Pregenerated sensors for TRPC5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000041710Ensembl transcript IDs: ENSMUST00000040184.4
Found 176 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTTTaGAGTCTCCCTTTAATGCTGTTCATCGGACCAGCATGGGCAGCG | + |
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Preference number: 1 (lower is better) Translates to: TERPVLPRNHKLTIL*SLPLMLFIGPAWAA Trigger: CGCTGCCCATGCTGGTCCGATGAACAGCATTAAAGGGAGACTCCAAAGAATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| 3UTR CCA 90 bp | AGAATGTGGCTAGAAAAGACTGAAAGTAATAGGAGTTTCACTCCTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG | + |
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Preference number: 1 (lower is better) Translates to: RMWLEKTESNRSFTP*CVCVCVCVCVCVCV Trigger: CACACACACACACACACACACACACACACACACACACACACACCAAGGAGTGAAACTCCTATTACTTTCAGTCTTTTCTAGCCACATTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| 3UTR TCA 90 bp | TGTGTGTGTTGGGGACAGGGAGGGAACCAAATTTGGGGTCACCTCTaGGAACAGGGAAATTACAAATATTCTCTTGAATTCCAGAATAGA | + |
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Preference number: 1 (lower is better) Translates to: CVCWGQGGNQIWGHL*EQGNYKYSLEFQNR Trigger: TCTATTCTGGAATTCAAGAGAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAATTTGGTTCCCTCCCTGTCCCCAACACACACA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| 3UTR-3UTR TCA 90 bp | ATCGGACCAGCATGGGCAGCGTGTAGCACTGAAGAGCAACGAAGACAGGCAGGTATTTGGGGTCACCTCTaGGAACAGGGAAATTACAAA | + |
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Preference number: 2 (lower is better) Translates to: IGPAWAACSTEEQRRQAGIWGHL*EQGNYK Trigger: TTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAAT...ACCTGCCTGTCTTCGTTGCTCTTCAGTGCTACACGCTGCCCATGCTGGTCCGAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| 3UTR TCA 72 bp | CTGACCGTAGCCCTCAGCTCTGTGGGGAGATGGGTGTaGGATCCTGAGGCATGTCAGGAATCTATGCGGCAG | + |
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Preference number: 3 (lower is better) Translates to: LTVALSSVGRWV*DPEACQESMRQ Trigger: CTGCCGCATAGATTCCTGACATGCCTCAGGATCTCACACCCATCTCCCCACAGAGCTGAGGGCTACGGTCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| 3UTR CCA 72 bp | TGGAGTCTCCCTTTAATGCTGTTCATCGGACCAGCATaGGCAGCGTGTAGCACTGAAGAGCAACGAAGACAG | + |
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Preference number: 3 (lower is better) Translates to: WSLPLMLFIGPA*AACSTEEQRRQ Trigger: CTGTCTTCGTTGCTCTTCAGTGCTACACGCTGCCCATGCTGGTCCGATGAACAGCATTAAAGGGAGACTCCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| 3UTR-3UTR CAA 90 bp | CTAGAAAAGACTGAAAGTAATAGGAGTTTCACTCCTTGGTGTGTGTGTGTGTGTGGGAGGGAACCAAATTaGGGGTCACCTCTGAGAACA | + |
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Preference number: 3 (lower is better) Translates to: LEKTESNRSFTPWCVCVCGREPN*GSPLRT Trigger: TGTTCTCAGAGGTGACCCCAAATTTGGTTCCCTCCC...ACACACACACACACACCAAGGAGTGAAACTCCTATTACTTTCAGTCTTTTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| 3UTR TCA 72 bp | TGGGGACAGGGAGGGAACCAAATTTGGGGTCACCTCTaGGAACAGGGAAATTACAAATATTCTCTTGAATTC | + |
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Preference number: 3 (lower is better) Translates to: WGQGGNQIWGHL*EQGNYKYSLEF Trigger: GAATTCAAGAGAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAATTTGGTTCCCTCCCTGTCCCCA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| 3UTR CCA 72 bp | CTAGAAAAGACTGAAAGTAATAGGAGTTTCACTCCTTaGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT | + |
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Preference number: 3 (lower is better) Translates to: LEKTESNRSFTP*CVCVCVCVCVC Trigger: ACACACACACACACACACACACACACACACACACCAAGGAGTGAAACTCCTATTACTTTCAGTCTTTTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | ATCGGACCAGCATGGGCAGCGTGTAGCACTGAAGAGCAACGAAGACAGGCAGGTCGTCCCAAAGAGATCTaGAGAGGCCCTAAATGGGAG | + |
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Preference number: 4 (lower is better) Translates to: IGPAWAACSTEEQRRQAGRPKEI*RGPKWE Trigger: CTCCCATTTAGGGCCTCTGCAGATCTCTTTGGGACG...ACCTGCCTGTCTTCGTTGCTCTTCAGTGCTACACGCTGCCCATGCTGGTCCGAT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | ATCGGACCAGCATGGGCAGCGTGTAGCACTGAAGAGCAACGAAGACAGGCAGGTAATTTGAGGAGCAGATaGCGGATGCACAGTGAAGGG | + |
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Preference number: 4 (lower is better) Translates to: IGPAWAACSTEEQRRQAGNLRSR*RMHSEG Trigger: CCCTTCACTGTGCATCCGGCATCTGCTCCTCAAATT...ACCTGCCTGTCTTCGTTGCTCTTCAGTGCTACACGCTGCCCATGCTGGTCCGAT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | GTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGGCGCCACTAGCTCTTaGCACGGTTCTGATGAGCGG | + |
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Preference number: 4 (lower is better) Translates to: VSLLGVCVCVCVCVCVCVGATSS*HGSDER Trigger: CCGCTCATCAGAACCGTGCCAAGAGCTAGTGGCGCC...CACACACACACACACACACACACACACACACACACACACACCAAGGAGTGAAAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | AATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGAGGCAAGTTGGGGGAGGTCCTTaGACATGGAGGTCTGTTCTG | + |
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Preference number: 4 (lower is better) Translates to: NLCGSYGSKVAPGASRRQVGGGP*TWRSVL Trigger: CAGAACAGACCTCCATGTTCAAGGACCTCCCCCAAC...TTGCCTCCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | ATCGGACCAGCATGGGCAGCGTGTAGCACTGAAGAGCAACGAAGACAGGCAGGTGCTGGTTCAGTCCGTTaGCAAAAGCCAGTAGTACTA | + |
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Preference number: 4 (lower is better) Translates to: IGPAWAACSTEEQRRQAGAGSVR*QKPVVL Trigger: TAGTACTACTGGCTTTTGCCAACGGACTGAACCAGC...ACCTGCCTGTCTTCGTTGCTCTTCAGTGCTACACGCTGCCCATGCTGGTCCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | ATCGGACCAGCATGGGCAGCGTGTAGCACTGAAGAGCAACGAAGACAGGCAGGTTCAGCAGTAGCTCCATaGTCTCCAAGTTCTCATTCT | + |
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Preference number: 4 (lower is better) Translates to: IGPAWAACSTEEQRRQAGSAVAP*SPSSHS Trigger: AGAATGAGAACTTGGAGATCATGGAGCTACTGCTGA...ACCTGCCTGTCTTCGTTGCTCTTCAGTGCTACACGCTGCCCATGCTGGTCCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | AATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGAGGCAAGACCAGAAGAGCGACTaGAGGGTTTCAAAGAGCGTG | + |
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Preference number: 4 (lower is better) Translates to: NLCGSYGSKVAPGASRRQDQKSD*RVSKSV Trigger: CACGCTCTTTGAAACCCTTCAGTCGCTCTTCTGGTC...TTGCCTCCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | GGGTGTGAGATCCTGAGGCATGTCAGGAATCTATGCGGCAGCTATGGTAGCAAACTCCCACAAACTCAGTaGACTCATGTCGGGCCTTCA | + |
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Preference number: 4 (lower is better) Translates to: GCEILRHVRNLCGSYGSKLPQTQ*THVGPS Trigger: TGAAGGCCCGACATGAGTTCACTGAGTTTGTGGGAG...TTTGCTACCATAGCTGCCGCATAGATTCCTGACATGCCTCAGGATCTCACACCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | ATCGGACCAGCATGGGCAGCGTGTAGCACTGAAGAGCAACGAAGACAGGCAGGTGACAGAAGGTGTTGTTaGACCAGTTGCCAAGATAGA | + |
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Preference number: 4 (lower is better) Translates to: IGPAWAACSTEEQRRQAGDRRCC*TSCQDR Trigger: TCTATCTTGGCAACTGGTTCAACAACACCTTCTGTC...ACCTGCCTGTCTTCGTTGCTCTTCAGTGCTACACGCTGCCCATGCTGGTCCGAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | GTCAGGAATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGATCAGGCTGTCAGCATaGCGTTCTGTGAAGCTTCTC | + |
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Preference number: 4 (lower is better) Translates to: VRNLCGSYGSKVAPGASRIRLSA*RSVKLL Trigger: GAGAAGCTTCACAGAACGTCATGCTGACAGCCTGAT...CCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATTCCTGAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | AGTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTGCAGCGGATCTGGTaGGGCCTTGGGATAGTGACC | + |
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Preference number: 4 (lower is better) Translates to: SFTPWCVCVCVCVCVCVCLQRIW*GLGIVT Trigger: GGTCACTATCCCAAGGCCCCACCAGATCCGCTGCAA...ACACACACACACACACACACACACACACACACACACACACCAAGGAGTGAAACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | TGGAGTCTCCCTTTAATGCTGTTCATCGGACCAGCATGGGCAGCGTGTAGCACTGCCCAAGGTTGCTTCTaGGTGAGATCAGATAGGCTA | + |
