Pregenerated sensors for TRPC3 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000027716Ensembl transcript IDs: ENSMUST00000029271.5
Found 102 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | ACAAAAACCTGCTTCAGCGTTTGGATGAGAACGTATGCTACTCAGTaGTGGTCTCTCGTCTGCTCTTGGATGCAACTGGCTGGACGGCCA | + |
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Preference number: 1 (lower is better) Translates to: TKTCFSVWMRTYATQ*WSLVCSWMQLAGRP Trigger: TGGCCGTCCAGCCAGTTGCATCCAAGAGCAGACGAGAGACCATCACTGAGTAGCATACGTTCTCATCCAAACGCTGAAGCAGGTTTTTGT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| 3UTR CCA 90 bp | TGCTACTCAGTGATGGTCTCTCGTCTGCTCTTGGATGCAACTGGCTaGACGGCCATTTGGTTTCACATTCACCAAGCACCTACTATGTAT | + |
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Preference number: 1 (lower is better) Translates to: CYSVMVSRLLLDATG*TAIWFHIHQAPTMY Trigger: ATACATAGTAGGTGCTTGGTGAATGTGAAACCAAATGGCCGTCCAGCCAGTTGCATCCAAGAGCAGACGAGAGACCATCACTGAGTAGCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| 3UTR CAA 90 bp | GCTCTACACCATAGTTTTTCAAGTATTTCATACTTAGGAGTATTATaGCCCACGTTGTGCTATAGTCAAGGCTTGACTGCAGGTGGCTGC | + |
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Preference number: 2 (lower is better) Translates to: ALHHSFSSISYLGVL*PTLCYSQGLTAGGC Trigger: GCAGCCACCTGCAGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCCTAAGTATGAAATACTTGAAAAACTATGGTGTAGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| 3UTR CAA 90 bp | CATTTCCCTGTTAAATTCTTCACTTGCATTTCCAACATCCTAGAATaGTCAGCAGCATCTAAAAGTCTAAGAAAGATCTCCACAAGTCAT | + |
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Preference number: 2 (lower is better) Translates to: HFPVKFFTCISNILE*SAASKSLRKISTSH Trigger: ATGACTTGTGGAGATCTTTCTTAGACTTTTAGATGCTGCTGACAATTCTAGGATGTTGGAAATGCAAGTGAAGAATTTAACAGGGAAATG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| 3UTR CCA 72 bp | GTACTAAATGTGGGAGACATGAAGATGAGATCGCTGTaGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAAC | + |
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Preference number: 3 (lower is better) Translates to: VLNVGDMKMRSL*TLSPKELLEAN Trigger: GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCATGTCTCCCACATTTAGTAC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| 3UTR TCA 72 bp | TGCTTCAGCGTTTGGATGAGAACGTATGCTACTCAGTaGTGGTCTCTCGTCTGCTCTTGGATGCAACTGGCT | + |
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Preference number: 3 (lower is better) Translates to: CFSVWMRTYATQ*WSLVCSWMQLA Trigger: AGCCAGTTGCATCCAAGAGCAGACGAGAGACCATCACTGAGTAGCATACGTTCTCATCCAAACGCTGAAGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR CCA 90 bp | AAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACAGGGGGTCAGGCGCCGGCTaGCTGCAAAGCCTGGGTGGC | + |
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Preference number: 4 (lower is better) Translates to: KMRSLWTLSPKELLEANRGSGAG*LQSLGG Trigger: GCCACCCAGGCTTTGCAGCCAGCCGGCGCCTGACCC...CCTGTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR TCA 90 bp | GACATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCTCGCTCTCCTGCACGTaGCTATCCACATACTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: DMKMRSLWTLSPKELLEASLSCT*LSTYCC Trigger: GCAGCAGTATGTGGATAGTCACGTGCAGGAGAGCGA...GGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCATGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR TCA 90 bp | GACATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCCAATCCGGGAGAAGCTaGGCACCACAGCTATGGCAT | + |
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Preference number: 4 (lower is better) Translates to: DMKMRSLWTLSPKELLEAQSGRS*APQLWH Trigger: ATGCCATAGCTGTGGTGCTCAGCTTCTCCCGGATTG...GGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCATGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR GCA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACTTGCCTACAGCCAGCTaGAGTGCGTTCTGGCCCATG | + |
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Preference number: 4 (lower is better) Translates to: MKMRSLWTLSPKELLEANLPTAS*SAFWPM Trigger: CATGGGCCAGAACGCACTGCAGCTGGCTGTAGGCAA...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR GCA 90 bp | AAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACAGGTCGGTCACCTCCAGATaGTCATTGCCTACAGCCAGC | + |
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Preference number: 4 (lower is better) Translates to: KMRSLWTLSPKELLEANRSVTSR*SLPTAS Trigger: GCTGGCTGTAGGCAATGAGCATCTGGAGGTGACCGA...CCTGTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR TCA 90 bp | AAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACAGGTGTTTGGCAGCGTGGTaGTGCCTTCAAATCTGTCCG | + |
