Pregenerated sensors for TRPC1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032839Ensembl transcript IDs: ENSMUST00000053785.10, ENSMUST00000189137.7, ENSMUST00000190497.2, ENSMUST00000190604.7
Found 210 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
Type | Sensor | Details |
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3UTR GCA 90 bp | CCTCAGCTGCCCCAGGGTAGGTGGTGCTCACAGACCAGGGCTGTCTaGACTCTGGCCTCAATGCCGGCTCACATTCACCAAGCGCTCTTC | + |
Preference number: 1 (lower is better) Translates to: PQLPQGRWCSQTRAV*TLASMPAHIHQALF Trigger: GAAGAGCGCTTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGAGCACCACCTACCCTGGGGCAGCTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR CCA 90 bp | GGTTCTCCACGGTGGCCTGGTCTGTGCTCTGCATCTTCTGTCGCATaGACGTCAGGTAGCGGTGCACCAGGCAGCACATCACCTTCTGGT | + |
Preference number: 1 (lower is better) Translates to: GSPRWPGLCSASSVA*TSGSGAPGSTSPSG Trigger: ACCAGAAGGTGATGTGCTGCCTGGTGCACCGCTACCTGACGTCCATGCGACAGAAGATGCAGAGCACAGACCAGGCCACCGTGGAGAACC 60% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR TCA 90 bp | GCTCTGAGGAAAACACTTTGCAAGAGTTGCTCAAGAGCCTTCAGCTaGAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCA | + |
Preference number: 1 (lower is better) Translates to: ALRKTLCKSCSRAFS*KESSFPQGSRPLQP Trigger: TGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGCTGAAGGCTCTTGAGCAACTCTTGCAAAGTGTTTTCCTCAGAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR TCA 90 bp | CCAGGCCTCTCCAGCCAAGCCCACTGTGACCAGCATGTGACCACATaGATGGTGACAAGCAGCTTCAACTTTGTAATGGTGAGTTTTACT | + |
Preference number: 1 (lower is better) Translates to: PGLSSQAHCDQHVTT*MVTSSFNFVMVSFT Trigger: AGTAAAACTCACCATTACAAAGTTGAAGCTGCTTGTCACCATTCATGTGGTCACATGCTGGTCACAGTGGGCTTGGCTGGAGAGGCCTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR GCA 90 bp | AGAGCAAAGCAGGTGCCAATGAACGAGTGGAAGGTGTCATTGCTTTaGTGTTCGCAGAAGATGCCCACACAGTCCTTCTGCTCTTTGGAA | + |
Preference number: 1 (lower is better) Translates to: RAKQVPMNEWKVSLL*CSQKMPTQSFCSLE Trigger: TTCCAAAGAGCAGAAGGACTGTGTGGGCATCTTCTGCGAACAGCAAAGCAATGACACCTTCCACTCGTTCATTGGCACCTGCTTTGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR GCA 90 bp | ACAAATGTAAAAAGCAAGATGAAAGCTAACACTAGAATCCTCAGCTaGCCCAGGGTAGGTGGTGCTCACAGACCAGGGCTGTCTGCACTC | + |
Preference number: 1 (lower is better) Translates to: TNVKSKMKANTRILS*PRVGGAHRPGLSAL Trigger: GAGTGCAGACAGCCCTGGTCTGTGAGCACCACCTACCCTGGGGCAGCTGAGGATTCTAGTGTTAGCTTTCATCTTGCTTTTTACATTTGT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR TCA 90 bp | CCCTTATTTCATTTCGGAATTTTGACAGATCTTGGCGCAGTTCATTaGGGTTCTCCACGGTGGCCTGGTCTGTGCTCTGCATCTTCTGTC | + |
Preference number: 1 (lower is better) Translates to: PLFHFGILTDLGAVH*GSPRWPGLCSASSV Trigger: GACAGAAGATGCAGAGCACAGACCAGGCCACCGTGGAGAACCTCAATGAACTGCGCCAAGATCTGTCAAAATTCCGAAATGAAATAAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR CCA 90 bp | TCTTCTAGTAGTCCTCGTTTGTCAAGAGGCTCATCGCTAGATGTATaGTTCAGGATAACTTCCAGTTCACGAGAATTCCGGGCTTGTGCG | + |
Preference number: 1 (lower is better) Translates to: SSSSPRLSRGSSLDV*FRITSSSREFRACA Trigger: CGCACAAGCCCGGAATTCTCGTGAACTGGAAGTTATCCTGAACCATACATCTAGCGATGAGCCTCTTGACAAACGAGGACTACTAGAAGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR CCA 90 bp | GCCAGAAGATGCCAACTGTCAAAACAGTCATTATCTTCTTACAGGTaGGCTTACGGCGGTAACCTGACATCTGTCCAAACCAAACCGTGT | + |
Preference number: 1 (lower is better) Translates to: ARRCQLSKQSLSSYR*AYGGNLTSVQTKPC Trigger: ACACGGTTTGGTTTGGACAGATGTCAGGTTACCGCCGTAAGCCCACCTGTAAGAAGATAATGACTGTTTTGACAGTTGGCATCTTCTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR TCA 90 bp | CAAAACAGTCATTATCTTCTTACAGGTGGGCTTACGGCGGTAACCTaGCATCTGTCCAAACCAAACCGTGTTCAGGAACTGCTGGCAATT | + |
Preference number: 1 (lower is better) Translates to: QNSHYLLTGGLTAVT*HLSKPNRVQELLAI Trigger: AATTGCCAGCAGTTCCTGAACACGGTTTGGTTTGGACAGATGTCAGGTTACCGCCGTAAGCCCACCTGTAAGAAGATAATGACTGTTTTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR GCA 90 bp | AAAGTCATGAAACTTGTTGTGAGCCACCACTTTGAGGGCAAAGGTTaGCAAGTAAAGGGAATTCATAACAAAGCTGAGCTGGTTACGCGA | + |
Preference number: 1 (lower is better) Translates to: KVMKLVVSHHFEGKG*QVKGIHNKAELVTR Trigger: TCGCGTAACCAGCTCAGCTTTGTTATGAATTCCCTTTACTTGGCAACCTTTGCCCTCAAAGTGGTGGCTCACAACAAGTTTCATGACTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR TCA 90 bp | CATGCGACAGCTGGGAAACCTTCAGTCACACCCTCACATGAACACTaGAAGGCAGTCAGATTCTCTTTCTATTTCAAATGGAATAAACAG | + |
Preference number: 1 (lower is better) Translates to: HATAGKPSVTPSHEH*KAVRFSFYFKWNKQ Trigger: CTGTTTATTCCATTTGAAATAGAAAGAGAATCTGACTGCCTTTCAGTGTTCATGTGAGGGTGTGACTGAAGGTTTCCCAGCTGTCGCATG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR CCA 90 bp | GCAAATCCATTTACTGAGGCTACTGATCATATAGCAGATCGTCTTTaGAGAAGGAATAATGTTGAAAGGTGGGGGCAGTGTACATTTGTC | + |
Preference number: 1 (lower is better) Translates to: ANPFTEATDHIADRL*RRNNVERWGQCTFV Trigger: GACAAATGTACACTGCCCCCACCTTTCAACATTATTCCTTCTCCAAAGACGATCTGCTATATGATCAGTAGCCTCAGTAAATGGATTTGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR GCA 90 bp | ATTTGGGAGCTATCAAATAGCATAGTGACAAAACTGGCCAGAAGATaGCAACTGTCAAAACAGTCATTATCTTCTTACAGGTGGGCTTAC | + |
Preference number: 1 (lower is better) Translates to: IWELSNSIVTKLARR*QLSKQSLSSYRWAY Trigger: GTAAGCCCACCTGTAAGAAGATAATGACTGTTTTGACAGTTGGCATCTTCTGGCCAGTTTTGTCACTATGCTATTTGATAGCTCCCAAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR TCA 90 bp | AAAATAACAGGTGCGACATCCATCGTTGTTGAATATTCTGGATTCTaGATTCGTTCCATAAGTTTTACAATGGTTGGTCTTGATGATCGT | + |
Preference number: 1 (lower is better) Translates to: KITGATSIVVEYSGF*IRSISFTMVGLDDR Trigger: ACGATCATCAAGACCAACCATTGTAAAACTTATGGAACGAATTCAGAATCCAGAATATTCAACAACGATGGATGTCGCACCTGTTATTTT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190497.2 |
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3UTR-3UTR TCA 90 bp | GGCCTGGTCTGTGCTCTGCATCTTCTGTCGCATGGACGTCAGGTAGCGGTGCACCCACCTCCACAAGGCTaGGTTCCTTTAAGTCAGCAC | + |
Preference number: 2 (lower is better) Translates to: GLVCALHLLSHGRQVAVHPPPQG*VPLSQH Trigger: GTGCTGACTTAAAGGAACTCAGCCTTGTGGAGGTGG...GTGCACCGCTACCTGACGTCCATGCGACAGAAGATGCAGAGCACAGACCAGGCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | CAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAAGCGCTCTTACTCAGAGATCTGCCTaGCTCTGCCTCCTGTATGCT | + |
Preference number: 2 (lower is better) Translates to: QGCLHSGLNAGSHSPSALTQRSA*LCLLYA Trigger: AGCATACAGGAGGCAGAGGCAGGCAGATCTCTGAGT...AAGAGCGCTTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR-3UTR CCA 90 bp | TGGCGCAGTTCATTGAGGTTCTCCACGGTGGCCTGGTCTGTGCTCTGCATCTTCTCACAGCCAACAGCATaGGGCTTGGGCAAAGACACA | + |
Preference number: 2 (lower is better) Translates to: WRSSLRFSTVAWSVLCIFSQPTA*GLGKDT Trigger: TGTGTCTTTGCCCAAGCCCCATGCTGTTGGCTGTGA...GAAGATGCAGAGCACAGACCAGGCCACCGTGGAGAACCTCAATGAACTGCGCCA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | GGACTGCAGCTCTTCCCCATAGCTAAACCTGGTGACAAAGATGGCCACGTGCGCCCCACACAGTCCTTCTaGTCTTTGGAAGTGTACCCT | + |
Preference number: 2 (lower is better) Translates to: GLQLFPIAKPGDKDGHVRPTQSF*SLEVYP Trigger: AGGGTACACTTCCAAAGAGCAGAAGGACTGTGTGGG...GCGCACGTGGCCATCTTTGTCACCAGGTTTAGCTATGGGGAAGAGCTGCAGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR TCA 90 bp | TCTTCTGTCGCATGGACGTCAGGTAGCGGTGCACCAGGCAGCACATCACCTTCTGAACTGCTGGCAATTTaGCTGGGAGACAAACTCCTT | + |
Preference number: 2 (lower is better) Translates to: SSVAWTSGSGAPGSTSPSELLAI*LGDKLL Trigger: AAGGAGTTTGTCTCCCAGTCAAATTGCCAGCAGTTC...AGAAGGTGATGTGCTGCCTGGTGCACCGCTACCTGACGTCCATGCGACAGAAGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR TCA 90 bp | CGGAATTTTGACAGATCTTGGCGCAGTTCATTGAGGTTCTCCACGGTGGCCTGGTGTGAGCCACCACTTTaGGGGCAAAGGTTGCCAAGT | + |
Preference number: 2 (lower is better) Translates to: RNFDRSWRSSLRFSTVAWCEPPL*GQRLPS Trigger: ACTTGGCAACCTTTGCCCTCAAAGTGGTGGCTCACA...CCAGGCCACCGTGGAGAACCTCAATGAACTGCGCCAAGATCTGTCAAAATTCCG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | CAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAAGCGCTCTTCTGAGGAAAACACTTTaGAAGAGTTGCTCAAGAGCC | + |
Preference number: 2 (lower is better) Translates to: QGCLHSGLNAGSHSPSALLRKTL*KSCSRA Trigger: GGCTCTTGAGCAACTCTTGCAAAGTGTTTTCCTCAG...AAGAGCGCTTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR-3UTR TCA 90 bp | GCTCTTGTGAAGCATCGCCACGAGCAGCTTCGTCAGCACAATCACAACCACAACCAAAGCAGGTGCCAATaGACGAGTGGAAGGTGTCAT | + |
Preference number: 2 (lower is better) Translates to: ALVKHRHEQLRQHNHNHNQSRCQ*TSGRCH Trigger: ATGACACCTTCCACTCGTTCATTGGCACCTGCTTTG...GTTGTGGTTGTGATTGTGCTGACGAAGCTGCTCGTGGCGATGCTTCACAAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | TGGCGCAGTTCATTGAGGTTCTCCACGGTGGCCTGGTCTGTGCTCTGCATCTTCTTGCAGAACACAGTGTaGATTCACAGCCAACAGCAT | + |
Preference number: 2 (lower is better) Translates to: WRSSLRFSTVAWSVLCIFLQNTV*IHSQQH Trigger: ATGCTGTTGGCTGTGAATGCACACTGTGTTCTGCAA...GAAGATGCAGAGCACAGACCAGGCCACCGTGGAGAACCTCAATGAACTGCGCCA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | GCTCTTGTGAAGCATCGCCACGAGCAGCTTCGTCAGCACAATCACAACCACAACACCGTGTTCAGGAACTaGTGGCAATTTGACTGGGAG | + |
Preference number: 2 (lower is better) Translates to: ALVKHRHEQLRQHNHNHNTVFRN*WQFDWE Trigger: CTCCCAGTCAAATTGCCAGCAGTTCCTGAACACGGT...GTTGTGGTTGTGATTGTGCTGACGAAGCTGCTCGTGGCGATGCTTCACAAGAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | CTTCAGCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGCTGGCATTAAAGGCGTaGATTACCATGACTGGCTTA | + |
