Pregenerated sensors for TRPC4 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027748Ensembl transcript IDs: ENSMUST00000029311.11, ENSMUST00000200048.5, ENSMUST00000200341.2
Found 242 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CCACCAGGGCGGAACCATTGCTTAGGTTATGTCTCTCGGAGGCAATaGCTGCCGACCGCGGGTGGATCAGAGTGGTTAAATCAAAGAGGC | + |
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Preference number: 1 (lower is better) Translates to: PPGRNHCLGYVSRRQ*LPTAGGSEWLNQRG Trigger: GCCTCTTTGATTTAACCACTCTGATCCACCCGCGGTCGGCAGCCATTGCCTCCGAGAGACATAACCTAAGCAATGGTTCCGCCCTGGTGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR GCA 90 bp | CTCCTCCGTCAAGCCTTCTTCGGTTTTTGCCTCTCTGATCATGGCTaGCACGTACCGCTTCACCAGGTTCCTCATCACCTCTTGGTATTG | + |
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Preference number: 1 (lower is better) Translates to: LLRQAFFGFCLSDHG*HVPLHQVPHHLLVL Trigger: CAATACCAAGAGGTGATGAGGAACCTGGTGAAGCGGTACGTGGCAGCCATGATCAGAGAGGCAAAAACCGAAGAAGGCTTGACGGAGGAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR CCA 90 bp | GTCACAATCTTGTGGTCACATAATCTTCGTGGGCAGCTGTGTCCGTaGGGCTTAAGTCATAGTCTATGCTCGAGTCCTCCTCGTGGGCGT | + |
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Preference number: 1 (lower is better) Translates to: VTILWSHNLRGQLCP*GLSHSLCSSPPRGR Trigger: ACGCCCACGAGGAGGACTCGAGCATAGACTATGACTTAAGCCCCACGGACACAGCTGCCCACGAAGATTATGTGACCACAAGATTGTGAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR TCA 90 bp | TGGCTGCCGACCGCGGGTGGATCAGAGTGGTTAAATCAAAGAGGCTaGGATTCTTTCTCTTGTCCTTGCCATTACCTTCGCTCTGGCTCT | + |
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Preference number: 1 (lower is better) Translates to: WLPTAGGSEWLNQRG*DSFSCPCHYLRSGS Trigger: AGAGCCAGAGCGAAGGTAATGGCAAGGACAAGAGAAAGAATCTCAGCCTCTTTGATTTAACCACTCTGATCCACCCGCGGTCGGCAGCCA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR GCA 90 bp | AAGATGTTTGCAATAGCAAATAATGCCTCTGCCACCAGGGTGGGGTaGCACATGTCCCATGATTCCCGTGGGTTCAGAGCACTGTACTTT | + |
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Preference number: 1 (lower is better) Translates to: KMFAIANNASATRVG*HMSHDSRGFRALYF Trigger: AAAGTACAGTGCTCTGAACCCACGGGAATCATGGGACATGTGGCACCCCACCCTGGTGGCAGAGGCATTATTTGCTATTGCAAACATCTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR TCA 90 bp | TGTCCGTATTCCTTTCTCTATGGTCTACTAGCACACACTGTTCATTaGGACCAGGAATGCTGCGGTCACCCCGTGAAGCTAATCCTTTGG | + |
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Preference number: 1 (lower is better) Translates to: CPYSFLYGLLAHTVH*DQECCGHPVKLILW Trigger: CCAAAGGATTAGCTTCACGGGGTGACCGCAGCATTCCTGGTCTCAATGAACAGTGTGTGCTAGTAGACCATAGAGAAAGGAATACGGACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR CCA 90 bp | CTCTTGCCTACCTGTAAACCCAAAGTGTCCGTATTCCTTTCTCTATaGTCTACTAGCACACACTGTTCATTGAGACCAGGAATGCTGCGG | + |
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Preference number: 1 (lower is better) Translates to: LLPTCKPKVSVFLSL*STSTHCSLRPGMLR Trigger: CCGCAGCATTCCTGGTCTCAATGAACAGTGTGTGCTAGTAGACCATAGAGAAAGGAATACGGACACTTTGGGTTTACAGGTAGGCAAGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR CCA 90 bp | ATATGTATAGGTATGGTAAACACTCCTCCAAGGGTCACAATCTTGTaGTCACATAATCTTCGTGGGCAGCTGTGTCCGTGGGGCTTAAGT | + |
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Preference number: 1 (lower is better) Translates to: ICIGMVNTPPRVTIL*SHNLRGQLCPWGLS Trigger: ACTTAAGCCCCACGGACACAGCTGCCCACGAAGATTATGTGACCACAAGATTGTGACCCTTGGAGGAGTGTTTACCATACCTATACATAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR TCA 90 bp | TTGGATTCCAGTTCGATATTTCGCTCAAGTGCTCCTGCCGCCTGTTaGCGAGTAATTTCTTCTGAAACAGAGAAGATTTGGTTTGCGTTT | + |
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Preference number: 1 (lower is better) Translates to: LDSSSIFRSSAPAAC*RVISSETEKIWFAF Trigger: AAACGCAAACCAAATCTTCTCTGTTTCAGAAGAAATTACTCGTCAACAGGCGGCAGGAGCACTTGAGCGAAATATCGAACTGGAATCCAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR GCA 90 bp | TTAGGTTATGTCTCTCGGAGGCAATGGCTGCCGACCGCGGGTGGATCAGAGTGGGCCACCAGGGTGGGGTaGCACATGTCCCATGATTCC | + |
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Preference number: 2 (lower is better) Translates to: LGYVSRRQWLPTAGGSEWATRVG*HMSHDS Trigger: GGAATCATGGGACATGTGGCACCCCACCCTGGTGGC...CCACTCTGATCCACCCGCGGTCGGCAGCCATTGCCTCCGAGAGACATAACCTAA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR CAA 90 bp | CCTTCGCTCTGGCTCTTCTCGTCGGAGTCCGCTGAACTCGCCGCGTaGGCTGACTGTATTGTAGAGAGCTTGCTTCCTCTGAGCAATCCC | + |
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Preference number: 2 (lower is better) Translates to: PSLWLFSSESAELAA*ADCIVESLLPLSNP Trigger: GGGATTGCTCAGAGGAAGCAAGCTCTCTACAATACAGTCAGCCAACGCGGCGAGTTCAGCGGACTCCGACGAGAAGAGCCAGAGCGAAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR GCA 90 bp | TCCTTGCCATTACCTTCGCTCTGGCTCTTCTCGTCGGAGTCCGCTGAACTCGCCCGCACCGGATGCCTTTaGAGCTTAGCCCCTTTGTTT | + |
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Preference number: 2 (lower is better) Translates to: SLPLPSLWLFSSESAELARTGCL*SLAPLF Trigger: AAACAAAGGGGCTAAGCTGCAAAGGCATCCGGTGCG...GGCGAGTTCAGCGGACTCCGACGAGAAGAGCCAGAGCGAAGGTAATGGCAAGGA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR TCA 90 bp | GATCATGGCTGCCACGTACCGCTTCACCAGGTTCCTCATCACCTCTTGGTATTGGTGCCACATGTCCCATaGTTCCCGTGGGTTCAGAGC | + |
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Preference number: 2 (lower is better) Translates to: DHGCHVPLHQVPHHLLVLVPHVP*FPWVQS Trigger: GCTCTGAACCCACGGGAATCATGGGACATGTGGCAC...CAATACCAAGAGGTGATGAGGAACCTGGTGAAGCGGTACGTGGCAGCCATGATC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR CCA 90 bp | GGGACTGTAGTGTCTCGAATAACGTGGAAAACGCGTTGTTCTGTTTCTCGCACCCCTCTGCCACCAGGGTaGGGTGCCACATGTCCCATG | + |
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Preference number: 2 (lower is better) Translates to: GTVVSRITWKTRCSVSRTPLPPG*GATCPM Trigger: CATGGGACATGTGGCACCCCACCCTGGTGGCAGAGG...GGTGCGAGAAACAGAACAACGCGTTTTCCACGTTATTCGAGACACTACAGTCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR CCA 90 bp | GTGTTTCTCCTTTGGTATAATAGGGACGGTGTCTTCCACCACCACCTTCTCCGATCCTCTGCTTCTCCCTaGGCGGCTCCTGCACCACCA | + |
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Preference number: 2 (lower is better) Translates to: VFLLWYNRDGVFHHHLLRSSASP*AAPAPP Trigger: TGGTGGTGCAGGAGCCGCCCAGGGAGAAGCAGAGGA...TCGGAGAAGGTGGTGGTGGAAGACACCGTCCCTATTATACCAAAGGAGAAACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR GCA 90 bp | GTGTCTTCCACCACCACCTTCTCCGACTTGAAGGTGGAGCACACTCTCTTGCCTTCGCTCAAGTGCTCCTaGCGCCTGTTGACGAGTAAT | + |
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Preference number: 2 (lower is better) Translates to: VSSTTTFSDLKVEHTLLPSLKCS*RLLTSN Trigger: ATTACTCGTCAACAGGCGGCAGGAGCACTTGAGCGA...AGGCAAGAGAGTGTGCTCCACCTTCAAGTCGGAGAAGGTGGTGGTGGAAGACAC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTCTTCCACCACCACCTTCTCCGACTTGAAGGTGGAGCACACTCTCTTGCCTGCTCCTGCCGCCTGTTaGCGAGTAATTTCTTCTGAA | + |
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Preference number: 2 (lower is better) Translates to: VSSTTTFSDLKVEHTLLPAPAAC*RVISSE Trigger: TTCAGAAGAAATTACTCGTCAACAGGCGGCAGGAGC...AGGCAAGAGAGTGTGCTCCACCTTCAAGTCGGAGAAGGTGGTGGTGGAAGACAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR CAA 90 bp | TCATTGAGACCAGGAATGCTGCGGTCACCCCGTGAAGCTAATCCTTaGGATTCCAGTTCGATATTTCGCTCAAGTGCTCCTGCCGCCTGT | + |
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Preference number: 2 (lower is better) Translates to: SLRPGMLRSPREANP*DSSSIFRSSAPAAC Trigger: ACAGGCGGCAGGAGCACTTGAGCGAAATATCGAACTGGAATCCAAAGGATTAGCTTCACGGGGTGACCGCAGCATTCCTGGTCTCAATGA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR TCA 90 bp | TTCTTACATAAGTGTGTCCATATCCACTTGACCAGGTACCACAGGGACTTGGGGTGCAGAGGCCCCAGGTaGGAATTGGCAGTGAACAGA | + |
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Preference number: 2 (lower is better) Translates to: FLHKCVHIHLTRYHRDLGCRGPR*ELAVNR Trigger: TCTGTTCACTGCCAATTCTCACCTGGGGCCTCTGCA...CCCCAAGTCCCTGTGGTACCTGGTCAAGTGGATATGGACACACTTATGTAAGAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR GCA 90 bp | CGCGGGTGGATCAGAGTGGTTAAATCAAAGAGGCTGAGATTCTTTCTCTTGTCCCTCTCTGATCATGGCTaGCACGTACCGCTTCACCAG | + |
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Preference number: 2 (lower is better) Translates to: RGWIRVVKSKRLRFFLLSLSDHG*HVPLHQ Trigger: CTGGTGAAGCGGTACGTGGCAGCCATGATCAGAGAG...GGACAAGAGAAAGAATCTCAGCCTCTTTGATTTAACCACTCTGATCCACCCGCG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR CAA 90 bp | TTACATAAGTGTGTCCATATCCACTTGACCAGGTACCACAGGGACTaGGGGCTTGGGATGACATTGAAAGGTGTAGGCAGGGTACCTCCT | + |
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Preference number: 2 (lower is better) Translates to: LHKCVHIHLTRYHRD*GLGMTLKGVGRVPP Trigger: AGGAGGTACCCTGCCTACACCTTTCAATGTCATCCCAAGCCCCAAGTCCCTGTGGTACCTGGTCAAGTGGATATGGACACACTTATGTAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR CAA 90 bp | GGGTGGATCAGAGTGGTTAAATCAAAGAGGCTGAGATTCTTTCTCTaGTCCTTGCCATTACCTTCGCTCTGGCTCTTCTCGTCGGAGTCC | + |
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Preference number: 2 (lower is better) Translates to: GWIRVVKSKRLRFFL*SLPLPSLWLFSSES Trigger: GGACTCCGACGAGAAGAGCCAGAGCGAAGGTAATGGCAAGGACAAGAGAAAGAATCTCAGCCTCTTTGATTTAACCACTCTGATCCACCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR CAA 90 bp | TCTTCCACCACCACCTTCTCCGACTTGAAGGTGGAGCACACTCTCTaGCCTACCTGTAAACCCAAAGTGTCCGTATTCCTTTCTCTATGG | + |
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Preference number: 2 (lower is better) Translates to: SSTTTFSDLKVEHTL*PTCKPKVSVFLSLW Trigger: CCATAGAGAAAGGAATACGGACACTTTGGGTTTACAGGTAGGCAAGAGAGTGTGCTCCACCTTCAAGTCGGAGAAGGTGGTGGTGGAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR CAA 90 bp | TTTGGTATAATAGGGACGGTGTCTTCCACCACCACCTTCTCCGACTaGAAGGTGGAGCACACTCTCTTGCCTACCTGTAAACCCAAAGTG | + |