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Preference number: 4 (lower is better) Translates to: WSLPLMLFIGPAWAACSTAQGCF*VRSDRL Trigger: TAGCCTATCTGATCTCACCCAGAAGCAACCTTGGGC...AGTGCTACACGCTGCCCATGCTGGTCCGATGAACAGCATTAAAGGGAGACTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | TGGAGTCTCCCTTTAATGCTGTTCATCGGACCAGCATGGGCAGCGTGTAGCACTCATGGAGGTCTGTTCTaGCGATATGTTGAGAAGCCA | + |
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Preference number: 4 (lower is better) Translates to: WSLPLMLFIGPAWAACSTHGGLF*RYVEKP Trigger: TGGCTTCTCAACATATCGTCAGAACAGACCTCCATG...AGTGCTACACGCTGCCCATGCTGGTCCGATGAACAGCATTAAAGGGAGACTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | ATCGGACCAGCATGGGCAGCGTGTAGCACTGAAGAGCAACGAAGACAGGCAGGTGTAGGTTCAGATGTTTaGCCATTGAACTTGGAGAAG | + |
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Preference number: 4 (lower is better) Translates to: IGPAWAACSTEEQRRQAGVGSDV*PLNLEK Trigger: CTTCTCCAAGTTCAATGGTCAAACATCTGAACCTAC...ACCTGCCTGTCTTCGTTGCTCTTCAGTGCTACACGCTGCCCATGCTGGTCCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | GTCAGGAATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGCAAAAGTTTCGAATTTaGGGAGCAGATGCCGGATGC | + |
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Preference number: 4 (lower is better) Translates to: VRNLCGSYGSKVAPGASRQKFRI*GADAGC Trigger: GCATCCGGCATCTGCTCCTCAAATTCGAAACTTTTG...CCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATTCCTGAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | GTCAGGAATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGGTTGTTGGTGTGGGCTaGCAACATAATGGGAGTGAT | + |
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Preference number: 4 (lower is better) Translates to: VRNLCGSYGSKVAPGASRVVGVG*QHNGSD Trigger: ATCACTCCCATTATGTTGGCAGCCCACACCAACAAC...CCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATTCCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | ATCGGACCAGCATGGGCAGCGTGTAGCACTGAAGAGCAACGAAGACAGGCAGGTCTTCAAGGAAATAGTTaGCAGGTAGAGGGAGTTCAT | + |
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Preference number: 4 (lower is better) Translates to: IGPAWAACSTEEQRRQAGLQGNS*QVEGVH Trigger: ATGAACTCCCTCTACCTGGCAACTATTTCCTTGAAG...ACCTGCCTGTCTTCGTTGCTCTTCAGTGCTACACGCTGCCCATGCTGGTCCGAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | GTCAGGAATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGCTGTGGTCATCTCGATaGTTGAGGATGATCTCCAGT | + |
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Preference number: 4 (lower is better) Translates to: VRNLCGSYGSKVAPGASRLWSSR*LRMISS Trigger: ACTGGAGATCATCCTCAACCATCGAGATGACCACAG...CCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATTCCTGAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | TGGAGTCTCCCTTTAATGCTGTTCATCGGACCAGCATGGGCAGCGTGTAGCACTCACCACTGCCGTCATTaGTATCATCCCTTTGAGAGA | + |
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Preference number: 4 (lower is better) Translates to: WSLPLMLFIGPAWAACSTHHCRH*YHPFER Trigger: TCTCTCAAAGGGATGATACCAATGACGGCAGTGGTG...AGTGCTACACGCTGCCCATGCTGGTCCGATGAACAGCATTAAAGGGAGACTCCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | ACTGAAAGTAATAGGAGTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGCGCTTGATAAGGCAATaGGCGAGGGGCTTGCCAGAG | + |
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Preference number: 4 (lower is better) Translates to: TESNRSFTPWCVCVCVCVRLIRQ*ARGLPE Trigger: CTCTGGCAAGCCCCTCGCTCATTGCCTTATCAAGCG...CACACACACACACACACACACACACCAAGGAGTGAAACTCCTATTACTTTCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | TTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCTCTTGAATTCCAGACCAGCCGAAAGGCCGTaGGGATGGGGTCCTCGCTTG | + |
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Preference number: 4 (lower is better) Translates to: FGVTSENREITNILLNSRPAERP*GWGPRL Trigger: CAAGCGAGGACCCCATCCTCACGGCCTTTCGGCTGG...TCTGGAATTCAAGAGAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | GTCAGGAATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGTGTTCATCATGGCGATaGGCATATTCAGCAGCACTA | + |
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Preference number: 4 (lower is better) Translates to: VRNLCGSYGSKVAPGASRCSSWR*AYSAAL Trigger: TAGTGCTGCTGAATATGCTCATCGCCATGATGAACA...CCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATTCCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | GGGTGTGAGATCCTGAGGCATGTCAGGAATCTATGCGGCAGCTATGGTAGCAAACTGGTGATATTTGATTaGCACCTTCAGCTTGGCCAG | + |
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Preference number: 4 (lower is better) Translates to: GCEILRHVRNLCGSYGSKLVIFD*HLQLGQ Trigger: CTGGCCAAGCTGAAGGTGGCAATCAAATATCACCAG...TTTGCTACCATAGCTGCCGCATAGATTCCTGACATGCCTCAGGATCTCACACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | AGTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGCGAAGAGTGCTTCTaGAATCAGAGTCGGGTGCCA | + |
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Preference number: 4 (lower is better) Translates to: SFTPWCVCVCVCVCVCVCCEECF*NQSRVP Trigger: TGGCACCCGACTCTGATTGCAGAAGCACTCTTCGCA...ACACACACACACACACACACACACACACACACACACACACCAAGGAGTGAAACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | GGGAGGGAACCAAATTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCGGAGCAGATGCCGGATaGACAGTGAAGGGAGCTGGA | + |
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Preference number: 4 (lower is better) Translates to: GREPNLGSPLRTGKLQIFGADAG*TVKGAG Trigger: TCCAGCTCCCTTCACTGTGCATCCGGCATCTGCTCC...GAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAATTTGGTTCCCTCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | TGGAGTCTCCCTTTAATGCTGTTCATCGGACCAGCATGGGCAGCGTGTAGCACTTCAAGTTCTTCACTGTaGTCATCTCGATGGTTGAGG | + |
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Preference number: 4 (lower is better) Translates to: WSLPLMLFIGPAWAACSTSSSSL*SSRWLR Trigger: CCTCAACCATCGAGATGACCACAGTGAAGAACTTGA...AGTGCTACACGCTGCCCATGCTGGTCCGATGAACAGCATTAAAGGGAGACTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | GGGTGTGAGATCCTGAGGCATGTCAGGAATCTATGCGGCAGCTATGGTAGCAAATTGCCACCTTCAGCTTaGCCAGGTCATGATACTTCT | + |
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Preference number: 4 (lower is better) Translates to: GCEILRHVRNLCGSYGSKLPPSA*PGHDTS Trigger: AGAAGTATCATGACCTGGCCAAGCTGAAGGTGGCAA...TTTGCTACCATAGCTGCCGCATAGATTCCTGACATGCCTCAGGATCTCACACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | GTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCAGAGGCCCTAAATaGGAGTTGGCTGTGAACAAG | + |
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Preference number: 4 (lower is better) Translates to: VSLLGVCVCVCVCVCVCVCRGPK*ELAVNK Trigger: CTTGTTCACAGCCAACTCCCATTTAGGGCCTCTGCA...CACACACACACACACACACACACACACACACACACACACACCAAGGAGTGAAAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | GTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCCTCGTACTCAGCCTTaGACTCATTTTCCACTTTGC | + |
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Preference number: 4 (lower is better) Translates to: VSLLGVCVCVCVCVCVCVPRTQP*THFPLC Trigger: GCAAAGTGGAAAATGAGTTCAAGGCTGAGTACGAGG...CACACACACACACACACACACACACACACACACACACACACCAAGGAGTGAAAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | GTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGTTCTGACGATATGTTaGGAAGCCAGGAGAAGCATG | + |
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Preference number: 4 (lower is better) Translates to: VSLLGVCVCVCVCVCVCVVLTIC*EARRSM Trigger: CATGCTTCTCCTGGCTTCTCAACATATCGTCAGAAC...CACACACACACACACACACACACACACACACACACACACACCAAGGAGTGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | AAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTTCTCGGCCTCCTGCAGTaGCTGCTTCACTGTGGCATA | + |