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Preference number: 4 (lower is better) Translates to: KMRSLWTLSPKELLEANRCLAAW*CLQICP Trigger: CGGACAGATTTGAAGGCATCACCACGCTGCCAAACA...CCTGTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR GCA 90 bp | AAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACAGGGTACTTATGGCAGTGTaGAGCCAGGATGATGGGCGT | + |
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Preference number: 4 (lower is better) Translates to: KMRSLWTLSPKELLEANRVLMAV*SQDDGR Trigger: ACGCCCATCATCCTGGCTGCACACTGCCATAAGTAC...CCTGTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR GCA 90 bp | GACATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCCTTCCAAGAGAGATCTaGAAGGGCCCAAAGCTCTCG | + |
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Preference number: 4 (lower is better) Translates to: DMKMRSLWTLSPKELLEALPREI*KGPKLS Trigger: CGAGAGCTTTGGGCCCTTGCAGATCTCTCTTGGAAG...GGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCATGTC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR CCA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACTCCGTCCACGTGAACTaGGTGGTCTTCACCCTGAAG | + |
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Preference number: 4 (lower is better) Translates to: MKMRSLWTLSPKELLEANSVHVN*VVFTLK Trigger: CTTCAGGGTGAAGACCACCCAGTTCACGTGGACGGA...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR TCA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACCCTTCAGATATGATCTaGGGGTCTGAGGGGAGCCAT | + |
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Preference number: 4 (lower is better) Translates to: MKMRSLWTLSPKELLEANPSDMI*GSEGSH Trigger: ATGGCTCCCCTCAGACCCTCAGATCATATCTGAAGG...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR GCA 90 bp | GGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTGCAGGTGGCTGCCTATCCACATACTGCTaGGCCTTCGTGGCCTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: GVLLPTLCYSQGLTAGGCLSTYC*AFVACR Trigger: CCTGCAGGCCACGAAGGCGCAGCAGTATGTGGATAG...GCAGCCACCTGCAGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR CCA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACACAAGTATGCTGGGCTaGCCAGTCCCTTGTAGGCAT | + |
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Preference number: 4 (lower is better) Translates to: MKMRSLWTLSPKELLEANTSMLG*PVPCRH Trigger: ATGCCTACAAGGGACTGGCCAGCCCAGCATACTTGT...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR TCA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACGGGCCACAAACTTCATaGAGGGGCTTCGAAGAATCT | + |
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Preference number: 4 (lower is better) Translates to: MKMRSLWTLSPKELLEANGPQTS*RGFEES Trigger: AGATTCTTCGAAGCCCCTTCATGAAGTTTGTGGCCC...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR TCA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACTATGATCTGAGGGTCTaGGGGGAGCCATTTGTCTCT | + |
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Preference number: 4 (lower is better) Translates to: MKMRSLWTLSPKELLEANYDLRV*GEPFVS Trigger: AGAGACAAATGGCTCCCCTCAGACCCTCAGATCATA...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 53% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR TCA 90 bp | GGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTGCAGGTGGCTGCTTTGACACGACTCAGTaGCGCTTTGTGCCCGTGTCT | + |
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Preference number: 4 (lower is better) Translates to: GVLLPTLCYSQGLTAGGCFDTTQ*RFVPVS Trigger: AGACACGGGCACAAAGCGTCACTGAGTCGTGTCAAA...GCAGCCACCTGCAGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR GCA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACGAATCTTCCCCAGCCTaGTACAAGGTGCAATCCAAT | + |
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Preference number: 4 (lower is better) Translates to: MKMRSLWTLSPKELLEANESSPA*YKVQSN Trigger: ATTGGATTGCACCTTGTAGCAGGCTGGGGAAGATTC...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR GCA 90 bp | GACATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCACTTTGAGTTACCCATaGCCAGTTCCAGATCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: DMKMRSLWTLSPKELLEATLSYP*PVPDPS Trigger: AGAAGGATCTGGAACTGGGCATGGGTAACTCAAAGT...GGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCATGTC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR TCA 90 bp | ATTTCATACTTAGGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTGCTCCTCCTCAGCTGTaGGGCTGGGCCCACGAGCAC | + |
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Preference number: 4 (lower is better) Translates to: ISYLGVLLPTLCYSQGLTAPPQL*GWAHEH Trigger: GTGCTCGTGGGCCCAGCCTCACAGCTGAGGAGGAGC...AGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCCTAAGTATGAAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR TCA 90 bp | GGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTGCAGGTGGCTGCATTGATCCTAGACCTTaGGTGGCTGAAGGCGTCAAG | + |
