGAGGTACTCCAGCACCAGTCCTATATCAATGAGGCTGATGTGGTAATCAGGACCTCAGCACCATACTaGCCCAGGGTGCCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: HEVLQHQSYINEADVVIRTSAPY*PRVPLS
Trigger: TGACAACGGCACCCTGGGCAAGTATGGTGCTGAGGT...CCTGATTACCACATCAGCCTCATTGATATAGGACTGGTGCTGGAGTACCTCATG
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CAA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGACCTCAGCACCATACTaGCCCAGGGTGCCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTTSAPY*PRVPLS
Trigger: TGACAACGGCACCCTGGGCAAGTATGGTGCTGAGGT...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp ATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTTGAGGAGGACCCAGGTTGCCATCTCGACATCTaGCTGACCCTCGGAACCCAT +
Preference number: 5 (lower is better)
Translates to: MELAQKLQALLVLEEDPGCHLDI*LTLGTH
Trigger: ATGGGTTCCGAGGGTCAGCAAGATGTCGAGATGGCA...ACCTGGGTCCTCCTCAAGCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCAT
52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp ATTTTTGGCAGTGGTCAGACCATGTGGGCATGTCATAGTCCACTAGGGTGCCGTTCTGGAGCTGATGCGTaGGTTCCTTTGAGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: IFGSGQTMWACHSPLGCRSGADA*VPLSKA
Trigger: TGCCTTGCTCAAAGGAACCAACGCATCAGCTCCAGA...ACGGCACCCTAGTGGACTATGACATGCCCACATGGTCTGACCACTGCCAAAAAT
52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp AAAGAGTCAAAGAGGCCATGGAGTTGGCTCAGAAGTTACAAGCACTTCTTGTGCTCCTTCTCTGTGGCTTaGGTGTCCACAGGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: KESKRPWSWLRSYKHFLCSFSVA*VSTGGA
Trigger: GGCCCCTCCTGTGGACACCAAAGCCACAGAGAAGGA...GCACAAGAAGTGCTTGTAACTTCTGAGCCAACTCCATGGCCTCTTTGACTCTTT
52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS TCA 90 bp AGATTCTCCAGAGCGCTCACCATCCTGCCAGATAGCTCCTCCAGCTaGGAGAGCCGAAGGTCAACAGTCTGCAGAGAAGTTTTCATGAAA +
Preference number: 5 (lower is better)
Translates to: RFSRALTILPDSSSS*ESRRSTVCREVFMK
Trigger: TTTCATGAAAACTTCTCTGCAGACTGTTGACCTTCGGCTCTCTCAGCTGGAGGAGCTATCTGGCAGGATGGTGAGCGCTCTGGAGAATCT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CCA 90 bp TGTCAGTTTGGGACAGGTGAGGTGAAGAGTTGCATTCTGCACAGGTaGGCTTTTGGGGAAGCACATCAAGGAACCACATGTTACTCTGGG +
Preference number: 5 (lower is better)
Translates to: CQFGTGEVKSCILHR*AFGEAHQGTTCYSG
Trigger: CCCAGAGTAACATGTGGTTCCTTGATGTGCTTCCCCAAAAGCCCACCTGTGCAGAATGCAACTCTTCACCTCACCTGTCCCAAACTGACA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CAA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTATGCGTGTCTGCCTGCTaGGTGTCCTCTCCTGTTGTG +
Preference number: 5 (lower is better)
Translates to: AKSAGSLDSDELISFTGLCVSAC*VSSPVV
Trigger: CACAACAGGAGAGGACACCAAGCAGGCAGACACGCA...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085222.12
CDS-3UTR CAA 90 bp TTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTGAGCGTGGTCATGGCAGCCTaGATCAGACCTTTCCCAAAC +
Preference number: 5 (lower is better)
Translates to: FEARDLVVLCEQAFYLLSVVMAA*IRPFPN
Trigger: GTTTGGGAAAGGTCTGATCAAGGCTGCCATGACCAC...GCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAA
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp ATTTATTGGAGGTTTAACAGGCTGGAGCAAGAAGAAGCAATGTGGCAGGCCAGGTGCCATCTCGACATCTaGCTGACCCTCGGAACCCAT +
Preference number: 5 (lower is better)
Translates to: IYWRFNRLEQEEAMWQARCHLDI*LTLGTH
Trigger: ATGGGTTCCGAGGGTCAGCAAGATGTCGAGATGGCA...CCTGGCCTGCCACATTGCTTCTTCTTGCTCCAGCCTGTTAAACCTCCAATAAAT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CAA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCAGCATCCAGCATGGCTaGCTCCAGGGCATTCACCCA +
Preference number: 5 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEASIQHG*LQGIHP
Trigger: TGGGTGAATGCCCTGGAGCAAGCCATGCTGGATGCT...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp AAAGCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCATGAAGTCCCGGTGCTaGGCTGCCACAGCCAGCTTC +
Preference number: 5 (lower is better)
Translates to: KAKSAGSLDSDELISFTGMKSRC*AATASF
Trigger: GAAGCTGGCTGTGGCAGCCAAGCACCGGGACTTCAT...GCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGCTTT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTACCTGCCCTGTCTAATTaGCTAGGAGCGGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: AKSAGSLDSDELISFTGLPALSN*LGAGSA
Trigger: TGCTGAGCCCGCTCCTAGCAAATTAGACAGGGCAGG...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCCCTGCCCTGTCTAATTaGCTAGGAGCGGGCTCAGCA +
Preference number: 5 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEAPALSN*LGAGSA
Trigger: TGCTGAGCCCGCTCCTAGCAAATTAGACAGGGCAGG...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp TCCTCCAGCCTCGGGATGGTGAGGAAATGCTGCATGTTCACTCCGTTTTCAATCTTGATTGAACCACGCTaGAAGGAGCTGCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: SSSLGMVRKCCMFTPFSILIEPR*KELLIF
Trigger: GAAGATGAGCAGCTCCTTCAAGCGTGGTTCAATCAA...GATTGAAAACGGAGTGAACATGCAGCATTTCCTCACCATCCCGAGGCTGGAGGA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CAA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTCCCATAGGAGTCTGTaGGGTAGCTCTGGGTGTGTT +
Preference number: 5 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTSHRSL*GSSGCV
Trigger: AACACACCCAGAGCTACCCAACAGACTCCTATGGGA...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085222.12
CDS-3UTR CAA 90 bp GGAAATGCTGCATGTTCACTCCGTTTTCAATCAGGAGCTTTACAAAGTCCACCCCCAATCAGGTCTTCCTaGTTCTCCACCATGCCCCAG +
Preference number: 5 (lower is better)
Translates to: GNAACSLRFQSGALQSPPPIRSS*FSTMPQ
Trigger: CTGGGGCATGGTGGAGAACAAGGAAGACCTGATTGG...GGGTGGACTTTGTAAAGCTCCTGATTGAAAACGGAGTGAACATGCAGCATTTCC
50% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CAA 90 bp GATAGGTGGTTAGCAGTAGCTAGCCTCCGGCTTGGGAGGCTGGAGCCATCATGCTGGTCTGATAGACTCTaGTTACATCTTTTCCAATCA +
Preference number: 5 (lower is better)
Translates to: DRWLAVASLRLGRLEPSCWSDRL*LHLFQS
Trigger: TGATTGGAAAAGATGTAACAAGAGTCTATCAGACCA...GCATGATGGCTCCAGCCTCCCAAGCCGGAGGCTAGCTACTGCTAACCACCTATC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTGAGCACAGAGAGCTaGCTCAGAGGGTTGGACATG +
Preference number: 5 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTLSTES*LRGLDM
Trigger: CATGTCCAACCCTCTGAGCAAGCTCTCTGTGCTCAA...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp GGAGCAAGAAGAAGCAATGTGGCAGGCCAGGAGTTAGCTTTGATTTTGATGGAGTTGAGCACAGAGAGCTaGCTCAGAGGGTTGGACATG +
Preference number: 5 (lower is better)
Translates to: GARRSNVAGQELALILMELSTES*LRGLDM
Trigger: CATGTCCAACCCTCTGAGCAAGCTCTCTGTGCTCAA...CTCCATCAAAATCAAAGCTAACTCCTGGCCTGCCACATTGCTTCTTCTTGCTCC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CAA 90 bp TGGGAGGCAGAGGCAGGCGAATTTCTGAGTTTGAGGCCAACATGGTCTACAGAGGCAAGGCAGTTAAAATaGCCATCTCGACATCTTGCT +
Preference number: 5 (lower is better)
