Pregenerated sensors for TRPA1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000032769Ensembl transcript IDs: ENSMUST00000041447.5, ENSMUST00000235071.2
Found 150 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | GTCATGTGGCTCAAAATGATGTCATGTGTGATGGGACGAGGAGGGTaGGACTATGATCTAATCATAGTAGGAACAGAGATTATAGTGTCC | + |
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Preference number: 1 (lower is better) Translates to: VMWLKMMSCVMGRGG*DYDLIIVGTEIIVS Trigger: GGACACTATAATCTCTGTTCCTACTATGATTAGATCATAGTCTCACCCTCCTCGTCCCATCACACATGACATCATTTTGAGCCACATGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| 3UTR-3UTR TCA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACCCTTCATGTTCAAATTaGACATGTCAGAAAGGATCT | + |
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Preference number: 2 (lower is better) Translates to: NKEHGSRSRSLTDHISLHPSCSN*TCQKGS Trigger: AGATCCTTTCTGACATGTTCAATTTGAACATGAAGG...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| 3UTR-3UTR TCA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAATGGGACGAGGAGGGTaGGACTATGATCTAATCATA | + |
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Preference number: 2 (lower is better) Translates to: EFLLAVSEEVHNGIKSMAMGRGG*DYDLII Trigger: TATGATTAGATCATAGTCTCACCCTCCTCGTCCCAT...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| 3UTR-3UTR TCA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAAGGAGGGTGAGACTATaGTCTAATCATAGTAGGAAC | + |
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Preference number: 2 (lower is better) Translates to: EFLLAVSEEVHNGIKSMARRVRL*SNHSRN Trigger: GTTCCTACTATGATTAGATCATAGTCTCACCCTCCT...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| 3UTR-3UTR TCA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAAAGGGTTTAAATGTATaGGTCTGTGGGCAACGTTTC | + |
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Preference number: 2 (lower is better) Translates to: EFLLAVSEEVHNGIKSMAKGLNV*VCGQRF Trigger: GAAACGTTGCCCACAGACTCATACATTTAAACCCTT...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| 3UTR TCA 72 bp | GCAGCAGCAACAACTGGGACTAAGGGTTTAAATGTATaGGTCTGTGGGCAACGTTTCTCATTTAAACCATCA | + |
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Preference number: 3 (lower is better) Translates to: AAATTGTKGLNV*VCGQRFSFKPS Trigger: TGATGGTTTAAATGAGAAACGTTGCCCACAGACTCATACATTTAAACCCTTAGTCCCAGTTGTTGCTGCTGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| 3UTR GCA 72 bp | TATGTATGGGTGAGGTTGCAGGAACTAGGATCTCCATaGAGCAATGTTAGTCAACTTTCTGTTTCTTTGCTC | + |
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Preference number: 3 (lower is better) Translates to: YVWVRLQELGSP*SNVSQLSVSLL Trigger: GAGCAAAGAAACAGAAAGTTGACTAACATTGCTGCATGGAGATCCTAGTTCCTGCAACCTCACCCATACATA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| 3UTR TCA 72 bp | CTCAAAATGATGTCATGTGTGATGGGACGAGGAGGGTaGGACTATGATCTAATCATAGTAGGAACAGAGATT | + |
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Preference number: 3 (lower is better) Translates to: LKMMSCVMGRGG*DYDLIIVGTEI Trigger: AATCTCTGTTCCTACTATGATTAGATCATAGTCTCACCCTCCTCGTCCCATCACACATGACATCATTTTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| 3UTR-3UTR CAA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCATCCTTCATGTTCAAATaGAACATGTCAGAAAGGATC | + |
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Preference number: 3 (lower is better) Translates to: EFLLAVSEEVHNGIKSMASFMFK*NMSERI Trigger: GATCCTTTCTGACATGTTCAATTTGAACATGAAGGA...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACCCACCCATGGAGGCGTaGTGCAAAGCAGTCCAGCCA | + |
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Preference number: 4 (lower is better) Translates to: NKEHGSRSRSLTDHISLHPPMEA*CKAVQP Trigger: TGGCTGGACTGCTTTGCATCACGCCTCCATGGGTGG...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | GTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAGCAGGAGCAGGAGTCAGTGGCTCCCTGGGTTaGAGCAAAATGGAGGGCCAT | + |
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Preference number: 4 (lower is better) Translates to: VSEEVHNGIKSMAAGAGVSGSLG*SKMEGH Trigger: ATGGCCCTCCATTTTGCTGCAACCCAGGGAGCCACT...GACTCCTGCTCCTGCTGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACGAGTGTACCCACCCATaGAGGCGTGATGCAAAGCAG | + |
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Preference number: 4 (lower is better) Translates to: NKEHGSRSRSLTDHISLHECTHP*RRDAKQ Trigger: CTGCTTTGCATCACGCCTCCATGGGTGGGTACACTC...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | GTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAGCAGGAGCAGGAGTCATGACCTTCATGGTCTaGGTGTACCCACCCATGGAG | + |
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Preference number: 4 (lower is better) Translates to: VSEEVHNGIKSMAAGAGVMTFMV*VYPPME Trigger: CTCCATGGGTGGGTACACTCAGACCATGAAGGTCAT...GACTCCTGCTCCTGCTGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | GTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAGCAGGAGCAGGAGTCCCAGCCTCTCCTTCTTaGACCTGTCTTGGAAAGAGC | + |
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Preference number: 4 (lower is better) Translates to: VSEEVHNGIKSMAAGAGVPASPS*TCLGKS Trigger: GCTCTTTCCAAGACAGGTTCAAGAAGGAGAGGCTGG...GACTCCTGCTCCTGCTGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAAC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACTCCCGTGCTGCAAAGTaGAGTGCTGTGTTCCCTTCT | + |
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Preference number: 4 (lower is better) Translates to: NKEHGSRSRSLTDHISLHSRAAK*SAVFPS Trigger: AGAAGGGAACACAGCACTCCACTTTGCAGCACGGGA...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | GTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAGCAGGAGCAGGAGTCCCATGCACAGCTATGTaGAGGGGTGACATCATGTTT | + |
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Preference number: 4 (lower is better) Translates to: VSEEVHNGIKSMAAGAGVPCTAM*RGDIMF Trigger: AAACATGATGTCACCCCTTCACATAGCTGTGCATGG...GACTCCTGCTCCTGCTGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACCAGAATCAGTGCTGTTaGTGTCTGCTCCCACTGATA | + |