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Preference number: 2 (lower is better) Translates to: FGIIGTVSSTTTFSD*KVEHTLLPTCKPKV Trigger: CACTTTGGGTTTACAGGTAGGCAAGAGAGTGTGCTCCACCTTCAAGTCGGAGAAGGTGGTGGTGGAAGACACCGTCCCTATTATACCAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR TCA 90 bp | GTGTCTTCCACCACCACCTTCTCCGACTTGAAGGTGGAGCACACTCTCTTGCCTGGACAACCAGAGAGATaGCATTATATGTGCCAAACA | + |
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Preference number: 2 (lower is better) Translates to: VSSTTTFSDLKVEHTLLPGQPER*HYMCQT Trigger: TGTTTGGCACATATAATGTCATCTCTCTGGTTGTCC...AGGCAAGAGAGTGTGCTCCACCTTCAAGTCGGAGAAGGTGGTGGTGGAAGACAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR GCA 90 bp | GCACCACCAGGGCGGAACCATTGCTTAGGTTATGTCTCTCGGAGGCAATGGCTGCTTCAAGGAGATTGTTaGCAGATACAAGGAGTTCAT | + |
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Preference number: 2 (lower is better) Translates to: APPGRNHCLGYVSRRQWLLQGDC*QIQGVH Trigger: ATGAACTCCTTGTATCTGGCAACAATCTCCTTGAAG...CAGCCATTGCCTCCGAGAGACATAACCTAAGCAATGGTTCCGCCCTGGTGGTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR CAA 90 bp | GTGTCCGTATTCCTTTCTCTATGGTCTACTAGCACACACTGTTCATaGAGACCAGGAATGCTGCGGTCACCCCGTGAAGCTAATCCTTTG | + |
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Preference number: 2 (lower is better) Translates to: VSVFLSLWSTSTHCS*RPGMLRSPREANPL Trigger: CAAAGGATTAGCTTCACGGGGTGACCGCAGCATTCCTGGTCTCAATGAACAGTGTGTGCTAGTAGACCATAGAGAAAGGAATACGGACAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCTACCTGTAAACCCAAAGTGTCCGTATTCCTTTCTCTATGGTCTACTAGCACGGTTTTTGCCTCTCTaGTCATGGCTGCCACGTACC | + |
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Preference number: 2 (lower is better) Translates to: CLPVNPKCPYSFLYGLLARFLPL*SWLPRT Trigger: GGTACGTGGCAGCCATGATCAGAGAGGCAAAAACCG...TGCTAGTAGACCATAGAGAAAGGAATACGGACACTTTGGGTTTACAGGTAGGCA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR CCA 90 bp | GATCATGGCTGCCACGTACCGCTTCACCAGGTTCCTCATCACCTCTTGGTATTGCTGCCCAGAGCACTATaGAAAATATGTATAGGTATG | + |
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Preference number: 2 (lower is better) Translates to: DHGCHVPLHQVPHHLLVLLPRAL*KICIGM Trigger: CATACCTATACATATTTTCCATAGTGCTCTGGGCAG...CAATACCAAGAGGTGATGAGGAACCTGGTGAAGCGGTACGTGGCAGCCATGATC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR TCA 90 bp | CCCAAAGTGTCCGTATTCCTTTCTCTATGGTCTACTAGCACACACTGTTCATTGAGAGCTTGCTTCCTCTaGGCAATCCCAGAACTTCGA | + |
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Preference number: 2 (lower is better) Translates to: PKVSVFLSLWSTSTHCSLRACFL*AIPELR Trigger: TCGAAGTTCTGGGATTGCTCAGAGGAAGCAAGCTCT...CAATGAACAGTGTGTGCTAGTAGACCATAGAGAAAGGAATACGGACACTTTGGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR GCA 90 bp | TTCTTACATAAGTGTGTCCATATCCACTTGACCAGGTACCACAGGGACTTGGGGGGATTTCAAACATTTTaGCTGCCCAGAGCACTATGG | + |
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Preference number: 2 (lower is better) Translates to: FLHKCVHIHLTRYHRDLGGFQTF*LPRALW Trigger: CCATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCC...CCCCAAGTCCCTGTGGTACCTGGTCAAGTGGATATGGACACACTTATGTAAGAA 47% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR TCA 90 bp | TGCCTACCTGTAAACCCAAAGTGTCCGTATTCCTTTCTCTATGGTCTACTAGCAGCACGAGGCAGTAGATaGACAAGAACTTCAGGATGT | + |
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Preference number: 2 (lower is better) Translates to: CLPVNPKCPYSFLYGLLAARGSR*TRTSGC Trigger: ACATCCTGAAGTTCTTGTTCATCTACTGCCTCGTGC...TGCTAGTAGACCATAGAGAAAGGAATACGGACACTTTGGGTTTACAGGTAGGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR CCA 90 bp | TTCTCCGACTTGAAGGTGGAGCACACTCTCTTGCCTACCTGTAAACCCAAAGTGGTGAAGCTAATCCTTTaGATTCCAGTTCGATATTTC | + |
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Preference number: 2 (lower is better) Translates to: FSDLKVEHTLLPTCKPKVVKLIL*IPVRYF Trigger: GAAATATCGAACTGGAATCCAAAGGATTAGCTTCAC...CACTTTGGGTTTACAGGTAGGCAAGAGAGTGTGCTCCACCTTCAAGTCGGAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR TCA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAGGTGAGAATTGGCAGTaGACAGAGAGATCAGGCGGA | + |
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Preference number: 2 (lower is better) Translates to: FQTFCLPRALWKICIGMVGENWQ*TERSGG Trigger: TCCGCCTGATCTCTCTGTTCACTGCCAATTCTCACC...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR CAA 90 bp | TCAGAGCACTGTACTTTACAAACGCGACAATCTTCAAGGAGATTGTaGCCAGATACAAGGAGTTCATCACAAAGTCCATTAGATTCCACC | + |
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Preference number: 2 (lower is better) Translates to: SEHCTLQTRQSSRRL*PDTRSSSQSPLDST Trigger: GGTGGAATCTAATGGACTTTGTGATGAACTCCTTGTATCTGGCAACAATCTCCTTGAAGATTGTCGCGTTTGTAAAGTACAGTGCTCTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAAGGATTTCAAACATTTTaGCTGCCCAGAGCACTATGG | + |
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Preference number: 2 (lower is better) Translates to: SKSRLQKRRVHITSALFKGFQTF*LPRALW Trigger: CCATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCC...TTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACGGATTTCAAACATTTTaGCTGCCCAGAGCACTATGG | + |
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Preference number: 2 (lower is better) Translates to: QATKEEGSYYFCFVQTYYGFQTF*LPRALW Trigger: CCATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCC...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| 3UTR-3UTR GCA 90 bp | AGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAATTCAAACATTTTGCCTaGCCAGAGCACTATGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: SKSRLQKRRVHITSALFKFKHFA*PEHYGK Trigger: TTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAA...TTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| 3UTR-3UTR GCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACTTCAAACATTTTGCCTaGCCAGAGCACTATGGAAAA | + |
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Preference number: 2 (lower is better) Translates to: QATKEEGSYYFCFVQTYYFKHFA*PEHYGK Trigger: TTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAA...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| 3UTR GCA 72 bp | GGGCAGCTGTGTCCGTGGGGCTTAAGTCATAGTCTATaGTCGAGTCCTCCTCGTGGGCGTGTTTCTCCTTTG | + |
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Preference number: 3 (lower is better) Translates to: GQLCPWGLSHSL*SSPPRGRVSPL Trigger: CAAAGGAGAAACACGCCCACGAGGAGGACTCGAGCATAGACTATGACTTAAGCCCCACGGACACAGCTGCCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR TCA 72 bp | TCTCCTCCGTCAAGCCTTCTTCGGTTTTTGCCTCTCTaGTCATGGCTGCCACGTACCGCTTCACCAGGTTCC | + |
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Preference number: 3 (lower is better) Translates to: SPPSSLLRFLPL*SWLPRTASPGS Trigger: GGAACCTGGTGAAGCGGTACGTGGCAGCCATGATCAGAGAGGCAAAAACCGAAGAAGGCTTGACGGAGGAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR GCA 72 bp | GCAATAGCAAATAATGCCTCTGCCACCAGGGTGGGGTaGCACATGTCCCATGATTCCCGTGGGTTCAGAGCA | + |
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Preference number: 3 (lower is better) Translates to: AIANNASATRVG*HMSHDSRGFRA Trigger: TGCTCTGAACCCACGGGAATCATGGGACATGTGGCACCCCACCCTGGTGGCAGAGGCATTATTTGCTATTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTCTTCCACCACCACCTTCTCCGACTTGAAGGTGGAGCACACTCTCTTGCCTGGGCTTGGGATGACATaGAAAGGTGTAGGCAGGGTA | + |
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Preference number: 3 (lower is better) Translates to: VSSTTTFSDLKVEHTLLPGLGMT*KGVGRV Trigger: TACCCTGCCTACACCTTTCAATGTCATCCCAAGCCC...AGGCAAGAGAGTGTGCTCCACCTTCAAGTCGGAGAAGGTGGTGGTGGAAGACAC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR GCA 72 bp | CAAGCCTTCTTCGGTTTTTGCCTCTCTGATCATGGCTaGCACGTACCGCTTCACCAGGTTCCTCATCACCTC | + |
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Preference number: 3 (lower is better) Translates to: QAFFGFCLSDHG*HVPLHQVPHHL Trigger: GAGGTGATGAGGAACCTGGTGAAGCGGTACGTGGCAGCCATGATCAGAGAGGCAAAAACCGAAGAAGGCTTG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR CCA 72 bp | CGGAACCATTGCTTAGGTTATGTCTCTCGGAGGCAATaGCTGCCGACCGCGGGTGGATCAGAGTGGTTAAAT | + |
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Preference number: 3 (lower is better) Translates to: RNHCLGYVSRRQ*LPTAGGSEWLN Trigger: ATTTAACCACTCTGATCCACCCGCGGTCGGCAGCCATTGCCTCCGAGAGACATAACCTAAGCAATGGTTCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR CCA 72 bp | TTATGTCTCTCGGAGGCAATGGCTGCCGACCGCGGGTaGATCAGAGTGGTTAAATCAAAGAGGCTGAGATTC | + |
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Preference number: 3 (lower is better) Translates to: LCLSEAMAADRG*IRVVKSKRLRF Trigger: GAATCTCAGCCTCTTTGATTTAACCACTCTGATCCACCCGCGGTCGGCAGCCATTGCCTCCGAGAGACATAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| 3UTR-3UTR CAA 90 bp | GTGTCTTCCACCACCACCTTCTCCGACTTGAAGGTGGAGCACACTCTCTTGCCTCTGAGATTCTTTCTCTaGTCCTTGCCATTACCTTCG | + |
|
Preference number: 3 (lower is better) Translates to: VSSTTTFSDLKVEHTLLPLRFFL*SLPLPS Trigger: CGAAGGTAATGGCAAGGACAAGAGAAAGAATCTCAG...AGGCAAGAGAGTGTGCTCCACCTTCAAGTCGGAGAAGGTGGTGGTGGAAGACAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| 3UTR CCA 72 bp | TTGTGGTCACATAATCTTCGTGGGCAGCTGTGTCCGTaGGGCTTAAGTCATAGTCTATGCTCGAGTCCTCCT | + |
|
Preference number: 3 (lower is better) Translates to: LWSHNLRGQLCP*GLSHSLCSSPP Trigger: AGGAGGACTCGAGCATAGACTATGACTTAAGCCCCACGGACACAGCTGCCCACGAAGATTATGTGACCACAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| 3UTR CCA 72 bp | GGTATGGTAAACACTCCTCCAAGGGTCACAATCTTGTaGTCACATAATCTTCGTGGGCAGCTGTGTCCGTGG | + |
|
Preference number: 3 (lower is better) Translates to: GMVNTPPRVTIL*SHNLRGQLCPW Trigger: CCACGGACACAGCTGCCCACGAAGATTATGTGACCACAAGATTGTGACCCTTGGAGGAGTGTTTACCATACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| 3UTR TCA 72 bp | TCCTTTCTCTATGGTCTACTAGCACACACTGTTCATTaGGACCAGGAATGCTGCGGTCACCCCGTGAAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: SFLYGLLAHTVH*DQECCGHPVKL Trigger: TAGCTTCACGGGGTGACCGCAGCATTCCTGGTCTCAATGAACAGTGTGTGCTAGTAGACCATAGAGAAAGGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| 3UTR-3UTR CAA 90 bp | CCCAAAGTGTCCGTATTCCTTTCTCTATGGTCTACTAGCACACACTGTTCATTGAGGTACCACAGGGACTaGGGGCTTGGGATGACATTG | + |