Translates to: WEAEAGEFLSLRPTWSTEARQLK*PSRHLA
Trigger: AGCAAGATGTCGAGATGGCAATTTTAACTGCCTTGC...CTCTGTAGACCATGTTGGCCTCAAACTCAGAAATTCGCCTGCCTCTGCCTCCCA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp CATGAGGTACTCCAGCACCAGTCCTATATCAATGAGGCTGATGTGGTAATCAGGTCTGGAGCTGATGCGTaGGTTCCTTTGAGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: HEVLQHQSYINEADVVIRSGADA*VPLSKA
Trigger: TGCCTTGCTCAAAGGAACCAACGCATCAGCTCCAGA...CCTGATTACCACATCAGCCTCATTGATATAGGACTGGTGCTGGAGTACCTCATG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CAA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTCTGGAGCTGATGCGTaGGTTCCTTTGAGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTSGADA*VPLSKA
Trigger: TGCCTTGCTCAAAGGAACCAACGCATCAGCTCCAGA...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp TTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTGAGCATTTTCTGGCTGAGTTaGCCTGGTTCCGACATGAGG +
Preference number: 5 (lower is better)
Translates to: FEARDLVVLCEQAFYLLSIFWLS*PGSDMR
Trigger: CCTCATGTCGGAACCAGGCAAACTCAGCCAGAAAAT...GCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAA
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp CTGCTAGTGTTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACGGAGCGCGTGATCCTTaGAACTTGACATCTCCATTC +
Preference number: 5 (lower is better)
Translates to: LLVFEARDLVVLCEQAFYGARDP*NLTSPF
Trigger: GAATGGAGATGTCAAGTTCAAAGGATCACGCGCTCC...GTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAACACTAGCAG
50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS TCA 90 bp GGATCTCTCGTATTTTCTCCAATGCAAGGCTCACAATGTAGGAGATaGCAATCCATTCTTGGGGTGATGGCCATCCATCCATCCGCACCA +
Preference number: 5 (lower is better)
Translates to: GSLVFSPMQGSQCRR*QSILGVMAIHPSAP
Trigger: TGGTGCGGATGGATGGATGGCCATCACCCCAAGAATGGATTGTCATCTCCTACATTGTGAGCCTTGCATTGGAGAAAATACGAGAGATCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS-3UTR CAA 90 bp GGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGTGTCTTCTGACCCAATCAGGTCTTCCTaGTTCTCCACCATGCCCCAG +
Preference number: 5 (lower is better)
Translates to: GSLDSDELISFTGLVSSDPIRSS*FSTMPQ
Trigger: CTGGGGCATGGTGGAGAACAAGGAAGACCTGATTGG...GTCAGAAGACACTAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp GGAAATGCTGCATGTTCACTCCGTTTTCAATCAGGAGCTTTACAAAGTCCACCCTTGAGCACAGAGAGCTaGCTCAGAGGGTTGGACATG +
Preference number: 5 (lower is better)
Translates to: GNAACSLRFQSGALQSPPLSTES*LRGLDM
Trigger: CATGTCCAACCCTCTGAGCAAGCTCTCTGTGCTCAA...GGGTGGACTTTGTAAAGCTCCTGATTGAAAACGGAGTGAACATGCAGCATTTCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CAA 90 bp GGCAGACATGCAGACATTTGGGGCAGGAAAATATGGGAAACAAACCACATATTTACCTCAGCACCATACTaGCCCAGGGTGCCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: GRHADIWGRKIWETNHIFTSAPY*PRVPLS
Trigger: TGACAACGGCACCCTGGGCAAGTATGGTGCTGAGGT...AAATATGTGGTTTGTTTCCCATATTTTCCTGCCCCAAATGTCTGCATGTCTGCC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp GGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGCCATCTCGACATCTaGCTGACCCTCGGAACCCAT +
Preference number: 5 (lower is better)
Translates to: GLQLYRCMLQHVSCAASVCHLDI*LTLGTH
Trigger: ATGGGTTCCGAGGGTCAGCAAGATGTCGAGATGGCA...AACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCC
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp ATTTTTGGCAGTGGTCAGACCATGTGGGCATGTCATAGTCCACTAGGGTGCCGTGCAAGGCAGTTAAAATaGCCATCTCGACATCTTGCT +
Preference number: 5 (lower is better)
Translates to: IFGSGQTMWACHSPLGCRARQLK*PSRHLA
Trigger: AGCAAGATGTCGAGATGGCAATTTTAACTGCCTTGC...ACGGCACCCTAGTGGACTATGACATGCCCACATGGTCTGACCACTGCCAAAAAT
49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp CATGTTTTCCAGGTCTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCAGATGCGTTGGTTCCTTaGAGCAAGGCAGTTAAAATT +
Preference number: 5 (lower is better)
Translates to: HVFQVSLCSGKHMPQGQPDALVP*SKAVKI
Trigger: AATTTTAACTGCCTTGCTCAAAGGAACCAACGCATC...TGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAGACCTGGAAAACATG
49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp TGGGAGGCAGAGGCAGGCGAATTTCTGAGTTTGAGGCCAACATGGTCTACAGAGGATGCGTTGGTTCCTTaGAGCAAGGCAGTTAAAATT +
Preference number: 5 (lower is better)
Translates to: WEAEAGEFLSLRPTWSTEDALVP*SKAVKI
Trigger: AATTTTAACTGCCTTGCTCAAAGGAACCAACGCATC...CTCTGTAGACCATGTTGGCCTCAAACTCAGAAATTCGCCTGCCTCTGCCTCCCA
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCTCTGGAGCTGATGCGTaGGTTCCTTTGAGCAAGGCA +
Preference number: 5 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEASGADA*VPLSKA
Trigger: TGCCTTGCTCAAAGGAACCAACGCATCAGCTCCAGA...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp TTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTGAGCGACATAACTGCTAAGTaGCTAGTGCTGCTGGCATGT +
Preference number: 5 (lower is better)
Translates to: FEARDLVVLCEQAFYLLSDITAK*LVLLAC
Trigger: ACATGCCAGCAGCACTAGCAACTTAGCAGTTATGTC...GCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp GTGGAAACTGCTTCTGTCAACAGAAGTCAGTTGGGAAGGACAGACAGACACAAATGCACAGGTGGGCTTTaGGGGAAGCACATCAAGGAA +
Preference number: 5 (lower is better)
Translates to: VETASVNRSQLGRTDRHKCTGGL*GKHIKE
Trigger: TTCCTTGATGTGCTTCCCCAAAAGCCCACCTGTGCA...TTTGTGTCTGTCTGTCCTTCCCAACTGACTTCTGTTGACAGAAGCAGTTTCCAC
49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CAA 90 bp TCTCCCTCTGCAGTGGCAAGCATATGCCACAGGGACAACCACTCCTCCTTACGATATTGCCATGAAGTATaGACATTAACCCATCTGTCC +
Preference number: 5 (lower is better)
Translates to: SPSAVASICHRDNHSSLRYCHEV*TLTHLS
Trigger: GGACAGATGGGTTAATGTCAATACTTCATGGCAATA...TCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCAGAGGGAGA
49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS TCA 90 bp GTTCCTTTGAGCAAGGCAGTTAAAATTGCCATCTCGACATCTTGCTaGCCCTCGGAACCCATCCGAAACACAGTGACGAGTTCTTTCTTC +
Preference number: 5 (lower is better)
Translates to: VPLSKAVKIAISTSC*PSEPIRNTVTSSFF
Trigger: GAAGAAAGAACTCGTCACTGTGTTTCGGATGGGTTCCGAGGGTCAGCAAGATGTCGAGATGGCAATTTTAACTGCCTTGCTCAAAGGAAC
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000085222.12
ENSMUST00000177102.8
ENSMUST00000205348.2
ENSMUST00000205731.2
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206706.2
CDS TCA 90 bp CAATGCAAGGCTCACAATGTAGGAGATGACAATCCATTCTTGGGGTaGTGGCCATCCATCCATCCGCACCAGGATGACATAATTGAACAG +
Preference number: 5 (lower is better)
Translates to: QCKAHNVGDDNPFLG*WPSIHPHQDDIIEQ
Trigger: CTGTTCAATTATGTCATCCTGGTGCGGATGGATGGATGGCCATCACCCCAAGAATGGATTGTCATCTCCTACATTGTGAGCCTTGCATTG
48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS CCA 90 bp GGAGAAGTCATCATATGTACGGAATTCCAAAAACAAGATGGTGGGTaGGATAAGGATCCCCATGATGACCTTCAGGCCAGGGTTCTTCCT +
