Pregenerated sensors for TRP53TG5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000017720Ensembl transcript IDs: ENSMUST00000017864.3
Found 42 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| CDS-3UTR GCA 90 bp | GCGACTGTCTTGCCTATCCCTTCCACTAAGCTGATAGCACGATCTCTACTTCTTGCCCTGGGATGTGTATaGGTGTGGGAAGCCCCTCAA | + |
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Preference number: 4 (lower is better) Translates to: ATVLPIPSTKLIARSLLLALGCV*VWEAPQ Trigger: TTGAGGGGCTTCCCACACGCATACACATCCCAGGGC...AAGAAGTAGAGATCGTGCTATCAGCTTAGTGGAAGGGATAGGCAAGACAGTCGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR CCA 90 bp | ATTTGTAGACTTGCGACTGTCTTGCCTATCCCTTCCACTAAGCTGATAGCACGAGGATGTGTATGCGTGTaGGAAGCCCCTCAAACCAGA | + |
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Preference number: 4 (lower is better) Translates to: ICRLATVLPIPSTKLIARGCVCV*EAPQTR Trigger: TCTGGTTTGAGGGGCTTCCCACACGCATACACATCC...TCGTGCTATCAGCTTAGTGGAAGGGATAGGCAAGACAGTCGCAAGTCTACAAAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR GCA 90 bp | ATTTGTAGACTTGCGACTGTCTTGCCTATCCCTTCCACTAAGCTGATAGCACGATTCTGGGCCCTGGCTTaGAAGCCACCACTCTTTATT | + |
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Preference number: 4 (lower is better) Translates to: ICRLATVLPIPSTKLIARFWALA*KPPLFI Trigger: AATAAAGAGTGGTGGCTTGCAAGCCAGGGCCCAGAA...TCGTGCTATCAGCTTAGTGGAAGGGATAGGCAAGACAGTCGCAAGTCTACAAAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR TCA 90 bp | GCCATAGGGGAGATTTTATTTGTAGACTTGCGACTGTCTTGCCTATCCCTTCCAGGATCTTTGGAACTCTaGGCATTGAATTCCAGCACC | + |
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Preference number: 4 (lower is better) Translates to: AIGEILFVDLRLSCLSLPGSLEL*ALNSST Trigger: GGTGCTGGAATTCAATGCTCAGAGTTCCAAAGATCC...TGGAAGGGATAGGCAAGACAGTCGCAAGTCTACAAATAAAATCTCCCCTATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR GCA 90 bp | CTTGCGACTGTCTTGCCTATCCCTTCCACTAAGCTGATAGCACGATCTCTACTTATCACTTTGCTCACATaGTGGGTTATCTTGTCCTGC | + |
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Preference number: 4 (lower is better) Translates to: LATVLPIPSTKLIARSLLITLLT*WVILSC Trigger: GCAGGACAAGATAACCCAGCATGTGAGCAAAGTGAT...AAGTAGAGATCGTGCTATCAGCTTAGTGGAAGGGATAGGCAAGACAGTCGCAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR TCA 90 bp | TGCCATAGGGGAGATTTTATTTGTAGACTTGCGACTGTCTTGCCTATCCCTTCCGGCTATTTGAGCTCTTaGATAGCTTCAAGAGGGACA | + |
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Preference number: 4 (lower is better) Translates to: CHRGDFICRLATVLPIPSGYLSS*IASRGT Trigger: TGTCCCTCTTGAAGCTATTCAAGAGCTCAAATAGCC...GGAAGGGATAGGCAAGACAGTCGCAAGTCTACAAATAAAATCTCCCCTATGGCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR GCA 90 bp | CTTGCGACTGTCTTGCCTATCCCTTCCACTAAGCTGATAGCACGATCTCTACTTTCCCTAGAAGAGATTTaGAGGATCTTTGGAACTCTG | + |