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Preference number: 4 (lower is better) Translates to: GVLLPTLCYSQGLTAGGCIDPRP*VAEGVK Trigger: CTTGACGCCTTCAGCCACTCAAGGTCTAGGATCAAT...GCAGCCACCTGCAGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR GCA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACCCACTACGAAGTCTTTaGATTGCATGGAGAGTTTCC | + |
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Preference number: 4 (lower is better) Translates to: MKMRSLWTLSPKELLEANPLRSL*IAWRVS Trigger: GGAAACTCTCCATGCAATGCAAAGACTTCGTAGTGG...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR GCA 90 bp | GGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTGCAGGTGGCTGCCCCAAAGCTCTCGTTTaGAGGGAGGATGTACGCAAT | + |
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Preference number: 4 (lower is better) Translates to: GVLLPTLCYSQGLTAGGCPKALV*REDVRN Trigger: ATTGCGTACATCCTCCCTGCAAACGAGAGCTTTGGG...GCAGCCACCTGCAGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR CCA 90 bp | GGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTGCAGGTGGCTGCCAATCCAATAGCCGATaGCGAGGAATGGAAGACCCA | + |
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Preference number: 4 (lower is better) Translates to: GVLLPTLCYSQGLTAGGCQSNSR*RGMEDP Trigger: TGGGTCTTCCATTCCTCGCCATCGGCTATTGGATTG...GCAGCCACCTGCAGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR CCA 90 bp | GGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTGCAGGTGGCTGCATGAAGGAGGCAGCGTaGGCCACAAACTTCATGAAG | + |
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Preference number: 4 (lower is better) Translates to: GVLLPTLCYSQGLTAGGCMKEAA*ATNFMK Trigger: CTTCATGAAGTTTGTGGCCCACGCTGCCTCCTTCAT...GCAGCCACCTGCAGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR TCA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACTCCTGTAGTCATTCTTaGACTCCTTCTCTATGTTGG | + |
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Preference number: 4 (lower is better) Translates to: MKMRSLWTLSPKELLEANSCSHS*TPSLCW Trigger: CCAACATAGAGAAGGAGTTCAAGAATGACTACAGGA...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR TCA 90 bp | AAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACAGGACCAAAACAAAGTCTTaGAACTTTCTTCAACCGTGG | + |
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Preference number: 4 (lower is better) Translates to: KMRSLWTLSPKELLEANRTKTKS*NFLQPW Trigger: CCACGGTTGAAGAAAGTTTCAAGACTTTGTTTTGGT...CCTGTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR CCA 90 bp | ATTTCATACTTAGGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTGCTGCAAAGCCTGGGTaGCCCAGGATGGCCTCCACG | + |
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Preference number: 4 (lower is better) Translates to: ISYLGVLLPTLCYSQGLTAAKPG*PRMAST Trigger: CGTGGAGGCCATCCTGGGCCACCCAGGCTTTGCAGC...AGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCCTAAGTATGAAAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR CCA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACAGGAGAGCCAAAGTTTaGAACGAGCAAACTTCCATT | + |
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Preference number: 4 (lower is better) Translates to: MKMRSLWTLSPKELLEANRRAKV*NEQTSI Trigger: AATGGAAGTTTGCTCGTTCCAAACTTTGGCTCTCCT...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR TCA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACTGGAGATATCCTGCTTaGTTTCTTTCAGTTCACCTT | + |
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Preference number: 4 (lower is better) Translates to: MKMRSLWTLSPKELLEANWRYPA*FLSVHL Trigger: AAGGTGAACTGAAAGAAATCAAGCAGGATATCTCCA...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| 3UTR CAA 72 bp | TCGTCTGCTCTTGGATGCAACTGGCTGGACGGCCATTaGGTTTCACATTCACCAAGCACCTACTATGTATCA | + |
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Preference number: 4 (lower is better) Translates to: SSALGCNWLDGH*VSHSPSTYYVS Trigger: TGATACATAGTAGGTGCTTGGTGAATGTGAAACCAAATGGCCGTCCAGCCAGTTGCATCCAAGAGCAGACGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR GCA 90 bp | ATTTCATACTTAGGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTCAGGCGAGAAGCGTGTaGCATCCTCGTCGTAAGCAT | + |
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Preference number: 4 (lower is better) Translates to: ISYLGVLLPTLCYSQGLTQARSV*HPRRKH Trigger: ATGCTTACGACGAGGATGGCACACGCTTCTCGCCTG...AGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCCTAAGTATGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR CCA 90 bp | ATTTCATACTTAGGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTACAGAAGTAGTCGTGTaGCCTCTCGATGCGTGCACC | + |