Preference number: 5 (lower is better)
Translates to: GEVIICTEFQKQDGG*DKDPHDDLQARVLP
Trigger: AGGAAGAACCCTGGCCTGAAGGTCATCATGGGGATCCTTATCCCACCCACCATCTTGTTTTTGGAATTCCGTACATATGATGACTTCTCC
48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS-3UTR CAA 90 bp ATCTTCCATTCCCAGAAGCTTAAGTGCTTTCGGCCTCTTAGGGCCAAACAAGTTCCTGATGTGGAGCTCTaGATTGAACCACGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: IFHSQKLKCFRPLRAKQVPDVEL*IEPRLK
Trigger: CTTCAAGCGTGGTTCAATCAAGAGCTCCACATCAGG...AACTTGTTTGGCCCTAAGAGGCCGAAAGCACTTAAGCTTCTGGGAATGGAAGAT
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CAA 90 bp TTGGCAGACATGCAGACATTTGGGGCAGGAAAATATGGGAAACAAACCACATATCCAATCAGGTCTTCCTaGTTCTCCACCATGCCCCAG +
Preference number: 5 (lower is better)
Translates to: LADMQTFGAGKYGKQTTYPIRSS*FSTMPQ
Trigger: CTGGGGCATGGTGGAGAACAAGGAAGACCTGATTGG...ATATGTGGTTTGTTTCCCATATTTTCCTGCCCCAAATGTCTGCATGTCTGCCAA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp TCCTCCAGCCTCGGGATGGTGAGGAAATGCTGCATGTTCACTCCGTTTTCAATCGATGCGTTGGTTCCTTaGAGCAAGGCAGTTAAAATT +
Preference number: 5 (lower is better)
Translates to: SSSLGMVRKCCMFTPFSIDALVP*SKAVKI
Trigger: AATTTTAACTGCCTTGCTCAAAGGAACCAACGCATC...GATTGAAAACGGAGTGAACATGCAGCATTTCCTCACCATCCCGAGGCTGGAGGA
48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CAA 90 bp CTGCTAGTGTTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACTTTTTCTTCTTGCCTTaGGCTGGGGGTTCATCATCT +
Preference number: 5 (lower is better)
Translates to: LLVFEARDLVVLCEQAFYFFFLP*AGGSSS
Trigger: AGATGATGAACCCCCAGCCAAAGGCAAGAAGAAAAA...GTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAACACTAGCAG
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp TTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTGAGCTTCTTCTTTTTCTTCTaGCCTTTGGCTGGGGGTTCA +
Preference number: 5 (lower is better)
Translates to: FEARDLVVLCEQAFYLLSFFFFF*PLAGGS
Trigger: TGAACCCCCAGCCAAAGGCAAGAAGAAAAAGAAGAA...GCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAA
48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGGAGCGCGTGATCCTTaGAACTTGACATCTCCATTC +
Preference number: 5 (lower is better)
Translates to: AKSAGSLDSDELISFTGLGARDP*NLTSPF
Trigger: GAATGGAGATGTCAAGTTCAAAGGATCACGCGCTCC...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp TGCAGTGGCAAGCATATGCCACAGGGACAACCACTCCTCCTTACGAAACAGCTGTATTGCCATGAAGTATaGACATTAACCCATCTGTCC +
Preference number: 5 (lower is better)
Translates to: CSGKHMPQGQPLLLTKQLYCHEV*TLTHLS
Trigger: GGACAGATGGGTTAATGTCAATACTTCATGGCAATA...CAGCTGTTTCGTAAGGAGGAGTGGTTGTCCCTGTGGCATATGCTTGCCACTGCA
48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp GGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGTGTCTTCTGACCCTGATGTGGAGCTCTaGATTGAACCACGCTTGAAG +
Preference number: 5 (lower is better)
Translates to: GSLDSDELISFTGLVSSDPDVEL*IEPRLK
Trigger: CTTCAAGCGTGGTTCAATCAAGAGCTCCACATCAGG...GTCAGAAGACACTAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085222.12
CDS-3UTR CAA 90 bp GGAGCAAGAAGAAGCAATGTGGCAGGCCAGGAGTTAGCTTTGATTTTGATGGAGGCAAGGCAGTTAAAATaGCCATCTCGACATCTTGCT +
Preference number: 5 (lower is better)
Translates to: GARRSNVAGQELALILMEARQLK*PSRHLA
Trigger: AGCAAGATGTCGAGATGGCAATTTTAACTGCCTTGC...CTCCATCAAAATCAAAGCTAACTCCTGGCCTGCCACATTGCTTCTTCTTGCTCC
47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CAA 90 bp TTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACCTACTGAGCGATGCGTTGGTTCCTTaGAGCAAGGCAGTTAAAATT +
Preference number: 5 (lower is better)
Translates to: FEARDLVVLCEQAFYLLSDALVP*SKAVKI
Trigger: AATTTTAACTGCCTTGCTCAAAGGAACCAACGCATC...GCTCAGTAGGTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCATCCTTCTCTGTGGCTTaGGTGTCCACAGGAGGGGCC +
Preference number: 5 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSSFSVA*VSTGGA
Trigger: GGCCCCTCCTGTGGACACCAAAGCCACAGAGAAGGA...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp CTGCTAGTGTTTGAAGCCAGGGACTTGGTTGTACTCTGTGAGCAGGCATTCTACTCTTCTTCCTTTTCTTaGCCATCTTCGTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LLVFEARDLVVLCEQAFYSSSFS*PSSFSL
Trigger: CAAGGAGAACGAAGATGGCAAAGAAAAGGAAGAAGA...GTAGAATGCCTGCTCACAGAGTACAACCAAGTCCCTGGCTTCAAACACTAGCAG
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAACCTCAGCACCATACTaGCCCAGGGTGCCGTTGTCA +
Preference number: 5 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSTSAPY*PRVPLS
Trigger: TGACAACGGCACCCTGGGCAAGTATGGTGCTGAGGT...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp ATCTTCCATTCCCAGAAGCTTAAGTGCTTTCGGCCTCTTAGGGCCAAACAAGTTGCAAGGCAGTTAAAATaGCCATCTCGACATCTTGCT +
Preference number: 5 (lower is better)
Translates to: IFHSQKLKCFRPLRAKQVARQLK*PSRHLA
Trigger: AGCAAGATGTCGAGATGGCAATTTTAACTGCCTTGC...AACTTGTTTGGCCCTAAGAGGCCGAAAGCACTTAAGCTTCTGGGAATGGAAGAT
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CAA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAAGCATCCAGCATGGCTaGCTCCAGGGCATTCACCCA +
Preference number: 5 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSSIQHG*LQGIHP
Trigger: TGGGTGAATGCCCTGGAGCAAGCCATGCTGGATGCT...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp CTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGAAATCTTTGGAATTGTaGTCCAGATCCTGGGAGATG +
Preference number: 5 (lower is better)
Translates to: LLSAGITTVQVYAATRFMKSLEL*SRSWEM
Trigger: CATCTCCCAGGATCTGGACAACAATTCCAAAGATTT...CATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAG
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCAGCCAGCATCTGCATTaGCATCCACATTCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEASQHLH*HPHSLL
Trigger: AAGAAGAGAATGTGGATGCAAATGCAGATGCTGGCT...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp GGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTCCTGGAGCCACACTTaGATTTTCTGGCTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: GLQLYRCMLQHVSCAASVSWSHT*IFWLSL
Trigger: CAAACTCAGCCAGAAAATCAAAGTGTGGCTCCAGGA...AACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCC
46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp ATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCAATCAGGTCTTCCTaGTTCTCCACCATGCCCCAG +
Preference number: 5 (lower is better)
Translates to: ISLTSLCHLVNGSVVMSVPIRSS*FSTMPQ
Trigger: CTGGGGCATGGTGGAGAACAAGGAAGACCTGATTGG...TACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGAT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCATGCCATCTCGACATCTaGCTGACCCTCGGAACCCAT +
Preference number: 5 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSCHLDI*LTLGTH