|
Preference number: 3 (lower is better) Translates to: PKVSVFLSLWSTSTHCSLRYHRD*GLGMTL Trigger: CAATGTCATCCCAAGCCCCAAGTCCCTGTGGTACCT...CAATGAACAGTGTGTGCTAGTAGACCATAGAGAAAGGAATACGGACACTTTGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTTTTTGCCTCTCTGATCATGGCTGCCACGTACCGCTTCACCAGGTTCCTCATAGCTCATCCAAAGCTTaGTTCGAGCAAATTTCCATT | + |
|
Preference number: 3 (lower is better) Translates to: GFCLSDHGCHVPLHQVPHSSSKA*FEQISI Trigger: AATGGAAATTTGCTCGAACAAAGCTTTGGATGAGCT...ATGAGGAACCTGGTGAAGCGGTACGTGGCAGCCATGATCAGAGAGGCAAAAACC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| 3UTR TCA 72 bp | AGTTCGATATTTCGCTCAAGTGCTCCTGCCGCCTGTTaGCGAGTAATTTCTTCTGAAACAGAGAAGATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: SSIFRSSAPAAC*RVISSETEKIW Trigger: CCAAATCTTCTCTGTTTCAGAAGAAATTACTCGTCAACAGGCGGCAGGAGCACTTGAGCGAAATATCGAACT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| 3UTR CCA 72 bp | ACCTGTAAACCCAAAGTGTCCGTATTCCTTTCTCTATaGTCTACTAGCACACACTGTTCATTGAGACCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: TCKPKVSVFLSL*STSTHCSLRPG Trigger: TCCTGGTCTCAATGAACAGTGTGTGCTAGTAGACCATAGAGAAAGGAATACGGACACTTTGGGTTTACAGGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| 3UTR-3UTR CAA 90 bp | TGCCTACCTGTAAACCCAAAGTGTCCGTATTCCTTTCTCTATGGTCTACTAGCAGATTTGGTTTGCGTTTaGCTCAGCAGCATTTTGTTT | + |
|
Preference number: 3 (lower is better) Translates to: CLPVNPKCPYSFLYGLLADLVCV*LSSILF Trigger: AAACAAAATGCTGCTGAGCAAAACGCAAACCAAATC...TGCTAGTAGACCATAGAGAAAGGAATACGGACACTTTGGGTTTACAGGTAGGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAGTGGAGCACACTCTCTaGCCTACCTGTAAACCCAAA | + |
|
Preference number: 3 (lower is better) Translates to: FQTFCLPRALWKICIGMVVEHTL*PTCKPK Trigger: TTTGGGTTTACAGGTAGGCAAGAGAGTGTGCTCCAC...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| 3UTR-3UTR CAA 90 bp | AAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATAGGGATTTCAAACATTTaGCCTGCCCAGAGCACTATG | + |
|
Preference number: 3 (lower is better) Translates to: KAGYKRGGFILLLLCSNIGISNI*PAQSTM Trigger: CATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCCC...TATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| 3UTR-3UTR CAA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACGGGATTTCAAACATTTaGCCTGCCCAGAGCACTATG | + |
|
Preference number: 3 (lower is better) Translates to: QATKEEGSYYFCFVQTYYGISNI*PAQSTM Trigger: CATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCCC...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| 3UTR-3UTR CAA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTATTCTTTCTCTTGTCCTaGCCATTACCTTCGCTCTGG | + |
|
Preference number: 3 (lower is better) Translates to: FQTFCLPRALWKICIGMVFFLLS*PLPSLW Trigger: CCAGAGCGAAGGTAATGGCAAGGACAAGAGAAAGAA...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTTTGCCTCTCTGATCATGGCTGCCACGTACCGCTTCACCAGGTTCCTCATTTACAGCGGACCTCGTaGGGTCTGGGCACTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: GFCLSDHGCHVPLHQVPHLQRTS*GLGTET Trigger: TGTCTCAGTGCCCAGACCCCACGAGGTCCGCTGTAA...ATGAGGAACCTGGTGAAGCGGTACGTGGCAGCCATGATCAGAGAGGCAAAAACC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | GATCATGGCTGCCACGTACCGCTTCACCAGGTTCCTCATCACCTCTTGGTATTGAGGCCTTGTAGATGTTaGGCCTGGACCGTGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: DHGCHVPLHQVPHHLLVLRPCRC*AWTVNA Trigger: GGCATTCACGGTCCAGGCTCAACATCTACAAGGCCT...CAATACCAAGAGGTGATGAGGAACCTGGTGAAGCGGTACGTGGCAGCCATGATC 54% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | GCTGCCGACCGCGGGTGGATCAGAGTGGTTAAATCAAAGAGGCTGAGATTCTTTGACCTGTCGATGTGCTaGGAGGCTAGCAGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: AADRGWIRVVKSKRLRFFDLSMC*EASSSR Trigger: TCTGCTGCTGCTAGCCTCTCAGCACATCGACAGGTC...AAAGAATCTCAGCCTCTTTGATTTAACCACTCTGATCCACCCGCGGTCGGCAGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | GGTTTTTGCCTCTCTGATCATGGCTGCCACGTACCGCTTCACCAGGTTCCTCATTCTGACAATCCTCAGTaGGATGCGGTCTCTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GFCLSDHGCHVPLHQVPHSDNPQ*DAVSVG Trigger: CCCTACAGAGACCGCATCCCACTGAGGATTGTCAGA...ATGAGGAACCTGGTGAAGCGGTACGTGGCAGCCATGATCAGAGAGGCAAAAACC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| 3UTR CAA 72 bp | TGTGTCCATATCCACTTGACCAGGTACCACAGGGACTaGGGGCTTGGGATGACATTGAAAGGTGTAGGCAGG | + |
|
Preference number: 4 (lower is better) Translates to: CVHIHLTRYHRD*GLGMTLKGVGR Trigger: CCTGCCTACACCTTTCAATGTCATCCCAAGCCCCAAGTCCCTGTGGTACCTGGTCAAGTGGATATGGACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| 3UTR CAA 72 bp | ATAGGGACGGTGTCTTCCACCACCACCTTCTCCGACTaGAAGGTGGAGCACACTCTCTTGCCTACCTGTAAA | + |
|
Preference number: 4 (lower is better) Translates to: IGTVSSTTTFSD*KVEHTLLPTCK Trigger: TTTACAGGTAGGCAAGAGAGTGTGCTCCACCTTCAAGTCGGAGAAGGTGGTGGTGGAAGACACCGTCCCTAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | GTGTCTTCCACCACCACCTTCTCCGACTTGAAGGTGGAGCACACTCTCTTGCCTAGCTCCCAACTTAACTaGAAGGCAGTAAGGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: VSSTTTFSDLKVEHTLLPSSQLN*KAVRKG Trigger: CCCTTTCCTTACTGCCTTTCAGTTAAGTTGGGAGCT...AGGCAAGAGAGTGTGCTCCACCTTCAAGTCGGAGAAGGTGGTGGTGGAAGACAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR GCA 90 bp | TTCTTACATAAGTGTGTCCATATCCACTTGACCAGGTACCACAGGGACTTGGGGAGCCTGGACCGTGAATaGCTGAGGCTGTCCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: FLHKCVHIHLTRYHRDLGSLDRE*LRLSTS Trigger: GGATGTGGACAGCCTCAGGCATTCACGGTCCAGGCT...CCCCAAGTCCCTGTGGTACCTGGTCAAGTGGATATGGACACACTTATGTAAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | GCACCACCAGGGCGGAACCATTGCTTAGGTTATGTCTCTCGGAGGCAATGGCTGCTCTGTAGGGGGCGTTaGCATTTCTTTTGTAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: APPGRNHCLGYVSRRQWLLCRGR*HFFCNR Trigger: TCTATTACAAAAGAAATGTCAACGCCCCCTACAGAG...CAGCCATTGCCTCCGAGAGACATAACCTAAGCAATGGTTCCGCCCTGGTGGTGC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | ACATTCTCCTCCGTCAAGCCTTCTTCGGTTTTTGCCTCTCTGATCATGGCTGCCTGTCCACATCCGAGCTaGAGACACACTCAACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: TFSSVKPSSVFASLIMAACPHPS*RHTQHS Trigger: ACTGTGTTGAGTGTGTCTCCAGCTCGGATGTGGACA...GGCAGCCATGATCAGAGAGGCAAAAACCGAAGAAGGCTTGACGGAGGAGAATGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| 3UTR CAA 72 bp | CCAGGAATGCTGCGGTCACCCCGTGAAGCTAATCCTTaGGATTCCAGTTCGATATTTCGCTCAAGTGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: PGMLRSPREANP*DSSSIFRSSAP Trigger: AGGAGCACTTGAGCGAAATATCGAACTGGAATCCAAAGGATTAGCTTCACGGGGTGACCGCAGCATTCCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | TTAGGTTATGTCTCTCGGAGGCAATGGCTGCCGACCGCGGGTGGATCAGAGTGGCGCCTACATAGACATTaGAACTCAACAATAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: LGYVSRRQWLPTAGGSEWRLHRH*NSTIVQ Trigger: TTGAACTATTGTTGAGTTTCAATGTCTATGTAGGCG...CCACTCTGATCCACCCGCGGTCGGCAGCCATTGCCTCCGAGAGACATAACCTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | GGGATTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATCGCTTGACAGGGCAATaGGCGAGGGGCTGGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: GISNILPAQSTMENMYRYRLTGQ*ARGWPR Trigger: CCTTGGCCAGCCCCTCGCTCATTGCCCTGTCAAGCG...ATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR GCA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGGCCACCAGGGTGGGGTaGCACATGTCCCATGATTCC | + |
|
Preference number: 4 (lower is better) Translates to: STVKAKAGYKRGGFILLLATRVG*HMSHDS Trigger: GGAATCATGGGACATGTGGCACCCCACCCTGGTGGC...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| 3UTR CAA 72 bp | TTCCTTTCTCTATGGTCTACTAGCACACACTGTTCATaGAGACCAGGAATGCTGCGGTCACCCCGTGAAGCT | + |
|
Preference number: 4 (lower is better) Translates to: FLSLWSTSTHCS*RPGMLRSPREA Trigger: AGCTTCACGGGGTGACCGCAGCATTCCTGGTCTCAATGAACAGTGTGTGCTAGTAGACCATAGAGAAAGGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| 3UTR CAA 72 bp | ACCACCTTCTCCGACTTGAAGGTGGAGCACACTCTCTaGCCTACCTGTAAACCCAAAGTGTCCGTATTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: TTFSDLKVEHTL*PTCKPKVSVFL Trigger: AAGGAATACGGACACTTTGGGTTTACAGGTAGGCAAGAGAGTGTGCTCCACCTTCAAGTCGGAGAAGGTGGT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | TGCCTACCTGTAAACCCAAAGTGTCCGTATTCCTTTCTCTATGGTCTACTAGCAGTGGGGTCTGGGCACTaGGACACCTTTCTGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: CLPVNPKCPYSFLYGLLAVGSGH*DTFLNQ Trigger: TTGGTTCAGAAAGGTGTCTCAGTGCCCAGACCCCAC...TGCTAGTAGACCATAGAGAAAGGAATACGGACACTTTGGGTTTACAGGTAGGCA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTACGCTTGACAGGGCAATaGGCGAGGGGCTGGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FQTFCLPRALWKICIGMVRLTGQ*ARGWPR Trigger: CCTTGGCCAGCCCCTCGCTCATTGCCCTGTCAAGCG...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | TCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACGCTTGACAGGGCAATaGGCGAGGGGCTGGCCAAGG | + |
|