Preference number: 2 (lower is better) Translates to: LQLKGKQLSSGLQASPAKLALKA*ITMTGL Trigger: TAAGCCAGTCATGGTAATGCACGCCTTTAATGCCAG...CTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGCTGAAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR-3UTR CCA 90 bp | TTCTCCACGGTGGCCTGGTCTGTGCTCTGCATCTTCTGTCGCATGGACGTCAGGATAACAAAGCTGAGCTaGTTACGCGATTCTTCTAGG | + |
Preference number: 2 (lower is better) Translates to: FSTVAWSVLCIFCRMDVRITKLS*LRDSSR Trigger: CCTAGAAGAATCGCGTAACCAGCTCAGCTTTGTTAT...CCTGACGTCCATGCGACAGAAGATGCAGAGCACAGACCAGGCCACCGTGGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR CAA 90 bp | CAGAGCAAAGCAGGTGCCAATGAACGAGTGGAAGGTGTCATTGCTTaGCTGTTCGCAGAAGATGCCCACACAGTCCTTCTGCTCTTTGGA | + |
Preference number: 2 (lower is better) Translates to: QSKAGANERVEGVIA*LFAEDAHTVLLLFG Trigger: TCCAAAGAGCAGAAGGACTGTGTGGGCATCTTCTGCGAACAGCAAAGCAATGACACCTTCCACTCGTTCATTGGCACCTGCTTTGCTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR TCA 90 bp | GCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGCCCACATACTGAACTCTGTGTaGACTCCTAAAACAAGAGAT | + |
Preference number: 2 (lower is better) Translates to: AERKAAFLRAPGLSSQAHILNSV*TPKTRD Trigger: ATCTCTTGTTTTAGGAGTTCACACAGAGTTCAGTAT...GTGGGCTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR-3UTR CCA 90 bp | AGCAAAGCAGGTGCCAATGAACGAGTGGAAGGTGTCATTGCTTTGCTGTTCGCATCACAGCCAACAGCATaGGGCTTGGGCAAAGACACA | + |
Preference number: 2 (lower is better) Translates to: SKAGANERVEGVIALLFASQPTA*GLGKDT Trigger: TGTGTCTTTGCCCAAGCCCCATGCTGTTGGCTGTGA...TGCGAACAGCAAAGCAATGACACCTTCCACTCGTTCATTGGCACCTGCTTTGCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | TTCTCCACGGTGGCCTGGTCTGTGCTCTGCATCTTCTGTCGCATGGACGTCAGGTTATCAGAGCTGGACTaGCCAGACATCTATAGATAT | + |
Preference number: 2 (lower is better) Translates to: FSTVAWSVLCIFCRMDVRLSELD*PDIYRY Trigger: ATATCTATAGATGTCTGGCCAGTCCAGCTCTGATAA...CCTGACGTCCATGCGACAGAAGATGCAGAGCACAGACCAGGCCACCGTGGAGAA 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | GCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGCCCACCTTTGTTTTATAAAATaGAGTGGGCCATGTGTACAC | + |
Preference number: 2 (lower is better) Translates to: AERKAAFLRAPGLSSQAHLCFIK*SGPCVH Trigger: GTGTACACATGGCCCACTCCATTTTATAAAACAAAG...GTGGGCTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR-3UTR TCA 90 bp | GTGAAGCATCGCCACGAGCAGCTTCGTCAGCACAATCACAACCACAACATTGTACTTACGGCGGTAACCTaGCATCTGTCCAAACCAAAC | + |
Preference number: 2 (lower is better) Translates to: VKHRHEQLRQHNHNHNIVLTAVT*HLSKPN Trigger: GTTTGGTTTGGACAGATGTCAGGTTACCGCCGTAAG...TACAATGTTGTGGTTGTGATTGTGCTGACGAAGCTGCTCGTGGCGATGCTTCAC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | TGGCGCAGTTCATTGAGGTTCTCCACGGTGGCCTGGTCTGTGCTCTGCATCTTCAATTTTGACAGATCTTaGCGCAGTTCATTGAGGTTC | + |
Preference number: 2 (lower is better) Translates to: WRSSLRFSTVAWSVLCIFNFDRS*RSSLRF Trigger: GAACCTCAATGAACTGCGCCAAGATCTGTCAAAATT...GAAGATGCAGAGCACAGACCAGGCCACCGTGGAGAACCTCAATGAACTGCGCCA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR TCA 90 bp | TCACAGACCAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAAGATGGAGTTAAGCACTaGCCAACTAAGAAAACAAAA | + |
Preference number: 2 (lower is better) Translates to: SQTRAVCTLASMPAHIHQDGVKH*PTKKTK Trigger: TTTTGTTTTCTTAGTTGGTCAGTGCTTAACTCCATC...TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR-3UTR GCA 90 bp | GCTCTTGTGAAGCATCGCCACGAGCAGCTTCGTCAGCACAATCACAACCACAACAGAATTCCGGGCTTGTaGGAGCAAATCTTTAGCAAA | + |
Preference number: 2 (lower is better) Translates to: ALVKHRHEQLRQHNHNHNRIPGL*EQIFSK Trigger: TTTGCTAAAGATTTGCTCGCACAAGCCCGGAATTCT...GTTGTGGTTGTGATTGTGCTGACGAAGCTGCTCGTGGCGATGCTTCACAAGAGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | GTGAAGCATCGCCACGAGCAGCTTCGTCAGCACAATCACAACCACAACATTGTAACAAAGATGGCCACGTaGGCTAAGGAGAAGATGTAC | + |
Preference number: 2 (lower is better) Translates to: VKHRHEQLRQHNHNHNIVTKMAT*AKEKMY Trigger: GTACATCTTCTCCTTAGCGCACGTGGCCATCTTTGT...TACAATGTTGTGGTTGTGATTGTGCTGACGAAGCTGCTCGTGGCGATGCTTCAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | TCATCGCTAGATGTATGGTTCAGGATAACTTCCAGTTCACGAGAATTCCGGGCTCAACAGCATGGGGCTTaGGCAAAGACACATCCTGCT | + |
Preference number: 2 (lower is better) Translates to: SSLDVWFRITSSSREFRAQQHGA*AKTHPA Trigger: AGCAGGATGTGTCTTTGCCCAAGCCCCATGCTGTTG...AGCCCGGAATTCTCGTGAACTGGAAGTTATCCTGAACCATACATCTAGCGATGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR CAA 90 bp | TCCCTTATTTCATTTCGGAATTTTGACAGATCTTGGCGCAGTTCATaGAGGTTCTCCACGGTGGCCTGGTCTGTGCTCTGCATCTTCTGT | + |
Preference number: 2 (lower is better) Translates to: SLISFRNFDRSWRSS*RFSTVAWSVLCIFC Trigger: ACAGAAGATGCAGAGCACAGACCAGGCCACCGTGGAGAACCTCAATGAACTGCGCCAAGATCTGTCAAAATTCCGAAATGAAATAAGGGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR TCA 90 bp | CTTGTTGTGAGCCACCACTTTGAGGGCAAAGGTTGCCAAGTAAAGGGAATTCATCTTACGGCGGTAACCTaGCATCTGTCCAAACCAAAC | + |
Preference number: 2 (lower is better) Translates to: LVVSHHFEGKGCQVKGIHLTAVT*HLSKPN Trigger: GTTTGGTTTGGACAGATGTCAGGTTACCGCCGTAAG...ATGAATTCCCTTTACTTGGCAACCTTTGCCCTCAAAGTGGTGGCTCACAACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR TCA 90 bp | TCTTGTAACATCTGTCCCATTGAAATCTGCAGTGGGCCCAAAATAGAGCTGGTTTGTGAGCCACCACTTTaGGGGCAAAGGTTGCCAAGT | + |
Preference number: 2 (lower is better) Translates to: SCNICPIEICSGPKIELVCEPPL*GQRLPS Trigger: ACTTGGCAACCTTTGCCCTCAAAGTGGTGGCTCACA...AACCAGCTCTATTTTGGGCCCACTGCAGATTTCAATGGGACAGATGTTACAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR TCA 90 bp | CGGAATTTTGACAGATCTTGGCGCAGTTCATTGAGGTTCTCCACGGTGGCCTGGTCCTTTAAACTGTTTTaGCGTTTGACCTTGCCTTTC | + |
Preference number: 2 (lower is better) Translates to: RNFDRSWRSSLRFSTVAWSFKLF*RLTLPF Trigger: GAAAGGCAAGGTCAAACGTCAAAACAGTTTAAAGGA...CCAGGCCACCGTGGAGAACCTCAATGAACTGCGCCAAGATCTGTCAAAATTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR TCA 90 bp | CAGCTGGAAGCTCTTGTGAAGCATCGCCACGAGCAGCTTCGTCAGCACAATCACGACATCCATCGTTGTTaGATATTCTGGATTCTGAAT | + |
Preference number: 2 (lower is better) Translates to: QLEALVKHRHEQLRQHNHDIHRC*IFWILN Trigger: ATTCAGAATCCAGAATATTCAACAACGATGGATGTC...GTGATTGTGCTGACGAAGCTGCTCGTGGCGATGCTTCACAAGAGCTTCCAGCTG 48% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190497.2 |
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3UTR-3UTR GCA 90 bp | GCTCTTGTGAAGCATCGCCACGAGCAGCTTCGTCAGCACAATCACAACCACAACTTTGAGGGCAAAGGTTaGCAAGTAAAGGGAATTCAT | + |
Preference number: 2 (lower is better) Translates to: ALVKHRHEQLRQHNHNHNFEGKG*QVKGIH Trigger: ATGAATTCCCTTTACTTGGCAACCTTTGCCCTCAAA...GTTGTGGTTGTGATTGTGCTGACGAAGCTGCTCGTGGCGATGCTTCACAAGAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | ACAGTCCTTCTGCTCTTTGGAAGTGTACCCTTTGTCATAGAGCTGAGTCAGTCCAAGGTGTCATTGCTTTaGTGTTCGCAGAAGATGCCC | + |
Preference number: 2 (lower is better) Translates to: TVLLLFGSVPFVIELSQSKVSLL*CSQKMP Trigger: GGGCATCTTCTGCGAACAGCAAAGCAATGACACCTT...GGACTGACTCAGCTCTATGACAAAGGGTACACTTCCAAAGAGCAGAAGGACTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | TCTTGTAACATCTGTCCCATTGAAATCTGCAGTGGGCCCAAAATAGAGCTGGTTCAACAGCATGGGGCTTaGGCAAAGACACATCCTGCT | + |
Preference number: 2 (lower is better) Translates to: SCNICPIEICSGPKIELVQQHGA*AKTHPA Trigger: AGCAGGATGTGTCTTTGCCCAAGCCCCATGCTGTTG...AACCAGCTCTATTTTGGGCCCACTGCAGATTTCAATGGGACAGATGTTACAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | CGGAATTTTGACAGATCTTGGCGCAGTTCATTGAGGTTCTCCACGGTGGCCTGGTCATCGCTAGATGTATaGTTCAGGATAACTTCCAGT | + |
Preference number: 2 (lower is better) Translates to: RNFDRSWRSSLRFSTVAWSSLDV*FRITSS Trigger: ACTGGAAGTTATCCTGAACCATACATCTAGCGATGA...CCAGGCCACCGTGGAGAACCTCAATGAACTGCGCCAAGATCTGTCAAAATTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | CAACATTGTAAGTTCCAACAATCACAGCTCCAACGAAGGACTGCAGCTCTTCCCTGCTGGCAATTTGACTaGGAGACAAACTCCTTCTGG | + |
Preference number: 2 (lower is better) Translates to: QHCKFQQSQLQRRTAALPCWQFD*ETNSFW Trigger: CCAGAAGGAGTTTGTCTCCCAGTCAAATTGCCAGCA...GGGAAGAGCTGCAGTCCTTCGTTGGAGCTGTGATTGTTGGAACTTACAATGTTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | CCACACAGTCCTTCTGCTCTTTGGAAGTGTACCCTTTGTCATAGAGCTGAGTCATTATCTTCTTACAGGTaGGCTTACGGCGGTAACCTG | + |
Preference number: 2 (lower is better) Translates to: PHSPSALWKCTLCHRAESLSSYR*AYGGNL Trigger: CAGGTTACCGCCGTAAGCCCACCTGTAAGAAGATAA...TGACTCAGCTCTATGACAAAGGGTACACTTCCAAAGAGCAGAAGGACTGTGTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | GCTCTTGTGAAGCATCGCCACGAGCAGCTTCGTCAGCACAATCACAACCACAACTATTCTCTCCAGGGCTaGTCCCATTGTATTTTTCTT | + |
Preference number: 2 (lower is better) Translates to: ALVKHRHEQLRQHNHNHNYSLQG*SHCIFL Trigger: AAGAAAAATACAATGGGACCAGCCCTGGAGAGAATA...GTTGTGGTTGTGATTGTGCTGACGAAGCTGCTCGTGGCGATGCTTCACAAGAGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | CTTCAGCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGTTTTATAAAATGGAGTaGGCCATGTGTACACTGATA | + |
Preference number: 2 (lower is better) Translates to: LQLKGKQLSSGLQASPAKFYKME*AMCTLI Trigger: TATCAGTGTACACATGGCCCACTCCATTTTATAAAA...CTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGCTGAAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR-3UTR TCA 90 bp | CGGAATTTTGACAGATCTTGGCGCAGTTCATTGAGGTTCTCCACGGTGGCCTGGATGATTCTGCCAAATTaGGATTTGGGAGCTATCAAA | + |