Trigger: ATGGGTTCCGAGGGTCAGCAAGATGTCGAGATGGCA...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp GGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTGCAAGGCAGTTAAAATaGCCATCTCGACATCTTGCT +
Preference number: 5 (lower is better)
Translates to: GLQLYRCMLQHVSCAASVARQLK*PSRHLA
Trigger: AGCAAGATGTCGAGATGGCAATTTTAACTGCCTTGC...AACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp AACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTTGAAGCCGATGCGTTGGTTCCTTaGAGCAAGGCAGTTAAAATT +
Preference number: 5 (lower is better)
Translates to: NCTGVCCNTFHVLLVFEADALVP*SKAVKI
Trigger: AATTTTAACTGCCTTGCTCAAAGGAACCAACGCATC...GGCTTCAAACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTT
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp AAAGCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCTTCTTCTTTTTCTTCTaGCCTTTGGCTGGGGGTTCA +
Preference number: 5 (lower is better)
Translates to: KAKSAGSLDSDELISFTGFFFFF*PLAGGS
Trigger: TGAACCCCCAGCCAAAGGCAAGAAGAAAAAGAAGAA...GCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGCTTT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp GGATTACAACTGTACAGGTGTATGCTGCAACACGTTTCATGTGCTGCTAGTGTTCCAAAATCTTTGGAATaGTTGTCCAGATCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: GLQLYRCMLQHVSCAASVPKSLE*LSRSWE
Trigger: CTCCCAGGATCTGGACAACAATTCCAAAGATTTTGG...AACACTAGCAGCACATGAAACGTGTTGCAGCATACACCTGTACAGTTGTAATCC
44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAATCCTGGAGCCACACTTaGATTTTCTGGCTGAGTTTG +
Preference number: 5 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKSWSHT*IFWLSL
Trigger: CAAACTCAGCCAGAAAATCAAAGTGTGGCTCCAGGA...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp ATTTATTGGAGGTTTAACAGGCTGGAGCAAGAAGAAGCAATGTGGCAGGCCAGGTGGTCTGATAGACTCTaGTTACATCTTTTCCAATCA +
Preference number: 5 (lower is better)
Translates to: IYWRFNRLEQEEAMWQARWSDRL*LHLFQS
Trigger: TGATTGGAAAAGATGTAACAAGAGTCTATCAGACCA...CCTGGCCTGCCACATTGCTTCTTCTTGCTCCAGCCTGTTAAACCTCCAATAAAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS-3UTR CAA 90 bp CATGAGGTACTCCAGCACCAGTCCTATATCAATGAGGCTGATGTGGTAATCAGGTGGTCTGATAGACTCTaGTTACATCTTTTCCAATCA +
Preference number: 5 (lower is better)
Translates to: HEVLQHQSYINEADVVIRWSDRL*LHLFQS
Trigger: TGATTGGAAAAGATGTAACAAGAGTCTATCAGACCA...CCTGATTACCACATCAGCCTCATTGATATAGGACTGGTGCTGGAGTACCTCATG
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS-3UTR CAA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATTTGAGCACAGAGAGCTaGCTCAGAGGGTTGGACATG +
Preference number: 5 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDLSTES*LRGLDM
Trigger: CATGTCCAACCCTCTGAGCAAGCTCTCTGTGCTCAA...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp GCAAAGAGCGCAGGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGGACCAAGATATTTGTaGACACCAAAGATGTCTAAC +
Preference number: 5 (lower is better)
Translates to: AKSAGSLDSDELISFTGLGPRYL*TPKMSN
Trigger: GTTAGACATCTTTGGTGTCAACAAATATCTTGGTCC...TAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCCTGCGCTCTTTGC
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp TCTGATTCTCCTGAGTGCTGGGATTACAACTGTACAGGTGTATGCTGCAACACGTCAAAGAAGGTATTGTaGAAAACAGCAATCAGTAGG +
Preference number: 5 (lower is better)
Translates to: SDSPECWDYNCTGVCCNTSKKVL*KTAISR
Trigger: CCTACTGATTGCTGTTTTCAACAATACCTTCTTTGA...CGTGTTGCAGCATACACCTGTACAGTTGTAATCCCAGCACTCAGGAGAATCAGA
43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCCGTGATCCTTTGAACTaGACATCTCCATTCTGTCGC +
Preference number: 5 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTRDPLN*TSPFCR
Trigger: GCGACAGAATGGAGATGTCAAGTTCAAAGGATCACG...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCGCAAGGCAGTTAAAATaGCCATCTCGACATCTTGCT +
Preference number: 5 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTARQLK*PSRHLA
Trigger: AGCAAGATGTCGAGATGGCAATTTTAACTGCCTTGC...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp GGCAGTCTTGATAGTGATGAACTAATTAGCTTCACTGGCCTAGTGTCTTCTGACGTTCTCCTTGGATGTTaGATAGGAGAAGTCATCATA +
Preference number: 5 (lower is better)
Translates to: GSLDSDELISFTGLVSSDVLLGC*IGEVII
Trigger: TATGATGACTTCTCCTATCAAACATCCAAGGAGAAC...GTCAGAAGACACTAGGCCAGTGAAGCTAATTAGTTCATCACTATCAAGACTGCC
42% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATATTTTCTGGCTGAGTTaGCCTGGTTCCGACATGAGG +
Preference number: 5 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDIFWLS*PGSDMR
Trigger: CCTCATGTCGGAACCAGGCAAACTCAGCCAGAAAAT...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp CTCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCGACATAACTGCTAAGTaGCTAGTGCTGCTGGCATGT +
Preference number: 5 (lower is better)
Translates to: LYLFNFTVSLSKWLSSDVDITAK*LVLLAC
Trigger: ACATGCCAGCAGCACTAGCAACTTAGCAGTTATGTC...GACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGAG
42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCATTGATTGAACCACGCTaGAAGGAGCTGCTCATCTTC +
Preference number: 5 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSLIEPR*KELLIF
Trigger: GAAGATGAGCAGCTCCTTCAAGCGTGGTTCAATCAA...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000085222.12
CDS-3UTR CAA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAAGTTCTCCTTGGATGTTaGATAGGAGAAGTCATCATA +
Preference number: 5 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKVLLGC*IGEVII
Trigger: TATGATGACTTCTCCTATCAAACATCCAAGGAGAAC...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCTCTTCTTCCTTTTCTTaGCCATCTTCGTTCTCCTTG +
Preference number: 5 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTSSSFS*PSSFSL
Trigger: CAAGGAGAACGAAGATGGCAAAGAAAAGGAAGAAGA...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp CTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTACCAGAATTCACAGATCTTaGTTCCAATGGGAATGCTCC +
Preference number: 5 (lower is better)
Translates to: LFNFTVSLSKWLSSDVSTRIHRS*FQWECS
Trigger: GGAGCATTCCCATTGGAACAAAGATCTGTGAATTCT...GGTACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAG
41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp ATGGCAGCCATCGATGGTCTGGCTGTTGAGTGCTTGGTTTTTGTTTTAATCAAAGGACCAAGATATTTGTaGACACCAAAGATGTCTAAC +
Preference number: 5 (lower is better)
Translates to: MAAIDGLAVECLVFVLIKGPRYL*TPKMSN
Trigger: GTTAGACATCTTTGGTGTCAACAAATATCTTGGTCC...TTTGATTAAAACAAAAACCAAGCACTCAACAGCCAGACCATCGATGGCTGCCAT
41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATCGTGATCCTTTGAACTaGACATCTCCATTCTGTCGC +
Preference number: 5 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDRDPLN*TSPFCR
Trigger: GCGACAGAATGGAGATGTCAAGTTCAAAGGATCACG...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp GGCAGACATGCAGACATTTGGGGCAGGAAAATATGGGAAACAAACCACATATTTTGGTCTGATAGACTCTaGTTACATCTTTTCCAATCA +