Preference number: 4 (lower is better) Translates to: SNILPAQSTMENMYRYGKRLTGQ*ARGWPR Trigger: CCTTGGCCAGCCCCTCGCTCATTGCCCTGTCAAGCG...TTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGGTGCCACATGTCCCATaGTTCCCGTGGGTTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: STVKAKAGYKRGGFILLLVPHVP*FPWVQS Trigger: GCTCTGAACCCACGGGAATCATGGGACATGTGGCAC...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR GCA 90 bp | TTCTTACATAAGTGTGTCCATATCCACTTGACCAGGTACCACAGGGACTTGGGGAGAATGGGAGGCACCTaGTTCTCTCCACTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: FLHKCVHIHLTRYHRDLGRMGGT*FSPLGF Trigger: AAAGCCAAGTGGAGAGAAGCAGGTGCCTCCCATTCT...CCCCAAGTCCCTGTGGTACCTGGTCAAGTGGATATGGACACACTTATGTAAGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | GTGTTTCTCCTTTGGTATAATAGGGACGGTGTCTTCCACCACCACCTTCTCCGACTGCTTCTCTCCACTTaGCTTTTTGTGGTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: VFLLWYNRDGVFHHHLLRLLLST*LFVVQQ Trigger: CTGCTGAACCACAAAAAGCCAAGTGGAGAGAAGCAG...TCGGAGAAGGTGGTGGTGGAAGACACCGTCCCTATTATACCAAAGGAGAAACAC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGGGACCTCGTGGGGTCTaGGCACTGAGACACCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: STVKAKAGYKRGGFILLLGPRGV*ALRHLS Trigger: AGAAAGGTGTCTCAGTGCCCAGACCCCACGAGGTCC...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | AGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACCTCTGCCACCAGGGTaGGGTGCCACATGTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLQKRRVHITSALFKPLPPG*GATCPM Trigger: CATGGGACATGTGGCACCCCACCCTGGTGGCAGAGG...TTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| 3UTR CAA 72 bp | ATAGGTATGGTAAACACTCCTCCAAGGGTCACAATCTaGTGGTCACATAATCTTCGTGGGCAGCTGTGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: IGMVNTPPRVTI*WSHNLRGQLCP Trigger: CGGACACAGCTGCCCACGAAGATTATGTGACCACAAGATTGTGACCCTTGGAGGAGTGTTTACCATACCTAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | GGTATAATAGGGACGGTGTCTTCCACCACCACCTTCTCCGACTTGAAGGTGGAGAGAGTAGTCCTATTATaGAACACGTCACCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: GIIGTVSSTTTFSDLKVERVVLL*NTSPSS Trigger: TGAAGATGGTGACGTGTTTCATAATAGGACTACTCT...CTCCACCTTCAAGTCGGAGAAGGTGGTGGTGGAAGACACCGTCCCTATTATACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTACCTCTGCCACCAGGGTaGGGTGCCACATGTCCCATG | + |
|
Preference number: 4 (lower is better) Translates to: FQTFCLPRALWKICIGMVPLPPG*GATCPM Trigger: CATGGGACATGTGGCACCCCACCCTGGTGGCAGAGG...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTATCCTCTGCTTCTCCCTaGGCGGCTCCTGCACCACCA | + |
|
Preference number: 4 (lower is better) Translates to: FQTFCLPRALWKICIGMVSSASP*AAPAPP Trigger: TGGTGGTGCAGGAGCCGCCCAGGGAGAAGCAGAGGA...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029311.11 |
||
| CDS-3UTR TCA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGGCTCAGATTCTGCTCTaGCAATCCTCAGTGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: STVKAKAGYKRGGFILLLAQILL*QSSVGC Trigger: GCATCCCACTGAGGATTGTCAGAGCAGAATCTGAGC...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACTGGACCGTGAATGCCTaGGGCTGTCCACATCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QATKEEGSYYFCFVQTYYWTVNA*GCPHPS Trigger: GCTCGGATGTGGACAGCCTCAGGCATTCACGGTCCA...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | TCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAATGGACCGTGAATGCCTaGGGCTGTCCACATCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SNILPAQSTMENMYRYGKWTVNA*GCPHPS Trigger: GCTCGGATGTGGACAGCCTCAGGCATTCACGGTCCA...TTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | GGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGTGGACCGTGAATGCCTaGGGCTGTCCACATCCGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GYKRGGFILLLLCSNILQWTVNA*GCPHPS Trigger: GCTCGGATGTGGACAGCCTCAGGCATTCACGGTCCA...CTGTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCAGGCCTTGTAGATGTTaGGCCTGGACCGTGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: ILPAQSTMENMYRYGKHSRPCRC*AWTVNA Trigger: GGCATTCACGGTCCAGGCTCAACATCTACAAGGCCT...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCCGGTTTTTGCCTCTCTaGTCATGGCTGCCACGTACC | + |
|
Preference number: 4 (lower is better) Translates to: ILPAQSTMENMYRYGKHSRFLPL*SWLPRT Trigger: GGTACGTGGCAGCCATGATCAGAGAGGCAAAAACCG...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGGCTCCTGCCGCCTGTTaGCGAGTAATTTCTTCTTCG | + |
|
Preference number: 4 (lower is better) Translates to: STVKAKAGYKRGGFILLLAPAAC*RVISSS Trigger: CGAAGAAGAAATTACTCGTCAACAGGCGGCAGGAGC...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200048.5 |
||
| CDS-3UTR GCA 90 bp | GCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACCTCTCTGATCATGGCTaGCACGTACCGCTTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: AKAGYKRGGFILLLLCSNLSDHG*HVPLHQ Trigger: CTGGTGAAGCGGTACGTGGCAGCCATGATCAGAGAG...GTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGTCTGACAATCCTCAGTaGGATGCGGTCTCTGTAGGG | + |
|
Preference number: 4 (lower is better) Translates to: STVKAKAGYKRGGFILLLSDNPQ*DAVSVG Trigger: CCCTACAGAGACCGCATCCCACTGAGGATTGTCAGA...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | TCCCGTGGGTTCAGAGCACTGTACTTTACAAACGCGACAATCTTCAAGGAGATTGTTTATCAAGGAGAATaGGAGGCACCTGCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: SRGFRALYFTNATIFKEIVYQGE*EAPASL Trigger: GAGAGAAGCAGGTGCCTCCCATTCTCCTTGATAAAC...AATCTCCTTGAAGATTGTCGCGTTTGTAAAGTACAGTGCTCTGAACCCACGGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| CDS-3UTR CCA 90 bp | GGGATTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGACCTCGTGGGGTCTaGGCACTGAGACACCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: GISNILPAQSTMENMYRYGPRGV*ALRHLS Trigger: AGAAAGGTGTCTCAGTGCCCAGACCCCACGAGGTCC...ATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCCC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCACGATGGTTGGTGGTaGACCTTGCCTGTTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: STVKAKAGYKRGGFILLLHDGWW*TLPVQV Trigger: GACTTGAACAGGCAAGGTCCACCACCAACCATCGTG...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACCTCGAGTCCTCCTCGTaGGCGTGTTTCTCCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: AKAGYKRGGFILLLLCSNLESSS*ACFSFG Trigger: ACCAAAGGAGAAACACGCCCACGAGGAGGACTCGAG...GTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCCAACCACCTCTTTTCTaGTGGCGTGAAGCAGCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: ILPAQSTMENMYRYGKHSQPPLF*WREAAH Trigger: ATGCGCTGCTTCACGCCATCAGAAAAGAGGTGGTTG...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | GGGATTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGTGGGGTCTGGGCACTaGGACACCTTTCTGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: GISNILPAQSTMENMYRYVGSGH*DTFLNQ Trigger: TTGGTTCAGAAAGGTGTCTCAGTGCCCAGACCCCAC...ATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | ACATTCTCCTCCGTCAAGCCTTCTTCGGTTTTTGCCTCTCTGATCATGGCTGCCGCAACAAACTCTTTTTaGCGGTACTTAATGGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: TFSSVKPSSVFASLIMAAATNSF*RYLMAN Trigger: ATTAGCCATTAAGTACCGTCAAAAAGAGTTTGTTGC...GGCAGCCATGATCAGAGAGGCAAAAACCGAAGAAGGCTTGACGGAGGAGAATGT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | GGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGGACCTGTCGATGTGCTaGGAGGCTAGCAGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: GYKRGGFILLLLCSNILQDLSMC*EASSSR Trigger: TCTGCTGCTGCTAGCCTCTCAGCACATCGACAGGTC...CTGTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATAGACCTGTCGATGTGCTaGGAGGCTAGCAGCAGCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAGYKRGGFILLLLCSNIDLSMC*EASSSR Trigger: TCTGCTGCTGCTAGCCTCTCAGCACATCGACAGGTC...TATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGTTGCCTGTTCAAGTCTaGCCTGTCGATGTGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: STVKAKAGYKRGGFILLLLPVQV*PVDVLR Trigger: TCTCAGCACATCGACAGGTCAGACTTGAACAGGCAA...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
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| CDS-3UTR TCA 90 bp | AAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATAGTGCCACATGTCCCATaGTTCCCGTGGGTTCAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: KAGYKRGGFILLLLCSNIVPHVP*FPWVQS Trigger: GCTCTGAACCCACGGGAATCATGGGACATGTGGCAC...TATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | GCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACGTGTCCATATCCACTTaGCCAGGTACCACAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: AKAGYKRGGFILLLLCSNVSIST*PGTTGT Trigger: AGTCCCTGTGGTACCTGGTCAAGTGGATATGGACAC...GTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR GCA 90 bp | TCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAAAGCCTGGACCGTGAATaGCTGAGGCTGTCCACATCC | + |
|
Preference number: 4 (lower is better) Translates to: SNILPAQSTMENMYRYGKSLDRE*LRLSTS Trigger: GGATGTGGACAGCCTCAGGCATTCACGGTCCAGGCT...TTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| CDS-3UTR GCA 90 bp | GCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACCGCACCGGATGCCTTTaGAGCTTAGCCCCTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: AKAGYKRGGFILLLLCSNRTGCL*SLAPLF Trigger: AAACAAAGGGGCTAAGCTGCAAAGGCATCCGGTGCG...GTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
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| CDS-3UTR CCA 90 bp | AAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATGGACCTCGTGGGGTCTaGGCACTGAGACACCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KSRLQKRRVHITSALFKHGPRGV*ALRHLS Trigger: AGAAAGGTGTCTCAGTGCCCAGACCCCACGAGGTCC...ATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | TCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAATTACAGCGGACCTCGTaGGGTCTGGGCACTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: SNILPAQSTMENMYRYGKLQRTS*GLGTET Trigger: TGTCTCAGTGCCCAGACCCCACGAGGTCCGCTGTAA...TTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| CDS-3UTR CCA 90 bp | AAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGCGGACCTCGTaGGGTCTGGGCACTGAGACA | + |
|
Preference number: 4 (lower is better) Translates to: KAGYKRGGFILLLLCSNILQRTS*GLGTET Trigger: TGTCTCAGTGCCCAGACCCCACGAGGTCCGCTGTAA...TATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| CDS-3UTR CCA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGTGTCCACATCCGAGCTaGAGACACACTCAACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: STVKAKAGYKRGGFILLLCPHPS*RHTQHS Trigger: ACTGTGTTGAGTGTGTCTCCAGCTCGGATGTGGACA...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| CDS-3UTR CCA 90 bp | GCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACCTCCACGATGGTTGGTaGTGGACCTTGCCTGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: AKAGYKRGGFILLLLCSNLHDGW*WTLPVQ Trigger: TTGAACAGGCAAGGTCCACCACCAACCATCGTGGAG...GTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
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| CDS-3UTR CCA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGATTTCTTCTTCGCTCTaGCTCTTCTCGTCGGAGTCC | + |
|
Preference number: 4 (lower is better) Translates to: STVKAKAGYKRGGFILLLISSSL*LFSSES Trigger: GGACTCCGACGAGAAGAGCCAGAGCGAAGAAGAAAT...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200048.5 |