Preference number: 2 (lower is better) Translates to: RNFDRSWRSSLRFSTVAWMILPN*DLGAIK Trigger: TTTGATAGCTCCCAAATCTCAATTTGGCAGAATCAT...CCAGGCCACCGTGGAGAACCTCAATGAACTGCGCCAAGATCTGTCAAAATTCCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | AAAGCAAAAAGCCCTTCTGCTACAAGCGTGGGGTGGAATGCATCCCAGTCCTTCTTTGAGGGCAAAGGTTaGCAAGTAAAGGGAATTCAT | + |
Preference number: 2 (lower is better) Translates to: KAKSPSATSVGWNASQSFFEGKG*QVKGIH Trigger: ATGAATTCCCTTTACTTGGCAACCTTTGCCCTCAAA...GAAGGACTGGGATGCATTCCACCCCACGCTTGTAGCAGAAGGGCTTTTTGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | TTTGTCATAGAGCTGAGTCAGTCCAATCGTGAAGGAAAACAGAACAAGGAGGAAGCTGTTCGCAGAAGATaGCCACACAGTCCTTCTGCT | + |
Preference number: 2 (lower is better) Translates to: FVIELSQSNREGKQNKEEAVRRR*PHSPSA Trigger: AGCAGAAGGACTGTGTGGGCATCTTCTGCGAACAGC...TTCCTCCTTGTTCTGTTTTCCTTCACGATTGGACTGACTCAGCTCTATGACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | AAAGCAAAAAGCCCTTCTGCTACAAGCGTGGGGTGGAATGCATCCCAGTCCTTCTCATCGCTAGATGTATaGTTCAGGATAACTTCCAGT | + |
Preference number: 2 (lower is better) Translates to: KAKSPSATSVGWNASQSFSSLDV*FRITSS Trigger: ACTGGAAGTTATCCTGAACCATACATCTAGCGATGA...GAAGGACTGGGATGCATTCCACCCCACGCTTGTAGCAGAAGGGCTTTTTGCTTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | TCTTCTAGTAGTCCTCGTTTGTCAAGAGGCTCATCGCTAGATGTATGGTTCAGGGTGTTCAGGAACTGCTaGCAATTTGACTGGGAGACA | + |
Preference number: 2 (lower is better) Translates to: SSSSPRLSRGSSLDVWFRVFRNC*QFDWET Trigger: TGTCTCCCAGTCAAATTGCCAGCAGTTCCTGAACAC...CCTGAACCATACATCTAGCGATGAGCCTCTTGACAAACGAGGACTACTAGAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | CTTCTGCTACAAGCGTGGGGTGGAATGCATCCCAGTCCTTCCGGTCAGCAAAGTTGCCAAATTGAGATTTaGGAGCTATCAAATAGCATA | + |
Preference number: 2 (lower is better) Translates to: LLLQAWGGMHPSPSGQQSCQIEI*ELSNSI Trigger: TATGCTATTTGATAGCTCCCAAATCTCAATTTGGCA...ACTTTGCTGACCGGAAGGACTGGGATGCATTCCACCCCACGCTTGTAGCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | TTTGTCATAGAGCTGAGTCAGTCCAATCGTGAAGGAAAACAGAACAAGGAGGAACTTCTGCTACAAGCGTaGGGTGGAATGCATCCCAGT | + |
Preference number: 2 (lower is better) Translates to: FVIELSQSNREGKQNKEELLLQA*GGMHPS Trigger: ACTGGGATGCATTCCACCCCACGCTTGTAGCAGAAG...TTCCTCCTTGTTCTGTTTTCCTTCACGATTGGACTGACTCAGCTCTATGACAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR TCA 90 bp | CAACCACAACATTGTAAGTTCCAACAATCACAGCTCCAACGAAGGACTGCAGCTGAGTCAGTCCAATCGTaGAGGAAAACAGAACAAGGA | + |
Preference number: 2 (lower is better) Translates to: QPQHCKFQQSQLQRRTAAESVQS*RKTEQG Trigger: TCCTTGTTCTGTTTTCCTTCACGATTGGACTGACTC...AGCTGCAGTCCTTCGTTGGAGCTGTGATTGTTGGAACTTACAATGTTGTGGTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | GTCCTTCTGCTCTTTGGAAGTGTACCCTTTGTCATAGAGCTGAGTCAGTCCAATTTGCAGAACACAGTGTaGATTCACAGCCAACAGCAT | + |
Preference number: 2 (lower is better) Translates to: VLLLFGSVPFVIELSQSNLQNTV*IHSQQH Trigger: ATGCTGTTGGCTGTGAATGCACACTGTGTTCTGCAA...ATTGGACTGACTCAGCTCTATGACAAAGGGTACACTTCCAAAGAGCAGAAGGAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | CCACACAGTCCTTCTGCTCTTTGGAAGTGTACCCTTTGTCATAGAGCTGAGTCAAGAATTCCGGGCTTGTaGGAGCAAATCTTTAGCAAA | + |
Preference number: 2 (lower is better) Translates to: PHSPSALWKCTLCHRAESRIPGL*EQIFSK Trigger: TTTGCTAAAGATTTGCTCGCACAAGCCCGGAATTCT...TGACTCAGCTCTATGACAAAGGGTACACTTCCAAAGAGCAGAAGGACTGTGTGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | CCACACAGTCCTTCTGCTCTTTGGAAGTGTACCCTTTGTCATAGAGCTGAGTCAAAACTGGCCAGAAGATaGCAACTGTCAAAACAGTCA | + |
Preference number: 2 (lower is better) Translates to: PHSPSALWKCTLCHRAESKLARR*QLSKQS Trigger: TGACTGTTTTGACAGTTGGCATCTTCTGGCCAGTTT...TGACTCAGCTCTATGACAAAGGGTACACTTCCAAAGAGCAGAAGGACTGTGTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | CAGCACAATCACAACCACAACATTGTAAGTTCCAACAATCACAGCTCCAACGAACCCACACAGTCCTTCTaGTCTTTGGAAGTGTACCCT | + |
Preference number: 2 (lower is better) Translates to: QHNHNHNIVSSNNHSSNEPTQSF*SLEVYP Trigger: AGGGTACACTTCCAAAGAGCAGAAGGACTGTGTGGG...TTCGTTGGAGCTGTGATTGTTGGAACTTACAATGTTGTGGTTGTGATTGTGCTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | CACGAGCAGCTTCGTCAGCACAATCACAACCACAACATTGTAAGTTCCAACAATAAGGTGTCATTGCTTTaGTGTTCGCAGAAGATGCCC | + |
Preference number: 2 (lower is better) Translates to: HEQLRQHNHNHNIVSSNNKVSLL*CSQKMP Trigger: GGGCATCTTCTGCGAACAGCAAAGCAATGACACCTT...ATTGTTGGAACTTACAATGTTGTGGTTGTGATTGTGCTGACGAAGCTGCTCGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | CTTCAGTCACACCCTCACATGAACACTGAAAGGCAGTCAGATTCTCTTTCTATTTTGAACTCAGAGATCTaGCTGCCTCTGCCTCCTGTA | + |
Preference number: 2 (lower is better) Translates to: LQSHPHMNTERQSDSLSILNSEI*LPLPPV Trigger: TACAGGAGGCAGAGGCAGGCAGATCTCTGAGTTCAA...AATAGAAAGAGAATCTGACTGCCTTTCAGTGTTCATGTGAGGGTGTGACTGAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR-3UTR CCA 90 bp | ACAGTCCTTCTGCTCTTTGGAAGTGTACCCTTTGTCATAGAGCTGAGTCAGTCCATAACAAAGCTGAGCTaGTTACGCGATTCTTCTAGG | + |
Preference number: 2 (lower is better) Translates to: TVLLLFGSVPFVIELSQSITKLS*LRDSSR Trigger: CCTAGAAGAATCGCGTAACCAGCTCAGCTTTGTTAT...GGACTGACTCAGCTCTATGACAAAGGGTACACTTCCAAAGAGCAGAAGGACTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR TCA 90 bp | CTTCAGTCACACCCTCACATGAACACTGAAAGGCAGTCAGATTCTCTTTCTATTTCAAGAGCCTTCAGCTaGAAGGAAAGCAGCTTTCCT | + |
Preference number: 2 (lower is better) Translates to: LQSHPHMNTERQSDSLSISRAFS*KESSFP Trigger: AGGAAAGCTGCTTTCCTTTCAGCTGAAGGCTCTTGA...AATAGAAAGAGAATCTGACTGCCTTTCAGTGTTCATGTGAGGGTGTGACTGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR-3UTR GCA 90 bp | CAGCACAATCACAACCACAACATTGTAAGTTCCAACAATCACAGCTCCAACGAAACAAAGATGGCCACGTaGGCTAAGGAGAAGATGTAC | + |
Preference number: 2 (lower is better) Translates to: QHNHNHNIVSSNNHSSNETKMAT*AKEKMY Trigger: GTACATCTTCTCCTTAGCGCACGTGGCCATCTTTGT...TTCGTTGGAGCTGTGATTGTTGGAACTTACAATGTTGTGGTTGTGATTGTGCTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | GTGAAGCATCGCCACGAGCAGCTTCGTCAGCACAATCACAACCACAACATTGTATTTATCCTCATGATTTaGTATCAGCTGGAAGCTCTT | + |
Preference number: 2 (lower is better) Translates to: VKHRHEQLRQHNHNHNIVFILMI*YQLEAL Trigger: AAGAGCTTCCAGCTGATAGCAAATCATGAGGATAAA...TACAATGTTGTGGTTGTGATTGTGCTGACGAAGCTGCTCGTGGCGATGCTTCAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR GCA 90 bp | CACGAGCAGCTTCGTCAGCACAATCACAACCACAACATTGTAAGTTCCAACAATAAACTGGCCAGAAGATaGCAACTGTCAAAACAGTCA | + |
Preference number: 2 (lower is better) Translates to: HEQLRQHNHNHNIVSSNNKLARR*QLSKQS Trigger: TGACTGTTTTGACAGTTGGCATCTTCTGGCCAGTTT...ATTGTTGGAACTTACAATGTTGTGGTTGTGATTGTGCTGACGAAGCTGCTCGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR TCA 90 bp | AAACTTCCATTCTTTATCCTCATGATTTGCTATCAGCTGGAAGCTCTTGTGAAGGAACTGCTGGCAATTTaGCTGGGAGACAAACTCCTT | + |
Preference number: 2 (lower is better) Translates to: KLPFFILMICYQLEALVKELLAI*LGDKLL Trigger: AAGGAGTTTGTCTCCCAGTCAAATTGCCAGCAGTTC...CTTCACAAGAGCTTCCAGCTGATAGCAAATCATGAGGATAAAGAATGGAAGTTT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR TCA 90 bp | GTCCTTCTGCTCTTTGGAAGTGTACCCTTTGTCATAGAGCTGAGTCAGTCCAATCAGTCTCTTAATGTCTaGCCAAATCATCCCAATAAT | + |
Preference number: 2 (lower is better) Translates to: VLLLFGSVPFVIELSQSNQSLNV*PNHPNN Trigger: ATTATTGGGATGATTTGGTCAGACATTAAGAGACTG...ATTGGACTGACTCAGCTCTATGACAAAGGGTACACTTCCAAAGAGCAGAAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR TCA 90 bp | CAACCACAACATTGTAAGTTCCAACAATCACAGCTCCAACGAAGGACTGCAGCTGATCGTTTTGGCCGATaGTTAAGTAGTATATCAACA | + |
Preference number: 2 (lower is better) Translates to: QPQHCKFQQSQLQRRTAADRFGR*LSSIST Trigger: TGTTGATATACTACTTAATCATCGGCCAAAACGATC...AGCTGCAGTCCTTCGTTGGAGCTGTGATTGTTGGAACTTACAATGTTGTGGTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190497.2 |
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3UTR-3UTR GCA 90 bp | GCTACTGATCATATAGCAGATCGTCTTTGGAGAAGGAATAATGTTGAAAGGTGGTGTCCCATTGAAATCTaGAGTGGGCCCAAAATAGAG | + |
Preference number: 2 (lower is better) Translates to: ATDHIADRLWRRNNVERWCPIEI*SGPKIE Trigger: CTCTATTTTGGGCCCACTGCAGATTTCAATGGGACA...CCACCTTTCAACATTATTCCTTCTCCAAAGACGATCTGCTATATGATCAGTAGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | ACAGTCCTTCTGCTCTTTGGAAGTGTACCCTTTGTCATAGAGCTGAGTCAGTCCTGCCAAATTGAGATTTaGGAGCTATCAAATAGCATA | + |
Preference number: 2 (lower is better) Translates to: TVLLLFGSVPFVIELSQSCQIEI*ELSNSI Trigger: TATGCTATTTGATAGCTCCCAAATCTCAATTTGGCA...GGACTGACTCAGCTCTATGACAAAGGGTACACTTCCAAAGAGCAGAAGGACTGT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CCA 90 bp | TTTGTCATAGAGCTGAGTCAGTCCAATCGTGAAGGAAAACAGAACAAGGAGGAAAGTCCTTCTGCTCTTTaGAAGTGTACCCTTTGTCAT | + |
Preference number: 2 (lower is better) Translates to: FVIELSQSNREGKQNKEESPSAL*KCTLCH Trigger: ATGACAAAGGGTACACTTCCAAAGAGCAGAAGGACT...TTCCTCCTTGTTCTGTTTTCCTTCACGATTGGACTGACTCAGCTCTATGACAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR CAA 90 bp | AGTTTCAGACGACTTAAGTTCATTCTTTCTTCTAGTAGTCCTCGTTaGTCAAGAGGCTCATCGCTAGATGTATGGTTCAGGATAACTTCC | + |
Preference number: 2 (lower is better) Translates to: SFRRLKFILSSSSPR*SRGSSLDVWFRITS Trigger: GGAAGTTATCCTGAACCATACATCTAGCGATGAGCCTCTTGACAAACGAGGACTACTAGAAGAAAGAATGAACTTAAGTCGTCTGAAACT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR TCA 90 bp | AAACTTCCATTCTTTATCCTCATGATTTGCTATCAGCTGGAAGCTCTTGTGAAGCAGTCTCTTAATGTCTaGCCAAATCATCCCAATAAT | + |