Preference number: 5 (lower is better)
Translates to: GRHADIWGRKIWETNHIFWSDRL*LHLFQS
Trigger: TGATTGGAAAAGATGTAACAAGAGTCTATCAGACCA...AAATATGTGGTTTGTTTCCCATATTTTCCTGCCCCAAATGTCTGCATGTCTGCC
40% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS-3UTR CAA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCATTTTTCTTCTTGCCTTaGGCTGGGGGTTCATCATCT +
Preference number: 5 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSFFFLP*AGGSSS
Trigger: AGATGATGAACCCCCAGCCAAAGGCAAGAAGAAAAA...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
40% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATCCAAAATCTTTGGAATaGTTGTCCAGATCCTGGGAG +
Preference number: 5 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDPKSLE*LSRSWE
Trigger: CTCCCAGGATCTGGACAACAATTCCAAAGATTTTGG...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATAGCCAGCATCTGCATTaGCATCCACATTCTCTTCTT +
Preference number: 5 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDSQHLH*HPHSLL
Trigger: AAGAAGAGAATGTGGATGCAAATGCAGATGCTGGCT...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAAAATCTTTGGAATTGTaGTCCAGATCCTGGGAGATG +
Preference number: 5 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSKSLEL*SRSWEM
Trigger: CATCTCCCAGGATCTGGACAACAATTCCAAAGATTT...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp ATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCAGTAAGAATTCACAGATCTTaGTTCCAATGGGAATGCTCC +
Preference number: 5 (lower is better)
Translates to: ISLTSLCHLVNGSVVMSVRIHRS*FQWECS
Trigger: GGAGCATTCCCATTGGAACAAAGATCTGTGAATTCT...TACTGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGAT
39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp TCTATCTCTTTAACTTCACTGTGTCACTTAGTAAATGGCTCAGTAGTGATGTCATGGTCTGATAGACTCTaGTTACATCTTTTCCAATCA +
Preference number: 5 (lower is better)
Translates to: SISLTSLCHLVNGSVVMSWSDRL*LHLFQS
Trigger: TGATTGGAAAAGATGTAACAAGAGTCTATCAGACCA...TGACATCACTACTGAGCCATTTACTAAGTGACACAGTGAAGTTAAAGAGATAGA
37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS-3UTR CAA 90 bp ATGTATTTCCTAAACTTGATAATGTTTTGGATGGTCAAGATGGCAGCCATCGATTCAAAGAAGGTATTGTaGAAAACAGCAATCAGTAGG +
Preference number: 5 (lower is better)
Translates to: MYFLNLIMFWMVKMAAIDSKKVL*KTAISR
Trigger: CCTACTGATTGCTGTTTTCAACAATACCTTCTTTGA...ATCGATGGCTGCCATCTTGACCATCCAAAACATTATCAAGTTTAGGAAATACAT
37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS CCA 72 bp TTCAAGGGCGAGCCGGCTGCGGCCTGGCGTGGCAGGTaGGCTGGGGCCAGGGGTGTGGTGCAGGTTGCTGGG +
Preference number: 6 (lower is better)
Translates to: FKGEPAAAWRGR*AGARGVVQVAG
Trigger: CCCAGCAACCTGCACCACACCCCTGGCCCCAGCCCACCTGCCACGCCAGGCCGCAGCCGGCTCGCCCTTGAA
74% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 72 bp CGGAGATGCCAGGGTCCGATCCAGGTCTCAGCTCTGTaGTCAAGGGACCTTCAAGGGCGAGCCGGCTGCGGC +
Preference number: 6 (lower is better)
Translates to: RRCQGPIQVSAL*SRDLQGRAGCG
Trigger: GCCGCAGCCGGCTCGCCCTTGAAGGTCCCTTGAGCACAGAGCTGAGACCTGGATCGGACCCTGGCATCTCCG
67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 72 bp GCCACCAAGGCCTTCGCCATGCACTCTTCCCCACGCTaGCACAGGAAGACCGCCATCTTCTGGCGCTTCATG +
Preference number: 6 (lower is better)
Translates to: ATKAFAMHSSPR*HRKTAIFWRFM
Trigger: CATGAAGCGCCAGAAGATGGCGGTCTTCCTGTGGCAGCGTGGGGAAGAGTGCATGGCGAAGGCCTTGGTGGC
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS GCA 72 bp TCTCGGAGGACTCGTGGGCCATGGCCTTGTAGAGCTTaGAGGCCACCAAGGCCTTCGCCATGCACTCTTCCC +
Preference number: 6 (lower is better)
Translates to: SRRTRGPWPCRA*RPPRPSPCTLP
Trigger: GGGAAGAGTGCATGGCGAAGGCCTTGGTGGCCTGCAAGCTCTACAAGGCCATGGCCCACGAGTCCTCCGAGA
62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS GCA 72 bp CTTGTGACCCGGATGCGCTCGTCGCTGGACGACTGCTaGTCATCCTCCTTTTCCCGGAAGTGCTCCTGCACG +
Preference number: 6 (lower is better)
Translates to: LVTRMRSSLDDC*SSSFSRKCSCT
Trigger: CGTGCAGGAGCACTTCCGGGAAAAGGAGGATGAGCAGCAGTCGTCCAGCGACGAGCGCATCCGGGTCACAAG
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
ENSMUST00000206848.2
CDS GCA 72 bp TCGCTTGTGACCCGGATGCGCTCGTCGCTGGACGACTaGTGCTCATCCTCCTTTTCCCGGAAGTGCTCCTGC +
Preference number: 6 (lower is better)
Translates to: SLVTRMRSSLDD*CSSSFSRKCSC
Trigger: GCAGGAGCACTTCCGGGAAAAGGAGGATGAGCAGCAGTCGTCCAGCGACGAGCGCATCCGGGTCACAAGCGA
62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 5 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
ENSMUST00000206848.2
CDS CAA 90 bp GTGTGTTTGCTGACAGACCATTTCCCGGACTGCGTGTCTGCCTGCTaGGTGTCCTCTCCTGTTGTGCTGGGAGCCCCACTCGGCAGAGGG +
Preference number: 6 (lower is better)
Translates to: VCLLTDHFPDCVSAC*VSSPVVLGAPLGRG
Trigger: CCCTCTGCCGAGTGGGGCTCCCAGCACAACAGGAGAGGACACCAAGCAGGCAGACACGCAGTCCGGGAAATGGTCTGTCAGCAAACACAC
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000205348.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS TCA 72 bp AATGGTAGCGGTACAAGCTGTAGCCGTCGGCACTGTTaGTGCTGCTCTGCCGCAGCAGGTAGGTGGCCTCGC +
Preference number: 6 (lower is better)
Translates to: NGSGTSCSRRHC*CCSAAAGRWPR
Trigger: GCGAGGCCACCTACCTGCTGCGGCAGAGCAGCATCAACAGTGCCGACGGCTACAGCTTGTACCGCTACCATT
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 72 bp CTGCCGCAGCAGGTAGGTGGCCTCGCATTCGGAGGATaGTCGAGATCGAGCCTGGATCAGATCAGACCTGTC +
Preference number: 6 (lower is better)
Translates to: LPQQVGGLAFGG*SRSSLDQIRPV
Trigger: GACAGGTCTGATCTGATCCAGGCTCGATCTCGAGCATCCTCCGAATGCGAGGCCACCTACCTGCTGCGGCAG
61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CCA 72 bp TGGCGCTTCATGAGCACGGCCCATACCATGAGCTCATaGAACGGGTACTGGAACCTACTCACGGCGGGGTCG +
Preference number: 6 (lower is better)
Translates to: WRFMSTAHTMSS*NGYWNLLTAGS
Trigger: CGACCCCGCCGTGAGTAGGTTCCAGTACCCGTTCCATGAGCTCATGGTATGGGCCGTGCTCATGAAGCGCCA
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS CAA 72 bp CTGACAGACCATTTCCCGGACTGCGTGTCTGCCTGCTaGGTGTCCTCTCCTGTTGTGCTGGGAGCCCCACTC +
Preference number: 6 (lower is better)
Translates to: LTDHFPDCVSAC*VSSPVVLGAPL
Trigger: GAGTGGGGCTCCCAGCACAACAGGAGAGGACACCAAGCAGGCAGACACGCAGTCCGGGAAATGGTCTGTCAG
61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000205348.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 72 bp TTGCTGACAGACCATTTCCCGGACTGCGTGTCTGCCTaGTTGGTGTCCTCTCCTGTTGTGCTGGGAGCCCCA +
Preference number: 6 (lower is better)
Translates to: LLTDHFPDCVSA*LVSSPVVLGAP
Trigger: TGGGGCTCCCAGCACAACAGGAGAGGACACCAAGCAGGCAGACACGCAGTCCGGGAAATGGTCTGTCAGCAA
60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000205348.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 72 bp CGATGCCTGCCAGATTCTCCAGAGCGCTCACCATCCTaGCAGATAGCTCCTCCAGCTGAGAGAGCCGAAGGT +
