Pregenerated sensors for TRPC6 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000031997Ensembl transcript IDs: ENSMUST00000050433.8, ENSMUST00000214596.2, ENSMUST00000217462.2
Found 88 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | AGAACTATATTTAGTAGCTTGTTAATGGCTGGAGAGATGGCTCTATaGTTAAGGGCACGTGATGCTCTTTCAGAAGAACAGAGTTCAGTC | + |
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Preference number: 1 (lower is better) Translates to: RTIFSSLLMAGEMAL*LRARDALSEEQSSV Trigger: GACTGAACTCTGTTCTTCTGAAAGAGCATCACGTGCCCTTAAGCATAGAGCCATCTCTCCAGCCATTAACAAGCTACTAAATATAGTTCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR CCA 90 bp | ACACAACACCCACACAGTTATAGGCAGTCTGTGAGCCTTCTGATATaGATGATAGAAATTGAACTTGGTTATTCTTTAAAAACAGTGTGT | + |
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Preference number: 1 (lower is better) Translates to: TQHPHSYRQSVSLLI*MIEIELGYSLKTVC Trigger: ACACACTGTTTTTAAAGAATAACCAAGTTCAATTTCTATCATCCATATCAGAAGGCTCACAGACTGCCTATAACTGTGTGGGTGTTGTGT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR-3UTR CCA 90 bp | GTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGGTCCACCCAGCTCCACTaGGAGTCTCTCTTATCATCT | + |
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Preference number: 2 (lower is better) Translates to: VYHLEHSCQRHLVTANVGSTQLH*ESLLSS Trigger: AGATGATAAGAGAGACTCCCAGTGGAGCTGGGTGGA...CCCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR-3UTR GCA 90 bp | GTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGGTGGTTTCACCCAGCATaGACATGTGCACACACATAT | + |
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Preference number: 2 (lower is better) Translates to: VYHLEHSCQRHLVTANVGWFHPA*TCAHTY Trigger: ATATGTGTGTGCACATGTGCATGCTGGGTGAAACCA...CCCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTGTGAGCCTTCTGATATGGATGATAGAAATTGAACTTGGTTATTCTTTAATCCAACACCCTCTCTaGTTTCACCCAGCATGCACA | + |
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Preference number: 2 (lower is better) Translates to: QSVSLLIWMIEIELGYSLIQHPL*FHPACT Trigger: TGTGCATGCTGGGTGAAACCAGAGAGGGTGTTGGAT...TAAAGAATAACCAAGTTCAATTTCTATCATCCATATCAGAAGGCTCACAGACTG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR-3UTR GCA 90 bp | ACATTAATATTTGCATCTCTCAGTTTTATCCACCCAGCTCCACTGGGAGTCTCTCCTTCATACAGACAATaGCTTAGGGTTTCTATATAC | + |
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Preference number: 2 (lower is better) Translates to: TLIFASLSFIHPAPLGVSPSYRQ*LRVSIY Trigger: GTATATAGAAACCCTAAGGCATTGTCTGTATGAAGG...AGAGACTCCCAGTGGAGCTGGGTGGATAAAACTGAGAGATGCAAATATTAATGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR-3UTR CCA 90 bp | CAGTCTGTGAGCCTTCTGATATGGATGATAGAAATTGAACTTGGTTATTCTTTACCACCAGGAAAAAGGTaGAATCTGAAATACTGTGAC | + |
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Preference number: 2 (lower is better) Translates to: QSVSLLIWMIEIELGYSLPPGKR*NLKYCD Trigger: GTCACAGTATTTCAGATTCCACCTTTTTCCTGGTGG...TAAAGAATAACCAAGTTCAATTTCTATCATCCATATCAGAAGGCTCACAGACTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR-3UTR GCA 90 bp | CAGTCTGTGAGCCTTCTGATATGGATGATAGAAATTGAACTTGGTTATTCTTTACCAGCCTCAAAACATTaGTTCAAAACAAATCACATT | + |
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Preference number: 2 (lower is better) Translates to: QSVSLLIWMIEIELGYSLPASKH*FKTNHI Trigger: AATGTGATTTGTTTTGAAGCAATGTTTTGAGGCTGG...TAAAGAATAACCAAGTTCAATTTCTATCATCCATATCAGAAGGCTCACAGACTG 34% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR GCA 72 bp | AGTCCCCAGCATCCATCAGACTCATGCACCAGAAACTaGAGCTCCCCGGAATCCAACACCCTCTCTGGTTTC | + |
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Preference number: 3 (lower is better) Translates to: SPQHPSDSCTRN*SSPESNTLSGF Trigger: GAAACCAGAGAGGGTGTTGGATTCCGGGGAGCTGCAGTTTCTGGTGCATGAGTCTGATGGATGCTGGGGACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR TCA 72 bp | AATGGCTGGAGAGATGGCTCTATGCTTAAGGGCACGTaGTGCTCTTTCAGAAGAACAGAGTTCAGTCCCCAG | + |
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Preference number: 3 (lower is better) Translates to: NGWRDGSMLKGT*CSFRRTEFSPQ Trigger: CTGGGGACTGAACTCTGTTCTTCTGAAAGAGCATCACGTGCCCTTAAGCATAGAGCCATCTCTCCAGCCATT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR GCA 72 bp | ACGGCGAATGTGGGGGCGGCTCCCAACATATATGTGTaGATGTGTGTGTATGTAAGTGTGTGTGTGAGAGTA | + |