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Preference number: 4 (lower is better) Translates to: KNGTERPVLPRNHKLTILLGLLQ*LLHCGI Trigger: TATGCCACAGTGAAGCAGGCACTGCAGGAGGCCGAG...AAGAATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | AATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGAGGCAAAAGCTTCTCAAGTTGTaGCTCCTTCGTCTTCCATCA | + |
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Preference number: 4 (lower is better) Translates to: NLCGSYGSKVAPGASRRQKLLKL*LLRLPS Trigger: TGATGGAAGACGAAGGAGGCACAACTTGAGAAGCTT...TTGCCTCCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | TTTAAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCCCGAGCCCCACCACTaGCGTCATTGGTATCATCCC | + |
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Preference number: 4 (lower is better) Translates to: FKNGTERPVLPRNHKLTIPEPHH*RHWYHP Trigger: GGGATGATACCAATGACGGCAGTGGTGGGGCTCGGG...AATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTTAAA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | GGGAGGGAACCAAATTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCGTGCCTGCTTCACTGTaGCATAGTCCCCCTTCTCCA | + |
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Preference number: 4 (lower is better) Translates to: GREPNLGSPLRTGKLQIFVPASL*HSPPSP Trigger: TGGAGAAGGGGGACTATGCCACAGTGAAGCAGGCAC...GAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAATTTGGTTCCCTCCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | AAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTTCAGTTGCAGCGGATCTaGTGGGGCCTTGGGATAGTG | + |
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Preference number: 4 (lower is better) Translates to: KNGTERPVLPRNHKLTILQLQRI*WGLGIV Trigger: CACTATCCCAAGGCCCCACCAGATCCGCTGCAACTG...AAGAATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | GTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTTTCTGGTGATATTTaGTTGCCACCTTCAGCTTGG | + |
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Preference number: 4 (lower is better) Translates to: VSLLGVCVCVCVCVCVCVLSGDI*LPPSAW Trigger: CCAAGCTGAAGGTGGCAATCAAATATCACCAGAAAG...CACACACACACACACACACACACACACACACACACACACACCAAGGAGTGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | TGGAGTCTCCCTTTAATGCTGTTCATCGGACCAGCATGGGCAGCGTGTAGCACTACAAACTCTTTCTGGTaGTATTTGATTGCCACCTTC | + |
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Preference number: 4 (lower is better) Translates to: WSLPLMLFIGPAWAACSTTNSFW*YLIATF Trigger: GAAGGTGGCAATCAAATATCACCAGAAAGAGTTTGT...AGTGCTACACGCTGCCCATGCTGGTCCGATGAACAGCATTAAAGGGAGACTCCA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | AAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTTTCAGCCCTCACGATTTaGAGGGGGATGCGATCTCTG | + |
|
Preference number: 4 (lower is better) Translates to: KNGTERPVLPRNHKLTILSALTI*RGMRSL Trigger: CAGAGATCGCATCCCCCTCCAAATCGTGAGGGCTGA...AAGAATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | GTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATCTACCTCCGAACTaGATACACACTCCACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: VSLLGVCVCVCVCVCVCVYLPPN*IHTPHS Trigger: ACTGTGTGGAGTGTGTATCCAGTTCGGAGGTAGATA...CACACACACACACACACACACACACACACACACACACACACCAAGGAGTGAAAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | AAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTTCTGGAGCTCCGAGCTTaGTCCAAGAGATCCTTGGCA | + |
|
Preference number: 4 (lower is better) Translates to: KNGTERPVLPRNHKLTILLELRA*SKRSLA Trigger: TGCCAAGGATCTCTTGGACCAAGCTCGGAGCTCCAG...AAGAATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | AATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGAGGCAAGTCATGATACTTCTGTaGGTCAAGTTCTTCACTGTG | + |
|
Preference number: 4 (lower is better) Translates to: NLCGSYGSKVAPGASRRQVMILL*VKFFTV Trigger: CACAGTGAAGAACTTGACCCACAGAAGTATCATGAC...TTGCCTCCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | TGGAGTCTCCCTTTAATGCTGTTCATCGGACCAGCATGGGCAGCGTGTAGCACTGCCCCTCATTTGTTTTaGAGTTTCTTATCATTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSLPLMLFIGPAWAACSTAPHLF*SFLSLQ Trigger: CTGCAATGATAAGAAACTCCAAAACAAATGAGGGGC...AGTGCTACACGCTGCCCATGCTGGTCCGATGAACAGCATTAAAGGGAGACTCCA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | TTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCTCTTGAATTCCAGACATTCTCAATGGCAATaGGCAGGGCGCTCCTGCCCA | + |
|
Preference number: 4 (lower is better) Translates to: FGVTSENREITNILLNSRHSQWQ*AGRSCP Trigger: TGGGCAGGAGCGCCCTGCTCATTGCCATTGAGAATG...TCTGGAATTCAAGAGAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | TTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCTCTTGAATTCCAGACTTTGCTCAGCTCCTTaGGTTCCCAGCCCAGCCGAA | + |
|
Preference number: 4 (lower is better) Translates to: FGVTSENREITNILLNSRLCSAP*VPSPAE Trigger: TTCGGCTGGGCTGGGAACTCAAGGAGCTGAGCAAAG...TCTGGAATTCAAGAGAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | GGGAGGGAACCAAATTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCCAGCATGACGTTCTGTaGAGCTTCTCAAGTTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: GREPNLGSPLRTGKLQIFQHDVL*SFSSCA Trigger: GGCACAACTTGAGAAGCTTCACAGAACGTCATGCTG...GAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAATTTGGTTCCCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | GGGAGGGAACCAAATTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCGCAATCAGAGTCGGGTaGCACATTTCCCATTCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: GREPNLGSPLRTGKLQIFAIRVG*HISHSS Trigger: GGAAGAATGGGAAATGTGGCACCCGACTCTGATTGC...GAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAATTTGGTTCCCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | AGTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTCATACAATGCTGCTGTaGGATGCCATCAGAGATTGT | + |
|
Preference number: 4 (lower is better) Translates to: SFTPWCVCVCVCVCVCVCHTMLL*DAIRDC Trigger: ACAATCTCTGATGGCATCGCACAGCAGCATTGTATG...ACACACACACACACACACACACACACACACACACACACACCAAGGAGTGAAACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | CTAGAAAAGACTGAAAGTAATAGGAGTTTCACTCCTTGGTGTGTGTGTGTGTGTCACCCCATTTGTGCATaGGCAAGTCACAAGCCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: LEKTESNRSFTPWCVCVCHPICA*ASHKPL Trigger: GAGAGGCTTGTGACTTGCTCATGCACAAATGGGGTG...ACACACACACACACACCAAGGAGTGAAACTCCTATTACTTTCAGTCTTTTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | AAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTTCCATCACCCCATTTGTaGATGAGCAAGTCACAAGCC | + |
|
Preference number: 4 (lower is better) Translates to: KNGTERPVLPRNHKLTILPSPHL*MSKSQA Trigger: GGCTTGTGACTTGCTCATGCACAAATGGGGTGATGG...AAGAATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | TTTAAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTTGTCCATCATCAGCGTaGGAACCTGCTTCTCTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: FKNGTERPVLPRNHKLTICPSSA*EPASLH Trigger: GTGGAGAGAAGCAGGTTCCCACGCTGATGATGGACA...AATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTTAAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | AAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTTGTGAACTCAGAGAACTaGGTGTCCATCATCAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: KNGTERPVLPRNHKLTILVNSEN*VSIISV Trigger: CACGCTGATGATGGACACCCAGTTCTCTGAGTTCAC...AAGAATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | CTAGAAAAGACTGAAAGTAATAGGAGTTTCACTCCTTGGTGTGTGTGTGTGTGTGATCTGGTGGGGCCTTaGGATAGTGACCCTCTTTTG | + |
|
Preference number: 4 (lower is better) Translates to: LEKTESNRSFTPWCVCVCDLVGP*DSDPLL Trigger: CAAAAGAGGGTCACTATCCCAAGGCCCCACCAGATC...ACACACACACACACACCAAGGAGTGAAACTCCTATTACTTTCAGTCTTTTCTAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | GTCAGGAATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGCTTCATATCGAAAGCTaGAAATGTCCTGCTTTAATT | + |
|
Preference number: 4 (lower is better) Translates to: VRNLCGSYGSKVAPGASRLHIES*KCPALI Trigger: AATTAAAGCAGGACATTTCCAGCTTTCGATATGAAG...CCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATTCCTGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | AGTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGAGATTGTGTACATTaGCTCCGAAGTAGGTTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SFTPWCVCVCVCVCVCVCRDCVH*LRSRFR Trigger: TCTGAACCTACTTCGGAGCCAATGTACACAATCTCT...ACACACACACACACACACACACACACACACACACACACACCAAGGAGTGAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | TTTAAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCAGCATGATCGGCAATaGGCTGGTAGGAGTTGTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FKNGTERPVLPRNHKLTIQHDRQ*AGRSCS Trigger: TGAACAACTCCTACCAGCTCATTGCCGATCATGCTG...AATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTTAAA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | AAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTTGGATATTGCGAAGAGTaGTTCTGCAATCAGAGTCGG | + |