Preference number: 2 (lower is better) Translates to: KLPFFILMICYQLEALVKQSLNV*PNHPNN Trigger: ATTATTGGGATGATTTGGTCAGACATTAAGAGACTG...CTTCACAAGAGCTTCCAGCTGATAGCAAATCATGAGGATAAAGAATGGAAGTTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR GCA 72 bp | CCCCAGGGTAGGTGGTGCTCACAGACCAGGGCTGTCTaGACTCTGGCCTCAATGCCGGCTCACATTCACCAA | + |
Preference number: 3 (lower is better) Translates to: PQGRWCSQTRAV*TLASMPAHIHQ Trigger: TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGAGCACCACCTACCCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR CCA 72 bp | CGGTGGCCTGGTCTGTGCTCTGCATCTTCTGTCGCATaGACGTCAGGTAGCGGTGCACCAGGCAGCACATCA | + |
Preference number: 3 (lower is better) Translates to: RWPGLCSASSVA*TSGSGAPGSTS Trigger: TGATGTGCTGCCTGGTGCACCGCTACCTGACGTCCATGCGACAGAAGATGCAGAGCACAGACCAGGCCACCG 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR CCA 72 bp | TCTTGGCGCAGTTCATTGAGGTTCTCCACGGTGGCCTaGTCTGTGCTCTGCATCTTCTGTCGCATGGACGTC | + |
Preference number: 3 (lower is better) Translates to: SWRSSLRFSTVA*SVLCIFCRMDV Trigger: GACGTCCATGCGACAGAAGATGCAGAGCACAGACCAGGCCACCGTGGAGAACCTCAATGAACTGCGCCAAGA 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CAA 90 bp | GGCCTGGTCTGTGCTCTGCATCTTCTGTCGCATGGACGTCAGGTAGCGGTGCACTCTAGTAGTCCTCGTTaGTCAAGAGGCTCATCGCTA | + |
Preference number: 3 (lower is better) Translates to: GLVCALHLLSHGRQVAVHSSSPR*SRGSSL Trigger: TAGCGATGAGCCTCTTGACAAACGAGGACTACTAGA...GTGCACCGCTACCTGACGTCCATGCGACAGAAGATGCAGAGCACAGACCAGGCC 56% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CAA 90 bp | TTCTCCACGGTGGCCTGGTCTGTGCTCTGCATCTTCTGTCGCATGGACGTCAGGGGAACTGCTGGCAATTaGACTGGGAGACAAACTCCT | + |
Preference number: 3 (lower is better) Translates to: FSTVAWSVLCIFCRMDVRGTAGN*TGRQTP Trigger: AGGAGTTTGTCTCCCAGTCAAATTGCCAGCAGTTCC...CCTGACGTCCATGCGACAGAAGATGCAGAGCACAGACCAGGCCACCGTGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CAA 90 bp | TTCTCCACGGTGGCCTGGTCTGTGCTCTGCATCTTCTGTCGCATGGACGTCAGGGTAACATCTGTCCCATaGAAATCTGCAGTGGGCCCA | + |
Preference number: 3 (lower is better) Translates to: FSTVAWSVLCIFCRMDVRVTSVP*KSAVGP Trigger: TGGGCCCACTGCAGATTTCAATGGGACAGATGTTAC...CCTGACGTCCATGCGACAGAAGATGCAGAGCACAGACCAGGCCACCGTGGAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CAA 90 bp | CATCTTCTGTCGCATGGACGTCAGGTAGCGGTGCACCAGGCAGCACATCACCTTGAGTGGAAGGTGTCATaGCTTTGCTGTTCGCAGAAG | + |
Preference number: 3 (lower is better) Translates to: HLLSHGRQVAVHQAAHHLEWKVS*LCCSQK Trigger: CTTCTGCGAACAGCAAAGCAATGACACCTTCCACTC...AAGGTGATGTGCTGCCTGGTGCACCGCTACCTGACGTCCATGCGACAGAAGATG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CAA 90 bp | CAGCTGGAAGCTCTTGTGAAGCATCGCCACGAGCAGCTTCGTCAGCACAATCACGGAACTGCTGGCAATTaGACTGGGAGACAAACTCCT | + |
Preference number: 3 (lower is better) Translates to: QLEALVKHRHEQLRQHNHGTAGN*TGRQTP Trigger: AGGAGTTTGTCTCCCAGTCAAATTGCCAGCAGTTCC...GTGATTGTGCTGACGAAGCTGCTCGTGGCGATGCTTCACAAGAGCTTCCAGCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CAA 90 bp | CAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAAGCGCTCTTTCTGAGGAAAACACTTaGCAAGAGTTGCTCAAGAGC | + |
Preference number: 3 (lower is better) Translates to: QGCLHSGLNAGSHSPSALSEENT*QELLKS Trigger: GCTCTTGAGCAACTCTTGCAAAGTGTTTTCCTCAGA...AAGAGCGCTTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR GCA 72 bp | CAGGTGCCAATGAACGAGTGGAAGGTGTCATTGCTTTaGTGTTCGCAGAAGATGCCCACACAGTCCTTCTGC | + |
Preference number: 3 (lower is better) Translates to: QVPMNEWKVSLL*CSQKMPTQSFC Trigger: GCAGAAGGACTGTGTGGGCATCTTCTGCGAACAGCAAAGCAATGACACCTTCCACTCGTTCATTGGCACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR CCA 72 bp | CGTTTGCAAAAGCAAAAAGCCCTTCTGCTACAAGCGTaGGGTGGAATGCATCCCAGTCCTTCCGGTCAGCAA | + |
Preference number: 3 (lower is better) Translates to: RLQKQKALLLQA*GGMHPSPSGQQ Trigger: TTGCTGACCGGAAGGACTGGGATGCATTCCACCCCACGCTTGTAGCAGAAGGGCTTTTTGCTTTTGCAAACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
||
3UTR-3UTR CAA 90 bp | CCCTTTGTCATAGAGCTGAGTCAGTCCAATCGTGAAGGAAAACAGAACAAGGAGCCAACAGCATGGGGCTaGGGCAAAGACACATCCTGC | + |
Preference number: 3 (lower is better) Translates to: PFVIELSQSNREGKQNKEPTAWG*GKDTSC Trigger: GCAGGATGTGTCTTTGCCCAAGCCCCATGCTGTTGG...CTCCTTGTTCTGTTTTCCTTCACGATTGGACTGACTCAGCTCTATGACAAAGGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
||
3UTR TCA 72 bp | CATTTCGGAATTTTGACAGATCTTGGCGCAGTTCATTaGGGTTCTCCACGGTGGCCTGGTCTGTGCTCTGCA | + |
Preference number: 3 (lower is better) Translates to: HFGILTDLGAVH*GSPRWPGLCSA Trigger: TGCAGAGCACAGACCAGGCCACCGTGGAGAACCTCAATGAACTGCGCCAAGATCTGTCAAAATTCCGAAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
||
3UTR GCA 72 bp | AGCAAAAAGCCCTTCTGCTACAAGCGTGGGGTGGAATaGATCCCAGTCCTTCCGGTCAGCAAAGTCATGAAA | + |
Preference number: 3 (lower is better) Translates to: SKKPFCYKRGVE*IPVLPVSKVMK Trigger: TTTCATGACTTTGCTGACCGGAAGGACTGGGATGCATTCCACCCCACGCTTGTAGCAGAAGGGCTTTTTGCT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
||
3UTR GCA 72 bp | GGCTCACATTCACCAAGCGCTCTTCAAGAATGTTCATaGGACAGCTGGGAAACCTTCAGTCACACCCTCACA | + |
Preference number: 3 (lower is better) Translates to: GSHSPSALQECS*DSWETFSHTLT Trigger: TGTGAGGGTGTGACTGAAGGTTTCCCAGCTGTCGCATGAACATTCTTGAAGAGCGCTTGGTGAATGTGAGCC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
||
3UTR-3UTR CAA 90 bp | TGTCATTGCTTTGCTGTTCGCAGAAGATGCCCACACAGTCCTTCTGCTCTTTGGGTAACATCTGTCCCATaGAAATCTGCAGTGGGCCCA | + |
Preference number: 3 (lower is better) Translates to: CHCFAVRRRCPHSPSALWVTSVP*KSAVGP Trigger: TGGGCCCACTGCAGATTTCAATGGGACAGATGTTAC...CCAAAGAGCAGAAGGACTGTGTGGGCATCTTCTGCGAACAGCAAAGCAATGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
||
3UTR GCA 72 bp | CCTGACATCTGTCCAAACCAAACCGTGTTCAGGAACTaGTGGCAATTTGACTGGGAGACAAACTCCTTCTGG | + |
Preference number: 3 (lower is better) Translates to: PDICPNQTVFRN*WQFDWETNSFW Trigger: CCAGAAGGAGTTTGTCTCCCAGTCAAATTGCCAGCAGTTCCTGAACACGGTTTGGTTTGGACAGATGTCAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
||
3UTR GCA 72 bp | AGTGGAAGGTGTCATTGCTTTGCTGTTCGCAGAAGATaGCCACACAGTCCTTCTGCTCTTTGGAAGTGTACC | + |
Preference number: 3 (lower is better) Translates to: SGRCHCFAVRRR*PHSPSALWKCT Trigger: GGTACACTTCCAAAGAGCAGAAGGACTGTGTGGGCATCTTCTGCGAACAGCAAAGCAATGACACCTTCCACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
||
3UTR-3UTR CAA 90 bp | ATCTGTCCAAACCAAACCGTGTTCAGGAACTGCTGGCAATTTGACTGGGAGACAACGAGAATTCCGGGCTaGTGCGAGCAAATCTTTAGC | + |
Preference number: 3 (lower is better) Translates to: ICPNQTVFRNCWQFDWETTRIPG*CEQIFS Trigger: GCTAAAGATTTGCTCGCACAAGCCCGGAATTCTCGT...TGTCTCCCAGTCAAATTGCCAGCAGTTCCTGAACACGGTTTGGTTTGGACAGAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
||
3UTR-3UTR CAA 90 bp | TGTCATTGCTTTGCTGTTCGCAGAAGATGCCCACACAGTCCTTCTGCTCTTTGGTCTAGTAGTCCTCGTTaGTCAAGAGGCTCATCGCTA | + |
Preference number: 3 (lower is better) Translates to: CHCFAVRRRCPHSPSALWSSSPR*SRGSSL Trigger: TAGCGATGAGCCTCTTGACAAACGAGGACTACTAGA...CCAAAGAGCAGAAGGACTGTGTGGGCATCTTCTGCGAACAGCAAAGCAATGACA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
||
3UTR-3UTR CAA 90 bp | AGCAAAGCAGGTGCCAATGAACGAGTGGAAGGTGTCATTGCTTTGCTGTTCGCACAGTCCTTCTGCTCTTaGGAAGTGTACCCTTTGTCA | + |
Preference number: 3 (lower is better) Translates to: SKAGANERVEGVIALLFAQSFCS*EVYPLS Trigger: TGACAAAGGGTACACTTCCAAAGAGCAGAAGGACTG...TGCGAACAGCAAAGCAATGACACCTTCCACTCGTTCATTGGCACCTGCTTTGCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
||
3UTR TCA 72 bp | CATTATCTTCTTACAGGTGGGCTTACGGCGGTAACCTaGCATCTGTCCAAACCAAACCGTGTTCAGGAACTG | + |
Preference number: 3 (lower is better) Translates to: HYLLTGGLTAVT*HLSKPNRVQEL Trigger: CAGTTCCTGAACACGGTTTGGTTTGGACAGATGTCAGGTTACCGCCGTAAGCCCACCTGTAAGAAGATAATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
||
3UTR-3UTR CAA 90 bp | CGGAATTTTGACAGATCTTGGCGCAGTTCATTGAGGTTCTCCACGGTGGCCTGGTTTCATTTCGGAATTTaGACAGATCTTGGCGCAGTT | + |
Preference number: 3 (lower is better) Translates to: RNFDRSWRSSLRFSTVAWFHFGI*TDLGAV Trigger: AACTGCGCCAAGATCTGTCAAAATTCCGAAATGAAA...CCAGGCCACCGTGGAGAACCTCAATGAACTGCGCCAAGATCTGTCAAAATTCCG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CAA 90 bp | TCTATAGATATCAAGACGAAACCTGGAATGTCTGAGGCTGTCCTTCTTGTTTTTCCAACAGCATGGGGCTaGGGCAAAGACACATCCTGC | + |
Preference number: 3 (lower is better) Translates to: SIDIKTKPGMSEAVLLVFPTAWG*GKDTSC Trigger: GCAGGATGTGTCTTTGCCCAAGCCCCATGCTGTTGG...AAAAACAAGAAGGACAGCCTCAGACATTCCAGGTTTCGTCTTGATATCTATAGA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
||
3UTR-3UTR CAA 90 bp | CATCGCCACGAGCAGCTTCGTCAGCACAATCACAACCACAACATTGTAAGTTCCCAAACGCTCTCAGAATaGGATCTTCCTCTGTTAACA | + |
Preference number: 3 (lower is better) Translates to: HRHEQLRQHNHNHNIVSSQTLSE*DLPLLT Trigger: TGTTAACAGAGGAAGATCCAATTCTGAGAGCGTTTG...GGAACTTACAATGTTGTGGTTGTGATTGTGCTGACGAAGCTGCTCGTGGCGATG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CAA 90 bp | GCTCTTGTGAAGCATCGCCACGAGCAGCTTCGTCAGCACAATCACAACCACAACTCCTTCTGGTTATATTaGATAGCAAGTTTCAGACGA | + |
Preference number: 3 (lower is better) Translates to: ALVKHRHEQLRQHNHNHNSFWLY*IASFRR Trigger: TCGTCTGAAACTTGCTATCAAATATAACCAGAAGGA...GTTGTGGTTGTGATTGTGCTGACGAAGCTGCTCGTGGCGATGCTTCACAAGAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
||
3UTR CCA 72 bp | AGTCCTCGTTTGTCAAGAGGCTCATCGCTAGATGTATaGTTCAGGATAACTTCCAGTTCACGAGAATTCCGG | + |