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Preference number: 3 (lower is better) Translates to: TANVGAAPNIYV*MCVYVSVCVRV Trigger: TACTCTCACACACACACTTACATACACACACATGCACACATATATGTTGGGAGCCGCCCCCACATTCGCCGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR TCA 72 bp | CGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCACATaGATCCACATGCCTTCAGAAGCCAGAAGAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: RVCVCVCVCVFT*IHMPSEARRGK Trigger: CTTCCCTCTTCTGGCTTCTGAAGGCATGTGGATTCATGTGAAAACACACACACACACACACACACACACACG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR GCA 72 bp | TGTGTGTGTGTGTGTGTGTTTTCACATGAATCCACATaGCTTCAGAAGCCAGAAGAGGGAAGGCATCACACA | + |
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Preference number: 3 (lower is better) Translates to: CVCVCVFSHEST*LQKPEEGRHHT Trigger: TGTGTGATGCCTTCCCTCTTCTGGCTTCTGAAGGCATGTGGATTCATGTGAAAACACACACACACACACACA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR GCA 72 bp | TTTAGTAGCTTGTTAATGGCTGGAGAGATGGCTCTATaGTTAAGGGCACGTGATGCTCTTTCAGAAGAACAG | + |
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Preference number: 3 (lower is better) Translates to: FSSLLMAGEMAL*LRARDALSEEQ Trigger: CTGTTCTTCTGAAAGAGCATCACGTGCCCTTAAGCATAGAGCCATCTCTCCAGCCATTAACAAGCTACTAAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR TCA 72 bp | TCAGAAACTAGCAACCACCAGGAAAAAGGTGGAATCTaGAATACTGTGACTTCATTCCCTTCATACAGACAA | + |
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Preference number: 3 (lower is better) Translates to: SETSNHQEKGGI*NTVTSFPSYRQ Trigger: TTGTCTGTATGAAGGGAATGAAGTCACAGTATTTCAGATTCCACCTTTTTCCTGGTGGTTGCTAGTTTCTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR-3UTR CAA 90 bp | CAGTCTGTGAGCCTTCTGATATGGATGATAGAAATTGAACTTGGTTATTCTTTATATACTGAGTCATTGTaGTTATTACCCAAGTCAAGC | + |
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Preference number: 3 (lower is better) Translates to: QSVSLLIWMIEIELGYSLYTESL*LLPKSS Trigger: GCTTGACTTGGGTAATAACAACAATGACTCAGTATA...TAAAGAATAACCAAGTTCAATTTCTATCATCCATATCAGAAGGCTCACAGACTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR TCA 72 bp | CCTTCATACAGACAATGCCTTAGGGTTTCTATATACTaGGTCATTGTTGTTATTACCCAAGTCAAGCAAAAT | + |
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Preference number: 3 (lower is better) Translates to: PSYRQCLRVSIY*VIVVITQVKQN Trigger: ATTTTGCTTGACTTGGGTAATAACAACAATGACTCAGTATATAGAAACCCTAAGGCATTGTCTGTATGAAGG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR TCA 72 bp | GCAGTCTGTGAGCCTTCTGATATGGATGATAGAAATTaGACTTGGTTATTCTTTAAAAACAGTGTGTGTTCT | + |
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Preference number: 3 (lower is better) Translates to: AVCEPSDMDDRN*TWLFFKNSVCS Trigger: AGAACACACACTGTTTTTAAAGAATAACCAAGTTCAATTTCTATCATCCATATCAGAAGGCTCACAGACTGC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR GCA 90 bp | ACATTAATATTTGCATCTCTCAGTTTTATCCACCCAGCTCCACTGGGAGTCTCTTCTCGTTGCGCCGGGTaGCGGCTCCAGGGGCAGCCT | + |
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Preference number: 4 (lower is better) Translates to: TLIFASLSFIHPAPLGVSSRCAG*RLQGQP Trigger: AGGCTGCCCCTGGAGCCGGCACCCGGCGCAACGAGA...AGAGACTCCCAGTGGAGCTGGGTGGATAAAACTGAGAGATGCAAATATTAATGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR GCA 90 bp | GTCAAGCAAAATGGCACTGACTGTGATATTCCACATCCAAAGGGCCAGGATTTTAGTCCTGGCTCTCGTTaGGCCGGGTGCCGGCTCCAG | + |
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Preference number: 4 (lower is better) Translates to: VKQNGTDCDIPHPKGQDFSPGSR*AGCRLQ Trigger: CTGGAGCCGGCACCCGGCGCAACGAGAGCCAGGACT...AAAATCCTGGCCCTTTGGATGTGGAATATCACAGTCAGTGCCATTTTGCTTGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR TCA 90 bp | GCACTGACTGTGATATTCCACATCCAAAGGGCCAGGATTTTAATGACTAACCAGGATGCTTCCTCGGGATaGCCCCCTGCTCTTTCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ALTVIFHIQRARILMTNQDASSG*PPALSS Trigger: GCTGGAAAGAGCAGGGGGTCATCCCGAGGAAGCATC...CTGGTTAGTCATTAAAATCCTGGCCCTTTGGATGTGGAATATCACAGTCAGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CCA 90 bp | TTGACGTCACGGGGAAGGCAGAGCACAAGTAGTCATAAGATACCCTTGGCACATCATCCCCATTCAGGATaGCCTCCACTTCCTCTGTGT | + |