Preference number: 6 (lower is better)
Translates to: RCLPDSPERSPS*QIAPPAERAEG
Trigger: ACCTTCGGCTCTCTCAGCTGGAGGAGCTATCTGGCAGGATGGTGAGCGCTCTGGAGAATCTGGCAGGCATCG
60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 72 bp TCCACCCGATCTAGGACAAGAGCATCCAGCATGGCTTaGTCCAGGGCATTCACCGGCCAGTGTGGGCCAAAG +
Preference number: 6 (lower is better)
Translates to: STRSRTRASSMA*SRAFTGQCGPK
Trigger: CTTTGGCCCACACTGGCCGGTGAATGCCCTGGAGCAAGCCATGCTGGATGCTCTTGTCCTAGATCGGGTGGA
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 1 transcripts:
ENSMUST00000205994.2
CDS CCA 72 bp CAGTTGAGTGCCTGTAACACCCGCTGCGTTCAGACTTaGTGCAGCTTCCGTGCTCTTGAAATCCGCCCGCGG +
Preference number: 6 (lower is better)
Translates to: QLSACNTRCVQT*CSFRALEIRPR
Trigger: CCGCGGGCGGATTTCAAGAGCACGGAAGCTGCACCAAGTCTGAACGCAGCGGGTGTTACAGGCACTCAACTG
60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 72 bp GTGTTTGCTGACAGACCATTTCCCGGACTGCGTGTCTaGCTGCTTGGTGTCCTCTCCTGTTGTGCTGGGAGC +
Preference number: 6 (lower is better)
Translates to: VFADRPFPGLRV*LLGVLSCCAGS
Trigger: GCTCCCAGCACAACAGGAGAGGACACCAAGCAGGCAGACACGCAGTCCGGGAAATGGTCTGTCAGCAAACAC
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000205348.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 72 bp TTGAGTGCCTGTAACACCCGCTGCGTTCAGACTTGGTaGAGCTTCCGTGCTCTTGAAATCCGCCCGCGGATC +
Preference number: 6 (lower is better)
Translates to: LSACNTRCVQTW*SFRALEIRPRI
Trigger: GATCCGCGGGCGGATTTCAAGAGCACGGAAGCTGCACCAAGTCTGAACGCAGCGGGTGTTACAGGCACTCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CCA 72 bp CCTATAGCACAGAGCCGGCCTCTGGACTTGGAGGAGTaGTCTTTCAAGGCATCCCCCACATGGCTGACGACA +
Preference number: 6 (lower is better)
Translates to: PIAQSRPLDLEE*SFKASPTWLTT
Trigger: TGTCGTCAGCCATGTGGGGGATGCCTTGAAAGACCACTCCTCCAAGTCCAGAGGCCGGCTCTGTGCTATAGG
58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000085222.12
ENSMUST00000177102.8
ENSMUST00000205348.2
ENSMUST00000205731.2
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206706.2
CDS CCA 72 bp GTGGCCTCGCATTCGGAGGATGCTCGAGATCGAGCCTaGATCAGATCAGACCTGTCGATGCCTGCCAGATTC +
Preference number: 6 (lower is better)
Translates to: VASHSEDARDRA*IRSDLSMPARF
Trigger: GAATCTGGCAGGCATCGACAGGTCTGATCTGATCCAGGCTCGATCTCGAGCATCCTCCGAATGCGAGGCCAC
58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CCA 72 bp AAGCTCGTCTTGCGAGGCTGCTTCGGACACGATGTATaGGATGTCTGTGCTGCGGGAGCGCGTGATCCTTTG +
Preference number: 6 (lower is better)
Translates to: KLVLRGCFGHDV*DVCAAGARDPL
Trigger: CAAAGGATCACGCGCTCCCGCAGCACAGACATCCCATACATCGTGTCCGAAGCAGCCTCGCAAGACGAGCTT
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CCA 72 bp TTCCTTTTCCTCTCCCCTTGGTGGTGGCGGCCAGTGTaGGCCAAAGACGAAGATCTGGCTTCGCGCTATGTC +
Preference number: 6 (lower is better)
Translates to: FLFLSPWWWRPV*AKDEDLASRYV
Trigger: GACATAGCGCGAAGCCAGATCTTCGTCTTTGGCCCACACTGGCCGCCACCACCAAGGGGAGAGGAAAAGGAA
58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000205348.2
CDS CAA 72 bp TTGCTAGTGCTGCTGGCATGTCCTGCCCTGTCTAATTaGCTAGGAGCGGGCTCAGCACTCCTAGGACGGCCA +
Preference number: 6 (lower is better)
Translates to: LLVLLACPALSN*LGAGSALLGRP
Trigger: TGGCCGTCCTAGGAGTGCTGAGCCCGCTCCTAGCAAATTAGACAGGGCAGGACATGCCAGCAGCACTAGCAA
58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS TCA 72 bp GGCCCACGACAGGTACACCCTGGCCCAGCCTTGTGTTaGTCTTCTGCAGGGAGATGTGTTTTTCCAGCTGTC +
Preference number: 6 (lower is better)
Translates to: GPRQVHPGPALC*SSAGRCVFPAV
Trigger: GACAGCTGGAAAAACACATCTCCCTGCAGAAGATCAACACAAGGCTGGGCCAGGGTGTACCTGTCGTGGGCC
57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000085222.12
ENSMUST00000177102.8
ENSMUST00000205348.2
ENSMUST00000205731.2
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206706.2
CDS GCA 72 bp CTCTGGGTGTGTTTGCTGACAGACCATTTCCCGGACTaGGTGTCTGCCTGCTTGGTGTCCTCTCCTGTTGTG +
Preference number: 6 (lower is better)
Translates to: LWVCLLTDHFPD*VSACLVSSPVV
Trigger: CACAACAGGAGAGGACACCAAGCAGGCAGACACGCAGTCCGGGAAATGGTCTGTCAGCAAACACACCCAGAG
57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000205348.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 72 bp AGATCGAGCCTGGATCAGATCAGACCTGTCGATGCCTaGCAGATTCTCCAGAGCGCTCACCATCCTGCCAGA +
Preference number: 6 (lower is better)
Translates to: RSSLDQIRPVDA*QILQSAHHPAR
Trigger: TCTGGCAGGATGGTGAGCGCTCTGGAGAATCTGGCAGGCATCGACAGGTCTGATCTGATCCAGGCTCGATCT
57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS TCA 72 bp CATAGGAGTCTGTTGGGTAGCTCTGGGTGTGTTTGCTaGCAGACCATTTCCCGGACTGCGTGTCTGCCTGCT +
Preference number: 6 (lower is better)
Translates to: HRSLLGSSGCVC*QTISRTACLPA
Trigger: AGCAGGCAGACACGCAGTCCGGGAAATGGTCTGTCAGCAAACACACCCAGAGCTACCCAACAGACTCCTATG
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000205348.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS TCA 72 bp AGAGCGCTCACCATCCTGCCAGATAGCTCCTCCAGCTaGGAGAGCCGAAGGTCAACAGTCTGCAGAGAAGTT +
Preference number: 6 (lower is better)
Translates to: RALTILPDSSSS*ESRRSTVCREV
Trigger: AACTTCTCTGCAGACTGTTGACCTTCGGCTCTCTCAGCTGGAGGAGCTATCTGGCAGGATGGTGAGCGCTCT
56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS TCA 72 bp AGAGAGCAGGCTCCTCAAACAGAAGCTCCTCGCCATTaGAATGGTAGCGGTACAAGCTGTAGCCGTCGGCAC +
Preference number: 6 (lower is better)
Translates to: REQAPQTEAPRH*NGSGTSCSRRH
Trigger: GTGCCGACGGCTACAGCTTGTACCGCTACCATTTCAATGGCGAGGAGCTTCTGTTTGAGGAGCCTGCTCTCT
56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS TCA 72 bp CAGGGCAGAGGTGGGGTGATGTCAGTTTGGGACAGGTaGGGTGAAGAGTTGCATTCTGCACAGGTGGGCTTT +
Preference number: 6 (lower is better)
Translates to: QGRGGVMSVWDR*GEELHSAQVGF
Trigger: AAAGCCCACCTGTGCAGAATGCAACTCTTCACCTCACCTGTCCCAAACTGACATCACCCCACCTCTGCCCTG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS GCA 72 bp TGTGTGCGAAGGACAAAATGTCAGAGGCACGTCCACTaGCATCGCAAACCACCACAGGGACAGGAGGGTCTT +
Preference number: 6 (lower is better)
Translates to: CVRRTKCQRHVH*HRKPPQGQEGL
Trigger: AAGACCCTCCTGTCCCTGTGGTGGTTTGCGATGGCAGTGGACGTGCCTCTGACATTTTGTCCTTCGCACACA
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000085222.12
ENSMUST00000177102.8
ENSMUST00000205348.2
ENSMUST00000205731.2
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206706.2
CDS CCA 72 bp CCACCTTCTACCACTAGGCCCACGACAGGTACACCCTaGCCCAGCCATCTTTTCCAATCAGGTCTTCCTTGT +
Preference number: 6 (lower is better)
Translates to: PPSTTRPTTGTP*PSHLFQSGLPC
Trigger: ACAAGGAAGACCTGATTGGAAAAGATGGCTGGGCCAGGGTGTACCTGTCGTGGGCCTAGTGGTAGAAGGTGG
56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 1 transcripts:
ENSMUST00000205684.2
CDS CAA 72 bp AGGCCCACGACAGGTACACCCTGGCCCAGCCTTGTGTaGATCTTCTGCAGGGAGATGTGTTTTTCCAGCTGT +