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Preference number: 4 (lower is better) Translates to: NKEHGSRSRSLTDHISLHQNQCC*CLLPLI Trigger: TATCAGTGGGAGCAGACATCAACAGCACTGATTCTG...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACACCTCTGATCCACTTTaGGTAAGTACCAGAGTGGCA | + |
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Preference number: 4 (lower is better) Translates to: NKEHGSRSRSLTDHISLHTSDPL*VSTRVA Trigger: TGCCACTCTGGTACTTACGCAAAGTGGATCAGAGGT...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | GTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAGCAGGAGCAGGAGTCAGAGGGGTCATCCCATaGAGATCCCCTTCATTCAAA | + |
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Preference number: 4 (lower is better) Translates to: VSEEVHNGIKSMAAGAGVRGVIP*RSPSFK Trigger: TTTGAATGAAGGGGATCTCCATGGGATGACCCCTCT...GACTCCTGCTCCTGCTGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACTCGGAGGTTTGGATTTaGTCCTTGGCTGAGAAGAAA | + |
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Preference number: 4 (lower is better) Translates to: NKEHGSRSRSLTDHISLHSEVWI*SLAEKK Trigger: TTTCTTCTCAGCCAAGGAGCAAATCCAAACCTCCGA...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACTGCAGAAAGGAAGCTTaGTTCTTGTTCAGGAGGATG | + |
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Preference number: 4 (lower is better) Translates to: NKEHGSRSRSLTDHISLHCRKEA*FLFRRM Trigger: CATCCTCCTGAACAAGAAGCAAGCTTCCTTTCTGCA...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACTTGTGCAGGGCAATATaGAGAAAGGAAGCTTGCTTC | + |
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Preference number: 4 (lower is better) Translates to: NKEHGSRSRSLTDHISLHLCRAI*RKEACF Trigger: GAAGCAAGCTTCCTTTCTGCATATTGCCCTGCACAA...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACCTTCACTGTTGTCTTTaGCACACGTGGACATCAAAG | + |
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Preference number: 4 (lower is better) Translates to: NKEHGSRSRSLTDHISLHLHCCL*HTWTSK Trigger: CTTTGATGTCCACGTGTGCCAAAGACAACAGTGAAG...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCACCTTCTGCTGCTGCGTaGTGCAGAGGACAGAGATTT | + |
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Preference number: 4 (lower is better) Translates to: EFLLAVSEEVHNGIKSMAPSAAA*CRGQRF Trigger: AAATCTCTGTCCTCTGCATCACGCAGCAGCAGAAGG...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACTCCAAGTCTCCGCTTTaGACTGCTAGGTGGAGAGGG | + |
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Preference number: 4 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNSKSPL*TARWRG Trigger: CCCTCTCCACCTAGCAGTTCAAAGCGGAGACTTGGA...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACAGCTCTTTGATGTGTTaGATCTGCATAAACTCAGGC | + |
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Preference number: 4 (lower is better) Translates to: NKEHGSRSRSLTDHISLHSSLMC*ICINSG Trigger: GCCTGAGTTTATGCAGATGCAACACATCAAAGAGCT...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACGCGCCCATAACTGGCTaGAAAATGCAGGGGCGACTT | + |
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Preference number: 4 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNAPITG*KMQGRL Trigger: AAGTCGCCCCTGCATTTTGCAGCCAGTTATGGGCGC...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTGGCATGGCCTTCCCGTaGTGCAAAGTGGAGTGCTGT | + |
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Preference number: 4 (lower is better) Translates to: IICIPTTLVFIHSKETILGMAFP*CKVECC Trigger: ACAGCACTCCACTTTGCAGCACGGGAAGGCCATGCC...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTGCAACAGCCTTGGCATaGCCTTCCCGTGCTGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: IICIPTTLVFIHSKETILATALA*PSRAAK Trigger: CTTTGCAGCACGGGAAGGCCATGCCAAGGCTGTTGC...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCATCTGCCAGGTCATGGTaGTCAAATAACGAGGCTCTG | + |
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Preference number: 4 (lower is better) Translates to: EFLLAVSEEVHNGIKSMASARSW*SNNEAL Trigger: CAGAGCCTCGTTATTTGATCACCATGACCTGGCAGA...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | GTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAGCAGGAGCAGGAGTCCAGTTCTCAAACCTTTaGAGATACAGTAGGAAGTTC | + |
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Preference number: 4 (lower is better) Translates to: VSEEVHNGIKSMAAGAGVQFSNL*RYSRKF Trigger: GAACTTCCTACTGTATCTTCAAAGGTTTGAGAACTG...GACTCCTGCTCCTGCTGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | GTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAGCAGGAGCAGGAGTCCTCCTAGCATCATACTaGATGTCTGGATTAAGGAAA | + |
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Preference number: 4 (lower is better) Translates to: VSEEVHNGIKSMAAGAGVLLASY*MSGLRK Trigger: TTTCCTTAATCCAGACATTCAGTATGATGCTAGGAG...GACTCCTGCTCCTGCTGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACTTGACCTTCTGCTGCTaGGTGATGCAGAGGACAGAG | + |
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Preference number: 4 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNLTFCC*VMQRTE Trigger: CTCTGTCCTCTGCATCACGCAGCAGCAGAAGGTCAA...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | GTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAGCAGGAGCAGGAGTCTGCTGCACAGTCAAATaGAAAAAGTTACGTCCAAGA | + |
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Preference number: 4 (lower is better) Translates to: VSEEVHNGIKSMAAGAGVCCTVK*KKLRPR Trigger: TCTTGGACGTAACTTTTTGCATTTGACTGTGCAGCA...GACTCCTGCTCCTGCTGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACATGGCCTTCCCGTGCTaGAAAGTGGAGTGCTGTGTT | + |
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Preference number: 4 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNMAFPC*KVECCV Trigger: AACACAGCACTCCACTTTGCAGCACGGGAAGGCCAT...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACGTGAAGGCAATAAGCTaGCCAAAGGTCAGGACTGGG | + |