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Preference number: 4 (lower is better) Translates to: LTSRGRQSTSSHKIPLAHHPHSG*PPLPLC Trigger: ACACAGAGGAAGTGGAGGCCATCCTGAATGGGGATG...ATGTGCCAAGGGTATCTTATGACTACTTGTGCTCTGCCTTCCCCGTGACGTCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR TCA 90 bp | GTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGGTCCACACACACAAACTaGAGTAACAAAGGGGCCTCA | + |
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Preference number: 4 (lower is better) Translates to: VYHLEHSCQRHLVTANVGSTHTN*SNKGAS Trigger: TGAGGCCCCTTTGTTACTTCAGTTTGTGTGTGTGGA...CCCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR GCA 90 bp | GTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGGTGGCTGAAGGAATCATaGTTCTGCTTCTGGCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: VYHLEHSCQRHLVTANVGWLKES*FCFWLH Trigger: ATGCAGCCAGAAGCAGAAGCATGATTCCTTCAGCCA...CCCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR GCA 90 bp | GTTTACCACTTAGAACACAGCTGTCAGCGCCATCTTGTAACGGCGAATGTGGGGTGGATGGTTGAGGATTaGCTCCACAATCCGTACATA | + |
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Preference number: 4 (lower is better) Translates to: VYHLEHSCQRHLVTANVGWMVED*LHNPYI Trigger: TATGTACGGATTGTGGAGGCAATCCTCAACCATCCA...CCCCACATTCGCCGTTACAAGATGGCGCTGACAGCTGTGTTCTAAGTGGTAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR GCA 90 bp | ACATTAATATTTGCATCTCTCAGTTTTATCCACCCAGCTCCACTGGGAGTCTCTCTCGGGATGACCCCCTaGTCTTTCCAGCTTGGCATA | + |
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Preference number: 4 (lower is better) Translates to: TLIFASLSFIHPAPLGVSLGMTP*SFQLGI Trigger: TATGCCAAGCTGGAAAGAGCAGGGGGTCATCCCGAG...AGAGACTCCCAGTGGAGCTGGGTGGATAAAACTGAGAGATGCAAATATTAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CCA 90 bp | TTGACGTCACGGGGAAGGCAGAGCACAAGTAGTCATAAGATACCCTTGGCACATTCATGCTTCTGCTTCTaGCTGCATTCTGTACACTTG | + |
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Preference number: 4 (lower is better) Translates to: LTSRGRQSTSSHKIPLAHSCFCF*LHSVHL Trigger: CAAGTGTACAGAATGCAGCCAGAAGCAGAAGCATGA...ATGTGCCAAGGGTATCTTATGACTACTTGTGCTCTGCCTTCCCCGTGACGTCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR GCA 90 bp | GCACTGACTGTGATATTCCACATCCAAAGGGCCAGGATTTTAATGACTAACCAGTCTGTGATTTCCAAGTaGTCATTGGCCACAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: ALTVIFHIQRARILMTNQSVISK*SLATAS Trigger: GCTGGCTGTGGCCAATGAGCACTTGGAAATCACAGA...CTGGTTAGTCATTAAAATCCTGGCCCTTTGGATGTGGAATATCACAGTCAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CCA 90 bp | GTCAAGCAAAATGGCACTGACTGTGATATTCCACATCCAAAGGGCCAGGATTTTGCCTTCAGCAAAAGCTaGATGGTTGAGGATTGCCTC | + |
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Preference number: 4 (lower is better) Translates to: VKQNGTDCDIPHPKGQDFAFSKS*MVEDCL Trigger: GAGGCAATCCTCAACCATCCAGCTTTTGCTGAAGGC...AAAATCCTGGCCCTTTGGATGTGGAATATCACAGTCAGTGCCATTTTGCTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CCA 90 bp | GCACTGACTGTGATATTCCACATCCAAAGGGCCAGGATTTTAATGACTAACCAGGAAGTTCAGACTGGCTaGGGCTTGTCGCTAACCTTT | + |
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Preference number: 4 (lower is better) Translates to: ALTVIFHIQRARILMTNQEVQTG*GLSLTF Trigger: AAAGGTTAGCGACAAGCCCCAGCCAGTCTGAACTTC...CTGGTTAGTCATTAAAATCCTGGCCCTTTGGATGTGGAATATCACAGTCAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR TCA 90 bp | ACATTAATATTTGCATCTCTCAGTTTTATCCACCCAGCTCCACTGGGAGTCTCTAATGTGCAGCGAGAATaGTTGGGGTCACATCATGGG | + |
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Preference number: 4 (lower is better) Translates to: TLIFASLSFIHPAPLGVSNVQRE*LGSHHG Trigger: CCCATGATGTGACCCCAATCATTCTCGCTGCACATT...AGAGACTCCCAGTGGAGCTGGGTGGATAAAACTGAGAGATGCAAATATTAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR GCA 90 bp | TTGACGTCACGGGGAAGGCAGAGCACAAGTAGTCATAAGATACCCTTGGCACATTTTCTCAGGAGGGTATaGACAATTTCATATTCCTGG | + |
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Preference number: 4 (lower is better) Translates to: LTSRGRQSTSSHKIPLAHFLRRV*TISYSW Trigger: CCAGGAATATGAAATTGTGCATACCCTCCTGAGAAA...ATGTGCCAAGGGTATCTTATGACTACTTGTGCTCTGCCTTCCCCGTGACGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CCA 90 bp | GACCCTGGAAGGATTCAAACTGAAAATGGAATTGAAATTGCTGGTCCAAATCAGTTTCCAAGTGCTCATTaGCCACAGCCAGCTGTAGGG | + |