Preference number: 6 (lower is better)
Translates to: RPTTGTPWPSLV*IFCREMCFSSC
Trigger: ACAGCTGGAAAAACACATCTCCCTGCAGAAGATCAACACAAGGCTGGGCCAGGGTGTACCTGTCGTGGGCCT
56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 7 transcripts:
ENSMUST00000085222.12
ENSMUST00000177102.8
ENSMUST00000205348.2
ENSMUST00000205731.2
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206706.2
CDS CAA 90 bp TGGTCCCGCAGGGACTCGTTTATGACTCCTCCTTCGTCGCAGTATTaGTGTGCGAAGGACAAAATGTCAGAGGCACGTCCACTGCCATCG +
Preference number: 6 (lower is better)
Translates to: WSRRDSFMTPPSSQY*CAKDKMSEARPLPS
Trigger: CGATGGCAGTGGACGTGCCTCTGACATTTTGTCCTTCGCACACAAATACTGCGACGAAGGAGGAGTCATAAACGAGTCCCTGCGGGACCA
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000085222.12
ENSMUST00000177102.8
ENSMUST00000205348.2
ENSMUST00000205731.2
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206706.2
CDS CAA 90 bp CTGAGGATCCAGAAGAGATCCTCTGTGCTCATCTTCAAGCTCGTCTaGCGAGGCTGCTTCGGACACGATGTATGGGATGTCTGTGCTGCG +
Preference number: 6 (lower is better)
Translates to: LRIQKRSSVLIFKLV*RGCFGHDVWDVCAA
Trigger: CGCAGCACAGACATCCCATACATCGTGTCCGAAGCAGCCTCGCAAGACGAGCTTGAAGATGAGCACAGAGGATCTCTTCTGGATCCTCAG
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 72 bp GTGGTGCAGGTTGCTGGGCTGGTCCAGGTGCGACTTTaGATCCTCATCCTTCACACGAAAGGAGTAGGTTTT +
Preference number: 6 (lower is better)
Translates to: VVQVAGLVQVRL*ILILHTKGVGF
Trigger: AAAACCTACTCCTTTCGTGTGAAGGATGAGGATGCAAAGTCGCACCTGGACCAGCCCAGCAACCTGCACCAC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 72 bp GCTTTCGACAGTCAGTTGAGTGCCTGTAACACCCGCTaGGTTCAGACTTGGTGCAGCTTCCGTGCTCTTGAA +
Preference number: 6 (lower is better)
Translates to: AFDSQLSACNTR*VQTWCSFRALE
Trigger: TTCAAGAGCACGGAAGCTGCACCAAGTCTGAACGCAGCGGGTGTTACAGGCACTCAACTGACTGTCGAAAGC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 72 bp GGTAACAAGGGAGTCTCTTCCGGAGAACTTGGGGAATaGCAGTCCAGAACTCTGAAGACACACGGGCAAGGA +
Preference number: 6 (lower is better)
Translates to: GNKGVSSGELGE*QSRTLKTHGQG
Trigger: TCCTTGCCCGTGTGTCTTCAGAGTTCTGGACTGGCATTCCCCAAGTTCTCCGGAAGAGACTCCCTTGTTACC
54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 2 transcripts:
ENSMUST00000205731.2
ENSMUST00000206706.2
CDS CAA 72 bp TGTGGTGCAGGTTGCTGGGCTGGTCCAGGTGCGACTTaGCATCCTCATCCTTCACACGAAAGGAGTAGGTTT +
Preference number: 6 (lower is better)
Translates to: CGAGCWAGPGAT*HPHPSHERSRF
Trigger: AAACCTACTCCTTTCGTGTGAAGGATGAGGATGCAAAGTCGCACCTGGACCAGCCCAGCAACCTGCACCACA
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CAA 72 bp GATGTCTGTGCTGCGGGAGCGCGTGATCCTTTGAACTaGACATCTCCATTCTGTCGCGTTCCATGCTTGGTC +
Preference number: 6 (lower is better)
Translates to: DVCAAGARDPLN*TSPFCRVPCLV
Trigger: GACCAAGCATGGAACGCGACAGAATGGAGATGTCAAGTTCAAAGGATCACGCGCTCCCGCAGCACAGACATC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CAA 72 bp GTATGGGATGTCTGTGCTGCGGGAGCGCGTGATCCTTaGAACTTGACATCTCCATTCTGTCGCGTTCCATGC +
Preference number: 6 (lower is better)
Translates to: VWDVCAAGARDP*NLTSPFCRVPC
Trigger: GCATGGAACGCGACAGAATGGAGATGTCAAGTTCAAAGGATCACGCGCTCCCGCAGCACAGACATCCCATAC
54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CAA 90 bp CGTCCACTGCCATCGCAAACCACCACAGGGACAGGAGGGTCTTCTTaGAGATACTCCAGGACGATAGAAACCACGTTAGGACCACCTTCT +
Preference number: 6 (lower is better)
Translates to: RPLPSQTTTGTGGSS*RYSRTIETTLGPPS
Trigger: AGAAGGTGGTCCTAACGTGGTTTCTATCGTCCTGGAGTATCTCAAAGAAGACCCTCCTGTCCCTGTGGTGGTTTGCGATGGCAGTGGACG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000085222.12
ENSMUST00000177102.8
ENSMUST00000205348.2
ENSMUST00000205731.2
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206706.2
CDS CAA 90 bp GGACACGATGTATGGGATGTCTGTGCTGCGGGAGCGCGTGATCCTTaGAACTTGACATCTCCATTCTGTCGCGTTCCATGCTTGGTCCAT +
Preference number: 6 (lower is better)
Translates to: GHDVWDVCAAGARDP*NLTSPFCRVPCLVH
Trigger: ATGGACCAAGCATGGAACGCGACAGAATGGAGATGTCAAGTTCAAAGGATCACGCGCTCCCGCAGCACAGACATCCCATACATCGTGTCC
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CAA 90 bp ACTGCTAAGTTGCTAGTGCTGCTGGCATGTCCTGCCCTGTCTAATTaGCTAGGAGCGGGCTCAGCACTCCTAGGACGGCCATGTAAACTT +
Preference number: 6 (lower is better)
Translates to: TAKLLVLLACPALSN*LGAGSALLGRPCKL
Trigger: AAGTTTACATGGCCGTCCTAGGAGTGCTGAGCCCGCTCCTAGCAAATTAGACAGGGCAGGACATGCCAGCAGCACTAGCAACTTAGCAGT
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CCA 72 bp AGCTGGCCAAAATCTTTGGAATTGTTGTCCAGATCCTaGGAGATGTCATCCACCAGCTCGCTCTCGGAGGAC +
Preference number: 6 (lower is better)
Translates to: SWPKSLELLSRS*EMSSTSSLSED
Trigger: GTCCTCCGAGAGCGAGCTGGTGGATGACATCTCCCAGGATCTGGACAACAATTCCAAAGATTTTGGCCAGCT
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS CCA 72 bp CCAGTTTCCAGGAAGGCTTCTCCTCCGGATGCAAGATaGCTTGCCGAGCCACTCCAAAACTCATCAGTACAA +
Preference number: 6 (lower is better)
Translates to: PVSRKASPPDAR*LAEPLQNSSVQ
Trigger: TTGTACTGATGAGTTTTGGAGTGGCTCGGCAAGCCATCTTGCATCCGGAGGAGAAGCCTTCCTGGAAACTGG
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS CCA 72 bp GGGACAGGTGAGGTGAAGAGTTGCATTCTGCACAGGTaGGCTTTTGGGGAAGCACATCAAGGAACCACATGT +
Preference number: 6 (lower is better)
Translates to: GTGEVKSCILHR*AFGEAHQGTTC
Trigger: ACATGTGGTTCCTTGATGTGCTTCCCCAAAAGCCCACCTGTGCAGAATGCAACTCTTCACCTCACCTGTCCC
53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS CAA 72 bp TTTCCAGGAAGGCTTCTCCTCCGGATGCAAGATGGCTaGCCGAGCCACTCCAAAACTCATCAGTACAACCAG +
Preference number: 6 (lower is better)
Translates to: FPGRLLLRMQDG*PSHSKTHQYNQ
Trigger: CTGGTTGTACTGATGAGTTTTGGAGTGGCTCGGCAAGCCATCTTGCATCCGGAGGAGAAGCCTTCCTGGAAA
53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS CAA 72 bp CAGAAGAGATCCTCTGTGCTCATCTTCAAGCTCGTCTaGCGAGGCTGCTTCGGACACGATGTATGGGATGTC +
Preference number: 6 (lower is better)
Translates to: QKRSSVLIFKLV*RGCFGHDVWDV
Trigger: GACATCCCATACATCGTGTCCGAAGCAGCCTCGCAAGACGAGCTTGAAGATGAGCACAGAGGATCTCTTCTG
53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS GCA 72 bp AGAAGAGATCCTCTGTGCTCATCTTCAAGCTCGTCTTaGGAGGCTGCTTCGGACACGATGTATGGGATGTCT +
Preference number: 6 (lower is better)
Translates to: RRDPLCSSSSSS*EAASDTMYGMS
Trigger: AGACATCCCATACATCGTGTCCGAAGCAGCCTCGCAAGACGAGCTTGAAGATGAGCACAGAGGATCTCTTCT
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CCA 72 bp TTTTGGGGAAGCACATCAAGGAACCACATGTTACTCTaGGAGGCACAGGACACTGTGTGTCTGCTGAGCTCT +
Preference number: 6 (lower is better)
Translates to: FWGSTSRNHMLL*EAQDTVCLLSS
Trigger: AGAGCTCAGCAGACACACAGTGTCCTGTGCCTCCCAGAGTAACATGTGGTTCCTTGATGTGCTTCCCCAAAA
51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt.