|
Preference number: 4 (lower is better) Translates to: KNGTERPVLPRNHKLTILGYCEE*FCNQSR Trigger: CCGACTCTGATTGCAGAAGCACTCTTCGCAATATCC...AAGAATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | GGGAGGGAACCAAATTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCGAAACAGGAATCCAATaGTCATGCAGGTCAGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: GREPNLGSPLRTGKLQIFETGIQ*SCRSEA Trigger: AGCTTCTGACCTGCATGACCATTGGATTCCTGTTTC...GAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAATTTGGTTCCCTCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | AAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTTAGAAATCAGCACTGCTaGTGGAGAGGCTTCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: KNGTERPVLPRNHKLTILRNQHC*WRGFFL Trigger: CAAGAAGAAGCCTCTCCACCAGCAGTGCTGATTTCT...AAGAATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | ACTGAAAGTAATAGGAGTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGGCCAAGATAGAGAAATaGTTTGGGGCTGGGAATAAT | + |
|
Preference number: 4 (lower is better) Translates to: TESNRSFTPWCVCVCVCVAKIEK*FGAGNN Trigger: ATTATTCCCAGCCCCAAATCATTTCTCTATCTTGGC...CACACACACACACACACACACACACCAAGGAGTGAAACTCCTATTACTTTCAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | TTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCTCTTGAATTCCAGACGATTTGGAGGGGGATaGGATCTCTGTATGGTGAGT | + |
|
Preference number: 4 (lower is better) Translates to: FGVTSENREITNILLNSRRFGGG*DLCMVS Trigger: ACTCACCATACAGAGATCGCATCCCCCTCCAAATCG...TCTGGAATTCAAGAGAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | TTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCTCTTGAATTCCAGACCCACATACACACTGTaGTTCAGCAGTAGCTCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FGVTSENREITNILLNSRPTYTL*FSSSSM Trigger: CATGGAGCTACTGCTGAACCACAGTGTGTATGTGGG...TCTGGAATTCAAGAGAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | AAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTTGGTCCAAGAGATCCTTaGCAAAGAGCTTACATTGCT | + |
|
Preference number: 4 (lower is better) Translates to: KNGTERPVLPRNHKLTILGPRDP*QRAYIA Trigger: AGCAATGTAAGCTCTTTGCCAAGGATCTCTTGGACC...AAGAATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | CTAGAAAAGACTGAAAGTAATAGGAGTTTCACTCCTTGGTGTGTGTGTGTGTGTAATCAGCACTGCTGGTaGAGAGGCTTCTTCTTGGAT | + |
|
Preference number: 4 (lower is better) Translates to: LEKTESNRSFTPWCVCVCNQHCW*RGFFLD Trigger: ATCCAAGAAGAAGCCTCTCCACCAGCAGTGCTGATT...ACACACACACACACACCAAGGAGTGAAACTCCTATTACTTTCAGTCTTTTCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | TTTAAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTTTGGTATCATCCCTTTaGGAGAAATCAGCACTGCTG | + |
|
Preference number: 4 (lower is better) Translates to: FKNGTERPVLPRNHKLTILVSSL*EKSALL Trigger: CAGCAGTGCTGATTTCTCTCAAAGGGATGATACCAA...AATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | CTAGAAAAGACTGAAAGTAATAGGAGTTTCACTCCTTGGTGTGTGTGTGTGTGTGCAAAGAGCTTACATTaGTGGGAAAGTTCCTCGTAC | + |
|
Preference number: 4 (lower is better) Translates to: LEKTESNRSFTPWCVCVCAKSLH*WESSSY Trigger: GTACGAGGAACTTTCCCAGCAATGTAAGCTCTTTGC...ACACACACACACACACCAAGGAGTGAAACTCCTATTACTTTCAGTCTTTTCTAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR GCA 90 bp | TTTAAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTAAGGAGGTGGTAAGGTaGCACCTTCATCAAAGTAAC | + |
|
Preference number: 4 (lower is better) Translates to: FKNGTERPVLPRNHKLTIKEVVR*HLHQSN Trigger: GTTACTTTGATGAAGGTGGCACCTTACCACCTCCTT...AATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTTAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | AAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTTTTCCCATTCTTCCCTTaGACGAGAACCATTATACTT | + |
|
Preference number: 4 (lower is better) Translates to: KNGTERPVLPRNHKLTILFPFFP*TRTIIL Trigger: AAGTATAATGGTTCTCGTCCAAGGGAAGAATGGGAA...AAGAATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | CTAGAAAAGACTGAAAGTAATAGGAGTTTCACTCCTTGGTGTGTGTGTGTGTGTTGTATGGTGAGTAATTaGCCTTCTTGTAGTACAGCT | + |
|
Preference number: 4 (lower is better) Translates to: LEKTESNRSFTPWCVCVCCMVSN*PSCSTA Trigger: AGCTGTACTACAAGAAGGTCAATTACTCACCATACA...ACACACACACACACACCAAGGAGTGAAACTCCTATTACTTTCAGTCTTTTCTAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | TTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCTCTTGAATTCCAGAGAGAACCATTATACTTaGCATAGGCCACGATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: FGVTSENREITNILLNSRENHYT*HRPRSS Trigger: TGAAGATCGTGGCCTATGTCAAGTATAATGGTTCTC...TCTGGAATTCAAGAGAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR TCA 90 bp | TTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCTCTTGAATTCCAGACAGATGTTTGACCATTaGACTTGGAGAAGAAGAGAC | + |
|
Preference number: 4 (lower is better) Translates to: FGVTSENREITNILLNSRQMFDH*TWRRRD Trigger: GTCTCTTCTTCTCCAAGTTCAATGGTCAAACATCTG...TCTGGAATTCAAGAGAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | ACTGAAAGTAATAGGAGTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGAGGAACTTAAAATGTTaGATATTGCGAAGAGTGCTT | + |
|
Preference number: 4 (lower is better) Translates to: TESNRSFTPWCVCVCVCVRNLKC*ILRRVL Trigger: AAGCACTCTTCGCAATATCCAACATTTTAAGTTCCT...CACACACACACACACACACACACACCAAGGAGTGAAACTCCTATTACTTTCAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CCA 90 bp | TTTAAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTATAGTGACCCTCTTTTaGACAAGCAATTTGATGATT | + |
|
Preference number: 4 (lower is better) Translates to: FKNGTERPVLPRNHKLTIIVTLF*TSNLMI Trigger: AATCATCAAATTGCTTGTCCAAAAGAGGGTCACTAT...AATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTTAAA 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CCA 90 bp | CCCATGAAGGACCGTTTGCTCGACGACTCGGATTTTGGCTTTCCTTaGGCGCCACTAGCTCTTGGCACGGTTCTGATGAGCGGTGCACCG | + |
|
Preference number: 5 (lower is better) Translates to: PMKDRLLDDSDFGFP*APLALGTVLMSGAP Trigger: CGGTGCACCGCTCATCAGAACCGTGCCAAGAGCTAGTGGCGCCCAAGGAAAGCCAAAATCCGAGTCGTCGAGCAAACGGTCCTTCATGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CCA 90 bp | GCTCGACGACTCGGATTTTGGCTTTCCTTGGGCGCCACTAGCTCTTaGCACGGTTCTGATGAGCGGTGCACCGTGACAGGCCTTTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ARRLGFWLSLGATSS*HGSDERCTVTGLFL Trigger: AAGAAAAAGGCCTGTCACGGTGCACCGCTCATCAGAACCGTGCCAAGAGCTAGTGGCGCCCAAGGAAAGCCAAAATCCGAGTCGTCGAGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CAA 90 bp | GTCAGGAATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGACACACTCCACACAGTaGCAGCGGATCTGGTGGGGC | + |
|
Preference number: 5 (lower is better) Translates to: VRNLCGSYGSKVAPGASRTHSTQ*QRIWWG Trigger: GCCCCACCAGATCCGCTGCAACTGTGTGGAGTGTGT...CCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATTCCTGAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CAA 90 bp | TGGAGTCTCCCTTTAATGCTGTTCATCGGACCAGCATGGGCAGCGTGTAGCACTGAGACACTCTTAGACTaGGCCCGAGCCCCACCACTG | + |
|
Preference number: 5 (lower is better) Translates to: WSLPLMLFIGPAWAACSTETLLD*ARAPPL Trigger: CAGTGGTGGGGCTCGGGCCAAGTCTAAGAGTGTCTC...AGTGCTACACGCTGCCCATGCTGGTCCGATGAACAGCATTAAAGGGAGACTCCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS CCA 90 bp | GAAAGACGGACCCATGAAGGACCGTTTGCTCGACGACTCGGATTTTaGCTTTCCTTGGGCGCCACTAGCTCTTGGCACGGTTCTGATGAG | + |
|
Preference number: 5 (lower is better) Translates to: ERRTHEGPFARRLGF*LSLGATSSWHGSDE Trigger: CTCATCAGAACCGTGCCAAGAGCTAGTGGCGCCCAAGGAAAGCCAAAATCCGAGTCGTCGAGCAAACGGTCCTTCATGGGTCCGTCTTTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | TGGAGTCTCCCTTTAATGCTGTTCATCGGACCAGCATGGGCAGCGTGTAGCACTACTTTGCTCAGCTCCTaGAGTTCCCAGCCCAGCCGA | + |
|