Preference number: 3 (lower is better) Translates to: SPRLSRGSSLDV*FRITSSSREFR Trigger: CCGGAATTCTCGTGAACTGGAAGTTATCCTGAACCATACATCTAGCGATGAGCCTCTTGACAAACGAGGACT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR CCA 72 bp | GACATCTGTCCAAACCAAACCGTGTTCAGGAACTGCTaGCAATTTGACTGGGAGACAAACTCCTTCTGGTTA | + |
Preference number: 3 (lower is better) Translates to: DICPNQTVFRNC*QFDWETNSFWL Trigger: TAACCAGAAGGAGTTTGTCTCCCAGTCAAATTGCCAGCAGTTCCTGAACACGGTTTGGTTTGGACAGATGTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR CCA 72 bp | TGCCAACTGTCAAAACAGTCATTATCTTCTTACAGGTaGGCTTACGGCGGTAACCTGACATCTGTCCAAACC | + |
Preference number: 3 (lower is better) Translates to: CQLSKQSLSSYR*AYGGNLTSVQT Trigger: GGTTTGGACAGATGTCAGGTTACCGCCGTAAGCCCACCTGTAAGAAGATAATGACTGTTTTGACAGTTGGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CAA 90 bp | ACTGTTTTGACGTTTGACCTTGCCTTTCGAGGTATGCGAGCAAATCCATTTACTGAAGGTGTCATTGCTTaGCTGTTCGCAGAAGATGCC | + |
Preference number: 3 (lower is better) Translates to: TVLTFDLAFRGMRANPFTEGVIA*LFAEDA Trigger: GGCATCTTCTGCGAACAGCAAAGCAATGACACCTTC...AGTAAATGGATTTGCTCGCATACCTCGAAAGGCAAGGTCAAACGTCAAAACAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR TCA 72 bp | TGCGACAGCTGGGAAACCTTCAGTCACACCCTCACATaGACACTGAAAGGCAGTCAGATTCTCTTTCTATTT | + |
Preference number: 3 (lower is better) Translates to: CDSWETFSHTLT*TLKGSQILFLF Trigger: AAATAGAAAGAGAATCTGACTGCCTTTCAGTGTTCATGTGAGGGTGTGACTGAAGGTTTCCCAGCTGTCGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
||
3UTR GCA 72 bp | CAGGATAACTTCCAGTTCACGAGAATTCCGGGCTTGTaGGAGCAAATCTTTAGCAAACATTTTGCACTGACG | + |
Preference number: 3 (lower is better) Translates to: QDNFQFTRIPGL*EQIFSKHFALT Trigger: CGTCAGTGCAAAATGTTTGCTAAAGATTTGCTCGCACAAGCCCGGAATTCTCGTGAACTGGAAGTTATCCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
||
3UTR GCA 72 bp | TGCTCGAGCAAACTTCCATTCTTTATCCTCATGATTTaGTATCAGCTGGAAGCTCTTGTGAAGCATCGCCAC | + |
Preference number: 3 (lower is better) Translates to: CSSKLPFFILMI*YQLEALVKHRH Trigger: GTGGCGATGCTTCACAAGAGCTTCCAGCTGATAGCAAATCATGAGGATAAAGAATGGAAGTTTGCTCGAGCA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR TCA 72 bp | TGTACCCTTTGTCATAGAGCTGAGTCAGTCCAATCGTaGAGGAAAACAGAACAAGGAGGAACATTCCCAGAA | + |
Preference number: 3 (lower is better) Translates to: CTLCHRAESVQS*RKTEQGGTFPE Trigger: TTCTGGGAATGTTCCTCCTTGTTCTGTTTTCCTTCACGATTGGACTGACTCAGCTCTATGACAAAGGGTACA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR TCA 72 bp | GCTGGGAAACCTTCAGTCACACCCTCACATGAACACTaGAAGGCAGTCAGATTCTCTTTCTATTTCAAATGG | + |
Preference number: 3 (lower is better) Translates to: AGKPSVTPSHEH*KAVRFSFYFKW Trigger: CCATTTGAAATAGAAAGAGAATCTGACTGCCTTTCAGTGTTCATGTGAGGGTGTGACTGAAGGTTTCCCAGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR GCA 72 bp | AAACTTGTTGTGAGCCACCACTTTGAGGGCAAAGGTTaGCAAGTAAAGGGAATTCATAACAAAGCTGAGCTG | + |
Preference number: 3 (lower is better) Translates to: KLVVSHHFEGKG*QVKGIHNKAEL Trigger: CAGCTCAGCTTTGTTATGAATTCCCTTTACTTGGCAACCTTTGCCCTCAAAGTGGTGGCTCACAACAAGTTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR GCA 72 bp | CCTGCCTCTGCCTCCTGTATGCTGGCATTAAAGGCGTaGATTACCATGACTGGCTTAAATTCAAATATTTAC | + |
Preference number: 3 (lower is better) Translates to: PASASCMLALKA*ITMTGLNSNIY Trigger: GTAAATATTTGAATTTAAGCCAGTCATGGTAATGCACGCCTTTAATGCCAGCATACAGGAGGCAGAGGCAGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR-3UTR CAA 90 bp | CCACACAGTCCTTCTGCTCTTTGGAAGTGTACCCTTTGTCATAGAGCTGAGTCATCCTTCTGGTTATATTaGATAGCAAGTTTCAGACGA | + |
Preference number: 3 (lower is better) Translates to: PHSPSALWKCTLCHRAESSFWLY*IASFRR Trigger: TCGTCTGAAACTTGCTATCAAATATAACCAGAAGGA...TGACTCAGCTCTATGACAAAGGGTACACTTCCAAAGAGCAGAAGGACTGTGTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CAA 90 bp | GTCCTTCTGCTCTTTGGAAGTGTACCCTTTGTCATAGAGCTGAGTCAGTCCAATCGACATCCATCGTTGTaGAATATTCTGGATTCTGAA | + |
Preference number: 3 (lower is better) Translates to: VLLLFGSVPFVIELSQSNRHPSL*NILDSE Trigger: TTCAGAATCCAGAATATTCAACAACGATGGATGTCG...ATTGGACTGACTCAGCTCTATGACAAAGGGTACACTTCCAAAGAGCAGAAGGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190497.2 |
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3UTR TCA 72 bp | TCCAAACCAAACCGTGTTCAGGAACTGCTGGCAATTTaGCTGGGAGACAAACTCCTTCTGGTTATATTTGAT | + |
Preference number: 3 (lower is better) Translates to: SKPNRVQELLAI*LGDKLLLVIFD Trigger: ATCAAATATAACCAGAAGGAGTTTGTCTCCCAGTCAAATTGCCAGCAGTTCCTGAACACGGTTTGGTTTGGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR CCA 72 bp | AACCAAACCGTGTTCAGGAACTGCTGGCAATTTGACTaGGAGACAAACTCCTTCTGGTTATATTTGATAGCA | + |
Preference number: 3 (lower is better) Translates to: NQTVFRNCWQFD*ETNSFWLYLIA Trigger: TGCTATCAAATATAACCAGAAGGAGTTTGTCTCCCAGTCAAATTGCCAGCAGTTCCTGAACACGGTTTGGTT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CAA 90 bp | TGCTCGAGCAAACTTCCATTCTTTATCCTCATGATTTGCTATCAGCTGGAAGCTCAAACGCTCTCAGAATaGGATCTTCCTCTGTTAACA | + |
Preference number: 3 (lower is better) Translates to: CSSKLPFFILMICYQLEAQTLSE*DLPLLT Trigger: TGTTAACAGAGGAAGATCCAATTCTGAGAGCGTTTG...AGCTTCCAGCTGATAGCAAATCATGAGGATAAAGAATGGAAGTTTGCTCGAGCA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CAA 90 bp | GTCCTTCTGCTCTTTGGAAGTGTACCCTTTGTCATAGAGCTGAGTCAGTCCAATAATGATTCTGCCAAATaGAGATTTGGGAGCTATCAA | + |
Preference number: 3 (lower is better) Translates to: VLLLFGSVPFVIELSQSNNDSAK*RFGSYQ Trigger: TTGATAGCTCCCAAATCTCAATTTGGCAGAATCATT...ATTGGACTGACTCAGCTCTATGACAAAGGGTACACTTCCAAAGAGCAGAAGGAC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CAA 90 bp | TGCTCGAGCAAACTTCCATTCTTTATCCTCATGATTTGCTATCAGCTGGAAGCTTTACAATGGTTGGTCTaGATGATCGTTTTGGCCGAT | + |
Preference number: 3 (lower is better) Translates to: CSSKLPFFILMICYQLEALQWLV*MIVLAD Trigger: ATCGGCCAAAACGATCATCAAGACCAACCATTGTAA...AGCTTCCAGCTGATAGCAAATCATGAGGATAAAGAATGGAAGTTTGCTCGAGCA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190497.2 |
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3UTR TCA 72 bp | AAAGCCAAGCAAATCCCTTATTTCATTTCGGAATTTTaGCAGATCTTGGCGCAGTTCATTGAGGTTCTCCAC | + |
Preference number: 3 (lower is better) Translates to: KAKQIPYFISEF*QILAQFIEVLH Trigger: GTGGAGAACCTCAATGAACTGCGCCAAGATCTGTCAAAATTCCGAAATGAAATAAGGGATTTGCTTGGCTTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR-3UTR CAA 90 bp | TCTTGTAACATCTGTCCCATTGAAATCTGCAGTGGGCCCAAAATAGAGCTGGTTAATGATTCTGCCAAATaGAGATTTGGGAGCTATCAA | + |
Preference number: 3 (lower is better) Translates to: SCNICPIEICSGPKIELVNDSAK*RFGSYQ Trigger: TTGATAGCTCCCAAATCTCAATTTGGCAGAATCATT...AACCAGCTCTATTTTGGGCCCACTGCAGATTTCAATGGGACAGATGTTACAAGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR TCA 72 bp | GAAACTATACTCCTAAGCAATATACTGAACTCTGTGTaGACTCCTAAAACAAGAGATTTAAACACCATGAGC | + |
Preference number: 3 (lower is better) Translates to: ETILLSNILNSV*TPKTRDLNTMS Trigger: GCTCATGGTGTTTAAATCTCTTGTTTTAGGAGTTCACACAGAGTTCAGTATATTGCTTAGGAGTATAGTTTC 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR CCA 72 bp | CTGTATGCTGGCATTAAAGGCGTGCATTACCATGACTaGCTTAAATTCAAATATTTACTAGAACTTTTCTCT | + |
Preference number: 3 (lower is better) Translates to: LYAGIKGVHYHD*LKFKYLLELFS Trigger: AGAGAAAAGTTCTAGTAAATATTTGAATTTAAGCCAGTCATGGTAATGCACGCCTTTAATGCCAGCATACAG 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | TCACAGACCAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAACGCCCGAGAGGTCCGTaGTCGGGTACAGGGCCGCCA | + |
Preference number: 4 (lower is better) Translates to: SQTRAVCTLASMPAHIHQRPRGP*SGTGPP Trigger: TGGCGGCCCTGTACCCGAGCACGGACCTCTCGGGCG...TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | CTACAAGCGTGGGGTGGAATGCATCCCAGTCCTTCCGGTCAGCAAAGTCATGAACGCCCGAGAGGTCCGTaGTCGGGTACAGGGCCGCCA | + |
Preference number: 4 (lower is better) Translates to: LQAWGGMHPSPSGQQSHERPRGP*SGTGPP Trigger: TGGCGGCCCTGTACCCGAGCACGGACCTCTCGGGCG...TTCATGACTTTGCTGACCGGAAGGACTGGGATGCATTCCACCCCACGCTTGTAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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CDS-3UTR GCA 90 bp | CTTCAGCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGCGGTGGCCTGGTCTGTaGTCTGCATCTTCTGTCGCA | + |
Preference number: 4 (lower is better) Translates to: LQLKGKQLSSGLQASPAKRWPGL*SASSVA Trigger: TGCGACAGAAGATGCAGAGCACAGACCAGGCCACCG...CTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGCTGAAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | GCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGCCCACACCGTGTTCAGGAACTaGTGGCAATTTGACTGGGAG | + |
Preference number: 4 (lower is better) Translates to: AERKAAFLRAPGLSSQAHTVFRN*WQFDWE Trigger: CTCCCAGTCAAATTGCCAGCAGTTCCTGAACACGGT...GTGGGCTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | GCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGCCCACCCCACACAGTCCTTCTaGTCTTTGGAAGTGTACCCT | + |
Preference number: 4 (lower is better) Translates to: AERKAAFLRAPGLSSQAHPTQSF*SLEVYP Trigger: AGGGTACACTTCCAAAGAGCAGAAGGACTGTGTGGG...GTGGGCTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | GCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGCCCACGATTGCCACCAAAAGTaGATCTGCGGACTGACAACC | + |
Preference number: 4 (lower is better) Translates to: AERKAAFLRAPGLSSQAHDCHQK*ICGLTT Trigger: GGTTGTCAGTCCGCAGATGCACTTTTGGTGGCAATC...GTGGGCTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | TCACAGACCAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAAGCATCTTCTGTCGCATaGACGTCAGGTAGCGGTGCA | + |