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Preference number: 4 (lower is better) Translates to: LATVLPIPSTKLIARSLLSLEEI*RIFGTL Trigger: CAGAGTTCCAAAGATCCTGCAAATCTCTTCTAGGGA...AAGTAGAGATCGTGCTATCAGCTTAGTGGAAGGGATAGGCAAGACAGTCGCAAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR CCA 90 bp | GCCATAGGGGAGATTTTATTTGTAGACTTGCGACTGTCTTGCCTATCCCTTCCAAATTCCAGCACCTTCTaGCCAGCTTATGGAGTTCTT | + |
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Preference number: 4 (lower is better) Translates to: AIGEILFVDLRLSCLSLPNSSTF*PAYGVL Trigger: AAGAACTCCATAAGCTGGCCAGAAGGTGCTGGAATT...TGGAAGGGATAGGCAAGACAGTCGCAAGTCTACAAATAAAATCTCCCCTATGGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR CCA 90 bp | TTGCCTATCCCTTCCACTAAGCTGATAGCACGATCTCTACTTCTTACAATTCAACTTCTGGCCAGCTTATaGAGTTCTTGGATCCGGCTA | + |
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Preference number: 4 (lower is better) Translates to: LPIPSTKLIARSLLLTIQLLASL*SSWIRL Trigger: TAGCCGGATCCAAGAACTCCATAAGCTGGCCAGAAG...TTGAATTGTAAGAAGTAGAGATCGTGCTATCAGCTTAGTGGAAGGGATAGGCAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| 3UTR CAA 72 bp | CATAGGGGAGATTTTATTTGTAGACTTGCGACTGTCTaGCCTATCCCTTCCACTAAGCTGATAGCACGATCT | + |
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Preference number: 4 (lower is better) Translates to: HRGDFICRLATV*PIPSTKLIARS Trigger: AGATCGTGCTATCAGCTTAGTGGAAGGGATAGGCAAGACAGTCGCAAGTCTACAAATAAAATCTCCCCTATG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR CCA 90 bp | GTCTTGCCTATCCCTTCCACTAAGCTGATAGCACGATCTCTACTTCTTACAATTACTTTGCTCACATGCTaGGTTATCTTGTCCTGCAGT | + |
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Preference number: 4 (lower is better) Translates to: VLPIPSTKLIARSLLLTITLLTC*VILSCS Trigger: ACTGCAGGACAAGATAACCCAGCATGTGAGCAAAGT...AATTGTAAGAAGTAGAGATCGTGCTATCAGCTTAGTGGAAGGGATAGGCAAGAC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR CCA 90 bp | TGCCATAGGGGAGATTTTATTTGTAGACTTGCGACTGTCTTGCCTATCCCTTCCTGCCTTCTTAGAATTTaGTCTCATTTCAAGGACCCT | + |
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Preference number: 4 (lower is better) Translates to: CHRGDFICRLATVLPIPSCLLRI*SHFKDP Trigger: AGGGTCCTTGAAATGAGACCAAATTCTAAGAAGGCA...GGAAGGGATAGGCAAGACAGTCGCAAGTCTACAAATAAAATCTCCCCTATGGCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR GCA 90 bp | GCCATAGGGGAGATTTTATTTGTAGACTTGCGACTGTCTTGCCTATCCCTTCCATGCAGTTTCTCATCTTaGATCTTAGAAGGCACTTTA | + |
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Preference number: 4 (lower is better) Translates to: AIGEILFVDLRLSCLSLPCSFSS*ILEGTL Trigger: TAAAGTGCCTTCTAAGATGCAAGATGAGAAACTGCA...TGGAAGGGATAGGCAAGACAGTCGCAAGTCTACAAATAAAATCTCCCCTATGGC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR GCA 90 bp | CCTATCCCTTCCACTAAGCTGATAGCACGATCTCTACTTCTTACAATTCAAGTTTTCCTTTACGGACTCTaGCTTCTTAGAATTTGGTCT | + |