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Preference number: 4 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNVKAIS*PKVRTG Trigger: CCCAGTCCTGACCTTTGGGCAGCTTATTGCCTTCAC...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAGTGCCTGGGTCTATTTaGATACACGATGGTGGACCT | + |
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Preference number: 4 (lower is better) Translates to: EFLLAVSEEVHNGIKSMAVPGSI*IHDGGP Trigger: AGGTCCACCATCGTGTATCCAAATAGACCCAGGCAC...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGGCATCCTGCCGTGCCTaGGTCTATTTGGATACACGA | + |
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Preference number: 4 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMASCRA*VYLDTR Trigger: TCGTGTATCCAAATAGACCCAGGCACGGCAGGATGC...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACTTCAACTTGACCTTCTaGTGCTGCGTGATGCAGAGG | + |
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Preference number: 4 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNFNLTF*CCVMQR Trigger: CCTCTGCATCACGCAGCAGCAGAAGGTCAAGTTGAA...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCATGCTGCAAAGTGGAGTaGTGTGTTCCCTTCTTCATC | + |
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Preference number: 4 (lower is better) Translates to: EFLLAVSEEVHNGIKSMACCKVE*CVPFFI Trigger: GATGAAGAAGGGAACACAGCACTCCACTTTGCAGCA...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGGTAGCTCAAAAGCATTaGAACAGCCTTGGCATGGCC | + |
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Preference number: 4 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMVAQKH*NSLGMA Trigger: GGCCATGCCAAGGCTGTTGCAATGCTTTTGAGCTAC...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACGCTATTGCTCCACATTaGCACTGCATATACGCTGGG | + |
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Preference number: 4 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNAIAPH*HCIYAG Trigger: CCCAGCGTATATGCAGTGGCAATGTGGAGCAATAGC...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGGGAGGGCCATGCATTTaGCATTCTCCATCATGTCGA | + |
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Preference number: 4 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMGGPCI*HSPSCR Trigger: TCGACATGATGGAGAATGCCAAATGCATGGCCCTCC...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGGCAGTCCAGCCATTGTaGTCACTGAGAAATAAGGCC | + |
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Preference number: 4 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMAVQPL*SLRNKA Trigger: GGCCTTATTTCTCAGTGACCACAATGGCTGGACTGC...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACTGGACATCGATTGCTTaGAGAATTATGAGTGAAAAC | + |
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Preference number: 4 (lower is better) Translates to: NKEHGSRSRSLTDHISLHWTSIA*RIMSEN Trigger: GTTTTCACTCATAATTCTCCAAGCAATCGATGTCCA...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACATCATACTGAATGTCTaGATTAAGGAAAGCAATGGG | + |
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Preference number: 4 (lower is better) Translates to: NKEHGSRSRSLTDHISLHIILNV*IKESNG Trigger: CCCATTGCTTTCCTTAATCCAGACATTCAGTATGAT...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACAGCCATTGTGGTCACTaGGAAATAAGGCCCCTTTCT | + |
|
Preference number: 4 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNSHCGH*EIRPLS Trigger: AGAAAGGGGCCTTATTTCTCAGTGACCACAATGGCT...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGGGAGAACATAAAAGCTaGGGCCAAAAGCCAGTAGGA | + |
|
Preference number: 4 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMGEHKS*GQKPVG Trigger: TCCTACTGGCTTTTGGCCTCAGCTTTTATGTTCTCC...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTACGATGGTGGACCTCTaGTCCACTTTGCGTAAGTAC | + |
|
Preference number: 4 (lower is better) Translates to: IICIPTTLVFIHSKETILTMVDL*STLRKY Trigger: GTACTTACGCAAAGTGGATCAGAGGTCCACCATCGT...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATCATGTCGATGTGTaGACCGTTGTCCAGGCACAT | + |
|
Preference number: 4 (lower is better) Translates to: IICIPTTLVFIHSKETILHHVDV*TVVQAH Trigger: ATGTGCCTGGACAACGGTGCACACATCGACATGATG...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR GCA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCATTGATGAGCTCATGCTaGTTTTCCAAGAGGGAAGTG | + |
|
Preference number: 4 (lower is better) Translates to: EFLLAVSEEVHNGIKSMALMSSC*FSKREV Trigger: CACTTCCCTCTTGGAAAAGCAGCATGAGCTCATCAA...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGAAATTCCACTTGCTGTaGATCTGTTCCAGCCTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMKFHLL*ICSSLS Trigger: GGAGAGGCTGGAACAGATGCACAGCAAGTGGAATTT...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR CCA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGTTGGATACACGATGGTaGACCTCTGATCCACTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMLDTRW*TSDPLC Trigger: GCAAAGTGGATCAGAGGTCCACCATCGTGTATCCAA...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR CCA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGTCTATTTCGGAGGTTTaGATTTGCTCCTTGGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMSISEV*ICSLAE Trigger: CTCAGCCAAGGAGCAAATCCAAACCTCCGAAATAGA...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCTAGGTGGAGAGGGCTaGCTTTCTTGTGATTCACAA | + |
|
Preference number: 4 (lower is better) Translates to: IICIPTTLVFIHSKETILLGGEG*LSCDSQ Trigger: TTGTGAATCACAAGAAAGCCAGCCCTCTCCACCTAG...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR TCA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTGTCTCCCCACTTATTTaGTTTACACAGCTTAGCTCC | + |
|
Preference number: 4 (lower is better) Translates to: IICIPTTLVFIHSKETILVSPLI*FTQLSS Trigger: GGAGCTAAGCTGTGTAAATCAAATAAGTGGGGAGAC...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR GCA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTATGTTAGTGGCCTTGTaGTCAGTCAACACCTTGATC | + |
|