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| 3UTR CAA 72 bp | GTTTCTCGCACCGGATGCCTTTGCAGCTTAGCCCCTTaGTTTCTTCATAGTAAAAGTACAGCTGATTTAGGC | + |
|
Preference number: 4 (lower is better) Translates to: VSRTGCLCSLAP*FLHSKSTADLG Trigger: GCCTAAATCAGCTGTACTTTTACTATGAAGAAACAAAGGGGCTAAGCTGCAAAGGCATCCGGTGCGAGAAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
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| CDS-3UTR TCA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAGTGGGGTCTGGGCACTaGGACACCTTTCTGAACCAA | + |
|
Preference number: 4 (lower is better) Translates to: FQTFCLPRALWKICIGMVVGSGH*DTFLNQ Trigger: TTGGTTCAGAAAGGTGTCTCAGTGCCCAGACCCCAC...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| CDS-3UTR TCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGGCCTTGTAGATGTTaGGCCTGGACCGTGAATGCC | + |
|
Preference number: 4 (lower is better) Translates to: QATKEEGSYYFCFVQTYYRPCRC*AWTVNA Trigger: GGCATTCACGGTCCAGGCTCAACATCTACAAGGCCT...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| CDS-3UTR TCA 90 bp | AGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAAGGTGAGAATTGGCAGTaGACAGAGAGATCAGGCGGA | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLQKRRVHITSALFKGENWQ*TERSGG Trigger: TCCGCCTGATCTCTCTGTTCACTGCCAATTCTCACC...TTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
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| CDS-3UTR TCA 90 bp | AAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATGCAGAGGCCCCAGGTaGGAATTGGCAGTGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAGYKRGGFILLLLCSNICRGPR*ELAVNR Trigger: TCTGTTCACTGCCAATTCTCACCTGGGGCCTCTGCA...TATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACTGCAGAGGCCCCAGGTaGGAATTGGCAGTGAACAGA | + |
|
Preference number: 4 (lower is better) Translates to: QATKEEGSYYFCFVQTYYCRGPR*ELAVNR Trigger: TCTGTTCACTGCCAATTCTCACCTGGGGCCTCTGCA...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR GCA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCAGAATGGGAGGCACCTaGTTCTCTCCACTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: ILPAQSTMENMYRYGKHSRMGGT*FSPLGF Trigger: AAAGCCAAGTGGAGAGAAGCAGGTGCCTCCCATTCT...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACCTCTCTGATCATGGCTaGCACGTACCGCTTCACCAG | + |
|
Preference number: 4 (lower is better) Translates to: QATKEEGSYYFCFVQTYYLSDHG*HVPLHQ Trigger: CTGGTGAAGCGGTACGTGGCAGCCATGATCAGAGAG...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR GCA 90 bp | GGGATTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATTCGCTCAAGTGCTCCTaGCGCCTGTTGACGAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GISNILPAQSTMENMYRYSLKCS*RLLTSN Trigger: ATTACTCGTCAACAGGCGGCAGGAGCACTTGAGCGA...ATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTGCTTCTCTCCACTTaGCTTTTTGTGGTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: STVKAKAGYKRGGFILLLLLLST*LFVVQQ Trigger: CTGCTGAACCACAAAAAGCCAAGTGGAGAGAAGCAG...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | TGCCTACCTGTAAACCCAAAGTGTCCGTATTCCTTTCTCTATGGTCTACTAGCAGATCTAGGAGGTCCTTaGCAAATTGTTTGCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: CLPVNPKCPYSFLYGLLADLGGP*QIVCTV Trigger: GACAGTGCAAACAATTTGCCAAGGACCTCCTAGATC...TGCTAGTAGACCATAGAGAAAGGAATACGGACACTTTGGGTTTACAGGTAGGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | CAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACCACGATGGTTGGTGGTaGACCTTGCCTGTTCAAGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTFCLPRALWKICIGMVNHDGWW*TLPVQV Trigger: GACTTGAACAGGCAAGGTCCACCACCAACCATCGTG...GTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | AGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACTCCACGATGGTTGGTaGTGGACCTTGCCTGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLQKRRVHITSALFKLHDGW*WTLPVQ Trigger: TTGAACAGGCAAGGTCCACCACCAACCATCGTGGAG...TTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATACCACTCCACGATGGTTaGTGGTGGACCTTGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: KAGYKRGGFILLLLCSNIPLHDG*WWTLPV Trigger: AACAGGCAAGGTCCACCACCAACCATCGTGGAGTGG...TATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTACCACTCCACGATGGTTaGTGGTGGACCTTGCCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: FQTFCLPRALWKICIGMVPLHDG*WWTLPV Trigger: AACAGGCAAGGTCCACCACCAACCATCGTGGAGTGG...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTATCATCCACTCCACGATaGTTGGTGGTGGACCTTGCC | + |
|
Preference number: 4 (lower is better) Translates to: FQTFCLPRALWKICIGMVSSTPR*LVVDLA Trigger: GGCAAGGTCCACCACCAACCATCGTGGAGTGGATGA...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | AAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATCTCGAGTCCTCCTCGTaGGCGTGTTTCTCCTTTGGT | + |
|
Preference number: 4 (lower is better) Translates to: KSRLQKRRVHITSALFKHLESSS*ACFSFG Trigger: ACCAAAGGAGAAACACGCCCACGAGGAGGACTCGAG...ATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACGCTCAGATTCTGCTCTaGCAATCCTCAGTGGGATGC | + |
|
Preference number: 4 (lower is better) Translates to: QATKEEGSYYFCFVQTYYAQILL*QSSVGC Trigger: GCATCCCACTGAGGATTGTCAGAGCAGAATCTGAGC...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | GGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGCAACCACCTCTTTTCTaGTGGCGTGAAGCAGCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: GYKRGGFILLLLCSNILQQPPLF*WREAAH Trigger: ATGCGCTGCTTCACGCCATCAGAAAAGAGGTGGTTG...CTGTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATACAACCACCTCTTTTCTaGTGGCGTGAAGCAGCGCAT | + |
|
Preference number: 4 (lower is better) Translates to: KAGYKRGGFILLLLCSNIQPPLF*WREAAH Trigger: ATGCGCTGCTTCACGCCATCAGAAAAGAGGTGGTTG...TATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACGTGTCCATATCCACTTaGCCAGGTACCACAGGGACT | + |
|
Preference number: 4 (lower is better) Translates to: QATKEEGSYYFCFVQTYYVSIST*PGTTGT Trigger: AGTCCCTGTGGTACCTGGTCAAGTGGATATGGACAC...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | GGGATTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGCTCCTGCCGCCTGTTaGCGAGTAATTTCTTCTGAA | + |
|
Preference number: 4 (lower is better) Translates to: GISNILPAQSTMENMYRYAPAAC*RVISSE Trigger: TTCAGAAGAAATTACTCGTCAACAGGCGGCAGGAGC...ATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029311.11 |
||
| CDS-3UTR GCA 90 bp | AGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAAAGAATGGGAGGCACCTaGTTCTCTCCACTTGGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLQKRRVHITSALFKRMGGT*FSPLGF Trigger: AAAGCCAAGTGGAGAGAAGCAGGTGCCTCCCATTCT...TTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACGTTGGTGGTGGACCTTaGCTGTTCAAGTCTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: QATKEEGSYYFCFVQTYYVGGGP*LFKSDL Trigger: CAGGTCAGACTTGAACAGGCAAGGTCCACCACCAAC...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR GCA 90 bp | AAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATGTTGGTGGTGGACCTTaGCTGTTCAAGTCTGACCTG | + |
|
Preference number: 4 (lower is better) Translates to: KSRLQKRRVHITSALFKHVGGGP*LFKSDL Trigger: CAGGTCAGACTTGAACAGGCAAGGTCCACCACCAAC...ATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR GCA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTACGCACCGGATGCCTTTaGAGCTTAGCCCCTTTGTTT | + |
|
Preference number: 4 (lower is better) Translates to: FQTFCLPRALWKICIGMVRTGCL*SLAPLF Trigger: AAACAAAGGGGCTAAGCTGCAAAGGCATCCGGTGCG...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR GCA 90 bp | GGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGTCGCTCAAGTGCTCCTaGCGCCTGTTGACGAGTAAT | + |
|
Preference number: 4 (lower is better) Translates to: GYKRGGFILLLLCSNILQSLKCS*RLLTSN Trigger: ATTACTCGTCAACAGGCGGCAGGAGCACTTGAGCGA...CTGTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR GCA 90 bp | AAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATGATATTTCGCTCAAGTaGTCCTGCCGCCTGTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: KSRLQKRRVHITSALFKHDISLK*SCRLLT Trigger: CGTCAACAGGCGGCAGGAGCACTTGAGCGAAATATC...ATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR GCA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAGATATTTCGCTCAAGTaGTCCTGCCGCCTGTTGACG | + |
|
Preference number: 4 (lower is better) Translates to: FQTFCLPRALWKICIGMVDISLK*SCRLLT Trigger: CGTCAACAGGCGGCAGGAGCACTTGAGCGAAATATC...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR GCA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCTGGAGCACACTCTCTTaGCTACCTGTAAACCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ILPAQSTMENMYRYGKHSWSTLS*LPVNPK Trigger: CTTTGGGTTTACAGGTAGGCAAGAGAGTGTGCTCCA...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCCTGCTTCTCTCCACTTaGCTTTTTGTGGTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILPAQSTMENMYRYGKHSLLLST*LFVVQQ Trigger: CTGCTGAACCACAAAAAGCCAAGTGGAGAGAAGCAG...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCGATGAACAGTCCAAGTaGGCTTTTGGGAGCTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: ILPAQSTMENMYRYGKHSDEQSK*AFGSYQ Trigger: CTGATAGCTCCCAAAAGCCCACTTGGACTGTTCATC...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | GGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGGGGCAGCTGTGTCCGTaGGGCTTAAGTCATAGTCTA | + |
|
Preference number: 4 (lower is better) Translates to: GYKRGGFILLLLCSNILQGQLCP*GLSHSL Trigger: TAGACTATGACTTAAGCCCCACGGACACAGCTGCCC...CTGTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | CAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACAGCTCCCAACTTAACTaGAAGGCAGTAAGGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QTFCLPRALWKICIGMVNSSQLN*KAVRKG Trigger: CCCTTTCCTTACTGCCTTTCAGTTAAGTTGGGAGCT...GTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTGCCTGTTCAAGTCTaGCCTGTCGATGTGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAGYKRGGFILLLLCSNILPVQV*PVDVLR Trigger: TCTCAGCACATCGACAGGTCAGACTTGAACAGGCAA...TATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | CAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACGCACGAGGCAGTAGATaGACAAGAACTTCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: QTFCLPRALWKICIGMVNARGSR*TRTSGC Trigger: ACATCCTGAAGTTCTTGTTCATCTACTGCCTCGTGC...GTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | TCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAAAGAGCTTGCTTCCTCTaGGCAATCCCAGAACTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: SNILPAQSTMENMYRYGKRACFL*AIPELR Trigger: TCGAAGTTCTGGGATTGCTCAGAGGAAGCAAGCTCT...TTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAGAGCTTGCTTCCTCTaGGCAATCCCAGAACTTCGA | + |