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Preference number: 4 (lower is better) Translates to: ISYLGVLLPTLCYSQGLTTEVVV*PLDACT Trigger: GGTGCACGCATCGAGAGGCCACACGACTACTTCTGT...AGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCCTAAGTATGAAAT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR CCA 90 bp | ATAAAGGTAGGGAACACTAGAGCTCTACACCATAGTTTTTCAAGTATTTCATACGCACGGGGTCCTCGCTaGACAGCGACAAGTATGCTG | + |
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Preference number: 4 (lower is better) Translates to: IKVGNTRALHHSFSSISYARGPR*TATSML Trigger: CAGCATACTTGTCGCTGTCCAGCGAGGACCCCGTGC...GTATGAAATACTTGAAAAACTATGGTGTAGAGCTCTAGTGTTCCCTACCTTTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR CCA 90 bp | GGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTGCAGGTGGCTGCTCATCCTCGATCTCTTaGTATGAGCTATTAATCATA | + |
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Preference number: 4 (lower is better) Translates to: GVLLPTLCYSQGLTAGGCSSSIS*YELLII Trigger: TATGATTAATAGCTCATACCAAGAGATCGAGGATGA...GCAGCCACCTGCAGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| 3UTR CAA 72 bp | TCAAGTATTTCATACTTAGGAGTATTATTGCCCACGTaGTGCTATAGTCAAGGCTTGACTGCAGGTGGCTGC | + |
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Preference number: 4 (lower is better) Translates to: SSISYLGVLLPT*CYSQGLTAGGC Trigger: GCAGCCACCTGCAGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCCTAAGTATGAAATACTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR TCA 90 bp | ATAAAGGTAGGGAACACTAGAGCTCTACACCATAGTTTTTCAAGTATTTCATACTTCCAGGGGCTCGGCTaGTTCCAGATCTCCATTCAG | + |
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Preference number: 4 (lower is better) Translates to: IKVGNTRALHHSFSSISYFQGLG*FQISIQ Trigger: CTGAATGGAGATCTGGAATCAGCCGAGCCCCTGGAA...GTATGAAATACTTGAAAAACTATGGTGTAGAGCTCTAGTGTTCCCTACCTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR GCA 90 bp | ATAAAGGTAGGGAACACTAGAGCTCTACACCATAGTTTTTCAAGTATTTCATACCCAGCCACAGCTCCTTaGACTCAGACCACATCATCC | + |
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Preference number: 4 (lower is better) Translates to: IKVGNTRALHHSFSSISYPATAP*TQTTSS Trigger: GGATGATGTGGTCTGAGTGCAAGGAGCTGTGGCTGG...GTATGAAATACTTGAAAAACTATGGTGTAGAGCTCTAGTGTTCCCTACCTTTAT 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR CCA 90 bp | ATTTCATACTTAGGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTACTCCTTCTCTATGTTaGCCAGCTTGGCCAGCTCAT | + |
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Preference number: 4 (lower is better) Translates to: ISYLGVLLPTLCYSQGLTTPSLC*PAWPAH Trigger: ATGAGCTGGCCAAGCTGGCCAACATAGAGAAGGAGT...AGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCCTAAGTATGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR CCA 90 bp | ATTTCATACTTAGGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTGATCTCCATTCAGAATaGCTTCCACCTCCTCCGAGT | + |
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Preference number: 4 (lower is better) Translates to: ISYLGVLLPTLCYSQGLTDLHSE*LPPPPS Trigger: ACTCGGAGGAGGTGGAAGCCATTCTGAATGGAGATC...AGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCCTAAGTATGAAAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR TCA 90 bp | ATAAAGGTAGGGAACACTAGAGCTCTACACCATAGTTTTTCAAGTATTTCATACATCTGTCCGAGGCGTTaGATACAAGCAGACCCAGAA | + |
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Preference number: 4 (lower is better) Translates to: IKVGNTRALHHSFSSISYICPRR*IQADPE Trigger: TTCTGGGTCTGCTTGTATTCAACGCCTCGGACAGAT...GTATGAAATACTTGAAAAACTATGGTGTAGAGCTCTAGTGTTCCCTACCTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR GCA 90 bp | ATAAAGGTAGGGAACACTAGAGCTCTACACCATAGTTTTTCAAGTATTTCATACAGTTCCAGATCCTTCTaGAGTCTTCTCCTCCTGCAT | + |
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Preference number: 4 (lower is better) Translates to: IKVGNTRALHHSFSSISYSSRSF*SLLLLH Trigger: ATGCAGGAGGAGAAGACTGCAGAAGGATCTGGAACT...GTATGAAATACTTGAAAAACTATGGTGTAGAGCTCTAGTGTTCCCTACCTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS-3UTR CCA 90 bp | ATAAAGGTAGGGAACACTAGAGCTCTACACCATAGTTTTTCAAGTATTTCATACGATAACAGTGATGTTTaGCAGCGTGGTGATGCCTTC | + |
|
Preference number: 4 (lower is better) Translates to: IKVGNTRALHHSFSSISYDNSDV*QRGDAF Trigger: GAAGGCATCACCACGCTGCCAAACATCACTGTTATC...GTATGAAATACTTGAAAAACTATGGTGTAGAGCTCTAGTGTTCCCTACCTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CCA 90 bp | ATTTCATACTTAGGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTGTTTATGAATCAAGATaGCTAATTCCTCCGTCGCTT | + |
|