Preference number: 4 (lower is better) Translates to: SQTRAVCTLASMPAHIHQASSVA*TSGSGA Trigger: TGCACCGCTACCTGACGTCCATGCGACAGAAGATGC...TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | TCACAGACCAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAATTCTCCACGGTGGCCTaGTCTGTGCTCTGCATCTTC | + |
Preference number: 4 (lower is better) Translates to: SQTRAVCTLASMPAHIHQFSTVA*SVLCIF Trigger: GAAGATGCAGAGCACAGACCAGGCCACCGTGGAGAA...TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR TCA 90 bp | TCACAGACCAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAATGTGAGCCACCACTTTaGGGGCAAAGGTTGCCAAGT | + |
Preference number: 4 (lower is better) Translates to: SQTRAVCTLASMPAHIHQCEPPL*GQRLPS Trigger: ACTTGGCAACCTTTGCCCTCAAAGTGGTGGCTCACA...TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | TCACAGACCAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAATCACAGCCAACAGCATaGGGCTTGGGCAAAGACACA | + |
Preference number: 4 (lower is better) Translates to: SQTRAVCTLASMPAHIHQSQPTA*GLGKDT Trigger: TGTGTCTTTGCCCAAGCCCCATGCTGTTGGCTGTGA...TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR TCA 90 bp | CAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAAGCGCTCTTGAACTGCTGGCAATTTaGCTGGGAGACAAACTCCTT | + |
Preference number: 4 (lower is better) Translates to: QGCLHSGLNAGSHSPSALELLAI*LGDKLL Trigger: AAGGAGTTTGTCTCCCAGTCAAATTGCCAGCAGTTC...AAGAGCGCTTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | TTTGTCATAGAGCTGAGTCAGTCCAATCGTGAAGGAAAACAGAACAAGGAGGAACGCCCGAGAGGTCCGTaGTCGGGTACAGGGCCGCCA | + |
Preference number: 4 (lower is better) Translates to: FVIELSQSNREGKQNKEERPRGP*SGTGPP Trigger: TGGCGGCCCTGTACCCGAGCACGGACCTCTCGGGCG...TTCCTCCTTGTTCTGTTTTCCTTCACGATTGGACTGACTCAGCTCTATGACAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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CDS-3UTR TCA 90 bp | CAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAAGCGCTCTTGAGTCAGTCCAATCGTaGAGGAAAACAGAACAAGGA | + |
Preference number: 4 (lower is better) Translates to: QGCLHSGLNAGSHSPSALESVQS*RKTEQG Trigger: TCCTTGTTCTGTTTTCCTTCACGATTGGACTGACTC...AAGAGCGCTTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | TCACAGACCAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAAAAGGTGTCATTGCTTTaGTGTTCGCAGAAGATGCCC | + |
Preference number: 4 (lower is better) Translates to: SQTRAVCTLASMPAHIHQKVSLL*CSQKMP Trigger: GGGCATCTTCTGCGAACAGCAAAGCAATGACACCTT...TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | GCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGCCCACTTCTCGTCTCTCTTTTaGTTCAAGTTTCTCCACTCC | + |
Preference number: 4 (lower is better) Translates to: AERKAAFLRAPGLSSQAHFSSLF*FKFLHS Trigger: GGAGTGGAGAAACTTGAAGCAAAAGAGAGACGAGAA...GTGGGCTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | TCACAGACCAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAATGCTGGCAATTTGACTaGGAGACAAACTCCTTCTGG | + |
Preference number: 4 (lower is better) Translates to: SQTRAVCTLASMPAHIHQCWQFD*ETNSFW Trigger: CCAGAAGGAGTTTGTCTCCCAGTCAAATTGCCAGCA...TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR CAA 72 bp | GCAGGTGCCAATGAACGAGTGGAAGGTGTCATTGCTTaGCTGTTCGCAGAAGATGCCCACACAGTCCTTCTG | + |
Preference number: 4 (lower is better) Translates to: AGANERVEGVIA*LFAEDAHTVLL Trigger: CAGAAGGACTGTGTGGGCATCTTCTGCGAACAGCAAAGCAATGACACCTTCCACTCGTTCATTGGCACCTGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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CDS-3UTR TCA 90 bp | GCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGCCCACTCCTTTAAACTGTTTTaGCGTTTGACCTTGCCTTTC | + |
Preference number: 4 (lower is better) Translates to: AERKAAFLRAPGLSSQAHSFKLF*RLTLPF Trigger: GAAAGGCAAGGTCAAACGTCAAAACAGTTTAAAGGA...GTGGGCTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | CTTCAGCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGTGTCCCATTGAAATCTaGAGTGGGCCCAAAATAGAG | + |
Preference number: 4 (lower is better) Translates to: LQLKGKQLSSGLQASPAKCPIEI*SGPKIE Trigger: CTCTATTTTGGGCCCACTGCAGATTTCAATGGGACA...CTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGCTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | CTTCAGCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGTACTTCAGAGTCGATTaGCACCAAAAGTGCATCTGC | + |
Preference number: 4 (lower is better) Translates to: LQLKGKQLSSGLQASPAKYFRVD*HQKCIC Trigger: GCAGATGCACTTTTGGTGGCAATCGACTCTGAAGTA...CTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGCTGAAG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | GCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGCCCACTCATCGCTAGATGTATaGTTCAGGATAACTTCCAGT | + |
Preference number: 4 (lower is better) Translates to: AERKAAFLRAPGLSSQAHSSLDV*FRITSS Trigger: ACTGGAAGTTATCCTGAACCATACATCTAGCGATGA...GTGGGCTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR TCA 90 bp | CTTCAGCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGTTCATTTCGGAATTTTaGCAGATCTTGGCGCAGTTC | + |
Preference number: 4 (lower is better) Translates to: LQLKGKQLSSGLQASPAKFISEF*QILAQF Trigger: GAACTGCGCCAAGATCTGTCAAAATTCCGAAATGAA...CTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGCTGAAG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | TCACAGACCAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAAAAACTGGCCAGAAGATaGCAACTGTCAAAACAGTCA | + |
Preference number: 4 (lower is better) Translates to: SQTRAVCTLASMPAHIHQKLARR*QLSKQS Trigger: TGACTGTTTTGACAGTTGGCATCTTCTGGCCAGTTT...TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | GCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGCCCACTTTATCCTCATGATTTaGTATCAGCTGGAAGCTCTT | + |
Preference number: 4 (lower is better) Translates to: AERKAAFLRAPGLSSQAHFILMI*YQLEAL Trigger: AAGAGCTTCCAGCTGATAGCAAATCATGAGGATAAA...GTGGGCTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | TCACAGACCAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAATTGCCTTTCGAGGTATaGGAGCAAATCCATTTACTG | + |
Preference number: 4 (lower is better) Translates to: SQTRAVCTLASMPAHIHQLPFEV*EQIHLL Trigger: CAGTAAATGGATTTGCTCGCATACCTCGAAAGGCAA...TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | CAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAAGCGCTCTTTATTCTCTCCAGGGCTaGTCCCATTGTATTTTTCTT | + |
Preference number: 4 (lower is better) Translates to: QGCLHSGLNAGSHSPSALYSLQG*SHCIFL Trigger: AAGAAAAATACAATGGGACCAGCCCTGGAGAGAATA...AAGAGCGCTTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | TCACAGACCAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAAAGTCCTTCTGCTCTTTaGAAGTGTACCCTTTGTCAT | + |
Preference number: 4 (lower is better) Translates to: SQTRAVCTLASMPAHIHQSPSAL*KCTLCH Trigger: ATGACAAAGGGTACACTTCCAAAGAGCAGAAGGACT...TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR CAA 72 bp | TCATTTCGGAATTTTGACAGATCTTGGCGCAGTTCATaGAGGTTCTCCACGGTGGCCTGGTCTGTGCTCTGC | + |
Preference number: 4 (lower is better) Translates to: SFRNFDRSWRSS*RFSTVAWSVLC Trigger: GCAGAGCACAGACCAGGCCACCGTGGAGAACCTCAATGAACTGCGCCAAGATCTGTCAAAATTCCGAAATGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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CDS-3UTR TCA 90 bp | CAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAAGCGCTCTTATGATTCTGCCAAATTaGGATTTGGGAGCTATCAAA | + |
Preference number: 4 (lower is better) Translates to: QGCLHSGLNAGSHSPSALMILPN*DLGAIK Trigger: TTTGATAGCTCCCAAATCTCAATTTGGCAGAATCAT...AAGAGCGCTTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | TCACAGACCAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAATTTGAGGGCAAAGGTTaGCAAGTAAAGGGAATTCAT | + |
Preference number: 4 (lower is better) Translates to: SQTRAVCTLASMPAHIHQFEGKG*QVKGIH Trigger: ATGAATTCCCTTTACTTGGCAACCTTTGCCCTCAAA...TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | GCCTCCTGTATGCTGGCATTAAAGGCGTGCATTACCATGACTGGCTTAAATTCAGCCTGGTCTGTGCTCTaGATCTTCTGTCGCATGGAC | + |
Preference number: 4 (lower is better) Translates to: ASCMLALKACITMTGLNSAWSVL*IFCRMD Trigger: GTCCATGCGACAGAAGATGCAGAGCACAGACCAGGC...TGAATTTAAGCCAGTCATGGTAATGCACGCCTTTAATGCCAGCATACAGGAGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | GCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGCCCACTGCCAAATTGAGATTTaGGAGCTATCAAATAGCATA | + |
Preference number: 4 (lower is better) Translates to: AERKAAFLRAPGLSSQAHCQIEI*ELSNSI Trigger: TATGCTATTTGATAGCTCCCAAATCTCAATTTGGCA...GTGGGCTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR TCA 90 bp | CCAGCATGTGACCACATGAATGGTGACAAGCAGCTTCAACTTTGTAATGGTGAGCCACCTCCACAAGGCTaGGTTCCTTTAAGTCAGCAC | + |
Preference number: 4 (lower is better) Translates to: PACDHMNGDKQLQLCNGEPPPQG*VPLSQH Trigger: GTGCTGACTTAAAGGAACTCAGCCTTGTGGAGGTGG...CTCACCATTACAAAGTTGAAGCTGCTTGTCACCATTCATGTGGTCACATGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR TCA 90 bp | CTTCAGCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGCAGTCTCTTAATGTCTaGCCAAATCATCCCAATAAT | + |
Preference number: 4 (lower is better) Translates to: LQLKGKQLSSGLQASPAKQSLNV*PNHPNN Trigger: ATTATTGGGATGATTTGGTCAGACATTAAGAGACTG...CTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGCTGAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | GCCTCCTGTATGCTGGCATTAAAGGCGTGCATTACCATGACTGGCTTAAATTCACAACAGCATGGGGCTTaGGCAAAGACACATCCTGCT | + |