|
Preference number: 4 (lower is better) Translates to: FQTFCLPRALWKICIGMVRACFL*AIPELR Trigger: TCGAAGTTCTGGGATTGCTCAGAGGAAGCAAGCTCT...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | AAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATGTCCACATCCGAGCTaGAGACACACTCAACACAGT | + |
|
Preference number: 4 (lower is better) Translates to: KAGYKRGGFILLLLCSNICPHPS*RHTQHS Trigger: ACTGTGTTGAGTGTGTCTCCAGCTCGGATGTGGACA...TATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | CAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACGGCGTGTTTCTCCTTTaGTATAATAGGGACGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QTFCLPRALWKICIGMVNGVFLL*YNRDGV Trigger: GACACCGTCCCTATTATACCAAAGGAGAAACACGCC...GTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | GGGATTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGCGTGTTTCTCCTTTaGTATAATAGGGACGGTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GISNILPAQSTMENMYRYGVFLL*YNRDGV Trigger: GACACCGTCCCTATTATACCAAAGGAGAAACACGCC...ATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCCTCTGTAGGGGGCGTTaGCATTTCTTTTGTAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: ILPAQSTMENMYRYGKHSLCRGR*HFFCNR Trigger: TCTATTACAAAAGAAATGTCAACGCCCCCTACAGAG...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| CDS-3UTR TCA 90 bp | GGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGAGCTCCCAACTTAACTaGAAGGCAGTAAGGAAAGGG | + |
|
Preference number: 4 (lower is better) Translates to: GYKRGGFILLLLCSNILQSSQLN*KAVRKG Trigger: CCCTTTCCTTACTGCCTTTCAGTTAAGTTGGGAGCT...CTGTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| CDS-3UTR TCA 90 bp | GGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGGCACGAGGCAGTAGATaGACAAGAACTTCAGGATGT | + |
|
Preference number: 4 (lower is better) Translates to: GYKRGGFILLLLCSNILQARGSR*TRTSGC Trigger: ACATCCTGAAGTTCTTGTTCATCTACTGCCTCGTGC...CTGTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCGGACAACCAGAGAGATaGCATTATATGTGCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: ILPAQSTMENMYRYGKHSGQPER*HYMCQT Trigger: TGTTTGGCACATATAATGTCATCTCTCTGGTTGTCC...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATAAAACCTGTTCAAGTCTaGCCTGTCGATGTGCTGAGA | + |
|
Preference number: 4 (lower is better) Translates to: KAGYKRGGFILLLLCSNIKPVQV*PVDVLR Trigger: TCTCAGCACATCGACAGGTCAGACTTGAACAGGTTT...TATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR GCA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTATGGAGCACACTCTCTTaGCTACCTGTAAACCCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: FQTFCLPRALWKICIGMVWSTLS*LPVNPK Trigger: CTTTGGGTTTACAGGTAGGCAAGAGAGTGTGCTCCA...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | GGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGGTTTATCAAGGAGAATaGGAGGCACCTGCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GYKRGGFILLLLCSNILQVYQGE*EAPASL Trigger: GAGAGAAGCAGGTGCCTCCCATTCTCCTTGATAAAC...CTGTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACGTTTATCAAGGAGAATaGGAGGCACCTGCTTCTCTC | + |
|
Preference number: 4 (lower is better) Translates to: QATKEEGSYYFCFVQTYYVYQGE*EAPASL Trigger: GAGAGAAGCAGGTGCCTCCCATTCTCCTTGATAAAC...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | GGGATTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGATCTAGGAGGTCCTTaGCAAATTGTTTGCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GISNILPAQSTMENMYRYDLGGP*QIVCTV Trigger: GACAGTGCAAACAATTTGCCAAGGACCTCCTAGATC...ATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | GGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGGATGAACAGTCCAAGTaGGCTTTTGGGAGCTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: GYKRGGFILLLLCSNILQDEQSK*AFGSYQ Trigger: CTGATAGCTCCCAAAAGCCCACTTGGACTGTTCATC...CTGTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACGATGAACAGTCCAAGTaGGCTTTTGGGAGCTATCAG | + |
|
Preference number: 4 (lower is better) Translates to: QATKEEGSYYFCFVQTYYDEQSK*AFGSYQ Trigger: CTGATAGCTCCCAAAAGCCCACTTGGACTGTTCATC...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGGCAACAAACTCTTTTTaGCGGTACTTAATGGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: STVKAKAGYKRGGFILLLATNSF*RYLMAN Trigger: ATTAGCCATTAAGTACCGTCAAAAAGAGTTTGTTGC...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | CAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACGGACAACCAGAGAGATaGCATTATATGTGCCAAACA | + |
|
Preference number: 4 (lower is better) Translates to: QTFCLPRALWKICIGMVNGQPER*HYMCQT Trigger: TGTTTGGCACATATAATGTCATCTCTCTGGTTGTCC...GTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR GCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAACTCAGTGAACTCGTaGTGGGCTTTGACATTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: QATKEEGSYYFCFVQTYYNSVNS*WALTLV Trigger: TACCAATGTCAAAGCCCAGCACGAGTTCACTGAGTT...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR GCA 90 bp | GGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGAACTCAGTGAACTCGTaGTGGGCTTTGACATTGGTA | + |
|
Preference number: 4 (lower is better) Translates to: GYKRGGFILLLLCSNILQNSVNS*WALTLV Trigger: TACCAATGTCAAAGCCCAGCACGAGTTCACTGAGTT...CTGTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR GCA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCAGAGAAGATTTGGTTTaGGTTTTGCTCAGCAGCATT | + |
|
Preference number: 4 (lower is better) Translates to: ILPAQSTMENMYRYGKHSREDLV*VLLSSI Trigger: AATGCTGCTGAGCAAAACGCAAACCAAATCTTCTCT...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029311.11 |
||
| CDS-3UTR CCA 90 bp | GGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGGATCTAGGAGGTCCTTaGCAAATTGTTTGCACTGTC | + |
|
Preference number: 4 (lower is better) Translates to: GYKRGGFILLLLCSNILQDLGGP*QIVCTV Trigger: GACAGTGCAAACAATTTGCCAAGGACCTCCTAGATC...CTGTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CCA 90 bp | AAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATTCAGTGAACTCGTGCTaGGCTTTGACATTGGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: KSRLQKRRVHITSALFKHSVNSC*ALTLVT Trigger: TGTTACCAATGTCAAAGCCCAGCACGAGTTCACTGA...ATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | GGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGTCAGTGAACTCGTGCTaGGCTTTGACATTGGTAACA | + |
|
Preference number: 4 (lower is better) Translates to: GYKRGGFILLLLCSNILQSVNSC*ALTLVT Trigger: TGTTACCAATGTCAAAGCCCAGCACGAGTTCACTGA...CTGTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACGAAACAGAGAAGATTTaGTTTGCGTTTTGCTCAGCA | + |
|
Preference number: 4 (lower is better) Translates to: AKAGYKRGGFILLLLCSNETEKI*FAFCSA Trigger: TGCTGAGCAAAACGCAAACCAAATCTTCTCTGTTTC...GTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029311.11 |
||
| CDS-3UTR CCA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCGTATTCCTTTCTCTATaGTCTACTAGCACACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: ILPAQSTMENMYRYGKHSVFLSL*STSTHC Trigger: ACAGTGTGTGCTAGTAGACCATAGAGAAAGGAATAC...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACCTCTGTAGGGGGCGTTaGCATTTCTTTTGTAATAGA | + |
|
Preference number: 4 (lower is better) Translates to: QATKEEGSYYFCFVQTYYLCRGR*HFFCNR Trigger: TCTATTACAAAAGAAATGTCAACGCCCCCTACAGAG...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | CAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACAGAGTAGTCCTATTATaGAACACGTCACCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QTFCLPRALWKICIGMVNRVVLL*NTSPSS Trigger: TGAAGATGGTGACGTGTTTCATAATAGGACTACTCT...GTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | GCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACTTAAATCAAAGAGGCTaGGATTCTTTCTCTTGTCCT | + |
|
Preference number: 4 (lower is better) Translates to: AKAGYKRGGFILLLLCSNLNQRG*DSFSCP Trigger: AGGACAAGAGAAAGAATCTCAGCCTCTTTGATTTAA...GTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029311.11 |
||
| CDS-3UTR GCA 90 bp | AGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACTTCAAGGAGATTGTTaGCAGATACAAGGAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SKSRLQKRRVHITSALFKLQGDC*QIQGVH Trigger: ATGAACTCCTTGTATCTGGCAACAATCTCCTTGAAG...TTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCGTGAAGCTAATCCTTTaGATTCCAGTTCGATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: ILPAQSTMENMYRYGKHSVKLIL*IPVRYF Trigger: GAAATATCGAACTGGAATCCAAAGGATTAGCTTCAC...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | GCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACGTGAAGCTAATCCTTTaGATTCCAGTTCGATATTTC | + |
|
Preference number: 4 (lower is better) Translates to: AKAGYKRGGFILLLLCSNVKLIL*IPVRYF Trigger: GAAATATCGAACTGGAATCCAAAGGATTAGCTTCAC...GTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| 3UTR CAA 72 bp | TGTACTTTACAAACGCGACAATCTTCAAGGAGATTGTaGCCAGATACAAGGAGTTCATCACAAAGTCCATTA | + |
|
Preference number: 4 (lower is better) Translates to: CTLQTRQSSRRL*PDTRSSSQSPL Trigger: TAATGGACTTTGTGATGAACTCCTTGTATCTGGCAACAATCTCCTTGAAGATTGTCGCGTTTGTAAAGTACA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | GGGATTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATCGCCTACATAGACATTaGAACTCAACAATAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GISNILPAQSTMENMYRYRLHRH*NSTIVQ Trigger: TTGAACTATTGTTGAGTTTCAATGTCTATGTAGGCG...ATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGAGTAGTCCTATTATaGAACACGTCACCATCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QATKEEGSYYFCFVQTYYRVVLL*NTSPSS Trigger: TGAAGATGGTGACGTGTTTCATAATAGGACTACTCT...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | AAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATACCTCTTGGTATTGGTaGTGTCTTCTCAAGTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: KSRLQKRRVHITSALFKHTSWYW*CLLKLS Trigger: TGATAACTTGAGAAGACATCACCAATACCAAGAGGT...ATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | AAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATAACCTCTTGGTATTGGTaGTGTCTTCTCAAGTTATCA | + |