Preference number: 4 (lower is better) Translates to: IICIPTTLVFIHSKETILMLVAL*SVNTLI Trigger: GATCAAGGTGTTGACTGAGCACAAGGCCACTAACAT...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR GCA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCAAAATGGAGGGCCATaGATTTGGCATTCTCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: IICIPTTLVFIHSKETILQNGGP*IWHSPS Trigger: TGATGGAGAATGCCAAATGCATGGCCCTCCATTTTG...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTTCCTTGCGCTTATTGTaGAGGGCAATATGCAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: IICIPTTLVFIHSKETILSLRLL*RAICRK Trigger: CTTTCTGCATATTGCCCTGCACAATAAGCGCAAGGA...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTAGACAAAATTCCACTTaGTGTGCATCTGTTCCAGCC | + |
|
Preference number: 4 (lower is better) Translates to: IICIPTTLVFIHSKETILRQNST*CASVPA Trigger: GGCTGGAACAGATGCACAGCAAGTGGAATTTTGTCT...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTTGCAGCACAATGCAGTaGGGTATTTCCATAACCATC | + |
|
Preference number: 4 (lower is better) Translates to: IICIPTTLVFIHSKETILCSTMQ*GISITI Trigger: GATGGTTATGGAAATACCCCACTGCATTGTGCTGCA...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGTATTTGGATACACGATaGTGGACCTCTGATCCACTT | + |
|
Preference number: 4 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMYLDTR*WTSDPL Trigger: AAGTGGATCAGAGGTCCACCATCGTGTATCCAAATA...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGGATTTGCTCCTTGGCTaGGAAGAAACTTTACACTTT | + |
|
Preference number: 4 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMDLLLG*EETLHF Trigger: AAAGTGTAAAGTTTCTTCTCAGCCAAGGAGCAAATC...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACTTTTCTAAGTTGGTATaGAGTTCCACCTGCATAGCA | + |
|
Preference number: 4 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNFSKLV*SSTCIA Trigger: TGCTATGCAGGTGGAACTTCATACCAACTTAGAAAA...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR GCA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTGGTCAGGACTGGGTATaGCAACTCATTTCTAAACAA | + |
|
Preference number: 4 (lower is better) Translates to: IICIPTTLVFIHSKETILGQDWV*QLISKQ Trigger: TTGTTTAGAAATGAGTTGGCATACCCAGTCCTGACC...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCATTTGGATTTGCTCCTTaGCTGAGAAGAAACTTTACA | + |
|
Preference number: 4 (lower is better) Translates to: EFLLAVSEEVHNGIKSMAFGFAP*LRRNFT Trigger: TGTAAAGTTTCTTCTCAGCCAAGGAGCAAATCCAAA...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR CCA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACAGGACTTGTCTTCTGTaGAAGGTATCATGCAGAAAT | + |
|
Preference number: 4 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNRTCLL*KVSCRN Trigger: ATTTCTGCATGATACCTTCCACAGAAGACAAGTCCT...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGGTTCATGAGAACAATTaGGACAAACATTGTGAAGGC | + |
|
Preference number: 4 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMVHENN*DKHCEG Trigger: GCCTTCACAATGTTTGTCCCAATTGTTCTCATGAAC...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCATTCTTGAACCTGTCTTaGAAAGAGCAATGGTTATCT | + |
|
Preference number: 4 (lower is better) Translates to: EFLLAVSEEVHNGIKSMAFLNLS*KEQWLS Trigger: AGATAACCATTGCTCTTTCCAAGACAGGTTCAAGAA...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR TCA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGTCTATTCTTTCCTCATaGGTACTACTAGTTCCATTG | + |
|
Preference number: 4 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMSILSS*VLLVPL Trigger: CAATGGAACTAGTAGTACTCATGAGGAAAGAATAGA...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR GCA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACCTGATTGCCATCAACTaGATTCACAATATCACTACT | + |
|
Preference number: 4 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNLIAIN*IHNITT Trigger: AGTAGTGATATTGTGAATGCAGTTGATGGCAATCAG...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCTTTTATGTCTACTTTaGCACCTTTACAGAGGAGCA | + |
|
Preference number: 4 (lower is better) Translates to: IICIPTTLVFIHSKETILLLCLL*HLYRGA Trigger: TGCTCCTCTGTAAAGGTGCCAAAGTAGACATAAAAG...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 37% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CCA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACTCTTGGAAAGAGCAATaGTTATCTTCATCTTCTGTC | + |
|
Preference number: 4 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNSWKEQ*LSSSSV Trigger: GACAGAAGATGAAGATAACCATTGCTCTTTCCAAGA...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| 3UTR CAA 72 bp | TCTCCATGCAGCAATGTTAGTCAACTTTCTGTTTCTTaGCTCTTTTCCAAACTGAAATTCACTGAAATAAGT | + |
|
Preference number: 4 (lower is better) Translates to: SPCSNVSQLSVS*LFSKLKFTEIS Trigger: ACTTATTTCAGTGAATTTCAGTTTGGAAAAGAGCAAAGAAACAGAAAGTTGACTAACATTGCTGCATGGAGA 35% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS CCA 90 bp | AAAAGCATTGCAACAGCCTTGGCATGGCCTTCCCGTGCTGCAAAGTaGAGTGCTGTGTTCCCTTCTTCATCTAGTCGGTCTGTGCATTTC | + |
|
Preference number: 5 (lower is better) Translates to: KSIATALAWPSRAAK*SAVFPSSSSRSVHF Trigger: GAAATGCACAGACCGACTAGATGAAGAAGGGAACACAGCACTCCACTTTGCAGCACGGGAAGGCCATGCCAAGGCTGTTGCAATGCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS-3UTR CAA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACTGTAGCTCAAAAGCATaGCAACAGCCTTGGCATGGC | + |
|
Preference number: 5 (lower is better) Translates to: NKEHGSRSRSLTDHISLHCSSKA*QQPWHG Trigger: GCCATGCCAAGGCTGTTGCAATGCTTTTGAGCTACA...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS TCA 90 bp | ATTGCCATCAACTGCATTCACAATATCACTACTTCCGGTATAGGATaGGATCATGAGCTTAACGATGTCAGTGGCTCCCTGGGTTGCAGC | + |
|
Preference number: 5 (lower is better) Translates to: IAINCIHNITTSGIG*DHELNDVSGSLGCS Trigger: GCTGCAACCCAGGGAGCCACTGACATCGTTAAGCTCATGATCTCATCCTATACCGGAAGTAGTGATATTGTGAATGCAGTTGATGGCAAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CCA 90 bp | TACTCCCTACACACAGGGTGGTTGAGGAGTTCTATGCGGTTATGTTaGACCATGACATTGAGGATTGTAAGAGGCTCATATACCACATCC | + |
|
Preference number: 5 (lower is better) Translates to: YSLHTGWLRSSMRLC*TMTLRIVRGSYTTS Trigger: GGATGTGGTATATGAGCCTCTTACAATCCTCAATGTCATGGTCCAACATAACCGCATAGAACTCCTCAACCACCCTGTGTGTAGGGAGTA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS TCA 90 bp | CTTGATCACTTCGTTGTACATGCCATGCACAGCTATGTGAAGGGGTaGCATCATGTTTCTATTTCGGAGGTTTGGATTTGCTCCTTGGCT | + |
|