Preference number: 4 (lower is better) Translates to: ISYLGVLLPTLCYSQGLTVYESR*LIPPSL Trigger: AAGCGACGGAGGAATTAGCCATCTTGATTCATAAAC...AGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCCTAAGTATGAAAT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR TCA 90 bp | ATTTCATACTTAGGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTGCTGTTAAAACTGTGTaGTTCAAAAACTCTCGAGTT | + |
|
Preference number: 4 (lower is better) Translates to: ISYLGVLLPTLCYSQGLTAVKTV*FKNSRV Trigger: AACTCGAGAGTTTTTGAATCACACAGTTTTAACAGC...AGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCCTAAGTATGAAAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR TCA 90 bp | ATTTCATACTTAGGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTTTCTCACTGAGTTTATaGATCAAGATGGCTAATTCC | + |
|
Preference number: 4 (lower is better) Translates to: ISYLGVLLPTLCYSQGLTFSLSL*IKMANS Trigger: GGAATTAGCCATCTTGATTCATAAACTCAGTGAGAA...AGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCCTAAGTATGAAAT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CCA 90 bp | ATAAAGGTAGGGAACACTAGAGCTCTACACCATAGTTTTTCAAGTATTTCATACCTGCTGATATCGTGTTaGCTGATTGAGAATGCTGTT | + |
|
Preference number: 4 (lower is better) Translates to: IKVGNTRALHHSFSSISYLLISC*LIENAV Trigger: AACAGCATTCTCAATCAGCCAACACGATATCAGCAG...GTATGAAATACTTGAAAAACTATGGTGTAGAGCTCTAGTGTTCCCTACCTTTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR TCA 90 bp | ATAAAGGTAGGGAACACTAGAGCTCTACACCATAGTTTTTCAAGTATTTCATACCTCGATCTCTTGGTATaGGCTATTAATCATAGCAAT | + |
|
Preference number: 4 (lower is better) Translates to: IKVGNTRALHHSFSSISYLDLLV*AINHSN Trigger: ATTGCTATGATTAATAGCTCATACCAAGAGATCGAG...GTATGAAATACTTGAAAAACTATGGTGTAGAGCTCTAGTGTTCCCTACCTTTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS GCA 90 bp | GGCCACGCACTGCCTGGCGCCGGCCCTTGTCACGCATCCCCGCAGTaGGCCACCTGGATGGGCTGCCCTCCGACGACGCGTCGGGCCCCG | + |
|
Preference number: 5 (lower is better) Translates to: GHALPGAGPCHASPQ*ATWMGCPPTTRRAP Trigger: CGGGGCCCGACGCGTCGTCGGAGGGCAGCCCATCCAGGTGGCGCACTGCGGGGATGCGTGACAAGGGCCGGCGCCAGGCAGTGCGTGGCC 77% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS GCA 90 bp | GAGGCTGGGCCCACGAGCACCGAACATGAAGGCCGGGCCACGCACTaGCTGGCGCCGGCCCTTGTCACGCATCCCCGCAGTGCGCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: EAGPTSTEHEGRATH*LAPALVTHPRSAPP Trigger: AGGTGGCGCACTGCGGGGATGCGTGACAAGGGCCGGCGCCAGGCAGTGCGTGGCCCGGCCTTCATGTTCGGTGCTCGTGGGCCCAGCCTC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS CCA 90 bp | CTGGGCCCACGAGCACCGAACATGAAGGCCGGGCCACGCACTGCCTaGCGCCGGCCCTTGTCACGCATCCCCGCAGTGCGCCACCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: LGPRAPNMKAGPRTA*RRPLSRIPAVRHLD Trigger: ATCCAGGTGGCGCACTGCGGGGATGCGTGACAAGGGCCGGCGCCAGGCAGTGCGTGGCCCGGCCTTCATGTTCGGTGCTCGTGGGCCCAG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS TCA 90 bp | CGTAAGCATAGAAGTCATCATCTCGCAGTTCTTGCTCGCAAGGGCTaGGGGTCAGGCGCCGGCTGGCTGCAAAGCCTGGGTGGCCCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: RKHRSHHLAVLARKG*GSGAGWLQSLGGPG Trigger: TCCTGGGCCACCCAGGCTTTGCAGCCAGCCGGCGCCTGACCCTCAGCCCTTGCGAGCAAGAACTGCGAGATGATGACTTCTATGCTTACG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS TCA 90 bp | ACCTCAGGTGGGAGCGTGACTTCGCTCAGATCGCTCTCCTGCACGTaGCTATCCACATACTGCTGCGCCTTCGTGGCCTGCAGGAAAGCG | + |
|
Preference number: 5 (lower is better) Translates to: TSGGSVTSLRSLSCT*LSTYCCAFVACRKA Trigger: CGCTTTCCTGCAGGCCACGAAGGCGCAGCAGTATGTGGATAGTCACGTGCAGGAGAGCGATCTGAGCGAAGTCACGCTCCCACCTGAGGT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS TCA 90 bp | AGCAGCGACAGAAGTAGTCGTGTGGCCTCTCGATGCGTGCACCCTTaGGTAGCAGCAGGTGCACCACCTCGTACTTATGGCAGTGTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: SSDRSSRVASRCVHP*VAAGAPPRTYGSVQ Trigger: CTGCACACTGCCATAAGTACGAGGTGGTGCACCTGCTGCTACTCAAGGGTGCACGCATCGAGAGGCCACACGACTACTTCTGTCGCTGCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACTCGATGCGTGCACCCTaGAGTAGCAGCAGGTGCACC | + |
|
Preference number: 5 (lower is better) Translates to: MKMRSLWTLSPKELLEANSMRAP*SSSRCT Trigger: GGTGCACCTGCTGCTACTCAAGGGTGCACGCATCGA...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS GCA 90 bp | CACAGTCCTTCCAAGAGAGATCTGCAAGGGCCCAAAGCTCTCGTTTaGAGGGAGGATGTACGCAATCCGGGAGAAGCTGAGCACCACAGC | + |
|
Preference number: 5 (lower is better) Translates to: HSPSKRDLQGPKALV*REDVRNPGEAEHHS Trigger: GCTGTGGTGCTCAGCTTCTCCCGGATTGCGTACATCCTCCCTGCAAACGAGAGCTTTGGGCCCTTGCAGATCTCTCTTGGAAGGACTGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | AAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACAGGTCTATGTTGGCCAGCTaGGCCAGCTCATTGCTGAGC | + |
|