|
Preference number: 4 (lower is better) Translates to: KAGYKRGGFILLLLCSNITSWYW*CLLKLS Trigger: TGATAACTTGAGAAGACATCACCAATACCAAGAGGT...TATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR GCA 90 bp | TCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACTTCAAGGAGATTGTTaGCAGATACAAGGAGTTCAT | + |
|
Preference number: 4 (lower is better) Translates to: SNILPAQSTMENMYRYGKLQGDC*QIQGVH Trigger: ATGAACTCCTTGTATCTGGCAACAATCTCCTTGAAG...TTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CCA 90 bp | GGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGGTATTCCTTTCTCTATaGTCTACTAGCACACACTGT | + |
|
Preference number: 4 (lower is better) Translates to: GYKRGGFILLLLCSNILQVFLSL*STSTHC Trigger: ACAGTGTGTGCTAGTAGACCATAGAGAAAGGAATAC...CTGTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR TCA 90 bp | TCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACGCCTACATAGACATTaGAACTCAACAATAGTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SNILPAQSTMENMYRYGKRLHRH*NSTIVQ Trigger: TTGAACTATTGTTGAGTTTCAATGTCTATGTAGGCG...TTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR TCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACGCAACAAACTCTTTTTaGCGGTACTTAATGGCTAAT | + |
|
Preference number: 4 (lower is better) Translates to: QATKEEGSYYFCFVQTYYATNSF*RYLMAN Trigger: ATTAGCCATTAAGTACCGTCAAAAAGAGTTTGTTGC...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR GCA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACATTTGGTTTGCGTTTTaGTCAGCAGCATTTTGTTTT | + |
|
Preference number: 4 (lower is better) Translates to: QATKEEGSYYFCFVQTYYIWFAF*SAAFCF Trigger: AAAACAAAATGCTGCTGAGCAAAACGCAAACCAAAT...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029311.11 |
||
| CDS TCA 90 bp | GAGCGAGGGGCTGGCCAAGGCCTTGTAGATGTTGAGCCTGGACCGTaGATGCCTGAGGCTGTCCACATCCGAGCTGGAGACACACTCAAC | + |
|
Preference number: 5 (lower is better) Translates to: ERGAGQGLVDVEPGP*MPEAVHIRAGDTLN Trigger: GTTGAGTGTGTCTCCAGCTCGGATGTGGACAGCCTCAGGCATTCACGGTCCAGGCTCAACATCTACAAGGCCTTGGCCAGCCCCTCGCTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS CCA 90 bp | GAAACACGTCACCATCTTCACCGCCCAGTGTCTTCTCCTCCAGCCTaGGAACTCATCGTACCAGCGGGAAGCGAGCAGCTGCTGGCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ETRHHLHRPVSSPPA*ELIVPAGSEQLLAV Trigger: AACTGCCAGCAGCTGCTCGCTTCCCGCTGGTACGATGAGTTCCCAGGCTGGAGGAGAAGACACTGGGCGGTGAAGATGGTGACGTGTTTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS TCA 90 bp | CTATCAGGTAGCACACGGAGAAGACGGGGAAGAGTAGTCCTATTATaGAACACGTCACCATCTTCACCGCCCAGTGTCTTCTCCTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: LSGSTRRRRGRVVLL*NTSPSSPPSVFSSS Trigger: GCTGGAGGAGAAGACACTGGGCGGTGAAGATGGTGACGTGTTTCATAATAGGACTACTCTTCCCCGTCTTCTCCGTGTGCTACCTGATAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CAA 90 bp | TTGGTGATGTCTTCTCAAGTTATCAGCAGCACGCCGCCCAATTGTCCCGAAGCTTCTCCACTTGGCTTTTaGTGGTTCAGCAGTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LVMSSQVISSTPPNCPEASPLGF*WFSSSS Trigger: GGAGCTACTGCTGAACCACAAAAAGCCAAGTGGAGA...AGCTTCGGGACAATTGGGCGGCGTGCTGCTGATAACTTGAGAAGACATCACCAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR CAA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCTCCACTCCACGATGGTaGGTGGTGGACCTTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: ILPAQSTMENMYRYGKHSSTPRW*VVDLAC Trigger: ACAGGCAAGGTCCACCACCAACCATCGTGGAGTGGA...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CAA 90 bp | CAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACTCCACTCCACGATGGTaGGTGGTGGACCTTGCCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QTFCLPRALWKICIGMVNSTPRW*VVDLAC Trigger: ACAGGCAAGGTCCACCACCAACCATCGTGGAGTGGA...GTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CAA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGAACGTGGAAAACGCGTaGTTCTGTTTCTCGCACCGG | + |
|
Preference number: 5 (lower is better) Translates to: STVKAKAGYKRGGFILLLNVENA*FCFSHR Trigger: CCGGTGCGAGAAACAGAACAACGCGTTTTCCACGTT...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS TCA 90 bp | GACACACTCAACACAGTTACAGCGGACCTCGTGGGGTCTGGGCACTaGGACACCTTTCTGAACCAAAAGTTTGATTATCTCGTAATTATT | + |
|
Preference number: 5 (lower is better) Translates to: DTLNTVTADLVGSGH*DTFLNQKFDYLVII Trigger: AATAATTACGAGATAATCAAACTTTTGGTTCAGAAAGGTGTCTCAGTGCCCAGACCCCACGAGGTCCGCTGTAACTGTGTTGAGTGTGTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CAA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGTCTCCACTTGGCTTTTaGTGGTTCAGCAGTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: STVKAKAGYKRGGFILLLSPLGF*WFSSSS Trigger: GGAGCTACTGCTGAACCACAAAAAGCCAAGTGGAGA...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CAA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCGGGCTTGGGATGACATaGAAAGGTGTAGGCAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: ILPAQSTMENMYRYGKHSGLGMT*KGVGRV Trigger: TACCCTGCCTACACCTTTCAATGTCATCCCAAGCCC...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CAA 90 bp | GGGATTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATACCACCTTCTCCGACTaGAAGGTGGAGCACACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: GISNILPAQSTMENMYRYTTFSD*KVEHTL Trigger: GAGAGTGTGCTCCACCTTCAAGTCGGAGAAGGTGGT...ATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CAA 90 bp | GGGATTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGGCTTGGGATGACATaGAAAGGTGTAGGCAGGGTA | + |
|
Preference number: 5 (lower is better) Translates to: GISNILPAQSTMENMYRYGLGMT*KGVGRV Trigger: TACCCTGCCTACACCTTTCAATGTCATCCCAAGCCC...ATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCCC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CAA 90 bp | AAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATAAGGTACCACAGGGACTaGGGGCTTGGGATGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: KAGYKRGGFILLLLCSNIRYHRD*GLGMTL Trigger: CAATGTCATCCCAAGCCCCAAGTCCCTGTGGTACCT...TATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CAA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGGTACCACAGGGACTaGGGGCTTGGGATGACATTG | + |
|
Preference number: 5 (lower is better) Translates to: QATKEEGSYYFCFVQTYYRYHRD*GLGMTL Trigger: CAATGTCATCCCAAGCCCCAAGTCCCTGTGGTACCT...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CAA 90 bp | AAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATACCACCTTCTCCGACTaGAAGGTGGAGCACACTCTC | + |
|
Preference number: 5 (lower is better) Translates to: KSRLQKRRVHITSALFKHTTFSD*KVEHTL Trigger: GAGAGTGTGCTCCACCTTCAAGTCGGAGAAGGTGGT...ATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CAA 90 bp | GGGATTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATTCTCCACTTGGCTTTTaGTGGTTCAGCAGTAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: GISNILPAQSTMENMYRYSPLGF*WFSSSS Trigger: GGAGCTACTGCTGAACCACAAAAAGCCAAGTGGAGA...ATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAATCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CAA 90 bp | GAACTCGTGCTGGGCTTTGACATTGGTAACATAGAGATTGATGAGTCCAAATATTCCTTGGCAAATTGTTaGCACTGTCTAGACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: ELVLGFDIGNIEIDESKYSLANC*HCLDSS Trigger: GGAGCTGTCTAGACAGTGCAAACAATTTGCCAAGGA...ATATTTGGACTCATCAATCTCTATGTTACCAATGTCAAAGCCCAGCACGAGTTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200341.2 |
||
| CDS-3UTR CAA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACGTGGAAAACGCGTaGTTCTGTTTCTCGCACCGG | + |
|
Preference number: 5 (lower is better) Translates to: FQTFCLPRALWKICIGMVNVENA*FCFSHR Trigger: CCGGTGCGAGAAACAGAACAACGCGTTTTCCACGTT...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CAA 90 bp | CAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACGAGGTCCTTGGCAAATaGTTTGCACTGTCTAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: QTFCLPRALWKICIGMVNEVLGK*FALSRQ Trigger: CTGTCTAGACAGTGCAAACAATTTGCCAAGGACCTC...GTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CAA 90 bp | AGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAAGAGGTCCTTGGCAAATaGTTTGCACTGTCTAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: SKSRLQKRRVHITSALFKEVLGK*FALSRQ Trigger: CTGTCTAGACAGTGCAAACAATTTGCCAAGGACCTC...TTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CAA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACGTGGAGCACACTCTCTaGCCTACCTGTAAACCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: QATKEEGSYYFCFVQTYYVEHTL*PTCKPK Trigger: TTTGGGTTTACAGGTAGGCAAGAGAGTGTGCTCCAC...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CAA 90 bp | GGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGGTGGAGCACACTCTCTaGCCTACCTGTAAACCCAAA | + |
|
Preference number: 5 (lower is better) Translates to: GYKRGGFILLLLCSNILQVEHTL*PTCKPK Trigger: TTTGGGTTTACAGGTAGGCAAGAGAGTGTGCTCCAC...CTGTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CAA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTATCCTTGGCAAATTGTTaGCACTGTCTAGACAGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: FQTFCLPRALWKICIGMVSLANC*HCLDSS Trigger: GGAGCTGTCTAGACAGTGCAAACAATTTGCCAAGGA...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CAA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAGAGGTCCTTGGCAAATaGTTTGCACTGTCTAGACAG | + |
|
Preference number: 5 (lower is better) Translates to: FQTFCLPRALWKICIGMVEVLGK*FALSRQ Trigger: CTGTCTAGACAGTGCAAACAATTTGCCAAGGACCTC...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
||
| CDS-3UTR CAA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGAGCTCATCCAAAGCTTaGTTCGAGCAAATTTCCATT | + |
|
Preference number: 5 (lower is better) Translates to: STVKAKAGYKRGGFILLLSSSKA*FEQISI Trigger: AATGGAAATTTGCTCGAACAAAGCTTTGGATGAGCT...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