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Preference number: 4 (lower is better) Translates to: PIPSTKLIARSLLLTIQVFLYGL*LLRIWS Trigger: AGACCAAATTCTAAGAAGGCAGAGTCCGTAAAGGAA...AACTTGAATTGTAAGAAGTAGAGATCGTGCTATCAGCTTAGTGGAAGGGATAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS CCA 90 bp | CTTGAGGCACCGGTAGGTAGACGATCTACACATGATCCGGCGCCCTaGGATGTGTATGCGTGTGGGAAGCCCCTCAAACCAGACCAACTG | + |
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Preference number: 5 (lower is better) Translates to: LEAPVGRRSTHDPAP*DVYACGKPLKPDQL Trigger: CAGTTGGTCTGGTTTGAGGGGCTTCCCACACGCATACACATCCCAGGGCGCCGGATCATGTGTAGATCGTCTACCTACCGGTGCCTCAAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS CCA 90 bp | CCTGGGATGTGTATGCGTGTGGGAAGCCCCTCAAACCAGACCAACTaGTCAGTTATATCCAGTGCCTTCATCTTCCCCATGGTAGTGCTG | + |
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Preference number: 5 (lower is better) Translates to: PGMCMRVGSPSNQTN*SVISSAFIFPMVVL Trigger: CAGCACTACCATGGGGAAGATGAAGGCACTGGATATAACTGACCAGTTGGTCTGGTTTGAGGGGCTTCCCACACGCATACACATCCCAGG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS TCA 90 bp | CTTGTCCCTAGAAGAGATTTGCAGGATCTTTGGAACTCTGAGCATTaGATTCCAGCACCTTCTGGCCAGCTTATGGAGTTCTTGGATCCG | + |
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Preference number: 5 (lower is better) Translates to: LVPRRDLQDLWNSEH*IPAPSGQLMEFLDP Trigger: CGGATCCAAGAACTCCATAAGCTGGCCAGAAGGTGCTGGAATTCAATGCTCAGAGTTCCAAAGATCCTGCAAATCTCTTCTAGGGACAAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS GCA 90 bp | CGATTCCGCTCAATCACTTTGCTCACATGCTGGGTTATCTTGTCCTaGAGTTTCTCATCTTGCATCTTAGAAGGCACTTTATCCCTCGGC | + |
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Preference number: 5 (lower is better) Translates to: RFRSITLLTCWVILS*SFSSCILEGTLSLG Trigger: GCCGAGGGATAAAGTGCCTTCTAAGATGCAAGATGAGAAACTGCAGGACAAGATAACCCAGCATGTGAGCAAAGTGATTGAGCGGAATCG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS CCA 90 bp | CTGAGCATTGAATTCCAGCACCTTCTGGCCAGCTTATGGAGTTCTTaGATCCGGCTATTTGAGCTCTTGAATAGCTTCAAGAGGGACAAG | + |
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Preference number: 5 (lower is better) Translates to: LSIEFQHLLASLWSS*IRLFELLNSFKRDK Trigger: CTTGTCCCTCTTGAAGCTATTCAAGAGCTCAAATAGCCGGATCCAAGAACTCCATAAGCTGGCCAGAAGGTGCTGGAATTCAATGCTCAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR CAA 90 bp | GCCATAGGGGAGATTTTATTTGTAGACTTGCGACTGTCTTGCCTATCCCTTCCATTCCGCTCAATCACTTaGCTCACATGCTGGGTTATC | + |
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Preference number: 5 (lower is better) Translates to: AIGEILFVDLRLSCLSLPFRSIT*LTCWVI Trigger: GATAACCCAGCATGTGAGCAAAGTGATTGAGCGGAA...TGGAAGGGATAGGCAAGACAGTCGCAAGTCTACAAATAAAATCTCCCCTATGGC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS CCA 90 bp | TTTGGAACTCTGAGCATTGAATTCCAGCACCTTCTGGCCAGCTTATaGAGTTCTTGGATCCGGCTATTTGAGCTCTTGAATAGCTTCAAG | + |