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Preference number: 4 (lower is better) Translates to: DPGRIQTENGIEIAGPNQFPSAH*PQPAVG Trigger: CCCTACAGCTGGCTGTGGCCAATGAGCACTTGGAAA...CTGATTTGGACCAGCAATTTCAATTCCATTTTCAGTTTGAATCCTTCCAGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CCA 90 bp | TTGACGTCACGGGGAAGGCAGAGCACAAGTAGTCATAAGATACCCTTGGCACATACAATTTCATATTCCTaGCAATGTGCAGCGAGAATG | + |
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Preference number: 4 (lower is better) Translates to: LTSRGRQSTSSHKIPLAHTISYS*QCAARM Trigger: CATTCTCGCTGCACATTGCCAGGAATATGAAATTGT...ATGTGCCAAGGGTATCTTATGACTACTTGTGCTCTGCCTTCCCCGTGACGTCAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR TCA 90 bp | GACCCTGGAAGGATTCAAACTGAAAATGGAATTGAAATTGCTGGTCCAAATCAGATCGTCTGCCGCCGGTaGGTCAGTCTGTTTTCATTA | + |
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Preference number: 4 (lower is better) Translates to: DPGRIQTENGIEIAGPNQIVCRR*VSLFSL Trigger: TAATGAAAACAGACTGACTCACCGGCGGCAGACGAT...CTGATTTGGACCAGCAATTTCAATTCCATTTTCAGTTTGAATCCTTCCAGGGTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR TCA 90 bp | ACATTAATATTTGCATCTCTCAGTTTTATCCACCCAGCTCCACTGGGAGTCTCTCAAGTTTTAAACGGCTaGGATTTGGACGGCCGAAGT | + |
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Preference number: 4 (lower is better) Translates to: TLIFASLSFIHPAPLGVSQVLNG*DLDGRS Trigger: ACTTCGGCCGTCCAAATCTCAGCCGTTTAAAACTTG...AGAGACTCCCAGTGGAGCTGGGTGGATAAAACTGAGAGATGCAAATATTAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR GCA 90 bp | ACATTAATATTTGCATCTCTCAGTTTTATCCACCCAGCTCCACTGGGAGTCTCTGCACCACTGGGATGTTaGCATATTCAGCTGCATCTA | + |
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Preference number: 4 (lower is better) Translates to: TLIFASLSFIHPAPLGVSAPLGC*HIQLHL Trigger: TAGATGCAGCTGAATATGGCAACATCCCAGTGGTGC...AGAGACTCCCAGTGGAGCTGGGTGGATAAAACTGAGAGATGCAAATATTAATGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CCA 90 bp | GCACTGACTGTGATATTCCACATCCAAAGGGCCAGGATTTTAATGACTAACCAGACTCTTTCTCAATGTTaGCAAGCACTGCCAGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: ALTVIFHIQRARILMTNQTLSQC*QALPAH Trigger: ATGAGCTGGCAGTGCTTGCCAACATTGAGAAAGAGT...CTGGTTAGTCATTAAAATCCTGGCCCTTTGGATGTGGAATATCACAGTCAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR GCA 90 bp | GTCAAGCAAAATGGCACTGACTGTGATATTCCACATCCAAAGGGCCAGGATTTTAAGGAATCATGCTTCTaGTTCTGGCTGCATTCTGTA | + |
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Preference number: 4 (lower is better) Translates to: VKQNGTDCDIPHPKGQDFKESCF*FWLHSV Trigger: TACAGAATGCAGCCAGAAGCAGAAGCATGATTCCTT...AAAATCCTGGCCCTTTGGATGTGGAATATCACAGTCAGTGCCATTTTGCTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CCA 90 bp | ACATTAATATTTGCATCTCTCAGTTTTATCCACCCAGCTCCACTGGGAGTCTCTCTGCTCTTTCCAGCTTaGCATATCCACACACACAAA | + |
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Preference number: 4 (lower is better) Translates to: TLIFASLSFIHPAPLGVSLLFPA*HIHTHK Trigger: TTTGTGTGTGTGGATATGCCAAGCTGGAAAGAGCAG...AGAGACTCCCAGTGGAGCTGGGTGGATAAAACTGAGAGATGCAAATATTAATGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR TCA 90 bp | GCACTGACTGTGATATTCCACATCCAAAGGGCCAGGATTTTAATGACTAACCAGTCCTGTAGTCATTCTTaGACTCTTTCTCAATGTTGG | + |
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Preference number: 4 (lower is better) Translates to: ALTVIFHIQRARILMTNQSCSHS*TLSQCW Trigger: CCAACATTGAGAAAGAGTTCAAGAATGACTACAGGA...CTGGTTAGTCATTAAAATCCTGGCCCTTTGGATGTGGAATATCACAGTCAGTGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR GCA 90 bp | GACCCTGGAAGGATTCAAACTGAAAATGGAATTGAAATTGCTGGTCCAAATCAGAATGTTGGCAAGCACTaGCAGCTCATTGCTAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: DPGRIQTENGIEIAGPNQNVGKH*QLIAKF Trigger: GAACTTAGCAATGAGCTGGCAGTGCTTGCCAACATT...CTGATTTGGACCAGCAATTTCAATTCCATTTTCAGTTTGAATCCTTCCAGGGTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CCA 90 bp | ACAGACAATGCCTTAGGGTTTCTATATACTGAGTCATTGTTGTTATTACCCAAGTGCAGCGAGAATGATTaGGGTCACATCATGGGAGAA | + |