Preference number: 5 (lower is better) Translates to: LDHFVVHAMHSYVKG*HHVSISEVWICSLA Trigger: AGCCAAGGAGCAAATCCAAACCTCCGAAATAGAAACATGATGTCACCCCTTCACATAGCTGTGCATGGCATGTACAACGAAGTGATCAAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS GCA 90 bp | GAGATGATCTCCATCTTCTGGATGATGAGTTTGATGAGCTCATGCTaGTTTTCCAAGAGGGAAGTGAGGTCCTTCAGCCGATATTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: EMISIFWMMSLMSSC*FSKREVRSFSRYFC Trigger: ACAGAAATATCGGCTGAAGGACCTCACTTCCCTCTTGGAAAAGCAGCATGAGCTCATCAAACTCATCATCCAGAAGATGGAGATCATCTC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS GCA 90 bp | TCTGAGATGATCTCCATCTTCTGGATGATGAGTTTGATGAGCTCATaGTGCTTTTCCAAGAGGGAAGTGAGGTCCTTCAGCCGATATTTC | + |
|
Preference number: 5 (lower is better) Translates to: SEMISIFWMMSLMSS*CFSKREVRSFSRYF Trigger: GAAATATCGGCTGAAGGACCTCACTTCCCTCTTGGAAAAGCAGCATGAGCTCATCAAACTCATCATCCAGAAGATGGAGATCATCTCAGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CCA 90 bp | CACTTGCTGTGCATCTGTTCCAGCCTCTCCTTCTTGAACCTGTCTTaGAAAGAGCAATGGTTATCTTCATCTTCTGTCTCTGAGATGATC | + |
|
Preference number: 5 (lower is better) Translates to: HLLCICSSLSFLNLS*KEQWLSSSSVSEMI Trigger: GATCATCTCAGAGACAGAAGATGAAGATAACCATTGCTCTTTCCAAGACAGGTTCAAGAAGGAGAGGCTGGAACAGATGCACAGCAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS-3UTR CAA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCAGTGGCTCCCTGGGTaGCAGCAAAATGGAGGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: IICIPTTLVFIHSKETILQWLPG*QQNGGP Trigger: TGGCCCTCCATTTTGCTGCAACCCAGGGAGCCACTG...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR CAA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACAAAGCAGTCCAGCCATaGTGGTCACTGAGAAATAAG | + |
|
Preference number: 5 (lower is better) Translates to: NKEHGSRSRSLTDHISLHKAVQP*WSLRNK Trigger: CTTATTTCTCAGTGACCACAATGGCTGGACTGCTTT...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR CAA 90 bp | GTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAGCAGGAGCAGGAGTCTGTTGGACCATGACATaGAGGATTGTAAGAGGCTCA | + |
|
Preference number: 5 (lower is better) Translates to: VSEEVHNGIKSMAAGAGVCWTMT*RIVRGS Trigger: TGAGCCTCTTACAATCCTCAATGTCATGGTCCAACA...GACTCCTGCTCCTGCTGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS TCA 90 bp | GTCAACACCTTGATCACTTCGTTGTACATGCCATGCACAGCTATGTaGAGGGGTGACATCATGTTTCTATTTCGGAGGTTTGGATTTGCT | + |
|
Preference number: 5 (lower is better) Translates to: VNTLITSLYMPCTAM*RGDIMFLFRRFGFA Trigger: AGCAAATCCAAACCTCCGAAATAGAAACATGATGTCACCCCTTCACATAGCTGTGCATGGCATGTACAACGAAGTGATCAAGGTGTTGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS-3UTR CAA 90 bp | GTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAGCAGGAGCAGGAGTCGTTTGGATTTGCTCCTaGGCTGAGAAGAAACTTTAC | + |
|
Preference number: 5 (lower is better) Translates to: VSEEVHNGIKSMAAGAGVVWICS*AEKKLY Trigger: GTAAAGTTTCTTCTCAGCCAAGGAGCAAATCCAAAC...GACTCCTGCTCCTGCTGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR CAA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCATGGAGGGCCATGCATTaGGCATTCTCCATCATGTCG | + |
|
Preference number: 5 (lower is better) Translates to: EFLLAVSEEVHNGIKSMAWRAMH*AFSIMS Trigger: CGACATGATGGAGAATGCCAAATGCATGGCCCTCCA...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR CAA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCATATCATGCCCATTTTTaGCTGCCAGGTGGAGAGGGG | + |
|
Preference number: 5 (lower is better) Translates to: EFLLAVSEEVHNGIKSMAYHAHF*LPGGEG Trigger: CCCCTCTCCACCTGGCAGCAAAAAATGGGCATGATA...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR CAA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACTTCTATGCGGTTATGTaGGACCATGACATTGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: NKEHGSRSRSLTDHISLHFYAVM*DHDIED Trigger: ATCCTCAATGTCATGGTCCAACATAACCGCATAGAA...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR CAA 90 bp | AATAAAGAGCATGGCAGCAGGAGCAGGAGTCTTACTGATCACATTTCTCTCCACATTATTCCAGTAGAATaGAAGGCCATTCCAGGCTGT | + |
|
Preference number: 5 (lower is better) Translates to: NKEHGSRSRSLTDHISLHIIPVE*KAIPGC Trigger: ACAGCCTGGAATGGCCTTCAATTCTACTGGAATAAT...GTGGAGAGAAATGTGATCAGTAAGACTCCTGCTCCTGCTGCCATGCTCTTTATT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CAA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGCGTGCCTGGGTCTATTaGGATACACGATGGTGGACC | + |
|
Preference number: 5 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMRAWVY*DTRWWT Trigger: GGTCCACCATCGTGTATCCAAATAGACCCAGGCACG...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CAA 90 bp | GTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAGCAGGAGCAGGAGTCCTTCTTGAACCTGTCTaGGAAAGAGCAATGGTTATC | + |
|
Preference number: 5 (lower is better) Translates to: VSEEVHNGIKSMAAGAGVLLEPV*ERAMVI Trigger: GATAACCATTGCTCTTTCCAAGACAGGTTCAAGAAG...GACTCCTGCTCCTGCTGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAAC 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS GCA 90 bp | CGAAGAACCATTGATGATCAGTTCCATCAGTTCAACTTGACCTTCTaGTGCTGCGTGATGCAGAGGACAGAGATTTTCATCCTCATATTT | + |
|
Preference number: 5 (lower is better) Translates to: RRTIDDQFHQFNLTF*CCVMQRTEIFILIF Trigger: AAATATGAGGATGAAAATCTCTGTCCTCTGCATCACGCAGCAGCAGAAGGTCAAGTTGAACTGATGGAACTGATCATCAATGGTTCTTCG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS-3UTR CAA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCATGCAAAGCTTCACTGTaGTCTTTGGCACACGTGGAC | + |
|
Preference number: 5 (lower is better) Translates to: EFLLAVSEEVHNGIKSMACKASL*SLAHVD Trigger: GTCCACGTGTGCCAAAGACAACAGTGAAGCTTTGCA...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CAA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCATCCAGCCTCTCCTTCTaGAACCTGTCTTGGAAAGAG | + |
|
Preference number: 5 (lower is better) Translates to: EFLLAVSEEVHNGIKSMASSLSF*NLSWKE Trigger: CTCTTTCCAAGACAGGTTCAAGAAGGAGAGGCTGGA...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CAA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAACCTTAAAGGATTCCTaGGAGCAGTCCATGTCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: EFLLAVSEEVHNGIKSMATLKDS*EQSMSS Trigger: GGAAGACATGGACTGCTCCAAGGAATCCTTTAAGGT...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CAA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCATTGATGTTAGTGGCCTaGTGCTCAGTCAACACCTTG | + |