Preference number: 4 (lower is better) Translates to: ASCMLALKACITMTGLNSQQHGA*AKTHPA Trigger: AGCAGGATGTGTCTTTGCCCAAGCCCCATGCTGTTG...TGAATTTAAGCCAGTCATGGTAATGCACGCCTTTAATGCCAGCATACAGGAGGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | CCAGCATGTGACCACATGAATGGTGACAAGCAGCTTCAACTTTGTAATGGTGAGCTTCTGCTACAAGCGTaGGGTGGAATGCATCCCAGT | + |
Preference number: 4 (lower is better) Translates to: PACDHMNGDKQLQLCNGELLLQA*GGMHPS Trigger: ACTGGGATGCATTCCACCCCACGCTTGTAGCAGAAG...CTCACCATTACAAAGTTGAAGCTGCTTGTCACCATTCATGTGGTCACATGCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR TCA 90 bp | GCCTCCTGTATGCTGGCATTAAAGGCGTGCATTACCATGACTGGCTTAAATTCACTTACGGCGGTAACCTaGCATCTGTCCAAACCAAAC | + |
Preference number: 4 (lower is better) Translates to: ASCMLALKACITMTGLNSLTAVT*HLSKPN Trigger: GTTTGGTTTGGACAGATGTCAGGTTACCGCCGTAAG...TGAATTTAAGCCAGTCATGGTAATGCACGCCTTTAATGCCAGCATACAGGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | TCTTGTAACATCTGTCCCATTGAAATCTGCAGTGGGCCCAAAATAGAGCTGGTTGATTGCCACCAAAAGTaGATCTGCGGACCTTGTCGC | + |
Preference number: 4 (lower is better) Translates to: SCNICPIEICSGPKIELVDCHQK*ICGPCR Trigger: GCGACAAGGTCCGCAGATGCACTTTTGGTGGCAATC...AACCAGCTCTATTTTGGGCCCACTGCAGATTTCAATGGGACAGATGTTACAAGA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000190497.2 |
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CDS-3UTR GCA 90 bp | GCCTCCTGTATGCTGGCATTAAAGGCGTGCATTACCATGACTGGCTTAAATTCAACAAAGATGGCCACGTaGGCTAAGGAGAAGATGTAC | + |
Preference number: 4 (lower is better) Translates to: ASCMLALKACITMTGLNSTKMAT*AKEKMY Trigger: GTACATCTTCTCCTTAGCGCACGTGGCCATCTTTGT...TGAATTTAAGCCAGTCATGGTAATGCACGCCTTTAATGCCAGCATACAGGAGGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | CCAGCATGTGACCACATGAATGGTGACAAGCAGCTTCAACTTTGTAATGGTGAGTTATCTTCTTACAGGTaGGCTTACGGCGGTAACCTG | + |
Preference number: 4 (lower is better) Translates to: PACDHMNGDKQLQLCNGELSSYR*AYGGNL Trigger: CAGGTTACCGCCGTAAGCCCACCTGTAAGAAGATAA...CTCACCATTACAAAGTTGAAGCTGCTTGTCACCATTCATGTGGTCACATGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | GCCTCCTGTATGCTGGCATTAAAGGCGTGCATTACCATGACTGGCTTAAATTCAAGTGGAAGGTGTCATTaGTTTGCTGTTCGCAGAAGA | + |
Preference number: 4 (lower is better) Translates to: ASCMLALKACITMTGLNSSGRCH*FAVRRR Trigger: TCTTCTGCGAACAGCAAAGCAATGACACCTTCCACT...TGAATTTAAGCCAGTCATGGTAATGCACGCCTTTAATGCCAGCATACAGGAGGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | GCCTCCTGTATGCTGGCATTAAAGGCGTGCATTACCATGACTGGCTTAAATTCAAGAATTCCGGGCTTGTaGGAGCAAATCTTTAGCAAA | + |
Preference number: 4 (lower is better) Translates to: ASCMLALKACITMTGLNSRIPGL*EQIFSK Trigger: TTTGCTAAAGATTTGCTCGCACAAGCCCGGAATTCT...TGAATTTAAGCCAGTCATGGTAATGCACGCCTTTAATGCCAGCATACAGGAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | TTAAACACCATGAGCTCTTCATTTCAAGTGTGTCTTAAGGTAGCTGCATTTGCTGCTGTTCGCAGAAGATaGCCACACAGTCCTTCTGCT | + |
Preference number: 4 (lower is better) Translates to: LNTMSSSFQVCLKVAAFAAVRRR*PHSPSA Trigger: AGCAGAAGGACTGTGTGGGCATCTTCTGCGAACAGC...AGCAAATGCAGCTACCTTAAGACACACTTGAAATGAAGAGCTCATGGTGTTTAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | GCCTCCTGTATGCTGGCATTAAAGGCGTGCATTACCATGACTGGCTTAAATTCAATAACAAAGCTGAGCTaGTTACGCGATTCTTCTAGG | + |
Preference number: 4 (lower is better) Translates to: ASCMLALKACITMTGLNSITKLS*LRDSSR Trigger: CCTAGAAGAATCGCGTAACCAGCTCAGCTTTGTTAT...TGAATTTAAGCCAGTCATGGTAATGCACGCCTTTAATGCCAGCATACAGGAGGC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR CAA 72 bp | GTTCAGGATAACTTCCAGTTCACGAGAATTCCGGGCTaGTGCGAGCAAATCTTTAGCAAACATTTTGCACTG | + |
Preference number: 4 (lower is better) Translates to: VQDNFQFTRIPG*CEQIFSKHFAL Trigger: CAGTGCAAAATGTTTGCTAAAGATTTGCTCGCACAAGCCCGGAATTCTCGTGAACTGGAAGTTATCCTGAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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3UTR CAA 72 bp | TTGCTCGAGCAAACTTCCATTCTTTATCCTCATGATTaGCTATCAGCTGGAAGCTCTTGTGAAGCATCGCCA | + |
Preference number: 4 (lower is better) Translates to: LLEQTSILYPHD*LSAGSSCEASP Trigger: TGGCGATGCTTCACAAGAGCTTCCAGCTGATAGCAAATCATGAGGATAAAGAATGGAAGTTTGCTCGAGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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CDS-3UTR TCA 90 bp | ATCTGTCCAAACCAAACCGTGTTCAGGAACTGCTGGCAATTTGACTGGGAGACAGACATCCATCGTTGTTaGATATTCTGGATTCTGAAT | + |
Preference number: 4 (lower is better) Translates to: ICPNQTVFRNCWQFDWETDIHRC*IFWILN Trigger: ATTCAGAATCCAGAATATTCAACAACGATGGATGTC...TGTCTCCCAGTCAAATTGCCAGCAGTTCCTGAACACGGTTTGGTTTGGACAGAT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190604.7 |
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CDS-3UTR TCA 90 bp | TTAAACACCATGAGCTCTTCATTTCAAGTGTGTCTTAAGGTAGCTGCATTTGCTCAAAGCAGGTGCCAATaGACGAGTGGAAGGTGTCAT | + |
Preference number: 4 (lower is better) Translates to: LNTMSSSFQVCLKVAAFAQSRCQ*TSGRCH Trigger: ATGACACCTTCCACTCGTTCATTGGCACCTGCTTTG...AGCAAATGCAGCTACCTTAAGACACACTTGAAATGAAGAGCTCATGGTGTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR GCA 90 bp | CTTCAGTCACACCCTCACATGAACACTGAAAGGCAGTCAGATTCTCTTTCTATTTTGCAGAACACAGTGTaGATTCACAGCCAACAGCAT | + |
Preference number: 4 (lower is better) Translates to: LQSHPHMNTERQSDSLSILQNTV*IHSQQH Trigger: ATGCTGTTGGCTGTGAATGCACACTGTGTTCTGCAA...AATAGAAAGAGAATCTGACTGCCTTTCAGTGTTCATGTGAGGGTGTGACTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | GCCTCCTGTATGCTGGCATTAAAGGCGTGCATTACCATGACTGGCTTAAATTCAAATTTTGACAGATCTTaGCGCAGTTCATTGAGGTTC | + |
Preference number: 4 (lower is better) Translates to: ASCMLALKACITMTGLNSNFDRS*RSSLRF Trigger: GAACCTCAATGAACTGCGCCAAGATCTGTCAAAATT...TGAATTTAAGCCAGTCATGGTAATGCACGCCTTTAATGCCAGCATACAGGAGGC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR CAA 72 bp | CGACTTAAGTTCATTCTTTCTTCTAGTAGTCCTCGTTaGTCAAGAGGCTCATCGCTAGATGTATGGTTCAGG | + |
Preference number: 4 (lower is better) Translates to: RLKFILSSSSPR*SRGSSLDVWFR Trigger: CCTGAACCATACATCTAGCGATGAGCCTCTTGACAAACGAGGACTACTAGAAGAAAGAATGAACTTAAGTCG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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CDS-3UTR TCA 90 bp | GCCTCCTGTATGCTGGCATTAAAGGCGTGCATTACCATGACTGGCTTAAATTCATATGTTCAAGTCACCTaGACTGTTTTCCTCCAAAAT | + |
Preference number: 4 (lower is better) Translates to: ASCMLALKACITMTGLNSYVQVT*TVFLQN Trigger: ATTTTGGAGGAAAACAGTTCAGGTGACTTGAACATA...TGAATTTAAGCCAGTCATGGTAATGCACGCCTTTAATGCCAGCATACAGGAGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR TCA 90 bp | CCAGCATGTGACCACATGAATGGTGACAAGCAGCTTCAACTTTGTAATGGTGAGGATCGTTTTGGCCGATaGTTAAGTAGTATATCAACA | + |
Preference number: 4 (lower is better) Translates to: PACDHMNGDKQLQLCNGEDRFGR*LSSIST Trigger: TGTTGATATACTACTTAATCATCGGCCAAAACGATC...CTCACCATTACAAAGTTGAAGCTGCTTGTCACCATTCATGTGGTCACATGCTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | TTAAACACCATGAGCTCTTCATTTCAAGTGTGTCTTAAGGTAGCTGCATTTGCTGTGTTCAGGAACTGCTaGCAATTTGACTGGGAGACA | + |
Preference number: 4 (lower is better) Translates to: LNTMSSSFQVCLKVAAFAVFRNC*QFDWET Trigger: TGTCTCCCAGTCAAATTGCCAGCAGTTCCTGAACAC...AGCAAATGCAGCTACCTTAAGACACACTTGAAATGAAGAGCTCATGGTGTTTAA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR TCA 90 bp | CTTCAGTCACACCCTCACATGAACACTGAAAGGCAGTCAGATTCTCTTTCTATTGACATCCATCGTTGTTaGATATTCTGGATTCTGAAT | + |
Preference number: 4 (lower is better) Translates to: LQSHPHMNTERQSDSLSIDIHRC*IFWILN Trigger: ATTCAGAATCCAGAATATTCAACAACGATGGATGTC...AATAGAAAGAGAATCTGACTGCCTTTCAGTGTTCATGTGAGGGTGTGACTGAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | TTAAACACCATGAGCTCTTCATTTCAAGTGTGTCTTAAGGTAGCTGCATTTGCTTTATCAGAGCTGGACTaGCCAGACATCTATAGATAT | + |
Preference number: 4 (lower is better) Translates to: LNTMSSSFQVCLKVAAFALSELD*PDIYRY Trigger: ATATCTATAGATGTCTGGCCAGTCCAGCTCTGATAA...AGCAAATGCAGCTACCTTAAGACACACTTGAAATGAAGAGCTCATGGTGTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CCA 90 bp | TTAAACACCATGAGCTCTTCATTTCAAGTGTGTCTTAAGGTAGCTGCATTTGCTAATAATGTTGAAAGGTaGGGGCAGTGTACATTTGTC | + |
Preference number: 4 (lower is better) Translates to: LNTMSSSFQVCLKVAAFANNVER*GQCTFV Trigger: GACAAATGTACACTGCCCCCACCTTTCAACATTATT...AGCAAATGCAGCTACCTTAAGACACACTTGAAATGAAGAGCTCATGGTGTTTAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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3UTR CAA 72 bp | CAATTTGACTGGGAGACAAACTCCTTCTGGTTATATTaGATAGCAAGTTTCAGACGACTTAAGTTCATTCTT | + |
Preference number: 4 (lower is better) Translates to: QFDWETNSFWLY*IASFRRLKFIL Trigger: AAGAATGAACTTAAGTCGTCTGAAACTTGCTATCAAATATAACCAGAAGGAGTTTGTCTCCCAGTCAAATTG 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000190497.2 ENSMUST00000190604.7 |
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CDS CCA 90 bp | TCGCACATCCTTCAGCGCCATCACTTCGTTGGGCGACGAGGAGGATaGGGAGGAAGGCAGGGAGGAGGAGGAGACGCCCGAGAGGTCCGT | + |
Preference number: 5 (lower is better) Translates to: SHILQRHHFVGRRGG*GGRQGGGGDAREVR Trigger: ACGGACCTCTCGGGCGTCTCCTCCTCCTCCCTGCCTTCCTCCCCATCCTCCTCGTCGCCCAACGAAGTGATGGCGCTGAAGGATGTGCGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053785.10 ENSMUST00000189137.7 ENSMUST00000190497.2 ENSMUST00000190604.7 |
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CDS CCA 90 bp | TCTCCTCCTTCACCTCTCGCACATCCTTCAGCGCCATCACTTCGTTaGGCGACGAGGAGGATGGGGAGGAAGGCAGGGAGGAGGAGGAGA | + |