Preference number: 5 (lower is better) Translates to: WSLPLMLFIGPAWAACSTTLLSS*SSQPSR Trigger: TCGGCTGGGCTGGGAACTCAAGGAGCTGAGCAAAGT...AGTGCTACACGCTGCCCATGCTGGTCCGATGAACAGCATTAAAGGGAGACTCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS TCA 90 bp | GACTTGGCCCGAGCCCCACCACTGCCGTCATTGGTATCATCCCTTTaGGAGAAATCAGCACTGCTGGTGGAGAGGCTTCTTCTTGGATGT | + |
|
Preference number: 5 (lower is better) Translates to: DLARAPPLPSLVSSL*EKSALLVERLLLGC Trigger: ACATCCAAGAAGAAGCCTCTCCACCAGCAGTGCTGATTTCTCTCAAAGGGATGATACCAATGACGGCAGTGGTGGGGCTCGGGCCAAGTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS GCA 90 bp | CTTTCCTTGGGCGCCACTAGCTCTTGGCACGGTTCTGATGAGCGGTaGACCGTGACAGGCCTTTTTCTTGCAGCCTACATTGAAAGAGAC | + |
|
Preference number: 5 (lower is better) Translates to: LSLGATSSWHGSDER*TVTGLFLAAYIERD Trigger: GTCTCTTTCAATGTAGGCTGCAAGAAAAAGGCCTGTCACGGTGCACCGCTCATCAGAACCGTGCCAAGAGCTAGTGGCGCCCAAGGAAAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS TCA 90 bp | TGGGCGCCACTAGCTCTTGGCACGGTTCTGATGAGCGGTGCACCGTaGCAGGCCTTTTTCTTGCAGCCTACATTGAAAGAGACACTCTTA | + |
|
Preference number: 5 (lower is better) Translates to: WAPLALGTVLMSGAP*QAFFLQPTLKETLL Trigger: TAAGAGTGTCTCTTTCAATGTAGGCTGCAAGAAAAAGGCCTGTCACGGTGCACCGCTCATCAGAACCGTGCCAAGAGCTAGTGGCGCCCA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS GCA 90 bp | ATACGTCCTCTGACGAGTCCAAAAGTTTCGAATTTGAGGAGCAGATaGCGGATGCACAGTGAAGGGAGCTGGAACAGGCTAGGGGGCACT | + |
|
Preference number: 5 (lower is better) Translates to: IRPLTSPKVSNLRSR*RMHSEGSWNRLGGT Trigger: AGTGCCCCCTAGCCTGTTCCAGCTCCCTTCACTGTGCATCCGGCATCTGCTCCTCAAATTCGAAACTTTTGGACTCGTCAGAGGACGTAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | GTCAGGAATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGGGGCTTGCCAGAGCCTaGTATATATTCAGTCGGGAC | + |
|
Preference number: 5 (lower is better) Translates to: VRNLCGSYGSKVAPGASRGLARA*YIFSRD Trigger: GTCCCGACTGAATATATACAAGGCTCTGGCAAGCCC...CCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATTCCTGAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | ATCGGACCAGCATGGGCAGCGTGTAGCACTGAAGAGCAACGAAGACAGGCAGGTGGTAGAGGGAGTTCATaGCAAAATCCATCAGGTTCC | + |
|
Preference number: 5 (lower is better) Translates to: IGPAWAACSTEEQRRQAGGRGSS*QNPSGS Trigger: GGAACCTGATGGATTTTGCAATGAACTCCCTCTACC...ACCTGCCTGTCTTCGTTGCTCTTCAGTGCTACACGCTGCCCATGCTGGTCCGAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | TGGAGTCTCCCTTTAATGCTGTTCATCGGACCAGCATGGGCAGCGTGTAGCACTCCCATGAAGGACCGTTaGCTCGACGACTCGGATTTT | + |
|
Preference number: 5 (lower is better) Translates to: WSLPLMLFIGPAWAACSTPMKDR*LDDSDF Trigger: AAAATCCGAGTCGTCGAGCAAACGGTCCTTCATGGG...AGTGCTACACGCTGCCCATGCTGGTCCGATGAACAGCATTAAAGGGAGACTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | GTCAGGAATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGGGCCCTAAATGGGAGTaGGCTGTGAACAAGGATATG | + |
|
Preference number: 5 (lower is better) Translates to: VRNLCGSYGSKVAPGASRGPKWE*AVNKDM Trigger: CATATCCTTGTTCACAGCCAACTCCCATTTAGGGCC...CCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATTCCTGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | TGGAGTCTCCCTTTAATGCTGTTCATCGGACCAGCATGGGCAGCGTGTAGCACTGGGCTGGGAATAATGTaGAAAGGAGGTGGTAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: WSLPLMLFIGPAWAACSTGLGIM*KGGGKV Trigger: CACCTTACCACCTCCTTTCAACATTATTCCCAGCCC...AGTGCTACACGCTGCCCATGCTGGTCCGATGAACAGCATTAAAGGGAGACTCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS TCA 90 bp | GAGGGGCTTGCCAGAGCCTTGTATATATTCAGTCGGGACCTAGAATaGCGTAGACTATCTACCTCCGAACTGGATACACACTCCACACAG | + |
|
Preference number: 5 (lower is better) Translates to: EGLARALYIFSRDLE*RRLSTSELDTHSTQ Trigger: CTGTGTGGAGTGTGTATCCAGTTCGGAGGTAGATAGTCTACGTCATTCTAGGTCCCGACTGAATATATACAAGGCTCTGGCAAGCCCCTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS GCA 90 bp | CTCCATCTGAGAATAGCGGATGTCCTGCCACATACAATGCTGCTGTaGGATGCCATCAGAGATTGTGTACATTGGCTCCGAAGTAGGTTC | + |
|
Preference number: 5 (lower is better) Translates to: LHLRIADVLPHTMLL*DAIRDCVHWLRSRF Trigger: GAACCTACTTCGGAGCCAATGTACACAATCTCTGATGGCATCGCACAGCAGCATTGTATGTGGCAGGACATCCGCTATTCTCAGATGGAG 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | GTCAGGAATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGTGTTCTGACGATATGTaGAGAAGCCAGGAGAAGCAT | + |
|
Preference number: 5 (lower is better) Translates to: VRNLCGSYGSKVAPGASRCSDDM*RSQEKH Trigger: ATGCTTCTCCTGGCTTCTCAACATATCGTCAGAACA...CCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATTCCTGAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | AGTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGTTGGGGGAGGTCCTaGAACATGGAGGTCTGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: SFTPWCVCVCVCVCVCVCSWGRS*NMEVCS Trigger: AGAACAGACCTCCATGTTCAAGGACCTCCCCCAACT...ACACACACACACACACACACACACACACACACACACACACCAAGGAGTGAAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | GTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGCGTGGAGAAGGCGTaGTTCTGTTTTTCACATCGG | + |
|
Preference number: 5 (lower is better) Translates to: VSLLGVCVCVCVCVCVCVSVEKA*FCFSHR Trigger: CCGATGTGAAAAACAGAACAACGCCTTCTCCACGCT...CACACACACACACACACACACACACACACACACACACACACCAAGGAGTGAAAC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | TGGAGTCTCCCTTTAATGCTGTTCATCGGACCAGCATGGGCAGCGTGTAGCACTAACTCATCCAGAGCTTaGTTCTCGCAAACTTCCACT | + |
|
Preference number: 5 (lower is better) Translates to: WSLPLMLFIGPAWAACSTNSSRA*FSQTST Trigger: AGTGGAAGTTTGCGAGAACAAAGCTCTGGATGAGTT...AGTGCTACACGCTGCCCATGCTGGTCCGATGAACAGCATTAAAGGGAGACTCCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS GCA 90 bp | CACCACTGCCGTCATTGGTATCATCCCTTTGAGAGAAATCAGCACTaGTGGTGGAGAGGCTTCTTCTTGGATGTTTCCTGTTTCCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: HHCRHWYHPFERNQH*WWRGFFLDVSCFPR Trigger: TCTTGGGAAACAGGAAACATCCAAGAAGAAGCCTCTCCACCAGCAGTGCTGATTTCTCTCAAAGGGATGATACCAATGACGGCAGTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS CCA 90 bp | CACTGCCGTCATTGGTATCATCCCTTTGAGAGAAATCAGCACTGCTaGTGGAGAGGCTTCTTCTTGGATGTTTCCTGTTTCCCAAGAGGT | + |
|
Preference number: 5 (lower is better) Translates to: HCRHWYHPFERNQHC*WRGFFLDVSCFPRG Trigger: ACCTCTTGGGAAACAGGAAACATCCAAGAAGAAGCCTCTCCACCAGCAGTGCTGATTTCTCTCAAAGGGATGATACCAATGACGGCAGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | AAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTTTCTGGAGCTCCGAGCTaGGTCCAAGAGATCCTTGGC | + |
|
Preference number: 5 (lower is better) Translates to: KNGTERPVLPRNHKLTILSGAPS*VQEILG Trigger: GCCAAGGATCTCTTGGACCAAGCTCGGAGCTCCAGA...AAGAATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CAA 90 bp | GTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGGAGAGGCTTCTTCTaGGATGTTTCCTGTTTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: VSLLGVCVCVCVCVCVCVWRGFF*DVSCFP Trigger: TGGGAAACAGGAAACATCCAAGAAGAAGCCTCTCCA...CACACACACACACACACACACACACACACACACACACACACCAAGGAGTGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | GTCAGGAATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGTTCTTGCAGCCTACATaGAAAGAGACACTCTTAGAC | + |
|
Preference number: 5 (lower is better) Translates to: VRNLCGSYGSKVAPGASRFLQPT*KETLLD Trigger: GTCTAAGAGTGTCTCTTTCAATGTAGGCTGCAAGAA...CCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATTCCTGAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | GGGTGTGAGATCCTGAGGCATGTCAGGAATCTATGCGGCAGCTATGGTAGCAAAAAGAGACCCAATTTCTaGAAAGACGGACCCATGAAG | + |
|
Preference number: 5 (lower is better) Translates to: GCEILRHVRNLCGSYGSKKRPNF*KDGPMK Trigger: CTTCATGGGTCCGTCTTTCAAGAAATTGGGTCTCTT...TTTGCTACCATAGCTGCCGCATAGATTCCTGACATGCCTCAGGATCTCACACCC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS GCA 90 bp | TTGGCAGTTTGGCTGAGCGACAAACTCTTTCTGGTGATATTTGATTaGCACCTTCAGCTTGGCCAGGTCATGATACTTCTGTGGGTCAAG | + |
|
Preference number: 5 (lower is better) Translates to: LAVWLSDKLFLVIFD*HLQLGQVMILLWVK Trigger: CTTGACCCACAGAAGTATCATGACCTGGCCAAGCTGAAGGTGGCAATCAAATATCACCAGAAAGAGTTTGTCGCTCAGCCAAACTGCCAA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | TTTAAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTCAGCCCTCACGATTaGGAGGGGGATGCGATCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FKNGTERPVLPRNHKLTILSPHD*EGDAIS Trigger: AGAGATCGCATCCCCCTCCAAATCGTGAGGGCTGAG...AATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTTAAA 48% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CAA 90 bp | AATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGAGGCAAATTGGTATCATCCCTTaGAGAGAAATCAGCACTGCT | + |