Matches the following 1 transcripts:
ENSMUST00000177102.8
CDS CAA 72 bp CCATCGCAAACCACCACAGGGACAGGAGGGTCTTCTTaGAGATACTCCAGGACGATAGAAACCACGTTAGGA +
Preference number: 6 (lower is better)
Translates to: PSQTTTGTGGSS*RYSRTIETTLG
Trigger: TCCTAACGTGGTTTCTATCGTCCTGGAGTATCTCAAAGAAGACCCTCCTGTCCCTGTGGTGGTTTGCGATGG
51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 7 transcripts:
ENSMUST00000085222.12
ENSMUST00000177102.8
ENSMUST00000205348.2
ENSMUST00000205731.2
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206706.2
CDS TCA 72 bp AGCAAGGCAGTTAAAATTGCCATCTCGACATCTTGCTaGCCCTCGGAACCCATCCGAAACACAGTGACGAGT +
Preference number: 6 (lower is better)
Translates to: SKAVKIAISTSC*PSEPIRNTVTS
Trigger: ACTCGTCACTGTGTTTCGGATGGGTTCCGAGGGTCAGCAAGATGTCGAGATGGCAATTTTAACTGCCTTGCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000085222.12
ENSMUST00000177102.8
ENSMUST00000205348.2
ENSMUST00000205731.2
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206706.2
CDS TCA 72 bp GCTCACAATGTAGGAGATGACAATCCATTCTTGGGGTaGTGGCCATCCATCCATCCGCACCAGGATGACATA +
Preference number: 6 (lower is better)
Translates to: AHNVGDDNPFLG*WPSIHPHQDDI
Trigger: TATGTCATCCTGGTGCGGATGGATGGATGGCCATCACCCCAAGAATGGATTGTCATCTCCTACATTGTGAGC
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS TCA 72 bp TCTCCATTCTGTCGCGTTCCATGCTTGGTCCATGATTaGACTGTACTCTGCACTCCAGTTGCTAAGACCTCG +
Preference number: 6 (lower is better)
Translates to: SPFCRVPCLVHD*TVLCTPVAKTS
Trigger: CGAGGTCTTAGCAACTGGAGTGCAGAGTACAGTTCAATCATGGACCAAGCATGGAACGCGACAGAATGGAGA
50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CAA 72 bp AGGGACTCGTTTATGACTCCTCCTTCGTCGCAGTATTaGTGTGCGAAGGACAAAATGTCAGAGGCACGTCCA +
Preference number: 6 (lower is better)
Translates to: RDSFMTPPSSQY*CAKDKMSEARP
Trigger: TGGACGTGCCTCTGACATTTTGTCCTTCGCACACAAATACTGCGACGAAGGAGGAGTCATAAACGAGTCCCT
50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 7 transcripts:
ENSMUST00000085222.12
ENSMUST00000177102.8
ENSMUST00000205348.2
ENSMUST00000205731.2
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206706.2
CDS CCA 72 bp TGGTGTCGTAGGAGACTCGGATGTACATGGCTTTATTaGAGTAACCCCCACCCTGGAATTCAAGAATCCCAT +
Preference number: 6 (lower is better)
Translates to: WCRRRLGCTWLY*SNPHPGIQESH
Trigger: ATGGGATTCTTGAATTCCAGGGTGGGGGTTACTCCAATAAAGCCATGTACATCCGAGTCTCCTACGACACCA
49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000205348.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS TCA 72 bp CTTCCTCATCATAGAGATTCTCACCACAAGGAGGGTTaGTTTCCATGGCGTAGAGGTCTATCTGGTCTGCAA +
Preference number: 6 (lower is better)
Translates to: LPHHRDSHHKEG*FPWRRGLSGLQ
Trigger: TTGCAGACCAGATAGACCTCTACGCCATGGAAATCAACCCTCCTTGTGGTGAGAATCTCTATGATGAGGAAG
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 2 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
CDS CCA 72 bp ATCATATGTACGGAATTCCAAAAACAAGATGGTGGGTaGGATAAGGATCCCCATGATGACCTTCAGGCCAGG +
Preference number: 6 (lower is better)
Translates to: IICTEFQKQDGG*DKDPHDDLQAR
Trigger: CCTGGCCTGAAGGTCATCATGGGGATCCTTATCCCACCCACCATCTTGTTTTTGGAATTCCGTACATATGAT
47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS CAA 72 bp GCTTGGTCCATGATTGAACTGTACTCTGCACTCCAGTaGCTAAGACCTCGGACTAGCTTTCTTCCTTCAGTA +
Preference number: 6 (lower is better)
Translates to: AWSMIELYSALQ*LRPRTSFLPSV
Trigger: TACTGAAGGAAGAAAGCTAGTCCGAGGTCTTAGCAACTGGAGTGCAGAGTACAGTTCAATCATGGACCAAGC
47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CAA 72 bp TTTTGTCCCTCTGGAACAACTGACATAACTGCTAAGTaGCTAGTGCTGCTGGCATGTCCTGCCCTGTCTAAT +
Preference number: 6 (lower is better)
Translates to: FCPSGTTDITAK*LVLLACPALSN
Trigger: ATTAGACAGGGCAGGACATGCCAGCAGCACTAGCAACTTAGCAGTTATGTCAGTTGTTCCAGAGGGACAAAA
47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 4 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
ENSMUST00000206314.2
CDS CAA 90 bp ACGTCGATGTCAATCTCTTCCTCTTTCTTCTTCTTCTTTTTCTTCTaGCCTTTGGCTGGGGGTTCATCATCTTCCATTCCCAGAAGCTTA +
Preference number: 6 (lower is better)
Translates to: TSMSISSSFFFFFFF*PLAGGSSSSIPRSL
Trigger: TAAGCTTCTGGGAATGGAAGATGATGAACCCCCAGCCAAAGGCAAGAAGAAAAAGAAGAAGAAGAAAGAGGAAGAGATTGACATCGACGT
43% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS CCA 72 bp TGGGCGCATTATAGAATTCACAGATCTTTGTTCCAATaGGAATGCTCCTCTGCTTTTTGTGCTCATTCTCCT +
Preference number: 6 (lower is better)
Translates to: WAHYRIHRSLFQ*ECSSAFCAHSP
Trigger: AGGAGAATGAGCACAAAAAGCAGAGGAGCATTCCCATTGGAACAAAGATCTGTGAATTCTATAATGCGCCCA
43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS CAA 90 bp ATGTCAATCTCTTCCTCTTTCTTCTTCTTCTTTTTCTTCTTGCCTTaGGCTGGGGGTTCATCATCTTCCATTCCCAGAAGCTTAAGTGCT +
Preference number: 6 (lower is better)
Translates to: MSISSSFFFFFFFLP*AGGSSSSIPRSLSA
Trigger: AGCACTTAAGCTTCTGGGAATGGAAGATGATGAACCCCCAGCCAAAGGCAAGAAGAAAAAGAAGAAGAAGAAAGAGGAAGAGATTGACAT
42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2
CDS CCA 72 bp TCTCTTCTTCCTTTTCTTTGCCATCTTCGTTCTCCTTaGATGTTTGATAGGAGAAGTCATCATATGTACGGA +
Preference number: 6 (lower is better)
Translates to: SLLPFLCHLRSP*MFDRRSHHMYG
Trigger: TCCGTACATATGATGACTTCTCCTATCAAACATCCAAGGAGAACGAAGATGGCAAAGAAAAGGAAGAAGAGA
40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt.
Matches the following 3 transcripts:
ENSMUST00000085222.12
ENSMUST00000206263.2
ENSMUST00000206277.2