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Preference number: 5 (lower is better) Translates to: FGTLSIEFQHLLASL*SSWIRLFELLNSFK Trigger: CTTGAAGCTATTCAAGAGCTCAAATAGCCGGATCCAAGAACTCCATAAGCTGGCCAGAAGGTGCTGGAATTCAATGCTCAGAGTTCCAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR CAA 90 bp | GCGACTGTCTTGCCTATCCCTTCCACTAAGCTGATAGCACGATCTCTACTTCTTTGTTTCACTTTGTCCTaGTCCCTAGAAGAGATTTGC | + |
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Preference number: 5 (lower is better) Translates to: ATVLPIPSTKLIARSLLLCFTLS*SLEEIC Trigger: GCAAATCTCTTCTAGGGACAAGGACAAAGTGAAACA...AAGAAGTAGAGATCGTGCTATCAGCTTAGTGGAAGGGATAGGCAAGACAGTCGC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS GCA 90 bp | ACTTTGCTCACATGCTGGGTTATCTTGTCCTGCAGTTTCTCATCTTaGATCTTAGAAGGCACTTTATCCCTCGGCCTCTTCTTTGTAGAT | + |
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Preference number: 5 (lower is better) Translates to: TLLTCWVILSCSFSS*ILEGTLSLGLFFVD Trigger: ATCTACAAAGAAGAGGCCGAGGGATAAAGTGCCTTCTAAGATGCAAGATGAGAAACTGCAGGACAAGATAACCCAGCATGTGAGCAAAGT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR CAA 90 bp | CCTATCCCTTCCACTAAGCTGATAGCACGATCTCTACTTCTTACAATTCAAGTTCCCTTAGATCCTTGCTaGGGCTTCCACTTTTTGGAT | + |
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Preference number: 5 (lower is better) Translates to: PIPSTKLIARSLLLTIQVPLDPC*GFHFLD Trigger: ATCCAAAAAGTGGAAGCCCAAGCAAGGATCTAAGGG...AACTTGAATTGTAAGAAGTAGAGATCGTGCTATCAGCTTAGTGGAAGGGATAGG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS CCA 90 bp | AATACCATTTTAAGTCGATTCCGCTCAATCACTTTGCTCACATGCTaGGTTATCTTGTCCTGCAGTTTCTCATCTTGCATCTTAGAAGGC | + |
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Preference number: 5 (lower is better) Translates to: NTILSRFRSITLLTC*VILSCSFSSCILEG Trigger: GCCTTCTAAGATGCAAGATGAGAAACTGCAGGACAAGATAACCCAGCATGTGAGCAAAGTGATTGAGCGGAATCGACTTAAAATGGTATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR CAA 90 bp | ATCCCTTCCACTAAGCTGATAGCACGATCTCTACTTCTTACAATTCAAGTTCCCCTGCAGTTTCTCATCTaGCATCTTAGAAGGCACTTT | + |
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Preference number: 5 (lower is better) Translates to: IPSTKLIARSLLLTIQVPLQFLI*HLRRHF Trigger: AAAGTGCCTTCTAAGATGCAAGATGAGAAACTGCAG...GGGAACTTGAATTGTAAGAAGTAGAGATCGTGCTATCAGCTTAGTGGAAGGGAT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR CAA 90 bp | GTCTTGCCTATCCCTTCCACTAAGCTGATAGCACGATCTCTACTTCTTACAATTCTTTTTGGATGTTTTTaGCTTGGGTTCCTTTACGGA | + |
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Preference number: 5 (lower is better) Translates to: VLPIPSTKLIARSLLLTILFGCF*LGFLYG Trigger: TCCGTAAAGGAACCCAAGCAAAAAACATCCAAAAAG...AATTGTAAGAAGTAGAGATCGTGCTATCAGCTTAGTGGAAGGGATAGGCAAGAC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS-3UTR CAA 90 bp | ATCCCTTCCACTAAGCTGATAGCACGATCTCTACTTCTTACAATTCAAGTTCCCTTATTTTGTTTCACTTaGTCCTTGTCCCTAGAAGAG | + |