Preference number: 5 (lower is better) Translates to: KMRSLWTLSPKELLEANRSMLAS*ASSLLS Trigger: GCTCAGCAATGAGCTGGCCAAGCTGGCCAACATAGA...CCTGTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | GACATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCTCCAGCCACAGCTCCTaGCACTCAGACCACATCATC | + |
|
Preference number: 5 (lower is better) Translates to: DMKMRSLWTLSPKELLEASSHSS*HSDHII Trigger: GATGATGTGGTCTGAGTGCAAGGAGCTGTGGCTGGA...GGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCATGTC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS GCA 90 bp | CCCAAGGCCACGACCAACACGACCAGACACTTGATAGCGATGGTCTaGTCCCGGAGGCCGGAAAGGTTCTCATACCAGATTGTCAAAAGC | + |
|
Preference number: 5 (lower is better) Translates to: PKATTNTTRHLIAMV*SRRPERFSYQIVKS Trigger: GCTTTTGACAATCTGGTATGAGAACCTTTCCGGCCTCCGGGAGCAGACCATCGCTATCAAGTGTCTGGTCGTGTTGGTCGTGGCCTTGGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACGCCCAAAGCTCTCGTTaGCAGGGAGGATGTACGCAA | + |
|
Preference number: 5 (lower is better) Translates to: MKMRSLWTLSPKELLEANAQSSR*QGGCTQ Trigger: TTGCGTACATCCTCCCTGCAAACGAGAGCTTTGGGC...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS GCA 90 bp | CTTCATGAAGGGGCTTCGAAGAATCTTCCCCAGCCTGCTACAAGGTaGAATCCAATAGCCGATGGCGAGGAATGGAAGACCCAAGGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: LHEGASKNLPQPATR*NPIADGEEWKTQGH Trigger: GTGGCCTTGGGTCTTCCATTCCTCGCCATCGGCTATTGGATTGCACCTTGTAGCAGGCTGGGGAAGATTCTTCGAAGCCCCTTCATGAAG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACAACTCCTTCTCTATGTaGGCCAGCTTGGCCAGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: MKMRSLWTLSPKELLEANNSFSM*ASLASS Trigger: TGAGCTGGCCAAGCTGGCCAACATAGAGAAGGAGTT...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACAACACGACCAGACACTaGATAGCGATGGTCTGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: MKMRSLWTLSPKELLEANNTTRH*IAMVCS Trigger: GGAGCAGACCATCGCTATCAAGTGTCTGGTCGTGTT...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | ATAAAGGTAGGGAACACTAGAGCTCTACACCATAGTTTTTCAAGTATTTCATACGCCTGGCGCCGGCCCTaGTCACGCATCCCCGCAGTG | + |
|
Preference number: 5 (lower is better) Translates to: IKVGNTRALHHSFSSISYAWRRP*SRIPAV Trigger: CACTGCGGGGATGCGTGACAAGGGCCGGCGCCAGGC...GTATGAAATACTTGAAAAACTATGGTGTAGAGCTCTAGTGTTCCCTACCTTTAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | GACATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCTACGAAGTCTTTGCATaGCATGGAGAGTTTCCTGTA | + |
|
Preference number: 5 (lower is better) Translates to: DMKMRSLWTLSPKELLEAYEVFA*HGEFPV Trigger: TACAGGAAACTCTCCATGCAATGCAAAGACTTCGTA...GGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCATGTC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACCTTCTCCTCCTGCATTaGGAAAAGTTAGTGATCCTC | + |
|
Preference number: 5 (lower is better) Translates to: MKMRSLWTLSPKELLEANLLLLH*EKLVIL Trigger: GAGGATCACTAACTTTTCCAAATGCAGGAGGAGAAG...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | GGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTGCAGGTGGCTGCCCCACTACGAAGTCTTaGCATTGCATGGAGAGTTTC | + |
|
Preference number: 5 (lower is better) Translates to: GVLLPTLCYSQGLTAGGCPTTKS*HCMESF Trigger: GAAACTCTCCATGCAATGCAAAGACTTCGTAGTGGG...GCAGCCACCTGCAGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | ATGAAGATGAGATCGCTGTGGACCCTGTCCCCCAAGGAACTCTTGGAGGCCAACATAGCAATTAGCATGTaGAGTAAAACGACCACCATA | + |
|
Preference number: 5 (lower is better) Translates to: MKMRSLWTLSPKELLEANIAISM*SKTTTI Trigger: TATGGTGGTCGTTTTACTCAACATGCTAATTGCTAT...GTTGGCCTCCAAGAGTTCCTTGGGGGACAGGGTCCACAGCGATCTCATCTTCAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | ATTTCATACTTAGGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTAGCTTGGCCAGCTCATaGCTGAGCTCCAGTGCTGTG | + |
|
Preference number: 5 (lower is better) Translates to: ISYLGVLLPTLCYSQGLTSLASS*LSSSAV Trigger: CACAGCACTGGAGCTCAGCAATGAGCTGGCCAAGCT...AGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCCTAAGTATGAAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS TCA 90 bp | CACTCACATCTCAGCACACTGGGGTTCAGTTTCTCACTGAGTTTATaGATCAAGATGGCTAATTCCTCCGTCGCTTGGCTCTTATCTTCT | + |
|
Preference number: 5 (lower is better) Translates to: HSHLSTLGFSFSLSL*IKMANSSVAWLLSS Trigger: AGAAGATAAGAGCCAAGCGACGGAGGAATTAGCCATCTTGATTCATAAACTCAGTGAGAAACTGAACCCCAGTGTGCTGAGATGTGAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | ATTTCATACTTAGGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTTGTCAAAAGCTGCTGTaGGCAGTTGGGGTGAGCCAC | + |
|
Preference number: 5 (lower is better) Translates to: ISYLGVLLPTLCYSQGLTCQKLL*AVGVSH Trigger: GTGGCTCACCCCAACTGCCAACAGCAGCTTTTGACA...AGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCCTAAGTATGAAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | ATTTCATACTTAGGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTCTTCACCCTGAAGATTaGCTTGGGGTAGTCGATAAC | + |