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Preference number: 4 (lower is better) Translates to: TDNALGFLYTESLLLLPKCSEND*GHIMGE Trigger: TTCTCCCATGATGTGACCCCAATCATTCTCGCTGCA...CTTGGGTAATAACAACAATGACTCAGTATATAGAAACCCTAAGGCATTGTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR TCA 90 bp | GACCCTGGAAGGATTCAAACTGAAAATGGAATTGAAATTGCTGGTCCAAATCAGTTAACATTGAGGGAATaGCACTCTTCTAGCATCTTC | + |
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Preference number: 4 (lower is better) Translates to: DPGRIQTENGIEIAGPNQLTLRE*HSSSIF Trigger: GAAGATGCTAGAAGAGTGTCATTCCCTCAATGTTAA...CTGATTTGGACCAGCAATTTCAATTCCATTTTCAGTTTGAATCCTTCCAGGGTC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR TCA 90 bp | ACAGACAATGCCTTAGGGTTTCTATATACTGAGTCATTGTTGTTATTACCCAAGGTTCTAAAGCAGTCATaGCTGGATCTTCACTGGACA | + |
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Preference number: 4 (lower is better) Translates to: TDNALGFLYTESLLLLPKVLKQS*LDLHWT Trigger: TGTCCAGTGAAGATCCAGTCATGACTGCTTTAGAAC...CTTGGGTAATAACAACAATGACTCAGTATATAGAAACCCTAAGGCATTGTCTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR GCA 90 bp | CAGTCTGTGAGCCTTCTGATATGGATGATAGAAATTGAACTTGGTTATTCTTTAGCTTCTGCTTCTGGCTaGATTCTGTACACTTGCAGA | + |
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Preference number: 4 (lower is better) Translates to: QSVSLLIWMIEIELGYSLASASG*ILYTCR Trigger: TCTGCAAGTGTACAGAATGCAGCCAGAAGCAGAAGC...TAAAGAATAACCAAGTTCAATTTCTATCATCCATATCAGAAGGCTCACAGACTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CCA 90 bp | ATTCAAACTGAAAATGGAATTGAAATTGCTGGTCCAAATCAGAAACTAGCAACCTCAGCAAAAGCTGGATaGTTGAGGATTGCCTCCACA | + |
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Preference number: 4 (lower is better) Translates to: IQTENGIEIAGPNQKLATSAKAG*LRIAST Trigger: TGTGGAGGCAATCCTCAACCATCCAGCTTTTGCTGA...GGTTGCTAGTTTCTGATTTGGACCAGCAATTTCAATTCCATTTTCAGTTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR TCA 90 bp | GACCCTGGAAGGATTCAAACTGAAAATGGAATTGAAATTGCTGGTCCAAATCAGGACAGGCTTGTTGAATaGTCATTAAACATGTATGCT | + |
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Preference number: 4 (lower is better) Translates to: DPGRIQTENGIEIAGPNQDRLVE*SLNMYA Trigger: AGCATACATGTTTAATGATCATTCAACAAGCCTGTC...CTGATTTGGACCAGCAATTTCAATTCCATTTTCAGTTTGAATCCTTCCAGGGTC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| 3UTR CAA 72 bp | ACAGACAATGCCTTAGGGTTTCTATATACTGAGTCATaGTTGTTATTACCCAAGTCAAGCAAAATGGCACTG | + |
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Preference number: 4 (lower is better) Translates to: TDNALGFLYTES*LLLPKSSKMAL Trigger: CAGTGCCATTTTGCTTGACTTGGGTAATAACAACAATGACTCAGTATATAGAAACCCTAAGGCATTGTCTGT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR GCA 90 bp | CAGTCTGTGAGCCTTCTGATATGGATGATAGAAATTGAACTTGGTTATTCTTTATTGTCGCTAACCTTTTaGCTTCAGCAAAAGCTGGAT | + |
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Preference number: 4 (lower is better) Translates to: QSVSLLIWMIEIELGYSLLSLTF*LQQKLD Trigger: ATCCAGCTTTTGCTGAAGGCAAAAGGTTAGCGACAA...TAAAGAATAACCAAGTTCAATTTCTATCATCCATATCAGAAGGCTCACAGACTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR GCA 90 bp | ATTCAAACTGAAAATGGAATTGAAATTGCTGGTCCAAATCAGAAACTAGCAACCTGCCAGACCTTTGTATaGATTGATCCTGGATCTAGA | + |
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Preference number: 4 (lower is better) Translates to: IQTENGIEIAGPNQKLATCQTFV*IDPGSR Trigger: TCTAGATCCAGGATCAATGCATACAAAGGTCTGGCA...GGTTGCTAGTTTCTGATTTGGACCAGCAATTTCAATTCCATTTTCAGTTTGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS GCA 90 bp | CCAGCTCGTCCATCAGCAAATAGTCCTGGCTCTCGTTGCGCCGGGTaGCGGCTCCAGGGGCAGCCTTTAGAGAGCCGCCCCTCCGGGTCA | + |
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Preference number: 5 (lower is better) Translates to: PARPSANSPGSRCAG*RLQGQPLESRPSGS Trigger: TGACCCGGAGGGGCGGCTCTCTAAAGGCTGCCCCTGGAGCCGGCACCCGGCGCAACGAGAGCCAGGACTATTTGCTGATGGACGAGCTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS GCA 90 bp | CGTCGTCTCCCAGCTCGTCCATCAGCAAATAGTCCTGGCTCTCGTTaGGCCGGGTGCCGGCTCCAGGGGCAGCCTTTAGAGAGCCGCCCC | + |
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Preference number: 5 (lower is better) Translates to: RRLPARPSANSPGSR*AGCRLQGQPLESRP Trigger: GGGGCGGCTCTCTAAAGGCTGCCCCTGGAGCCGGCACCCGGCGCAACGAGAGCCAGGACTATTTGCTGATGGACGAGCTGGGAGACGACG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS GCA 90 bp | GCTGGTTTCATTAGGGAGGAGCTTGGTGCCTTCAAATCTGTCAGCTaGATTCATGACGAGCAGCCCCAGGAAAATGGTGAAGGAGGCTGC | + |