|
Preference number: 5 (lower is better) Translates to: NLCGSYGSKVAPGASRRQIGIIP*REISTA Trigger: AGCAGTGCTGATTTCTCTCAAAGGGATGATACCAAT...TTGCCTCCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | GTCAGGAATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGAGTAGGTTCAGATGTTaGACCATTGAACTTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: VRNLCGSYGSKVAPGASRSRFRC*TIELGE Trigger: TTCTCCAAGTTCAATGGTCAAACATCTGAACCTACT...CCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATTCCTGAC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CAA 90 bp | AATCTATGCGGCAGCTATGGTAGCAAAGTGGCACCTGGAGCTTCAAGGAGGCAAGATAGTGACCCTCTTTaGGACAAGCAATTTGATGAT | + |
|
Preference number: 5 (lower is better) Translates to: NLCGSYGSKVAPGASRRQDSDPL*DKQFDD Trigger: ATCATCAAATTGCTTGTCCAAAAGAGGGTCACTATC...TTGCCTCCTTGAAGCTCCAGGTGCCACTTTGCTACCATAGCTGCCGCATAGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CAA 90 bp | GGGTGTGAGATCCTGAGGCATGTCAGGAATCTATGCGGCAGCTATGGTAGCAAACTGATAATGTTGATTTaGTATCAGGCTGTCAGCATG | + |
|
Preference number: 5 (lower is better) Translates to: GCEILRHVRNLCGSYGSKLIMLI*YQAVSM Trigger: CATGCTGACAGCCTGATACAAAATCAACATTATCAG...TTTGCTACCATAGCTGCCGCATAGATTCCTGACATGCCTCAGGATCTCACACCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CAA 90 bp | TTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCTCTTGAATTCCAGATCGACGACTCGGATTTaGGCTTTCCTTGGGCGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: FGVTSENREITNILLNSRSTTRI*AFLGRH Trigger: GTGGCGCCCAAGGAAAGCCAAAATCCGAGTCGTCGA...TCTGGAATTCAAGAGAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CAA 90 bp | GGGAGGGAACCAAATTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCGAGCCGAGTTGTAACTaGTTCTTCCTGTCCATCACC | + |
|
Preference number: 5 (lower is better) Translates to: GREPNLGSPLRTGKLQIFEPSCN*FFLSIT Trigger: GGTGATGGACAGGAAGAACAAGTTACAACTCGGCTC...GAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAATTTGGTTCCCTCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CCA 90 bp | ATATCAAGCAGCATTCGTCCCAAAGAGATCTGCAGAGGCCCTAAATaGGAGTTGGCTGTGAACAAGGATATGAGACGCAAGGAACTTAAA | + |
|
Preference number: 5 (lower is better) Translates to: ISSSIRPKEICRGPK*ELAVNKDMRRKELK Trigger: TTTAAGTTCCTTGCGTCTCATATCCTTGTTCACAGCCAACTCCCATTTAGGGCCTCTGCAGATCTCTTTGGGACGAATGCTGCTTGATAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CCA 90 bp | CCACATACAATGCTGCTGTGCGATGCCATCAGAGATTGTGTACATTaGCTCCGAAGTAGGTTCAGATGTTTGACCATTGAACTTGGAGAA | + |
|
Preference number: 5 (lower is better) Translates to: PHTMLLCDAIRDCVH*LRSRFRCLTIELGE Trigger: TTCTCCAAGTTCAATGGTCAAACATCTGAACCTACTTCGGAGCCAATGTACACAATCTCTGATGGCATCGCACAGCAGCATTGTATGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS-3UTR CAA 90 bp | AGTTTCACTCCTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTCCCATTCTTCCCTaGGACGAGAACCATTATACT | + |
|
Preference number: 5 (lower is better) Translates to: SFTPWCVCVCVCVCVCVCFPILP*DENHYT Trigger: AGTATAATGGTTCTCGTCCAAGGGAAGAATGGGAAA...ACACACACACACACACACACACACACACACACACACACACCAAGGAGTGAAACT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | GGGAGGGAACCAAATTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCCGGATCCCCTTGCAGTaGTTAGGTTCATCAATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: GREPNLGSPLRTGKLQIFRIPLQ*LGSSIA Trigger: AGCTATTGATGAACCTAACAACTGCAAGGGGATCCG...GAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAATTTGGTTCCCTCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | AAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTTCCATCAGGGTCTCTTTaGGGACAGAAGGTGTTGTTG | + |
|
Preference number: 5 (lower is better) Translates to: KNGTERPVLPRNHKLTILPSGSL*GQKVLL Trigger: CAACAACACCTTCTGTCCCAAAAGAGACCCTGATGG...AAGAATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS GCA 90 bp | AAAATGTTGGATATTGCGAAGAGTGCTTCTGCAATCAGAGTCGGGTaGCACATTTCCCATTCTTCCCTTGGACGAGAACCATTATACTTG | + |
|
Preference number: 5 (lower is better) Translates to: KMLDIAKSASAIRVG*HISHSSLGREPLYL Trigger: CAAGTATAATGGTTCTCGTCCAAGGGAAGAATGGGAAATGTGGCACCCGACTCTGATTGCAGAAGCACTCTTCGCAATATCCAACATTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS GCA 90 bp | AGAACCATTATACTTGACATAGGCCACGATCTTCAAGGAAATAGTTaGCAGGTAGAGGGAGTTCATTGCAAAATCCATCAGGTTCCACCA | + |
|
Preference number: 5 (lower is better) Translates to: RTIILDIGHDLQGNS*QVEGVHCKIHQVPP Trigger: TGGTGGAACCTGATGGATTTTGCAATGAACTCCCTCTACCTGGCAACTATTTCCTTGAAGATCGTGGCCTATGTCAAGTATAATGGTTCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS GCA 90 bp | AAGAGAAATTTGAGTATATCAAGCAGCATTCGTCCCAAAGAGATCTaGAGAGGCCCTAAATGGGAGTTGGCTGTGAACAAGGATATGAGA | + |
|
Preference number: 5 (lower is better) Translates to: KRNLSISSSIRPKEI*RGPKWELAVNKDMR Trigger: TCTCATATCCTTGTTCACAGCCAACTCCCATTTAGGGCCTCTGCAGATCTCTTTGGGACGAATGCTGCTTGATATACTCAAATTTCTCTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | TTTAAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTATGAAAAGCCCAAGGTaGCTTCTGGGTGAGATCAGA | + |
|
Preference number: 5 (lower is better) Translates to: FKNGTERPVLPRNHKLTIMKSPR*LLGEIR Trigger: TCTGATCTCACCCAGAAGCAACCTTGGGCTTTTCAT...AATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTTAAA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | TTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCTCTTGAATTCCAGAGTGAAGCTTCTCAAGTaGTGCCTCCTTCGTCTTCCA | + |
|
Preference number: 5 (lower is better) Translates to: FGVTSENREITNILLNSRVKLLK*CLLRLP Trigger: TGGAAGACGAAGGAGGCACAACTTGAGAAGCTTCAC...TCTGGAATTCAAGAGAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS TCA 90 bp | CCATCAGAGATTGTGTACATTGGCTCCGAAGTAGGTTCAGATGTTTaGCCATTGAACTTGGAGAAGAAGAGACCCAATTTCTTGAAAGAC | + |
|
Preference number: 5 (lower is better) Translates to: PSEIVYIGSEVGSDV*PLNLEKKRPNFLKD Trigger: GTCTTTCAAGAAATTGGGTCTCTTCTTCTCCAAGTTCAATGGTCAAACATCTGAACCTACTTCGGAGCCAATGTACACAATCTCTGATGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | TTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCTCTTGAATTCCAGATGGTCATCTCGATGGTaGAGGATGATCTCCAGTTCT | + |
|
Preference number: 5 (lower is better) Translates to: FGVTSENREITNILLNSRWSSRW*RMISSS Trigger: AGAACTGGAGATCATCCTCAACCATCGAGATGACCA...TCTGGAATTCAAGAGAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | TTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCTCTTGAATTCCAGATCACATCGGATCCCCTaGCAGTTGTTAGGTTCATCA | + |
|
Preference number: 5 (lower is better) Translates to: FGVTSENREITNILLNSRSHRIP*QLLGSS Trigger: TGATGAACCTAACAACTGCAAGGGGATCCGATGTGA...TCTGGAATTCAAGAGAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | TTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCTCTTGAATTCCAGATTGGGACAGAAGGTGTaGTTGAACCAGTTGCCAAGA | + |
|
Preference number: 5 (lower is better) Translates to: FGVTSENREITNILLNSRLGQKV*LNQLPR Trigger: TCTTGGCAACTGGTTCAACAACACCTTCTGTCCCAA...TCTGGAATTCAAGAGAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | AAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTTAACTTCCTGATAATGTaGATTTTGTATCAGGCTGTC | + |
|
Preference number: 5 (lower is better) Translates to: KNGTERPVLPRNHKLTILNFLIM*ILYQAV Trigger: GACAGCCTGATACAAAATCAACATTATCAGGAAGTT...AAGAATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | TTTAAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTCTGTTAGCCCCTCATTaGTTTTGGAGTTTCTTATCA | + |
|
Preference number: 5 (lower is better) Translates to: FKNGTERPVLPRNHKLTILLAPH*FWSFLS Trigger: TGATAAGAAACTCCAAAACAAATGAGGGGCTAACAG...AATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTTAAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | TTTAAAAACGGAACGGAAAGGCCAGTTCTACCTAGAAACCACAAGCTGACAATTAAGGAACTTAAAATGTaGGATATTGCGAAGAGTGCT | + |
|