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Preference number: 5 (lower is better) Translates to: IPSTKLIARSLLLTIQVPLFCFT*SLSLEE Trigger: CTCTTCTAGGGACAAGGACAAAGTGAAACAAAATAA...GGGAACTTGAATTGTAAGAAGTAGAGATCGTGCTATCAGCTTAGTGGAAGGGAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS GCA 90 bp | TTTAATACCATTTTAAGTCGATTCCGCTCAATCACTTTGCTCACATaGTGGGTTATCTTGTCCTGCAGTTTCTCATCTTGCATCTTAGAA | + |
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Preference number: 5 (lower is better) Translates to: FNTILSRFRSITLLT*WVILSCSFSSCILE Trigger: TTCTAAGATGCAAGATGAGAAACTGCAGGACAAGATAACCCAGCATGTGAGCAAAGTGATTGAGCGGAATCGACTTAAAATGGTATTAAA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS CCA 72 bp | CCGGTAGGTAGACGATCTACACATGATCCGGCGCCCTaGGATGTGTATGCGTGTGGGAAGCCCCTCAAACCA | + |
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Preference number: 6 (lower is better) Translates to: PVGRRSTHDPAP*DVYACGKPLKP Trigger: TGGTTTGAGGGGCTTCCCACACGCATACACATCCCAGGGCGCCGGATCATGTGTAGATCGTCTACCTACCGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS CCA 72 bp | TGTATGCGTGTGGGAAGCCCCTCAAACCAGACCAACTaGTCAGTTATATCCAGTGCCTTCATCTTCCCCATG | + |
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Preference number: 6 (lower is better) Translates to: CMRVGSPSNQTN*SVISSAFIFPM Trigger: CATGGGGAAGATGAAGGCACTGGATATAACTGACCAGTTGGTCTGGTTTGAGGGGCTTCCCACACGCATACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS GCA 72 bp | CCCCTCAAACCAGACCAACTGGTCAGTTATATCCAGTaGCTTCATCTTCCCCATGGTAGTGCTGTGATGGTA | + |
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Preference number: 6 (lower is better) Translates to: PLKPDQLVSYIQ*LHLPHGSAVMV Trigger: TACCATCACAGCACTACCATGGGGAAGATGAAGGCACTGGATATAACTGACCAGTTGGTCTGGTTTGAGGGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS CAA 90 bp | AACTCGGGGCTTCTTAACGTAGGTCTTCCTCTTCTGGGCCCTGGCTaGCAAGCCACCACTCTTTATTACCTTGGAGATTTTAAATGTTTC | + |
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Preference number: 6 (lower is better) Translates to: NSGLLNVGLPLLGPG*QATTLYYLGDFKCF Trigger: GAAACATTTAAAATCTCCAAGGTAATAAAGAGTGGTGGCTTGCAAGCCAGGGCCCAGAAGAGGAAGACCTACGTTAAGAAGCCCCGAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS CCA 72 bp | GAATTCCAGCACCTTCTGGCCAGCTTATGGAGTTCTTaGATCCGGCTATTTGAGCTCTTGAATAGCTTCAAG | + |
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Preference number: 6 (lower is better) Translates to: EFQHLLASLWSS*IRLFELLNSFK Trigger: CTTGAAGCTATTCAAGAGCTCAAATAGCCGGATCCAAGAACTCCATAAGCTGGCCAGAAGGTGCTGGAATTC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS CCA 72 bp | CTGAGCATTGAATTCCAGCACCTTCTGGCCAGCTTATaGAGTTCTTGGATCCGGCTATTTGAGCTCTTGAAT | + |