|
Preference number: 5 (lower is better) Translates to: EFLLAVSEEVHNGIKSMALMLVA*CSVNTL Trigger: CAAGGTGTTGACTGAGCACAAGGCCACTAACATCAA...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CAA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACCTACACACAGGGTGGTaGAGGAGTTCTATGCGGTTA | + |
|
Preference number: 5 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNLHTGW*RSSMRL Trigger: TAACCGCATAGAACTCCTCAACCACCCTGTGTGTAG...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS GCA 90 bp | AAGTTCATGAGAACAATTGGGACAAACATTGTGAAGGCAATAAGCTaGCCAAAGGTCAGGACTGGGTATGCCAACTCATTTCTAAACAAT | + |
|
Preference number: 5 (lower is better) Translates to: KFMRTIGTNIVKAIS*PKVRTGYANSFLNN Trigger: ATTGTTTAGAAATGAGTTGGCATACCCAGTCCTGACCTTTGGGCAGCTTATTGCCTTCACAATGTTTGTCCCAATTGTTCTCATGAACTT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS-3UTR CAA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGAAGGAAGCTTGCTTCTaGTTCAGGAGGATGTCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMKEACF*FRRMSA Trigger: TGCTGACATCCTCCTGAACAAGAAGCAAGCTTCCTT...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CAA 90 bp | GAATTTCTGCTTGCAGTTTCAGAAGAAGTCCATAATGGAATAAAGAGCATGGCAAAGACAAAATTCCACTaGCTGTGCATCTGTTCCAGC | + |
|
Preference number: 5 (lower is better) Translates to: EFLLAVSEEVHNGIKSMAKTKFH*LCICSS Trigger: GCTGGAACAGATGCACAGCAAGTGGAATTTTGTCTT...TGCCATGCTCTTTATTCCATTATGGACTTCTTCTGAAACTGCAAGCAGAAATTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR CAA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTTCAGAATCAGTGCTGTaGATGTCTGCTCCCACTGAT | + |
|
Preference number: 5 (lower is better) Translates to: IICIPTTLVFIHSKETILSESVL*MSAPTD Trigger: ATCAGTGGGAGCAGACATCAACAGCACTGATTCTGA...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CAA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACATGCAGAAAGGAAGCTaGCTTCTTGTTCAGGAGGAT | + |
|
Preference number: 5 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNMQKGS*LLVQED Trigger: ATCCTCCTGAACAAGAAGCAAGCTTCCTTTCTGCAT...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CAA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGAGAAGAATATCGCTATaGCTCCACATTGCCACTGCA | + |
|
Preference number: 5 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMRRISL*LHIATA Trigger: TGCAGTGGCAATGTGGAGCAATAGCGATATTCTTCT...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CAA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACGGTGCTGAAGGCATCTaGGAAATTCAGGAGAACATA | + |
|
Preference number: 5 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNGAEGI*EIQENI Trigger: TATGTTCTCCTGAATTTCCAAGATGCCTTCAGCACC...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CAA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACTCTTTTATGTCTACTTaGGCACCTTTACAGAGGAGC | + |
|
Preference number: 5 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNSFMST*APLQRS Trigger: GCTCCTCTGTAAAGGTGCCAAAGTAGACATAAAAGA...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CAA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCAGCTCTTTGATGTGTaGCATCTGCATAAACTCAGG | + |
|
Preference number: 5 (lower is better) Translates to: IICIPTTLVFIHSKETILQLFDV*HLHKLR Trigger: CCTGAGTTTATGCAGATGCAACACATCAAAGAGCTG...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CAA 90 bp | CAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTCATGTTCAAATTGAACCTCAATATGGTAGTCTaGACAGGACTTGTCTTCTGT | + |
|
Preference number: 5 (lower is better) Translates to: QPWFLFTRKRLSFMFKLNLNMVV*TGLVFC Trigger: ACAGAAGACAAGTCCTGTCAAGACTACCATATTGAG...GTTCAATTTGAACATGAAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
||
| CDS-3UTR CAA 90 bp | ATTCATACTTATCACAGTCTACTAACTAGGACTTCTGTCATGTGGCTCAAAATGTTCTGGATGATGAGTTaGATGAGCTCATGCTGCTTT | + |
|
Preference number: 5 (lower is better) Translates to: IHTYHSLLTRTSVMWLKMFWMMS*MSSCCF Trigger: AAAGCAGCATGAGCTCATCAAACTCATCATCCAGAA...CATTTTGAGCCACATGACAGAAGTCCTAGTTAGTAGACTGTGATAAGTATGAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CAA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTATTCCAGGCTGTATTTaGACAACAAGAAGGGTCATG | + |
|
Preference number: 5 (lower is better) Translates to: IICIPTTLVFIHSKETILIPGCI*TTRRVM Trigger: CATGACCCTTCTTGTTGTCAAAATACAGCCTGGAAT...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 38% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS-3UTR CAA 90 bp | ATAATATGCATTCCAACAACCCTGGTTTTTATTCACTCGAAAGAGACTATCCTTGGGCATTGGAGATACTaGAAATTATACTCAATATGG | + |
|
Preference number: 5 (lower is better) Translates to: IICIPTTLVFIHSKETILGHWRY*KLYSIW Trigger: CCATATTGAGTATAATTTCAAGTATCTCCAATGCCC...AAGGATAGTCTCTTTCGAGTGAATAAAAACCAGGGTTGTTGGAATGCATATTAT 36% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000041447.5 |
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| CDS CCA 72 bp | GCAACAGCCTTGGCATGGCCTTCCCGTGCTGCAAAGTaGAGTGCTGTGTTCCCTTCTTCATCTAGTCGGTCT | + |
|
Preference number: 6 (lower is better) Translates to: ATALAWPSRAAK*SAVFPSSSSRS Trigger: AGACCGACTAGATGAAGAAGGGAACACAGCACTCCACTTTGCAGCACGGGAAGGCCATGCCAAGGCTGTTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS GCA 72 bp | CAAAAGCATTGCAACAGCCTTGGCATGGCCTTCCCGTaGTGCAAAGTGGAGTGCTGTGTTCCCTTCTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: QKHCNSLGMAFP*CKVECCVPFFI Trigger: GATGAAGAAGGGAACACAGCACTCCACTTTGCAGCACGGGAAGGCCATGCCAAGGCTGTTGCAATGCTTTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS GCA 72 bp | GATCATGAGCTTAACGATGTCAGTGGCTCCCTGGGTTaGAGCAAAATGGAGGGCCATGCATTTGGCATTCTC | + |
|
Preference number: 6 (lower is better) Translates to: DHELNDVSGSLG*SKMEGHAFGIL Trigger: GAGAATGCCAAATGCATGGCCCTCCATTTTGCTGCAACCCAGGGAGCCACTGACATCGTTAAGCTCATGATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CCA 72 bp | GATGAGATCATGAGCTTAACGATGTCAGTGGCTCCCTaGGTTGCAGCAAAATGGAGGGCCATGCATTTGGCA | + |
|