Preference number: 5 (lower is better) Translates to: SPPSPLAHPSAPSLR*ATRRMGRKAGRRRR Trigger: TCTCCTCCTCCTCCCTGCCTTCCTCCCCATCCTCCTCGTCGCCCAACGAAGTGATGGCGCTGAAGGATGTGCGAGAGGTGAAGGAGGAGA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053785.10 ENSMUST00000189137.7 ENSMUST00000190497.2 ENSMUST00000190604.7 |
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CDS-3UTR CAA 90 bp | GCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGCCCACGGAACTGCTGGCAATTaGACTGGGAGACAAACTCCT | + |
Preference number: 5 (lower is better) Translates to: AERKAAFLRAPGLSSQAHGTAGN*TGRQTP Trigger: AGGAGTTTGTCTCCCAGTCAAATTGCCAGCAGTTCC...GTGGGCTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CAA 90 bp | CTTCAGCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGGAAGGTGTCATTGCTTaGCTGTTCGCAGAAGATGCC | + |
Preference number: 5 (lower is better) Translates to: LQLKGKQLSSGLQASPAKEGVIA*LFAEDA Trigger: GGCATCTTCTGCGAACAGCAAAGCAATGACACCTTC...CTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGCTGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CAA 90 bp | TCACAGACCAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAATCTAGTAGTCCTCGTTaGTCAAGAGGCTCATCGCTA | + |
Preference number: 5 (lower is better) Translates to: SQTRAVCTLASMPAHIHQSSSPR*SRGSSL Trigger: TAGCGATGAGCCTCTTGACAAACGAGGACTACTAGA...TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CAA 90 bp | TCACAGACCAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAACTACTTCAGAGTCGATaGCCACCAAAAGTGCATCTG | + |
Preference number: 5 (lower is better) Translates to: SQTRAVCTLASMPAHIHQLLQSR*PPKVHL Trigger: CAGATGCACTTTTGGTGGCAATCGACTCTGAAGTAG...TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CAA 90 bp | CCAGCATGTGACCACATGAATGGTGACAAGCAGCTTCAACTTTGTAATGGTGAGCCAACAGCATGGGGCTaGGGCAAAGACACATCCTGC | + |
Preference number: 5 (lower is better) Translates to: PACDHMNGDKQLQLCNGEPTAWG*GKDTSC Trigger: GCAGGATGTGTCTTTGCCCAAGCCCCATGCTGTTGG...CTCACCATTACAAAGTTGAAGCTGCTTGTCACCATTCATGTGGTCACATGCTGG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CAA 90 bp | CTTCAGCTGAAAGGAAAGCAGCTTTCCTCAGGGCTCCAGGCCTCTCCAGCCAAGCAAACGCTCTCAGAATaGGATCTTCCTCTGTTAACA | + |
Preference number: 5 (lower is better) Translates to: LQLKGKQLSSGLQASPAKQTLSE*DLPLLT Trigger: TGTTAACAGAGGAAGATCCAATTCTGAGAGCGTTTG...CTTGGCTGGAGAGGCCTGGAGCCCTGAGGAAAGCTGCTTTCCTTTCAGCTGAAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CAA 90 bp | AGTGTACCCTTTGTCATAGAGCTGAGTCAGTCCAATCGTGAAGGAAAACAGAACGTGCATCTGCGGACCTaGTCGCACGCCAGCAAGAAA | + |
Preference number: 5 (lower is better) Translates to: SVPFVIELSQSNREGKQNVHLRT*SHASKK Trigger: TTTCTTGCTGGCGTGCGACAAGGTCCGCAGATGCAC...GTTCTGTTTTCCTTCACGATTGGACTGACTCAGCTCTATGACAAAGGGTACACT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000190497.2 |
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CDS-3UTR CAA 90 bp | TCACAGACCAGGGCTGTCTGCACTCTGGCCTCAATGCCGGCTCACATTCACCAAAATGATTCTGCCAAATaGAGATTTGGGAGCTATCAA | + |
Preference number: 5 (lower is better) Translates to: SQTRAVCTLASMPAHIHQNDSAK*RFGSYQ Trigger: TTGATAGCTCCCAAATCTCAATTTGGCAGAATCATT...TTGGTGAATGTGAGCCGGCATTGAGGCCAGAGTGCAGACAGCCCTGGTCTGTGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CAA 90 bp | GCCTCCTGTATGCTGGCATTAAAGGCGTGCATTACCATGACTGGCTTAAATTCAACGAGAATTCCGGGCTaGTGCGAGCAAATCTTTAGC | + |
Preference number: 5 (lower is better) Translates to: ASCMLALKACITMTGLNSTRIPG*CEQIFS Trigger: GCTAAAGATTTGCTCGCACAAGCCCGGAATTCTCGT...TGAATTTAAGCCAGTCATGGTAATGCACGCCTTTAATGCCAGCATACAGGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CAA 90 bp | GCCTCCTGTATGCTGGCATTAAAGGCGTGCATTACCATGACTGGCTTAAATTCAGTAACATCTGTCCCATaGAAATCTGCAGTGGGCCCA | + |
Preference number: 5 (lower is better) Translates to: ASCMLALKACITMTGLNSVTSVP*KSAVGP Trigger: TGGGCCCACTGCAGATTTCAATGGGACAGATGTTAC...TGAATTTAAGCCAGTCATGGTAATGCACGCCTTTAATGCCAGCATACAGGAGGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CAA 90 bp | CCAGCATGTGACCACATGAATGGTGACAAGCAGCTTCAACTTTGTAATGGTGAGCAGTCCTTCTGCTCTTaGGAAGTGTACCCTTTGTCA | + |
Preference number: 5 (lower is better) Translates to: PACDHMNGDKQLQLCNGEQSFCS*EVYPLS Trigger: TGACAAAGGGTACACTTCCAAAGAGCAGAAGGACTG...CTCACCATTACAAAGTTGAAGCTGCTTGTCACCATTCATGTGGTCACATGCTGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CAA 90 bp | TCATCGCTAGATGTATGGTTCAGGATAACTTCCAGTTCACGAGAATTCCGGGCTCGACATCCATCGTTGTaGAATATTCTGGATTCTGAA | + |
Preference number: 5 (lower is better) Translates to: SSLDVWFRITSSSREFRARHPSL*NILDSE Trigger: TTCAGAATCCAGAATATTCAACAACGATGGATGTCG...AGCCCGGAATTCTCGTGAACTGGAAGTTATCCTGAACCATACATCTAGCGATGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000190604.7 |
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CDS-3UTR CAA 90 bp | TTAAACACCATGAGCTCTTCATTTCAAGTGTGTCTTAAGGTAGCTGCATTTGCTGAGTGGAAGGTGTCATaGCTTTGCTGTTCGCAGAAG | + |
Preference number: 5 (lower is better) Translates to: LNTMSSSFQVCLKVAAFAEWKVS*LCCSQK Trigger: CTTCTGCGAACAGCAAAGCAATGACACCTTCCACTC...AGCAAATGCAGCTACCTTAAGACACACTTGAAATGAAGAGCTCATGGTGTTTAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CAA 90 bp | CTTCAGTCACACCCTCACATGAACACTGAAAGGCAGTCAGATTCTCTTTCTATTGTTCTCGTCTCTCTTTaGCTTCAAGTTTCTCCACTC | + |
Preference number: 5 (lower is better) Translates to: LQSHPHMNTERQSDSLSIVLVSL*LQVSPL Trigger: GAGTGGAGAAACTTGAAGCAAAAGAGAGACGAGAAC...AATAGAAAGAGAATCTGACTGCCTTTCAGTGTTCATGTGAGGGTGTGACTGAAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CAA 90 bp | GCCTCCTGTATGCTGGCATTAAAGGCGTGCATTACCATGACTGGCTTAAATTCATTTCATTTCGGAATTTaGACAGATCTTGGCGCAGTT | + |
Preference number: 5 (lower is better) Translates to: ASCMLALKACITMTGLNSFHFGI*TDLGAV Trigger: AACTGCGCCAAGATCTGTCAAAATTCCGAAATGAAA...TGAATTTAAGCCAGTCATGGTAATGCACGCCTTTAATGCCAGCATACAGGAGGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CAA 90 bp | CCAGCATGTGACCACATGAATGGTGACAAGCAGCTTCAACTTTGTAATGGTGAGTCCTTCTGGTTATATTaGATAGCAAGTTTCAGACGA | + |
Preference number: 5 (lower is better) Translates to: PACDHMNGDKQLQLCNGESFWLY*IASFRR Trigger: TCGTCTGAAACTTGCTATCAAATATAACCAGAAGGA...CTCACCATTACAAAGTTGAAGCTGCTTGTCACCATTCATGTGGTCACATGCTGG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CAA 90 bp | TTAAACACCATGAGCTCTTCATTTCAAGTGTGTCTTAAGGTAGCTGCATTTGCTTTACAATGGTTGGTCTaGATGATCGTTTTGGCCGAT | + |
Preference number: 5 (lower is better) Translates to: LNTMSSSFQVCLKVAAFALQWLV*MIVLAD Trigger: ATCGGCCAAAACGATCATCAAGACCAACCATTGTAA...AGCAAATGCAGCTACCTTAAGACACACTTGAAATGAAGAGCTCATGGTGTTTAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS TCA 90 bp | TCCATAAGTTTTACAATGGTTGGTCTTGATGATCGTTTTGGCCGATaGTTAAGTAGTATATCAACAGCTCCCACTACTTCAGAGTCGATT | + |
Preference number: 5 (lower is better) Translates to: SISFTMVGLDDRFGR*LSSISTAPTTSESI Trigger: AATCGACTCTGAAGTAGTGGGAGCTGTTGATATACTACTTAATCATCGGCCAAAACGATCATCAAGACCAACCATTGTAAAACTTATGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS-3UTR CAA 90 bp | TTAAACACCATGAGCTCTTCATTTCAAGTGTGTCTTAAGGTAGCTGCATTTGCTCGACATCCATCGTTGTaGAATATTCTGGATTCTGAA | + |
Preference number: 5 (lower is better) Translates to: LNTMSSSFQVCLKVAAFARHPSL*NILDSE Trigger: TTCAGAATCCAGAATATTCAACAACGATGGATGTCG...AGCAAATGCAGCTACCTTAAGACACACTTGAAATGAAGAGCTCATGGTGTTTAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS CCA 72 bp | CTTCAGCGCCATCACTTCGTTGGGCGACGAGGAGGATaGGGAGGAAGGCAGGGAGGAGGAGGAGACGCCCGA | + |
Preference number: 6 (lower is better) Translates to: LQRHHFVGRRGG*GGRQGGGGDAR Trigger: TCGGGCGTCTCCTCCTCCTCCCTGCCTTCCTCCCCATCCTCCTCGTCGCCCAACGAAGTGATGGCGCTGAAG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000053785.10 ENSMUST00000189137.7 ENSMUST00000190497.2 ENSMUST00000190604.7 |
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CDS CAA 90 bp | TTCTCCTCCTTCACCTCTCGCACATCCTTCAGCGCCATCACTTCGTaGGGCGACGAGGAGGATGGGGAGGAAGGCAGGGAGGAGGAGGAG | + |
Preference number: 6 (lower is better) Translates to: FSSFTSRTSFSAITS*GDEEDGEEGREEEE Trigger: CTCCTCCTCCTCCCTGCCTTCCTCCCCATCCTCCTCGTCGCCCAACGAAGTGATGGCGCTGAAGGATGTGCGAGAGGTGAAGGAGGAGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053785.10 ENSMUST00000189137.7 ENSMUST00000190497.2 ENSMUST00000190604.7 |
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CDS CAA 72 bp | TTCACCTCTCGCACATCCTTCAGCGCCATCACTTCGTaGGGCGACGAGGAGGATGGGGAGGAAGGCAGGGAG | + |
Preference number: 6 (lower is better) Translates to: FTSRTSFSAITS*GDEEDGEEGRE Trigger: CTCCCTGCCTTCCTCCCCATCCTCCTCGTCGCCCAACGAAGTGATGGCGCTGAAGGATGTGCGAGAGGTGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000053785.10 ENSMUST00000189137.7 ENSMUST00000190497.2 ENSMUST00000190604.7 |
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CDS GCA 72 bp | AGCTCCCACTACTTCAGAGTCGATTGCCACCAAAAGTaGATCTGCGGACTGACAACCGTAGTCCAAAAGCAG | + |
Preference number: 6 (lower is better) Translates to: SSHYFRVDCHQK*ICGLTTVVQKQ Trigger: CTGCTTTTGGACTACGGTTGTCAGTCCGCAGATGCACTTTTGGTGGCAATCGACTCTGAAGTAGTGGGAGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |
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CDS CAA 72 bp | GTAGTATATCAACAGCTCCCACTACTTCAGAGTCGATaGCCACCAAAAGTGCATCTGCGGACTGACAACCGT | + |
Preference number: 6 (lower is better) Translates to: VVYQQLPLLQSR*PPKVHLRTDNR Trigger: ACGGTTGTCAGTCCGCAGATGCACTTTTGGTGGCAATCGACTCTGAAGTAGTGGGAGCTGTTGATATACTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000189137.7 |