Preference number: 5 (lower is better) Translates to: FKNGTERPVLPRNHKLTIKELKM*DIAKSA Trigger: AGCACTCTTCGCAATATCCAACATTTTAAGTTCCTT...AATTGTCAGCTTGTGGTTTCTAGGTAGAACTGGCCTTTCCGTTCCGTTTTTAAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS-3UTR CAA 90 bp | TTTGGGGTCACCTCTGAGAACAGGGAAATTACAAATATTCTCTTGAATTCCAGATTAATAAAGGGTTTCTaGATGAAAAGCCCAAGGTTG | + |
|
Preference number: 5 (lower is better) Translates to: FGVTSENREITNILLNSRLIKGF*MKSPRL Trigger: CAACCTTGGGCTTTTCATCAAGAAACCCTTTATTAA...TCTGGAATTCAAGAGAATATTTGTAATTTCCCTGTTCTCAGAGGTGACCCCAAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS CCA 72 bp | TTGAGGAGCAGATGCCGGATGCACAGTGAAGGGAGCTaGAACAGGCTAGGGGGCACTCACTGCTCCGAGCAG | + |
|
Preference number: 6 (lower is better) Translates to: LRSRCRMHSEGS*NRLGGTHCSEQ Trigger: CTGCTCGGAGCAGTGAGTGCCCCCTAGCCTGTTCCAGCTCCCTTCACTGTGCATCCGGCATCTGCTCCTCAA 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
||
| CDS CCA 72 bp | CTCGGATTTTGGCTTTCCTTGGGCGCCACTAGCTCTTaGCACGGTTCTGATGAGCGGTGCACCGTGACAGGC | + |
|
Preference number: 6 (lower is better) Translates to: LGFWLSLGATSS*HGSDERCTVTG Trigger: GCCTGTCACGGTGCACCGCTCATCAGAACCGTGCCAAGAGCTAGTGGCGCCCAAGGAAAGCCAAAATCCGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 90 bp | ACCCATGAAGGACCGTTTGCTCGACGACTCGGATTTTGGCTTTCCTaGGGCGCCACTAGCTCTTGGCACGGTTCTGATGAGCGGTGCACC | + |
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Preference number: 6 (lower is better) Translates to: THEGPFARRLGFWLS*GATSSWHGSDERCT Trigger: GGTGCACCGCTCATCAGAACCGTGCCAAGAGCTAGTGGCGCCCAAGGAAAGCCAAAATCCGAGTCGTCGAGCAAACGGTCCTTCATGGGT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS GCA 72 bp | GGCGCCACTAGCTCTTGGCACGGTTCTGATGAGCGGTaGACCGTGACAGGCCTTTTTCTTGCAGCCTACATT | + |
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Preference number: 6 (lower is better) Translates to: GATSSWHGSDER*TVTGLFLAAYI Trigger: AATGTAGGCTGCAAGAAAAAGGCCTGTCACGGTGCACCGCTCATCAGAACCGTGCCAAGAGCTAGTGGCGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CCA 72 bp | GACCGTTTGCTCGACGACTCGGATTTTGGCTTTCCTTaGGCGCCACTAGCTCTTGGCACGGTTCTGATGAGC | + |
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Preference number: 6 (lower is better) Translates to: DRLLDDSDFGFP*APLALGTVLMS Trigger: GCTCATCAGAACCGTGCCAAGAGCTAGTGGCGCCCAAGGAAAGCCAAAATCCGAGTCGTCGAGCAAACGGTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CCA 72 bp | ACCCATGAAGGACCGTTTGCTCGACGACTCGGATTTTaGCTTTCCTTGGGCGCCACTAGCTCTTGGCACGGT | + |
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Preference number: 6 (lower is better) Translates to: THEGPFARRLGF*LSLGATSSWHG Trigger: ACCGTGCCAAGAGCTAGTGGCGCCCAAGGAAAGCCAAAATCCGAGTCGTCGAGCAAACGGTCCTTCATGGGT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 72 bp | GGACCGTTTGCTCGACGACTCGGATTTTGGCTTTCCTaGGGCGCCACTAGCTCTTGGCACGGTTCTGATGAG | + |
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Preference number: 6 (lower is better) Translates to: GPFARRLGFWLS*GATSSWHGSDE Trigger: CTCATCAGAACCGTGCCAAGAGCTAGTGGCGCCCAAGGAAAGCCAAAATCCGAGTCGTCGAGCAAACGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 72 bp | CTATCTACCTCCGAACTGGATACACACTCCACACAGTaGCAGCGGATCTGGTGGGGCCTTGGGATAGTGACC | + |
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Preference number: 6 (lower is better) Translates to: LSTSELDTHSTQ*QRIWWGLGIVT Trigger: GGTCACTATCCCAAGGCCCCACCAGATCCGCTGCAACTGTGTGGAGTGTGTATCCAGTTCGGAGGTAGATAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 90 bp | AGACTTGGCCCGAGCCCCACCACTGCCGTCATTGGTATCATCCCTTaGAGAGAAATCAGCACTGCTGGTGGAGAGGCTTCTTCTTGGATG | + |
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Preference number: 6 (lower is better) Translates to: RLGPSPTTAVIGIIP*REISTAGGEASSWM Trigger: CATCCAAGAAGAAGCCTCTCCACCAGCAGTGCTGATTTCTCTCAAAGGGATGATACCAATGACGGCAGTGGTGGGGCTCGGGCCAAGTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CCA 72 bp | GCAGAAGTTCCACAGCTCCTACCACCTCCTTGCGGATaGCGTAGAGTAATGCATCGCCCACATACACACTGT | + |
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Preference number: 6 (lower is better) Translates to: AEVPQLLPPPCG*RRVMHRPHTHC Trigger: ACAGTGTGTATGTGGGCGATGCATTACTCTACGCCATCCGCAAGGAGGTGGTAGGAGCTGTGGAACTTCTGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CCA 72 bp | TTCTCCGCCATCCAGGGAAGCCATCGTACCACAAGGTaGCTAGCAATTGTTGGCAGTTTGGCTGAGCGACAA | + |
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Preference number: 6 (lower is better) Translates to: FSAIQGSHRTTR*LAIVGSLAERQ Trigger: TTGTCGCTCAGCCAAACTGCCAACAATTGCTAGCCACCTTGTGGTACGATGGCTTCCCTGGATGGCGGAGAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS TCA 72 bp | CTAGCTCTTGGCACGGTTCTGATGAGCGGTGCACCGTaGCAGGCCTTTTTCTTGCAGCCTACATTGAAAGAG | + |
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Preference number: 6 (lower is better) Translates to: LALGTVLMSGAP*QAFFLQPTLKE Trigger: CTCTTTCAATGTAGGCTGCAAGAAAAAGGCCTGTCACGGTGCACCGCTCATCAGAACCGTGCCAAGAGCTAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 72 bp | CCCAATTTCTTGAAAGACGGACCCATGAAGGACCGTTaGCTCGACGACTCGGATTTTGGCTTTCCTTGGGCG | + |
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Preference number: 6 (lower is better) Translates to: PNFLKDGPMKDR*LDDSDFGFPWA Trigger: CGCCCAAGGAAAGCCAAAATCCGAGTCGTCGAGCAAACGGTCCTTCATGGGTCCGTCTTTCAAGAAATTGGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 90 bp | GACAGCATAGGAAACAGGAATCCAATGGTCATGCAGGTCAGAAGCTaGACTACCCAGTGTTTTCTCCGCCATCCAGGGAAGCCATCGTAC | + |
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Preference number: 6 (lower is better) Translates to: DSIGNRNPMVMQVRS*TTQCFLRHPGKPSY Trigger: GTACGATGGCTTCCCTGGATGGCGGAGAAAACACTGGGTAGTCAAGCTTCTGACCTGCATGACCATTGGATTCCTGTTTCCTATGCTGTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 90 bp | AAGAAGAGACCCAATTTCTTGAAAGACGGACCCATGAAGGACCGTTaGCTCGACGACTCGGATTTTGGCTTTCCTTGGGCGCCACTAGCT | + |
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Preference number: 6 (lower is better) Translates to: KKRPNFLKDGPMKDR*LDDSDFGFPWAPLA Trigger: AGCTAGTGGCGCCCAAGGAAAGCCAAAATCCGAGTCGTCGAGCAAACGGTCCTTCATGGGTCCGTCTTTCAAGAAATTGGGTCTCTTCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS GCA 72 bp | CTGACGAGTCCAAAAGTTTCGAATTTGAGGAGCAGATaGCGGATGCACAGTGAAGGGAGCTGGAACAGGCTA | + |
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Preference number: 6 (lower is better) Translates to: LTSPKVSNLRSR*RMHSEGSWNRL Trigger: TAGCCTGTTCCAGCTCCCTTCACTGTGCATCCGGCATCTGCTCCTCAAATTCGAAACTTTTGGACTCGTCAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 72 bp | TTCTTGCAGCCTACATTGAAAGAGACACTCTTAGACTaGGCCCGAGCCCCACCACTGCCGTCATTGGTATCA | + |
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Preference number: 6 (lower is better) Translates to: FLQPTLKETLLD*ARAPPLPSLVS Trigger: TGATACCAATGACGGCAGTGGTGGGGCTCGGGCCAAGTCTAAGAGTGTCTCTTTCAATGTAGGCTGCAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 90 bp | ACAGTTGCAGCGGATCTGGTGGGGCCTTGGGATAGTGACCCTCTTTaGGACAAGCAATTTGATGATTTCATAGTTGTTGGTGTGGGCTGC | + |
|
Preference number: 6 (lower is better) Translates to: TVAADLVGPWDSDPL*DKQFDDFIVVGVGC Trigger: GCAGCCCACACCAACAACTATGAAATCATCAAATTGCTTGTCCAAAAGAGGGTCACTATCCCAAGGCCCCACCAGATCCGCTGCAACTGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 90 bp | AGTTGGGGGAGGTCCTTGAACATGGAGGTCTGTTCTGACGATATGTaGAGAAGCCAGGAGAAGCATGAAGAGGAAGGTCAGATAGGATGC | + |
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Preference number: 6 (lower is better) Translates to: SWGRSLNMEVCSDDM*RSQEKHEEEGQIGC Trigger: GCATCCTATCTGACCTTCCTCTTCATGCTTCTCCTGGCTTCTCAACATATCGTCAGAACAGACCTCCATGTTCAAGGACCTCCCCCAACT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 90 bp | AACCCAAGGCAGTATCATCCATTCCACAACAGTTGGGGGAGGTCCTaGAACATGGAGGTCTGTTCTGACGATATGTTGAGAAGCCAGGAG | + |
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Preference number: 6 (lower is better) Translates to: NPRQYHPFHNSWGRS*NMEVCSDDMLRSQE Trigger: CTCCTGGCTTCTCAACATATCGTCAGAACAGACCTCCATGTTCAAGGACCTCCCCCAACTGTTGTGGAATGGATGATACTGCCTTGGGTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS TCA 72 bp | CCTCACGATTTGGAGGGGGATGCGATCTCTGTATGGTaGGTAATTGACCTTCTTGTAGTACAGCTGGGCCAT | + |