Preference number: 6 (lower is better) Translates to: DEIMSLTMSVAP*VAAKWRAMHLA Trigger: TGCCAAATGCATGGCCCTCCATTTTGCTGCAACCCAGGGAGCCACTGACATCGTTAAGCTCATGATCTCATC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS GCA 72 bp | TCCATCTTCTGGATGATGAGTTTGATGAGCTCATGCTaGTTTTCCAAGAGGGAAGTGAGGTCCTTCAGCCGA | + |
|
Preference number: 6 (lower is better) Translates to: SIFWMMSLMSSC*FSKREVRSFSR Trigger: TCGGCTGAAGGACCTCACTTCCCTCTTGGAAAAGCAGCATGAGCTCATCAAACTCATCATCCAGAAGATGGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CAA 72 bp | CGAAGAACCATTGATGATCAGTTCCATCAGTTCAACTaGACCTTCTGCTGCTGCGTGATGCAGAGGACAGAG | + |
|
Preference number: 6 (lower is better) Translates to: RRTIDDQFHQFN*TFCCCVMQRTE Trigger: CTCTGTCCTCTGCATCACGCAGCAGCAGAAGGTCAAGTTGAACTGATGGAACTGATCATCAATGGTTCTTCG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CAA 90 bp | GCACACGTGGACATCAAAGCCGTGTTCCCATTCTCTCCTTCTAAATaGATGTTAGTGGCCTTGTGCTCAGTCAACACCTTGATCACTTCG | + |
|
Preference number: 6 (lower is better) Translates to: AHVDIKAVFPFSPSK*MLVALCSVNTLITS Trigger: CGAAGTGATCAAGGTGTTGACTGAGCACAAGGCCACTAACATCAATTTAGAAGGAGAGAATGGGAACACGGCTTTGATGTCCACGTGTGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CAA 90 bp | ACAGGGTGGTTGAGGAGTTCTATGCGGTTATGTTGGACCATGACATaGAGGATTGTAAGAGGCTCATATACCACATCCTGGGTAGGTGCT | + |
|
Preference number: 6 (lower is better) Translates to: TGWLRSSMRLCWTMT*RIVRGSYTTSWVGA Trigger: AGCACCTACCCAGGATGTGGTATATGAGCCTCTTACAATCCTCAATGTCATGGTCCAACATAACCGCATAGAACTCCTCAACCACCCTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CAA 90 bp | GTACTCCCTACACACAGGGTGGTTGAGGAGTTCTATGCGGTTATGTaGGACCATGACATTGAGGATTGTAAGAGGCTCATATACCACATC | + |
|
Preference number: 6 (lower is better) Translates to: VLPTHRVVEEFYAVM*DHDIEDCKRLIYHI Trigger: GATGTGGTATATGAGCCTCTTACAATCCTCAATGTCATGGTCCAACATAACCGCATAGAACTCCTCAACCACCCTGTGTGTAGGGAGTAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS GCA 72 bp | CAAATAACGAGGCTCTGTGAAGCAGGGTCTCCTGATTaGCATCAACTGCATTCACAATATCACTACTTCCGG | + |
|
Preference number: 6 (lower is better) Translates to: QITRLCEAGSPD*HQLHSQYHYFR Trigger: CCGGAAGTAGTGATATTGTGAATGCAGTTGATGGCAATCAGGAGACCCTGCTTCACAGAGCCTCGTTATTTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS GCA 72 bp | ATCTCCATCTTCTGGATGATGAGTTTGATGAGCTCATaGTGCTTTTCCAAGAGGGAAGTGAGGTCCTTCAGC | + |
|
Preference number: 6 (lower is better) Translates to: ISIFWMMSLMSS*CFSKREVRSFS Trigger: GCTGAAGGACCTCACTTCCCTCTTGGAAAAGCAGCATGAGCTCATCAAACTCATCATCCAGAAGATGGAGAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CAA 90 bp | CACTTCACACGAAGAACCATTGATGATCAGTTCCATCAGTTCAACTaGACCTTCTGCTGCTGCGTGATGCAGAGGACAGAGATTTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: HFTRRTIDDQFHQFN*TFCCCVMQRTEIFI Trigger: GATGAAAATCTCTGTCCTCTGCATCACGCAGCAGCAGAAGGTCAAGTTGAACTGATGGAACTGATCATCAATGGTTCTTCGTGTGAAGTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS GCA 72 bp | GATCAGTTCCATCAGTTCAACTTGACCTTCTGCTGCTaGGTGATGCAGAGGACAGAGATTTTCATCCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: DQFHQFNLTFCC*VMQRTEIFILI Trigger: TATGAGGATGAAAATCTCTGTCCTCTGCATCACGCAGCAGCAGAAGGTCAAGTTGAACTGATGGAACTGATC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CCA 72 bp | CACACAGGGTGGTTGAGGAGTTCTATGCGGTTATGTTaGACCATGACATTGAGGATTGTAAGAGGCTCATAT | + |
|
Preference number: 6 (lower is better) Translates to: HTGWLRSSMRLC*TMTLRIVRGSY Trigger: ATATGAGCCTCTTACAATCCTCAATGTCATGGTCCAACATAACCGCATAGAACTCCTCAACCACCCTGTGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CAA 72 bp | GACATCAAAGCCGTGTTCCCATTCTCTCCTTCTAAATaGATGTTAGTGGCCTTGTGCTCAGTCAACACCTTG | + |
|
Preference number: 6 (lower is better) Translates to: DIKAVFPFSPSK*MLVALCSVNTL Trigger: CAAGGTGTTGACTGAGCACAAGGCCACTAACATCAATTTAGAAGGAGAGAATGGGAACACGGCTTTGATGTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CAA 72 bp | ACACACAGGGTGGTTGAGGAGTTCTATGCGGTTATGTaGGACCATGACATTGAGGATTGTAAGAGGCTCATA | + |
|
Preference number: 6 (lower is better) Translates to: THRVVEEFYAVM*DHDIEDCKRLI Trigger: TATGAGCCTCTTACAATCCTCAATGTCATGGTCCAACATAACCGCATAGAACTCCTCAACCACCCTGTGTGT 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CAA 72 bp | GTCTCTGAGATGATCTCCATCTTCTGGATGATGAGTTaGATGAGCTCATGCTGCTTTTCCAAGAGGGAAGTG | + |
|
Preference number: 6 (lower is better) Translates to: VSEMISIFWMMS*MSSCCFSKREV Trigger: CACTTCCCTCTTGGAAAAGCAGCATGAGCTCATCAAACTCATCATCCAGAAGATGGAGATCATCTCAGAGAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS TCA 72 bp | TTCGTTGTACATGCCATGCACAGCTATGTGAAGGGGTaGCATCATGTTTCTATTTCGGAGGTTTGGATTTGC | + |
|
Preference number: 6 (lower is better) Translates to: FVVHAMHSYVKG*HHVSISEVWIC Trigger: GCAAATCCAAACCTCCGAAATAGAAACATGATGTCACCCCTTCACATAGCTGTGCATGGCATGTACAACGAA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
||
| CDS TCA 72 bp | AACTGCATTCACAATATCACTACTTCCGGTATAGGATaGGATCATGAGCTTAACGATGTCAGTGGCTCCCTG | + |
|
Preference number: 6 (lower is better) Translates to: NCIHNITTSGIG*DHELNDVSGSL Trigger: CAGGGAGCCACTGACATCGTTAAGCTCATGATCTCATCCTATACCGGAAGTAGTGATATTGTGAATGCAGTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
||
| CDS GCA 72 bp | ATTGATGATCAGTTCCATCAGTTCAACTTGACCTTCTaGTGCTGCGTGATGCAGAGGACAGAGATTTTCATC | + |
|
Preference number: 6 (lower is better) Translates to: IDDQFHQFNLTF*CCVMQRTEIFI Trigger: GATGAAAATCTCTGTCCTCTGCATCACGCAGCAGCAGAAGGTCAAGTTGAACTGATGGAACTGATCATCAAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
||
| CDS GCA 72 bp | AGAACAATTGGGACAAACATTGTGAAGGCAATAAGCTaGCCAAAGGTCAGGACTGGGTATGCCAACTCATTT | + |
|
Preference number: 6 (lower is better) Translates to: RTIGTNIVKAIS*PKVRTGYANSF Trigger: AAATGAGTTGGCATACCCAGTCCTGACCTTTGGGCAGCTTATTGCCTTCACAATGTTTGTCCCAATTGTTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
||
| CDS GCA 72 bp | GTCTTAACTGCGTTTAAGACAAAATTCCACTTGCTGTaGATCTGTTCCAGCCTCTCCTTCTTGAACCTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: VLTAFKTKFHLL*ICSSLSFLNLS Trigger: AGACAGGTTCAAGAAGGAGAGGCTGGAACAGATGCACAGCAAGTGGAATTTTGTCTTAAACGCAGTTAAGAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
||