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Preference number: 5 (lower is better) Translates to: AGFIREELGAFKSVS*IHDEQPQENGEGGC Trigger: GCAGCCTCCTTCACCATTTTCCTGGGGCTGCTCGTCATGAATGCAGCTGACAGATTTGAAGGCACCAAGCTCCTCCCTAATGAAACCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 |
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| CDS TCA 90 bp | CTCGCAATATCTTCCCCATCTTGCTGCAAGGAGCACACCAGTATATaGGAGCCAGGAAGGGCAATCCAATGGCAACAGCAAGGACCACGA | + |
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Preference number: 5 (lower is better) Translates to: LAISSPSCCKEHTSI*EPGRAIQWQQQGPR Trigger: TCGTGGTCCTTGCTGTTGCCATTGGATTGCCCTTCCTGGCTCTCATATACTGGTGTGCTCCTTGCAGCAAGATGGGGAAGATATTGCGAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 |
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| CDS GCA 90 bp | ACCCTTTCTCAGGAGGGTATGCACAATTTCATATTCCTGGCAATGTaGAGCGAGAATGATTGGGGTCACATCATGGGAGAACCGCGTCCC | + |
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Preference number: 5 (lower is better) Translates to: TLSQEGMHNFIFLAM*SENDWGHIMGEPRP Trigger: GGGACGCGGTTCTCCCATGATGTGACCCCAATCATTCTCGCTGCACATTGCCAGGAATATGAAATTGTGCATACCCTCCTGAGAAAGGGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS CCA 90 bp | ATCCGGGCACCCTTTCTCAGGAGGGTATGCACAATTTCATATTCCTaGCAATGTGCAGCGAGAATGATTGGGGTCACATCATGGGAGAAC | + |
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Preference number: 5 (lower is better) Translates to: IRAPFLRRVCTISYS*QCAARMIGVTSWEN Trigger: GTTCTCCCATGATGTGACCCCAATCATTCTCGCTGCACATTGCCAGGAATATGAAATTGTGCATACCCTCCTGAGAAAGGGTGCCCGGAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS TCA 90 bp | GGAGGGTATGCACAATTTCATATTCCTGGCAATGTGCAGCGAGAATaGTTGGGGTCACATCATGGGAGAACCGCGTCCCATCTTCATCAT | + |
|
Preference number: 5 (lower is better) Translates to: GGYAQFHIPGNVQRE*LGSHHGRTASHLHH Trigger: ATGATGAAGATGGGACGCGGTTCTCCCATGATGTGACCCCAATCATTCTCGCTGCACATTGCCAGGAATATGAAATTGTGCATACCCTCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS CCA 90 bp | GGTATGCACAATTTCATATTCCTGGCAATGTGCAGCGAGAATGATTaGGGTCACATCATGGGAGAACCGCGTCCCATCTTCATCATAGGC | + |
|
Preference number: 5 (lower is better) Translates to: GMHNFIFLAMCSEND*GHIMGEPRPIFIIG Trigger: GCCTATGATGAAGATGGGACGCGGTTCTCCCATGATGTGACCCCAATCATTCTCGCTGCACATTGCCAGGAATATGAAATTGTGCATACC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS GCA 90 bp | AGCATCTCCATCCATGAGAAACAGGATGTTTTCATCCTGAACAGCTaGCTTGCATTATCTGTGCTGGTTTCATTAGGGAGGAGCTTGGTG | + |
|
Preference number: 5 (lower is better) Translates to: SISIHEKQDVFILNS*LALSVLVSLGRSLV Trigger: CACCAAGCTCCTCCCTAATGAAACCAGCACAGATAATGCAAGGCAGCTGTTCAGGATGAAAACATCCTGTTTCTCATGGATGGAGATGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 |
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| CDS-3UTR CAA 90 bp | GCACTGACTGTGATATTCCACATCCAAAGGGCCAGGATTTTAATGACTAACCAGGCAAAAGCTGGATGGTaGAGGATTGCCTCCACAATC | + |
|
Preference number: 5 (lower is better) Translates to: ALTVIFHIQRARILMTNQAKAGW*RIASTI Trigger: GATTGTGGAGGCAATCCTCAACCATCCAGCTTTTGC...CTGGTTAGTCATTAAAATCCTGGCCCTTTGGATGTGGAATATCACAGTCAGTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CAA 90 bp | GACCCTGGAAGGATTCAAACTGAAAATGGAATTGAAATTGCTGGTCCAAATCAGATTTCCAAGTGCTCATaGGCCACAGCCAGCTGTAGG | + |
|
Preference number: 5 (lower is better) Translates to: DPGRIQTENGIEIAGPNQISKCS*ATASCR Trigger: CCTACAGCTGGCTGTGGCCAATGAGCACTTGGAAAT...CTGATTTGGACCAGCAATTTCAATTCCATTTTCAGTTTGAATCCTTCCAGGGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CAA 90 bp | GCACTGACTGTGATATTCCACATCCAAAGGGCCAGGATTTTAATGACTAACCAGCTTGTCGCTAACCTTTaGCCTTCAGCAAAAGCTGGA | + |
|
Preference number: 5 (lower is better) Translates to: ALTVIFHIQRARILMTNQLVANL*PSAKAG Trigger: TCCAGCTTTTGCTGAAGGCAAAAGGTTAGCGACAAG...CTGGTTAGTCATTAAAATCCTGGCCCTTTGGATGTGGAATATCACAGTCAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CAA 90 bp | GCACTGACTGTGATATTCCACATCCAAAGGGCCAGGATTTTAATGACTAACCAGAACTCTTTCTCAATGTaGGCAAGCACTGCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: ALTVIFHIQRARILMTNQNSFSM*ASTASS Trigger: TGAGCTGGCAGTGCTTGCCAACATTGAGAAAGAGTT...CTGGTTAGTCATTAAAATCCTGGCCCTTTGGATGTGGAATATCACAGTCAGTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CAA 90 bp | ACATTAATATTTGCATCTCTCAGTTTTATCCACCCAGCTCCACTGGGAGTCTCTCCTGCTCTTTCCAGCTaGGCATATCCACACACACAA | + |