|
Preference number: 5 (lower is better) Translates to: ISYLGVLLPTLCYSQGLTLHPED*LGVVDN Trigger: GTTATCGACTACCCCAAGCAAATCTTCAGGGTGAAG...AGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCCTAAGTATGAAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | ATTTCATACTTAGGAGTATTATTGCCCACGTTGTGCTATAGTCAAGGCTTGACTTACTTAATGGCAAGTTaGACACGACTCAGTGACGCT | + |
|
Preference number: 5 (lower is better) Translates to: ISYLGVLLPTLCYSQGLTYLMAS*TRLSDA Trigger: AGCGTCACTGAGTCGTGTCAAACTTGCCATTAAGTA...AGTCAAGCCTTGACTATAGCACAACGTGGGCAATAATACTCCTAAGTATGAAAT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | ATAAAGGTAGGGAACACTAGAGCTCTACACCATAGTTTTTCAAGTATTTCATACAATCTGTCCGAGGCGTaGAATACAAGCAGACCCAGA | + |
|
Preference number: 5 (lower is better) Translates to: IKVGNTRALHHSFSSISYNLSEA*NTSRPR Trigger: TCTGGGTCTGCTTGTATTCAACGCCTCGGACAGATT...GTATGAAATACTTGAAAAACTATGGTGTAGAGCTCTAGTGTTCCCTACCTTTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | ATAAAGGTAGGGAACACTAGAGCTCTACACCATAGTTTTTCAAGTATTTCATACGGTTTAACCTGGACTTaGAGTTACCCATGCCCAGTT | + |
|
Preference number: 5 (lower is better) Translates to: IKVGNTRALHHSFSSISYGLTWT*SYPCPV Trigger: AACTGGGCATGGGTAACTCAAAGTCCAGGTTAAACC...GTATGAAATACTTGAAAAACTATGGTGTAGAGCTCTAGTGTTCCCTACCTTTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS-3UTR CAA 90 bp | ATAAAGGTAGGGAACACTAGAGCTCTACACCATAGTTTTTCAAGTATTTCATACAAGAGAACCATGAACTaGAATATGTCCTTCACAGTC | + |
|
Preference number: 5 (lower is better) Translates to: IKVGNTRALHHSFSSISYKRTMN*NMSFTV Trigger: GACTGTGAAGGACATATTCAAGTTCATGGTTCTCTT...GTATGAAATACTTGAAAAACTATGGTGTAGAGCTCTAGTGTTCCCTACCTTTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS GCA 72 bp | CTGCCTGGCGCCGGCCCTTGTCACGCATCCCCGCAGTaGGCCACCTGGATGGGCTGCCCTCCGACGACGCGT | + |
|
Preference number: 6 (lower is better) Translates to: LPGAGPCHASPQ*ATWMGCPPTTR Trigger: ACGCGTCGTCGGAGGGCAGCCCATCCAGGTGGCGCACTGCGGGGATGCGTGACAAGGGCCGGCGCCAGGCAG 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS CAA 90 bp | GCACCGAACATGAAGGCCGGGCCACGCACTGCCTGGCGCCGGCCCTaGTCACGCATCCCCGCAGTGCGCCACCTGGATGGGCTGCCCTCC | + |
|
Preference number: 6 (lower is better) Translates to: APNMKAGPRTAWRRP*SRIPAVRHLDGLPS Trigger: GGAGGGCAGCCCATCCAGGTGGCGCACTGCGGGGATGCGTGACAAGGGCCGGCGCCAGGCAGTGCGTGGCCCGGCCTTCATGTTCGGTGC 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS CCA 72 bp | CGAGCACCGAACATGAAGGCCGGGCCACGCACTGCCTaGCGCCGGCCCTTGTCACGCATCCCCGCAGTGCGC | + |
|
Preference number: 6 (lower is better) Translates to: RAPNMKAGPRTA*RRPLSRIPAVR Trigger: GCGCACTGCGGGGATGCGTGACAAGGGCCGGCGCCAGGCAGTGCGTGGCCCGGCCTTCATGTTCGGTGCTCG 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS CAA 72 bp | ATGAAGGCCGGGCCACGCACTGCCTGGCGCCGGCCCTaGTCACGCATCCCCGCAGTGCGCCACCTGGATGGG | + |
|
Preference number: 6 (lower is better) Translates to: MKAGPRTAWRRP*SRIPAVRHLDG Trigger: CCCATCCAGGTGGCGCACTGCGGGGATGCGTGACAAGGGCCGGCGCCAGGCAGTGCGTGGCCCGGCCTTCAT 72% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS GCA 72 bp | CCCACGAGCACCGAACATGAAGGCCGGGCCACGCACTaGCTGGCGCCGGCCCTTGTCACGCATCCCCGCAGT | + |
|
Preference number: 6 (lower is better) Translates to: PTSTEHEGRATH*LAPALVTHPRS Trigger: ACTGCGGGGATGCGTGACAAGGGCCGGCGCCAGGCAGTGCGTGGCCCGGCCTTCATGTTCGGTGCTCGTGGG 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS TCA 72 bp | AGAAGTCATCATCTCGCAGTTCTTGCTCGCAAGGGCTaGGGGTCAGGCGCCGGCTGGCTGCAAAGCCTGGGT | + |
|
Preference number: 6 (lower is better) Translates to: RSHHLAVLARKG*GSGAGWLQSLG Trigger: ACCCAGGCTTTGCAGCCAGCCGGCGCCTGACCCTCAGCCCTTGCGAGCAAGAACTGCGAGATGATGACTTCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS TCA 72 bp | GGGAGCGTGACTTCGCTCAGATCGCTCTCCTGCACGTaGCTATCCACATACTGCTGCGCCTTCGTGGCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: GSVTSLRSLSCT*LSTYCCAFVAC Trigger: GCAGGCCACGAAGGCGCAGCAGTATGTGGATAGTCACGTGCAGGAGAGCGATCTGAGCGAAGTCACGCTCCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS GCA 72 bp | GGCCTCTCGATGCGTGCACCCTTGAGTAGCAGCAGGTaGACCACCTCGTACTTATGGCAGTGTGCAGCCAGG | + |
|
Preference number: 6 (lower is better) Translates to: GLSMRAPLSSSR*TTSYLWQCAAR Trigger: CCTGGCTGCACACTGCCATAAGTACGAGGTGGTGCACCTGCTGCTACTCAAGGGTGCACGCATCGAGAGGCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS GCA 72 bp | CGATGTACTCCCGGGGCCCCTCCAGCCACAGCTCCTTaGACTCAGACCACATCATCCCAAGAACCCAGACCA | + |
|
Preference number: 6 (lower is better) Translates to: RCTPGAPPATAP*TQTTSSQEPRP Trigger: TGGTCTGGGTTCTTGGGATGATGTGGTCTGAGTGCAAGGAGCTGTGGCTGGAGGGGCCCCGGGAGTACATCG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS CAA 72 bp | GGAAGACCCAAGGCCACGACCAACACGACCAGACACTaGATAGCGATGGTCTGCTCCCGGAGGCCGGAAAGG | + |