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Preference number: 6 (lower is better) Translates to: PHDLEGDAISVW*VIDLLVVQLGH Trigger: ATGGCCCAGCTGTACTACAAGAAGGTCAATTACTCACCATACAGAGATCGCATCCCCCTCCAAATCGTGAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS TCA 72 bp | AGATTTAGGAGGCCAAAGACAGACCAGAAGAGCGACTaGAGGGTTTCAAAGAGCGTGGAGAAGGCGTTGTTC | + |
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Preference number: 6 (lower is better) Translates to: RFRRPKTDQKSD*RVSKSVEKALF Trigger: GAACAACGCCTTCTCCACGCTCTTTGAAACCCTTCAGTCGCTCTTCTGGTCTGTCTTTGGCCTCCTAAATCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS GCA 72 bp | GATATTGCGAAGAGTGCTTCTGCAATCAGAGTCGGGTaGCACATTTCCCATTCTTCCCTTGGACGAGAACCA | + |
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Preference number: 6 (lower is better) Translates to: DIAKSASAIRVG*HISHSSLGREP Trigger: TGGTTCTCGTCCAAGGGAAGAATGGGAAATGTGGCACCCGACTCTGATTGCAGAAGCACTCTTCGCAATATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 72 bp | CGTCCCAAAGAGATCTGCAGAGGCCCTAAATGGGAGTaGGCTGTGAACAAGGATATGAGACGCAAGGAACTT | + |
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Preference number: 6 (lower is better) Translates to: RPKEICRGPKWE*AVNKDMRRKEL Trigger: AAGTTCCTTGCGTCTCATATCCTTGTTCACAGCCAACTCCCATTTAGGGCCTCTGCAGATCTCTTTGGGACG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS GCA 72 bp | GCTTGGTCCAAGAGATCCTTGGCAAAGAGCTTACATTaGTGGGAAAGTTCCTCGTACTCAGCCTTGAACTCA | + |
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Preference number: 6 (lower is better) Translates to: AWSKRSLAKSLH*WESSSYSALNS Trigger: TGAGTTCAAGGCTGAGTACGAGGAACTTTCCCAGCAATGTAAGCTCTTTGCCAAGGATCTCTTGGACCAAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 72 bp | AGCTTGGTCCAAGAGATCCTTGGCAAAGAGCTTACATaGCTGGGAAAGTTCCTCGTACTCAGCCTTGAACTC | + |
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Preference number: 6 (lower is better) Translates to: SLVQEILGKELT*LGKFLVLSLEL Trigger: GAGTTCAAGGCTGAGTACGAGGAACTTTCCCAGCAATGTAAGCTCTTTGCCAAGGATCTCTTGGACCAAGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 72 bp | AGGTCCTTGAACATGGAGGTCTGTTCTGACGATATGTaGAGAAGCCAGGAGAAGCATGAAGAGGAAGGTCAG | + |
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Preference number: 6 (lower is better) Translates to: RSLNMEVCSDDM*RSQEKHEEEGQ Trigger: CTGACCTTCCTCTTCATGCTTCTCCTGGCTTCTCAACATATCGTCAGAACAGACCTCCATGTTCAAGGACCT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 72 bp | AAGTTGTGCCTCCTTCGTCTTCCATCAGGGTCTCTTTaGGGACAGAAGGTGTTGTTGAACCAGTTGCCAAGA | + |
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Preference number: 6 (lower is better) Translates to: KLCLLRLPSGSL*GQKVLLNQLPR Trigger: TCTTGGCAACTGGTTCAACAACACCTTCTGTCCCAAAAGAGACCCTGATGGAAGACGAAGGAGGCACAACTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 90 bp | CATCCCTTTGAGAGAAATCAGCACTGCTGGTGGAGAGGCTTCTTCTaGGATGTTTCCTGTTTCCCAAGAGGTCAAGCACTTCATATCGAA | + |
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Preference number: 6 (lower is better) Translates to: HPFERNQHCWWRGFF*DVSCFPRGQALHIE Trigger: TTCGATATGAAGTGCTTGACCTCTTGGGAAACAGGAAACATCCAAGAAGAAGCCTCTCCACCAGCAGTGCTGATTTCTCTCAAAGGGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS TCA 72 bp | GCCAGAGCCTTGTATATATTCAGTCGGGACCTAGAATaGCGTAGACTATCTACCTCCGAACTGGATACACAC | + |
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Preference number: 6 (lower is better) Translates to: ARALYIFSRDLE*RRLSTSELDTH Trigger: GTGTGTATCCAGTTCGGAGGTAGATAGTCTACGTCATTCTAGGTCCCGACTGAATATATACAAGGCTCTGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS GCA 72 bp | GTTGTAACTTGTTCTTCCTGTCCATCACCCCATTTGTaGATGAGCAAGTCACAAGCCTCTCCCCAAGTTTCA | + |
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Preference number: 6 (lower is better) Translates to: VVTCSSCPSPHL*MSKSQASPQVS Trigger: TGAAACTTGGGGAGAGGCTTGTGACTTGCTCATGCACAAATGGGGTGATGGACAGGAAGAACAAGTTACAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CCA 72 bp | AATCAGAGTCGGGTGCCACATTTCCCATTCTTCCCTTaGACGAGAACCATTATACTTGACATAGGCCACGAT | + |
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Preference number: 6 (lower is better) Translates to: NQSRVPHFPFFP*TRTIILDIGHD Trigger: ATCGTGGCCTATGTCAAGTATAATGGTTCTCGTCCAAGGGAAGAATGGGAAATGTGGCACCCGACTCTGATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 72 bp | GCGGATCTGGTGGGGCCTTGGGATAGTGACCCTCTTTaGGACAAGCAATTTGATGATTTCATAGTTGTTGGT | + |
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Preference number: 6 (lower is better) Translates to: ADLVGPWDSDPL*DKQFDDFIVVG Trigger: ACCAACAACTATGAAATCATCAAATTGCTTGTCCAAAAGAGGGTCACTATCCCAAGGCCCCACCAGATCCGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 72 bp | CAGTATCATCCATTCCACAACAGTTGGGGGAGGTCCTaGAACATGGAGGTCTGTTCTGACGATATGTTGAGA | + |
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Preference number: 6 (lower is better) Translates to: QYHPFHNSWGRS*NMEVCSDDMLR Trigger: TCTCAACATATCGTCAGAACAGACCTCCATGTTCAAGGACCTCCCCCAACTGTTGTGGAATGGATGATACTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS TCA 72 bp | AGTTTGGCTGAGCGACAAACTCTTTCTGGTGATATTTaGTTGCCACCTTCAGCTTGGCCAGGTCATGATACT | + |
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Preference number: 6 (lower is better) Translates to: SLAERQTLSGDI*LPPSAWPGHDT Trigger: AGTATCATGACCTGGCCAAGCTGAAGGTGGCAATCAAATATCACCAGAAAGAGTTTGTCGCTCAGCCAAACT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS TCA 72 bp | TTCCATCAGGGTCTCTTTTGGGACAGAAGGTGTTGTTaGACCAGTTGCCAAGATAGAGAAATGATTTGGGGC | + |
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Preference number: 6 (lower is better) Translates to: FHQGLFWDRRCC*TSCQDREMIWG Trigger: GCCCCAAATCATTTCTCTATCTTGGCAACTGGTTCAACAACACCTTCTGTCCCAAAAGAGACCCTGATGGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CCA 72 bp | TGGTCCAAGAGATCCTTGGCAAAGAGCTTACATTGCTaGGAAAGTTCCTCGTACTCAGCCTTGAACTCATTT | + |
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Preference number: 6 (lower is better) Translates to: WSKRSLAKSLHC*ESSSYSALNSF Trigger: AAATGAGTTCAAGGCTGAGTACGAGGAACTTTCCCAGCAATGTAAGCTCTTTGCCAAGGATCTCTTGGACCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CCA 72 bp | ATGCTGCTGTGCGATGCCATCAGAGATTGTGTACATTaGCTCCGAAGTAGGTTCAGATGTTTGACCATTGAA | + |
|
Preference number: 6 (lower is better) Translates to: MLLCDAIRDCVH*LRSRFRCLTIE Trigger: TTCAATGGTCAAACATCTGAACCTACTTCGGAGCCAATGTACACAATCTCTGATGGCATCGCACAGCAGCAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 72 bp | GAGAAGGCGTTGTTCTGTTTTTCACATCGGATCCCCTaGCAGTTGTTAGGTTCATCAATAGCTCTGGTCTCA | + |
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Preference number: 6 (lower is better) Translates to: EKALFCFSHRIP*QLLGSSIALVS Trigger: TGAGACCAGAGCTATTGATGAACCTAACAACTGCAAGGGGATCCGATGTGAAAAACAGAACAACGCCTTCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 90 bp | GCCATCAGAGATTGTGTACATTGGCTCCGAAGTAGGTTCAGATGTTaGACCATTGAACTTGGAGAAGAAGAGACCCAATTTCTTGAAAGA | + |
|
Preference number: 6 (lower is better) Translates to: AIRDCVHWLRSRFRC*TIELGEEETQFLER Trigger: TCTTTCAAGAAATTGGGTCTCTTCTTCTCCAAGTTCAATGGTCAAACATCTGAACCTACTTCGGAGCCAATGTACACAATCTCTGATGGC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS TCA 72 bp | ATTGTGTACATTGGCTCCGAAGTAGGTTCAGATGTTTaGCCATTGAACTTGGAGAAGAAGAGACCCAATTTC | + |
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Preference number: 6 (lower is better) Translates to: IVYIGSEVGSDV*PLNLEKKRPNF Trigger: GAAATTGGGTCTCTTCTTCTCCAAGTTCAATGGTCAAACATCTGAACCTACTTCGGAGCCAATGTACACAAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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| CDS CAA 72 bp | GATTGTGTACATTGGCTCCGAAGTAGGTTCAGATGTTaGACCATTGAACTTGGAGAAGAAGAGACCCAATTT | + |
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Preference number: 6 (lower is better) Translates to: DCVHWLRSRFRC*TIELGEEETQF Trigger: AAATTGGGTCTCTTCTTCTCCAAGTTCAATGGTCAAACATCTGAACCTACTTCGGAGCCAATGTACACAATC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000040184.4 |
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