|
Preference number: 5 (lower is better) Translates to: TLIFASLSFIHPAPLGVSPALSS*AYPHTQ Trigger: TTGTGTGTGTGGATATGCCAAGCTGGAAAGAGCAGG...AGAGACTCCCAGTGGAGCTGGGTGGATAAAACTGAGAGATGCAAATATTAATGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CAA 90 bp | GCACTGACTGTGATATTCCACATCCAAAGGGCCAGGATTTTAATGACTAACCAGGGCATAAAAGTCATCTaGCTGAAGTTCAGACTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: ALTVIFHIQRARILMTNQGIKVI*LKFRLA Trigger: AGCCAGTCTGAACTTCAGCAAGATGACTTTTATGCC...CTGGTTAGTCATTAAAATCCTGGCCCTTTGGATGTGGAATATCACAGTCAGTGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS TCA 90 bp | GCTGCATCTAGAAAGCGTTCTTCCTCAATAGACAGGCTTGTTGAATaGTCATTAAACATGTATGCTGGTCCTCGATTAGCTAACCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: AASRKRSSSIDRLVE*SLNMYAGPRLANLL Trigger: AAGAAGGTTAGCTAATCGAGGACCAGCATACATGTTTAATGATCATTCAACAAGCCTGTCTATTGAGGAAGAACGCTTTCTAGATGCAGC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS-3UTR CAA 90 bp | GACCCTGGAAGGATTCAAACTGAAAATGGAATTGAAATTGCTGGTCCAAATCAGGACAAGTTTTCCTTCTaGAGTAGCAGCTCTGTGATT | + |
|
Preference number: 5 (lower is better) Translates to: DPGRIQTENGIEIAGPNQDKFSF*SSSSVI Trigger: AATCACAGAGCTGCTACTCAAGAAGGAAAACTTGTC...CTGATTTGGACCAGCAATTTCAATTCCATTTTCAGTTTGAATCCTTCCAGGGTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CAA 90 bp | ACAGACAATGCCTTAGGGTTTCTATATACTGAGTCATTGTTGTTATTACCCAAGGGACTTGCCAGACCTTaGTATGCATTGATCCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: TDNALGFLYTESLLLLPKGLARP*YALILD Trigger: ATCCAGGATCAATGCATACAAAGGTCTGGCAAGTCC...CTTGGGTAATAACAACAATGACTCAGTATATAGAAACCCTAAGGCATTGTCTGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS-3UTR CAA 90 bp | ATTCAAACTGAAAATGGAATTGAAATTGCTGGTCCAAATCAGAAACTAGCAACCAGCACTGCCAGCTCATaGCTAAGTTCTAAAGCAGTC | + |
|
Preference number: 5 (lower is better) Translates to: IQTENGIEIAGPNQKLATSTASS*LSSKAV Trigger: GACTGCTTTAGAACTTAGCAATGAGCTGGCAGTGCT...GGTTGCTAGTTTCTGATTTGGACCAGCAATTTCAATTCCATTTTCAGTTTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000217462.2 |
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| CDS GCA 72 bp | CCATCAGCAAATAGTCCTGGCTCTCGTTGCGCCGGGTaGCGGCTCCAGGGGCAGCCTTTAGAGAGCCGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: PSANSPGSRCAG*RLQGQPLESRP Trigger: GGGGCGGCTCTCTAAAGGCTGCCCCTGGAGCCGGCACCCGGCGCAACGAGAGCCAGGACTATTTGCTGATGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS GCA 72 bp | CCAGCTCGTCCATCAGCAAATAGTCCTGGCTCTCGTTaGGCCGGGTGCCGGCTCCAGGGGCAGCCTTTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: PARPSANSPGSR*AGCRLQGQPLE Trigger: CTCTAAAGGCTGCCCCTGGAGCCGGCACCCGGCGCAACGAGAGCCAGGACTATTTGCTGATGGACGAGCTGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS CCA 72 bp | TTCATTACCCCGGAAGCTGGGGTAGTAGCCATACGGTaGCAGCGGGAGCTGCGGGTAGCCGTCGTCTCCCAG | + |
|
Preference number: 6 (lower is better) Translates to: FITPEAGVVAIR*QRELRVAVVSQ Trigger: CTGGGAGACGACGGCTACCCGCAGCTCCCGCTGCCACCGTATGGCTACTACCCCAGCTTCCGGGGTAATGAA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS CCA 72 bp | GCCGGTGAGTCAGTCTGTTTTCATTACCCCGGAAGCTaGGGTAGTAGCCATACGGTGGCAGCGGGAGCTGCG | + |
|
Preference number: 6 (lower is better) Translates to: AGESVCFHYPGS*GSSHTVAAGAA Trigger: CGCAGCTCCCGCTGCCACCGTATGGCTACTACCCCAGCTTCCGGGGTAATGAAAACAGACTGACTCACCGGC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS TCA 72 bp | CTTCTTCCCTTCTCACGAAGAATCGTCTGCCGCCGGTaGGTCAGTCTGTTTTCATTACCCCGGAAGCTGGGG | + |
|
Preference number: 6 (lower is better) Translates to: LLPFSRRIVCRR*VSLFSLPRKLG Trigger: CCCCAGCTTCCGGGGTAATGAAAACAGACTGACTCACCGGCGGCAGACGATTCTTCGTGAGAAGGGAAGAAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS CAA 90 bp | AACAGCTGCCTTGCATTATCTGTGCTGGTTTCATTAGGGAGGAGCTaGGTGCCTTCAAATCTGTCAGCTGCATTCATGACGAGCAGCCCC | + |
|
Preference number: 6 (lower is better) Translates to: NSCLALSVLVSLGRS*VPSNLSAAFMTSSP Trigger: GGGGCTGCTCGTCATGAATGCAGCTGACAGATTTGAAGGCACCAAGCTCCTCCCTAATGAAACCAGCACAGATAATGCAAGGCAGCTGTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 |