|
Preference number: 6 (lower is better) Translates to: GRPKATTNTTRH*IAMVCSRRPER Trigger: CCTTTCCGGCCTCCGGGAGCAGACCATCGCTATCAAGTGTCTGGTCGTGTTGGTCGTGGCCTTGGGTCTTCC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS CAA 90 bp | GCGAGGAATGGAAGACCCAAGGCCACGACCAACACGACCAGACACTaGATAGCGATGGTCTGCTCCCGGAGGCCGGAAAGGTTCTCATAC | + |
|
Preference number: 6 (lower is better) Translates to: ARNGRPKATTNTTRH*IAMVCSRRPERFSY Trigger: GTATGAGAACCTTTCCGGCCTCCGGGAGCAGACCATCGCTATCAAGTGTCTGGTCGTGTTGGTCGTGGCCTTGGGTCTTCCATTCCTCGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS TCA 72 bp | AGAAGTAGTCGTGTGGCCTCTCGATGCGTGCACCCTTaGGTAGCAGCAGGTGCACCACCTCGTACTTATGGC | + |
|
Preference number: 6 (lower is better) Translates to: RSSRVASRCVHP*VAAGAPPRTYG Trigger: GCCATAAGTACGAGGTGGTGCACCTGCTGCTACTCAAGGGTGCACGCATCGAGAGGCCACACGACTACTTCT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS GCA 72 bp | GGGGCTTCGAAGAATCTTCCCCAGCCTGCTACAAGGTaGAATCCAATAGCCGATGGCGAGGAATGGAAGACC | + |
|
Preference number: 6 (lower is better) Translates to: GASKNLPQPATR*NPIADGEEWKT Trigger: GGTCTTCCATTCCTCGCCATCGGCTATTGGATTGCACCTTGTAGCAGGCTGGGGAAGATTCTTCGAAGCCCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
||
| CDS GCA 72 bp | TCCAAGAGAGATCTGCAAGGGCCCAAAGCTCTCGTTTaGAGGGAGGATGTACGCAATCCGGGAGAAGCTGAG | + |
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Preference number: 6 (lower is better) Translates to: SKRDLQGPKALV*REDVRNPGEAE Trigger: CTCAGCTTCTCCCGGATTGCGTACATCCTCCCTGCAAACGAGAGCTTTGGGCCCTTGCAGATCTCTCTTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS GCA 72 bp | ACGACCAACACGACCAGACACTTGATAGCGATGGTCTaGTCCCGGAGGCCGGAAAGGTTCTCATACCAGATT | + |
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Preference number: 6 (lower is better) Translates to: TTNTTRHLIAMV*SRRPERFSYQI Trigger: AATCTGGTATGAGAACCTTTCCGGCCTCCGGGAGCAGACCATCGCTATCAAGTGTCTGGTCGTGTTGGTCGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS GCA 72 bp | TTAATGGCAAGTTTGACACGACTCAGTGACGCTTTGTaGCCGTGTCTTTCCAGGGGCTCGGCTGATTCCAGA | + |
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Preference number: 6 (lower is better) Translates to: LMASLTRLSDAL*PCLSRGSADSR Trigger: TCTGGAATCAGCCGAGCCCCTGGAAAGACACGGGCACAAAGCGTCACTGAGTCGTGTCAAACTTGCCATTAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS CAA 72 bp | TACTTAATGGCAAGTTTGACACGACTCAGTGACGCTTaGTGCCCGTGTCTTTCCAGGGGCTCGGCTGATTCC | + |
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Preference number: 6 (lower is better) Translates to: YLMASLTRLSDA*CPCLSRGSADS Trigger: GGAATCAGCCGAGCCCCTGGAAAGACACGGGCACAAAGCGTCACTGAGTCGTGTCAAACTTGCCATTAAGTA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS CAA 72 bp | CGTCCACGTGAACTGGGTGGTCTTCACCCTGAAGATTaGCTTGGGGTAGTCGATAACAGTGATGTTTGGCAG | + |
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Preference number: 6 (lower is better) Translates to: RPRELGGLHPED*LGVVDNSDVWQ Trigger: CTGCCAAACATCACTGTTATCGACTACCCCAAGCAAATCTTCAGGGTGAAGACCACCCAGTTCACGTGGACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS GCA 72 bp | TTGAATATGTCCTTCACAGTCCTTCCAAGAGAGATCTaGAAGGGCCCAAAGCTCTCGTTTGCAGGGAGGATG | + |
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Preference number: 6 (lower is better) Translates to: LNMSFTVLPREI*KGPKLSFAGRM Trigger: CATCCTCCCTGCAAACGAGAGCTTTGGGCCCTTGCAGATCTCTCTTGGAAGGACTGTGAAGGACATATTCAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS CCA 72 bp | GAAGATTTGCTTGGGGTAGTCGATAACAGTGATGTTTaGCAGCGTGGTGATGCCTTCAAATCTGTCCGAGGC | + |
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Preference number: 6 (lower is better) Translates to: EDLLGVVDNSDV*QRGDAFKSVRG Trigger: GCCTCGGACAGATTTGAAGGCATCACCACGCTGCCAAACATCACTGTTATCGACTACCCCAAGCAAATCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS CCA 72 bp | TTTGTCTCTAGCATAGGTGAAATATTGAACCTCAGGTaGGAGCGTGACTTCGCTCAGATCGCTCTCCTGCAC | + |
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Preference number: 6 (lower is better) Translates to: FVSSIGEILNLR*ERDFAQIALLH Trigger: GTGCAGGAGAGCGATCTGAGCGAAGTCACGCTCCCACCTGAGGTTCAATATTTCACCTATGCTAGAGACAAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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| CDS TCA 72 bp | CTCAGCACACTGGGGTTCAGTTTCTCACTGAGTTTATaGATCAAGATGGCTAATTCCTCCGTCGCTTGGCTC | + |
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Preference number: 6 (lower is better) Translates to: LSTLGFSFSLSL*IKMANSSVAWL Trigger: GAGCCAAGCGACGGAGGAATTAGCCATCTTGATTCATAAACTCAGTGAGAAACTGAACCCCAGTGTGCTGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029271.5 |
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