||
| CDS-3UTR CAA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCCATCACCTCTTGGTATaGGTGATGTCTTCTCAAGTT | + |
|
Preference number: 5 (lower is better) Translates to: ILPAQSTMENMYRYGKHSHHLLV*VMSSQV Trigger: AACTTGAGAAGACATCACCAATACCAAGAGGTGATG...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
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| CDS-3UTR CAA 90 bp | TCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAATTCTTTCTCTTGTCCTaGCCATTACCTTCGCTCTGG | + |
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Preference number: 5 (lower is better) Translates to: SNILPAQSTMENMYRYGKFFLLS*PLPSLW Trigger: CCAGAGCGAAGGTAATGGCAAGGACAAGAGAAAGAA...TTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029311.11 |
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| CDS-3UTR CAA 90 bp | CAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACCTGAGATTCTTTCTCTaGTCCTTGCCATTACCTTCG | + |
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Preference number: 5 (lower is better) Translates to: QTFCLPRALWKICIGMVNLRFFL*SLPLPS Trigger: CGAAGGTAATGGCAAGGACAAGAGAAAGAATCTCAG...GTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029311.11 |
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| CDS-3UTR CAA 90 bp | TCAACGGTGAAAGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCAGCAGCATTTTGTTTaGACCGTCTATGAAATAACC | + |
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Preference number: 5 (lower is better) Translates to: STVKAKAGYKRGGFILLLQQHFV*TVYEIT Trigger: GGTTATTTCATAGACGGTCAAAACAAAATGCTGCTG...CAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCTTTCACCGTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029311.11 |
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| CDS-3UTR CAA 90 bp | AGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACAGAGAAGATTTGGTTaGCGTTTTGCTCAGCAGCAT | + |
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Preference number: 5 (lower is better) Translates to: SKSRLQKRRVHITSALFKQRRFG*RFAQQH Trigger: ATGCTGCTGAGCAAAACGCAAACCAAATCTTCTCTG...TTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029311.11 |
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| CDS-3UTR CAA 90 bp | GCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACTGGCTAATTTTAGCCTaGCAAGATCATTTCCACTCT | + |
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Preference number: 5 (lower is better) Translates to: AKAGYKRGGFILLLLCSNWLILA*QDHFHS Trigger: AGAGTGGAAATGATCTTGCAAGGCTAAAATTAGCCA...GTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| CDS-3UTR CAA 90 bp | ATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACACTCCTGGCTAATTTTAGCCTaGCAAGATCATTTCCACTCT | + |
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Preference number: 5 (lower is better) Translates to: ILPAQSTMENMYRYGKHSWLILA*QDHFHS Trigger: AGAGTGGAAATGATCTTGCAAGGCTAAAATTAGCCA...GGAGTGTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| CDS-3UTR CAA 90 bp | CAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAACTCTTCAAGGAGATTGTaGCCAGATACAAGGAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: QTFCLPRALWKICIGMVNSSRRL*PDTRSS Trigger: TGAACTCCTTGTATCTGGCAACAATCTCCTTGAAGA...GTTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
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| CDS-3UTR CAA 90 bp | AAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATAGTTCCTCATCACCTCTaGGTATTGGTGATGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: KAGYKRGGFILLLLCSNIVPHHL*VLVMSS Trigger: AGAAGACATCACCAATACCAAGAGGTGATGAGGAAC...TATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
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| CDS-3UTR CAA 90 bp | GGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGGTTCCTCATCACCTCTaGGTATTGGTGATGTCTTCT | + |
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Preference number: 5 (lower is better) Translates to: GYKRGGFILLLLCSNILQVPHHL*VLVMSS Trigger: AGAAGACATCACCAATACCAAGAGGTGATGAGGAAC...CTGTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
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| CDS-3UTR CAA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACTCTTCAAGGAGATTGTaGCCAGATACAAGGAGTTCA | + |
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Preference number: 5 (lower is better) Translates to: QATKEEGSYYFCFVQTYYSSRRL*PDTRSS Trigger: TGAACTCCTTGTATCTGGCAACAATCTCCTTGAAGA...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
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| CDS-3UTR CAA 90 bp | TTTCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTACATCACCTCTTGGTATaGGTGATGTCTTCTCAAGTT | + |
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Preference number: 5 (lower is better) Translates to: FQTFCLPRALWKICIGMVHHLLV*VMSSQV Trigger: AACTTGAGAAGACATCACCAATACCAAGAGGTGATG...TACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
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| CDS-3UTR CAA 90 bp | AGCAAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACGTGAAGCTAATCCTTaGGATTCCAGTTCGATATTT | + |
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Preference number: 5 (lower is better) Translates to: SKSRLQKRRVHITSALFKREANP*DSSSIF Trigger: AAATATCGAACTGGAATCCAAAGGATTAGCTTCACG...TTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTTGCT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
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| CDS-3UTR CAA 90 bp | AAAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATTGGCTAATTTTAGCCTaGCAAGATCATTTCCACTCT | + |
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Preference number: 5 (lower is better) Translates to: KSRLQKRRVHITSALFKHWLILA*QDHFHS Trigger: AGAGTGGAAATGATCTTGCAAGGCTAAAATTAGCCA...ATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| CDS-3UTR CAA 90 bp | CAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATATTACAGCTCATCCAAAGCTTaGTTCGAGCAAATTTCCATT | + |
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Preference number: 5 (lower is better) Translates to: QATKEEGSYYFCFVQTYYSSSKA*FEQISI Trigger: AATGGAAATTTGCTCGAACAAAGCTTTGGATGAGCT...GTAATATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
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| CDS-3UTR CAA 90 bp | TCAAACATTTTGCCTGCCCAGAGCACTATGGAAAATATGTATAGGTATGGTAAAGATTTGGTTTGCGTTTaGCTCAGCAGCATTTTGTTT | + |
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Preference number: 5 (lower is better) Translates to: SNILPAQSTMENMYRYGKDLVCV*LSSILF Trigger: AAACAAAATGCTGCTGAGCAAAACGCAAACCAAATC...TTTACCATACCTATACATATTTTCCATAGTGCTCTGGGCAGGCAAAATGTTTGA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029311.11 |
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| CDS-3UTR CAA 90 bp | AAAGCAGGCTACAAAAGAGGAGGGTTCATATTACTTCTGCTTTGTTCAAACATACGTGAAGCTAATCCTTaGGATTCCAGTTCGATATTT | + |
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Preference number: 5 (lower is better) Translates to: KAGYKRGGFILLLLCSNIREANP*DSSSIF Trigger: AAATATCGAACTGGAATCCAAAGGATTAGCTTCACG...TATGTTTGAACAAAGCAGAAGTAATATGAACCCTCCTCTTTTGTAGCCTGCTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 |
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| CDS CAA 90 bp | TCTTCGCTCTGGCTCTTCTCGTCGGAGTCCGCTGAACTCGCCGCGTaGGCTGACTGTATTGTAGAGAGCTTGCTTCCTCTGAGCAATCCC | + |
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Preference number: 6 (lower is better) Translates to: SSLWLFSSESAELAA*ADCIVESLLPLSNP Trigger: GGGATTGCTCAGAGGAAGCAAGCTCTCTACAATACAGTCAGCCAACGCGGCGAGTTCAGCGGACTCCGACGAGAAGAGCCAGAGCGAAGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200048.5 |
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| CDS CAA 90 bp | TTATCAAGGAGAATGGGAGGCACCTGCTTCTCTCCACTTGGCTTTTaGTGGTTCAGCAGTAGCTCCACGGCTCCAACCACCTCTTTTCTG | + |
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Preference number: 6 (lower is better) Translates to: LSRRMGGTCFSPLGF*WFSSSSTAPTTSFL Trigger: CAGAAAAGAGGTGGTTGGAGCCGTGGAGCTACTGCTGAACCACAAAAAGCCAAGTGGAGAGAAGCAGGTGCCTCCCATTCTCCTTGATAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| CDS TCA 72 bp | AGCACACGGAGAAGACGGGGAAGAGTAGTCCTATTATaGAACACGTCACCATCTTCACCGCCCAGTGTCTTC | + |
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Preference number: 6 (lower is better) Translates to: STRRRRGRVVLL*NTSPSSPPSVF Trigger: GAAGACACTGGGCGGTGAAGATGGTGACGTGTTTCATAATAGGACTACTCTTCCCCGTCTTCTCCGTGTGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| CDS TCA 72 bp | AACACAGTTACAGCGGACCTCGTGGGGTCTGGGCACTaGGACACCTTTCTGAACCAAAAGTTTGATTATCTC | + |
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Preference number: 6 (lower is better) Translates to: NTVTADLVGSGH*DTFLNQKFDYL Trigger: GAGATAATCAAACTTTTGGTTCAGAAAGGTGTCTCAGTGCCCAGACCCCACGAGGTCCGCTGTAACTGTGTT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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| CDS GCA 72 bp | TTTGGATTCCAGTTCGATATTTCGCTCAAGTGCTCCTaGCGCCTGTTGACGAGTAATTTCTTCTTCGCTCTG | + |
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Preference number: 6 (lower is better) Translates to: FGFQFDISLKCS*RLLTSNFFFAL Trigger: CAGAGCGAAGAAGAAATTACTCGTCAACAGGCGGCAGGAGCACTTGAGCGAAATATCGAACTGGAATCCAAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000200048.5 |
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| CDS TCA 72 bp | TTAAGAATGATTTCCAGCTCTCTGGAACTCCGTGTCTaGTCTAGGAGGTCCTTGGCAAATTGTTTGCACTGT | + |
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Preference number: 6 (lower is better) Translates to: LRMISSSLELRV*SRRSLANCLHC Trigger: ACAGTGCAAACAATTTGCCAAGGACCTCCTAGATCAGACACGGAGTTCCAGAGAGCTGGAAATCATTCTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000029311.11 ENSMUST00000200048.5 ENSMUST00000200341.2 |
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