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Preference number: 6 (lower is better) Translates to: LSIEFQHLLASL*SSWIRLFELLN Trigger: ATTCAAGAGCTCAAATAGCCGGATCCAAGAACTCCATAAGCTGGCCAGAAGGTGCTGGAATTCAATGCTCAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS CAA 72 bp | CACATGCTGGGTTATCTTGTCCTGCAGTTTCTCATCTaGCATCTTAGAAGGCACTTTATCCCTCGGCCTCTT | + |
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Preference number: 6 (lower is better) Translates to: HMLGYLVLQFLI*HLRRHFIPRPL Trigger: AAGAGGCCGAGGGATAAAGTGCCTTCTAAGATGCAAGATGAGAAACTGCAGGACAAGATAACCCAGCATGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS CAA 72 bp | CTTCTTAACGTAGGTCTTCCTCTTCTGGGCCCTGGCTaGCAAGCCACCACTCTTTATTACCTTGGAGATTTT | + |
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Preference number: 6 (lower is better) Translates to: LLNVGLPLLGPG*QATTLYYLGDF Trigger: AAAATCTCCAAGGTAATAAAGAGTGGTGGCTTGCAAGCCAGGGCCCAGAAGAGGAAGACCTACGTTAAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS CAA 90 bp | CACTTTGCTCACATGCTGGGTTATCTTGTCCTGCAGTTTCTCATCTaGCATCTTAGAAGGCACTTTATCCCTCGGCCTCTTCTTTGTAGA | + |
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Preference number: 6 (lower is better) Translates to: HFAHMLGYLVLQFLI*HLRRHFIPRPLLCR Trigger: TCTACAAAGAAGAGGCCGAGGGATAAAGTGCCTTCTAAGATGCAAGATGAGAAACTGCAGGACAAGATAACCCAGCATGTGAGCAAAGTG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS GCA 72 bp | ATTTTAAGTCGATTCCGCTCAATCACTTTGCTCACATaGTGGGTTATCTTGTCCTGCAGTTTCTCATCTTGC | + |
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Preference number: 6 (lower is better) Translates to: ILSRFRSITLLT*WVILSCSFSSC Trigger: GCAAGATGAGAAACTGCAGGACAAGATAACCCAGCATGTGAGCAAAGTGATTGAGCGGAATCGACTTAAAAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS GCA 72 bp | TCAATCACTTTGCTCACATGCTGGGTTATCTTGTCCTaGAGTTTCTCATCTTGCATCTTAGAAGGCACTTTA | + |
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Preference number: 6 (lower is better) Translates to: SITLLTCWVILS*SFSSCILEGTL Trigger: TAAAGTGCCTTCTAAGATGCAAGATGAGAAACTGCAGGACAAGATAACCCAGCATGTGAGCAAAGTGATTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS CCA 72 bp | CTTGGGTTCCTTTACGGACTCTGCCTTCTTAGAATTTaGTCTCATTTCAAGGACCCTAATCTCTTGGAATTT | + |
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Preference number: 6 (lower is better) Translates to: LGFLYGLCLLRI*SHFKDPNLLEF Trigger: AAATTCCAAGAGATTAGGGTCCTTGAAATGAGACCAAATTCTAAGAAGGCAGAGTCCGTAAAGGAACCCAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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| CDS CAA 72 bp | TTTAATACCATTTTAAGTCGATTCCGCTCAATCACTTaGCTCACATGCTGGGTTATCTTGTCCTGCAGTTTC | + |
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Preference number: 6 (lower is better) Translates to: FNTILSRFRSIT*LTCWVILSCSF Trigger: GAAACTGCAGGACAAGATAACCCAGCATGTGAGCAAAGTGATTGAGCGGAATCGACTTAAAATGGTATTAAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000017864.3 |
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