| CDS CCA 72 bp | AAATTTGCAAAGCTTCACTGTTGTCTTTGGCACACGTaGACATCAAAGCCGTGTTCCCATTCTCTCCTTCTA | + |
|
Preference number: 6 (lower is better) Translates to: KFAKLHCCLWHT*TSKPCSHSLLL Trigger: TAGAAGGAGAGAATGGGAACACGGCTTTGATGTCCACGTGTGCCAAAGACAACAGTGAAGCTTTGCAAATTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
||
| CDS CCA 72 bp | TGCATCTGTTCCAGCCTCTCCTTCTTGAACCTGTCTTaGAAAGAGCAATGGTTATCTTCATCTTCTGTCTCT | + |
|
Preference number: 6 (lower is better) Translates to: CICSSLSFLNLS*KEQWLSSSSVS Trigger: AGAGACAGAAGATGAAGATAACCATTGCTCTTTCCAAGACAGGTTCAAGAAGGAGAGGCTGGAACAGATGCA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
||
| CDS CAA 72 bp | TTGAGGAGTTCTATGCGGTTATGTTGGACCATGACATaGAGGATTGTAAGAGGCTCATATACCACATCCTGG | + |
|
Preference number: 6 (lower is better) Translates to: LRSSMRLCWTMT*RIVRGSYTTSW Trigger: CCAGGATGTGGTATATGAGCCTCTTACAATCCTCAATGTCATGGTCCAACATAACCGCATAGAACTCCTCAA 44% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
||
| CDS CAA 90 bp | CACAGCTTAGCTCCTTTTTCTAACAAAATTTGCAAAGCTTCACTGTaGTCTTTGGCACACGTGGACATCAAAGCCGTGTTCCCATTCTCT | + |
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Preference number: 6 (lower is better) Translates to: HSLAPFSNKICKASL*SLAHVDIKAVFPFS Trigger: AGAGAATGGGAACACGGCTTTGATGTCCACGTGTGCCAAAGACAACAGTGAAGCTTTGCAAATTTTGTTAGAAAAAGGAGCTAAGCTGTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CAA 90 bp | CATCTTTTATTTCTGATGGTTGTGAGAACCACTTCCTTGCGCTTATaGTGCAGGGCAATATGCAGAAAGGAAGCTTGCTTCTTGTTCAGG | + |
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Preference number: 6 (lower is better) Translates to: HLLFLMVVRTTSLRL*CRAICRKEACFLFR Trigger: CCTGAACAAGAAGCAAGCTTCCTTTCTGCATATTGCCCTGCACAATAAGCGCAAGGAAGTGGTTCTCACAACCATCAGAAATAAAAGATG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS TCA 72 bp | TTGATCACTTCGTTGTACATGCCATGCACAGCTATGTaGAGGGGTGACATCATGTTTCTATTTCGGAGGTTT | + |
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Preference number: 6 (lower is better) Translates to: LITSLYMPCTAM*RGDIMFLFRRF Trigger: AAACCTCCGAAATAGAAACATGATGTCACCCCTTCACATAGCTGTGCATGGCATGTACAACGAAGTGATCAA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS GCA 72 bp | CCATTCTCTCCTTCTAAATTGATGTTAGTGGCCTTGTaGTCAGTCAACACCTTGATCACTTCGTTGTACATG | + |
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Preference number: 6 (lower is better) Translates to: PFSPSKLMLVAL*SVNTLITSLYM Trigger: CATGTACAACGAAGTGATCAAGGTGTTGACTGAGCACAAGGCCACTAACATCAATTTAGAAGGAGAGAATGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CAA 72 bp | TTCCCATTCTCTCCTTCTAAATTGATGTTAGTGGCCTaGTGCTCAGTCAACACCTTGATCACTTCGTTGTAC | + |
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Preference number: 6 (lower is better) Translates to: FPFSPSKLMLVA*CSVNTLITSLY Trigger: GTACAACGAAGTGATCAAGGTGTTGACTGAGCACAAGGCCACTAACATCAATTTAGAAGGAGAGAATGGGAA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CAA 72 bp | GCTCCTTTTTCTAACAAAATTTGCAAAGCTTCACTGTaGTCTTTGGCACACGTGGACATCAAAGCCGTGTTC | + |
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Preference number: 6 (lower is better) Translates to: APFSNKICKASL*SLAHVDIKAVF Trigger: GAACACGGCTTTGATGTCCACGTGTGCCAAAGACAACAGTGAAGCTTTGCAAATTTTGTTAGAAAAAGGAGC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CAA 72 bp | GGCTCATATACCACATCCTGGGTAGGTGCTACTTTTTaGGTCATGGATAATGGGCATTGGAGATACTTGAAA | + |
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Preference number: 6 (lower is better) Translates to: GSYTTSWVGATF*VMDNGHWRYLK Trigger: TTTCAAGTATCTCCAATGCCCATTATCCATGACCAAAAAAGTAGCACCTACCCAGGATGTGGTATATGAGCC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CAA 90 bp | TTAGCTCCTTTTTCTAACAAAATTTGCAAAGCTTCACTGTTGTCTTaGGCACACGTGGACATCAAAGCCGTGTTCCCATTCTCTCCTTCT | + |
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Preference number: 6 (lower is better) Translates to: LAPFSNKICKASLLS*AHVDIKAVFPFSPS Trigger: AGAAGGAGAGAATGGGAACACGGCTTTGATGTCCACGTGTGCCAAAGACAACAGTGAAGCTTTGCAAATTTTGTTAGAAAAAGGAGCTAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CCA 72 bp | TTTCTAACAAAATTTGCAAAGCTTCACTGTTGTCTTTaGCACACGTGGACATCAAAGCCGTGTTCCCATTCT | + |
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Preference number: 6 (lower is better) Translates to: FLTKFAKLHCCL*HTWTSKPCSHS Trigger: AGAATGGGAACACGGCTTTGATGTCCACGTGTGCCAAAGACAACAGTGAAGCTTTGCAAATTTTGTTAGAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CAA 72 bp | TTTTCTAACAAAATTTGCAAAGCTTCACTGTTGTCTTaGGCACACGTGGACATCAAAGCCGTGTTCCCATTC | + |
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Preference number: 6 (lower is better) Translates to: FSNKICKASLLS*AHVDIKAVFPF Trigger: GAATGGGAACACGGCTTTGATGTCCACGTGTGCCAAAGACAACAGTGAAGCTTTGCAAATTTTGTTAGAAAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS TCA 72 bp | TGCTGCACAGTCAAATGCAAAAAGTTACGTCCAAGATaGTCTTTTATGTCTACTTTGGCACCTTTACAGAGG | + |
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Preference number: 6 (lower is better) Translates to: CCTVKCKKLRPR*SFMSTLAPLQR Trigger: CCTCTGTAAAGGTGCCAAAGTAGACATAAAAGATCATCTTGGACGTAACTTTTTGCATTTGACTGTGCAGCA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CCA 72 bp | AAAAGTTACGTCCAAGATGATCTTTTATGTCTACTTTaGCACCTTTACAGAGGAGCAAATTCACAATGTTCC | + |
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Preference number: 6 (lower is better) Translates to: KSYVQDDLLCLL*HLYRGANSQCS Trigger: GGAACATTGTGAATTTGCTCCTCTGTAAAGGTGCCAAAGTAGACATAAAAGATCATCTTGGACGTAACTTTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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| CDS CCA 72 bp | ACTCAATATGGTAGTCTTGACAGGACTTGTCTTCTGTaGAAGGTATCATGCAGAAATCTAAAAGAACTTTCA | + |
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Preference number: 6 (lower is better) Translates to: TQYGSLDRTCLL*KVSCRNLKELS Trigger: TGAAAGTTCTTTTAGATTTCTGCATGATACCTTCCACAGAAGACAAGTCCTGTCAAGACTACCATATTGAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000041447.5 ENSMUST00000235071.2 |
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