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| CDS TCA 72 bp | TCTTCCCCATCTTGCTGCAAGGAGCACACCAGTATATaGGAGCCAGGAAGGGCAATCCAATGGCAACAGCAA | + |
|
Preference number: 6 (lower is better) Translates to: SSPSCCKEHTSI*EPGRAIQWQQQ Trigger: TTGCTGTTGCCATTGGATTGCCCTTCCTGGCTCTCATATACTGGTGTGCTCCTTGCAGCAAGATGGGGAAGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 |
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| CDS TCA 72 bp | GCACAATTTCATATTCCTGGCAATGTGCAGCGAGAATaGTTGGGGTCACATCATGGGAGAACCGCGTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: AQFHIPGNVQRE*LGSHHGRTASH Trigger: ATGGGACGCGGTTCTCCCATGATGTGACCCCAATCATTCTCGCTGCACATTGCCAGGAATATGAAATTGTGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS GCA 72 bp | AATCATGCTTCTGCTTCTGGCTGCATTCTGTACACTTaGAGAAGTAATCATGAGGCCGCTCAATCCGGGCAC | + |
|
Preference number: 6 (lower is better) Translates to: NHASASGCILYT*RSNHEAAQSGH Trigger: GTGCCCGGATTGAGCGGCCTCATGATTACTTCTGCAAGTGTACAGAATGCAGCCAGAAGCAGAAGCATGATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS CCA 72 bp | AATTTCATATTCCTGGCAATGTGCAGCGAGAATGATTaGGGTCACATCATGGGAGAACCGCGTCCCATCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NFIFLAMCSEND*GHIMGEPRPIF Trigger: GAAGATGGGACGCGGTTCTCCCATGATGTGACCCCAATCATTCTCGCTGCACATTGCCAGGAATATGAAATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS GCA 72 bp | CAGGAGGGTATGCACAATTTCATATTCCTGGCAATGTaGAGCGAGAATGATTGGGGTCACATCATGGGAGAA | + |
|
Preference number: 6 (lower is better) Translates to: QEGMHNFIFLAM*SENDWGHIMGE Trigger: TTCTCCCATGATGTGACCCCAATCATTCTCGCTGCACATTGCCAGGAATATGAAATTGTGCATACCCTCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS TCA 72 bp | TCGCTAACCTTTTGCCTTCAGCAAAAGCTGGATGGTTaGGGATTGCCTCCACAATCCGTACATAACCTTTAC | + |
|
Preference number: 6 (lower is better) Translates to: SLTFCLQQKLDG*GLPPQSVHNLY Trigger: GTAAAGGTTATGTACGGATTGTGGAGGCAATCCTCAACCATCCAGCTTTTGCTGAAGGCAAAAGGTTAGCGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS GCA 72 bp | ATCCATGAGAAACAGGATGTTTTCATCCTGAACAGCTaGCTTGCATTATCTGTGCTGGTTTCATTAGGGAGG | + |
|
Preference number: 6 (lower is better) Translates to: IHEKQDVFILNS*LALSVLVSLGR Trigger: CCTCCCTAATGAAACCAGCACAGATAATGCAAGGCAGCTGTTCAGGATGAAAACATCCTGTTTCTCATGGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 |
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| CDS CCA 72 bp | TCCCCTTCATTCACCTCATCGCTCTCCTTATCAATCTaGGCCTGCAATACATATCTTTTAATGAGTCTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: SPSFTSSLSLSI*ACNTYLLMSLF Trigger: GAAGAGACTCATTAAAAGATATGTATTGCAGGCCCAGATTGATAAGGAGAGCGATGAGGTGAATGAAGGGGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 |
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| CDS CAA 72 bp | AACTCTTTCTCAATGTTGGCAAGCACTGCCAGCTCATaGCTAAGTTCTAAAGCAGTCATGACTGGATCTTCA | + |
|
Preference number: 6 (lower is better) Translates to: NSFSMLASTASS*LSSKAVMTGSS Trigger: TGAAGATCCAGTCATGACTGCTTTAGAACTTAGCAATGAGCTGGCAGTGCTTGCCAACATTGAGAAAGAGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS TCA 72 bp | AGAAAGCGTTCTTCCTCAATAGACAGGCTTGTTGAATaGTCATTAAACATGTATGCTGGTCCTCGATTAGCT | + |
|
Preference number: 6 (lower is better) Translates to: RKRSSSIDRLVE*SLNMYAGPRLA Trigger: AGCTAATCGAGGACCAGCATACATGTTTAATGATCATTCAACAAGCCTGTCTATTGAGGAAGAACGCTTTCT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 ENSMUST00000217462.2 |
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| CDS GCA 72 bp | TCATTCACCTCATCGCTCTCCTTATCAATCTGGGCCTaGAATACATATCTTTTAATGAGTCTCTTCATGATT | + |
|
Preference number: 6 (lower is better) Translates to: SFTSSLSLSIWA*NTYLLMSLFMI Trigger: AATCATGAAGAGACTCATTAAAAGATATGTATTGCAGGCCCAGATTGATAAGGAGAGCGATGAGGTGAATGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 |
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| CDS CAA 72 bp | TGTTGTGTGCCAACTGATTTTTGTCAAGTGAAAATTTaGAAAGGTCTTCGTGACTTCCTGAAATTCCAAATT | + |
|
Preference number: 6 (lower is better) Translates to: CCVPTDFCQVKI*KGLRDFLKFQI Trigger: AATTTGGAATTTCAGGAAGTCACGAAGACCTTTCAAAATTTTCACTTGACAAAAATCAGTTGGCACACAACA 35% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000050433.8 ENSMUST00000214596.2 |
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