Pregenerated sensors for TRP53RKB (Mus musculus)
Ensembl gene IDs: ENSMUSG00000042854Ensembl transcript IDs: ENSMUST00000065753.2, ENSMUST00000151826.2
Found 120 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | CAGCAGACTCCCCTTATTCTCCAGTCACCATGCTGGACAACAGCCTaGCTGCCTTCCTGGGTGTCCCTGAGGCAGCTCAGCTGCTCTCCC | + |
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Preference number: 1 (lower is better) Translates to: QQTPLILQSPCWTTA*LPSWVSLRQLSCSP Trigger: GGGAGAGCAGCTGAGCTGCCTCAGGGACACCCAGGAAGGCAGCCAGGCTGTTGTCCAGCATGGTGACTGGAGAATAAGGGGAGTCTGCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR GCA 90 bp | CTGGGTCTGGAGTTCATCTCTGCCACACAAGTCTGTAGGAAGCCTTaGTGGCCTGATCCCCAGTCCCCACACTCCCATGCAGAACTGTCT | + |
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Preference number: 1 (lower is better) Translates to: LGLEFISATQVCRKP*WPDPQSPHSHAELS Trigger: AGACAGTTCTGCATGGGAGTGTGGGGACTGGGGATCAGGCCAGCAAGGCTTCCTACAGACTTGTGTGGCAGAGATGAACTCCAGACCCAG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR TCA 90 bp | GAGTTGGGTGTAAGCAAGCCAGGGGACACAGGAGAAGCTGGCTTCTaGAGGGAACCCTGGGCTCAGGCTTTAGATTGTATCGTCACGAGA | + |
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Preference number: 1 (lower is better) Translates to: ELGVSKPGDTGEAGF*REPWAQALDCIVTR Trigger: TCTCGTGACGATACAATCTAAAGCCTGAGCCCAGGGTTCCCTTCAGAAGCCAGCTTCTCCTGTGTCCCCTGGCTTGCTTACACCCAACTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR TCA 90 bp | GGTATCGTCCACCTCCCTCCCTCCCTCTCCATAGACTGTAGTCCTTaGAGATGTTCCTGTGTTGGCTTTCCCACTTCATGGTATCCTGGG | + |
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Preference number: 1 (lower is better) Translates to: GIVHLPPSLSIDCSP*RCSCVGFPTSWYPG Trigger: CCCAGGATACCATGAAGTGGGAAAGCCAACACAGGAACATCTTCAAGGACTACAGTCTATGGAGAGGGAGGGAGGGAGGTGGACGATACC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR CCA 90 bp | CTCATGTACATGAAGCCCCTGAGAACAGTGAGCCATGGATGGTGGTaGCCCAGCACGATCACAGACCACTTAACAACCCATGCTTTGCTG | + |
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Preference number: 1 (lower is better) Translates to: LMYMKPLRTVSHGWW*PSTITDHLTTHALL Trigger: CAGCAAAGCATGGGTTGTTAAGTGGTCTGTGATCGTGCTGGGCCACCACCATCCATGGCTCACTGTTCTCAGGGGCTTCATGTACATGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR CCA 90 bp | AACCTCATGTACATGAAGCCCCTGAGAACAGTGAGCCATGGATGGTaGTGGCCCAGCACGATCACAGACCACTTAACAACCCATGCTTTG | + |
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Preference number: 1 (lower is better) Translates to: NLMYMKPLRTVSHGW*WPSTITDHLTTHAL Trigger: CAAAGCATGGGTTGTTAAGTGGTCTGTGATCGTGCTGGGCCACCACCATCCATGGCTCACTGTTCTCAGGGGCTTCATGTACATGAGGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR TCA 90 bp | GTTGAAAGATTCATCGGAGTTCCTGGAAAGCCAGGCGATGGATGCTaGGAAGCACATCTCAGCCTTCAGGAGACAGAGTCCAGCTCCTTT | + |
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Preference number: 1 (lower is better) Translates to: VERFIGVPGKPGDGC*EAHLSLQETESSSF Trigger: AAAGGAGCTGGACTCTGTCTCCTGAAGGCTGAGATGTGCTTCTCAGCATCCATCGCCTGGCTTTCCAGGAACTCCGATGAATCTTTCAAC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR CCA 90 bp | ATAAACCTCATGTACATGAAGCCCCTGAGAACAGTGAGCCATGGATaGTGGTGGCCCAGCACGATCACAGACCACTTAACAACCCATGCT | + |
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Preference number: 1 (lower is better) Translates to: INLMYMKPLRTVSHG*WWPSTITDHLTTHA Trigger: AGCATGGGTTGTTAAGTGGTCTGTGATCGTGCTGGGCCACCACCATCCATGGCTCACTGTTCTCAGGGGCTTCATGTACATGAGGTTTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR CCA 90 bp | CAGAATAAACCTCATGTACATGAAGCCCCTGAGAACAGTGAGCCATaGATGGTGGTGGCCCAGCACGATCACAGACCACTTAACAACCCA | + |
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Preference number: 1 (lower is better) Translates to: QNKPHVHEAPENSEP*MVVAQHDHRPLNNP Trigger: TGGGTTGTTAAGTGGTCTGTGATCGTGCTGGGCCACCACCATCCATGGCTCACTGTTCTCAGGGGCTTCATGTACATGAGGTTTATTCTG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR TCA 90 bp | ATTGAACTCAGGACCTCTGGAAGAACAGTCAGTGATCTTAACTGCTaGGCCATCTCTCCAGCCCGTCATGGTGTTGTTTGCCCATCTCTT | + |
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Preference number: 1 (lower is better) Translates to: IELRTSGRTVSDLNC*AISPARHGVVCPSL Trigger: AAGAGATGGGCAAACAACACCATGACGGGCTGGAGAGATGGCTCAGCAGTTAAGATCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR TCA 90 bp | CATGCCACTGGGGTTCAGAGCAGGTTCAAAGCAGCAGCATTACTGTaGATGGACTTGAGGATTCTCTTCAAGGTAAGAGTTATGTCTGGT | + |
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Preference number: 1 (lower is better) Translates to: HATGVQSRFKAAALL*MDLRILFKVRVMSG Trigger: ACCAGACATAACTCTTACCTTGAAGAGAATCCTCAAGTCCATTCACAGTAATGCTGCTGCTTTGAACCTGCTCTGAACCCCAGTGGCATG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR TCA 90 bp | TCATGGTGTTGTTTGCCCATCTCTTCCTTGTTCCATCTTTGTCCCTaGTCATCAGACTTCACTGCCAAGTTGACTGGATTTGGGATCTCC | + |
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Preference number: 1 (lower is better) Translates to: SWCCLPISSLFHLCP*SSDFTAKLTGFGIS Trigger: GGAGATCCCAAATCCAGTCAACTTGGCAGTGAAGTCTGATGATCAGGGACAAAGATGGAACAAGGAAGAGATGGGCAAACAACACCATGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR GCA 90 bp | GTTATCTTCAGACATACTAGGAAAAGGCATTACAGATCATGCGGTTaGTGGGAATTGAACTCAGGACCTCTGGAAGAACAGTCAGTGATC | + |
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Preference number: 1 (lower is better) Translates to: VIFRHTRKRHYRSCG*WELNSGPLEEQSVI Trigger: GATCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCGCATGATCTGTAATGCCTTTTCCTAGTATGTCTGAAGATAAC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR CCA 90 bp | ATCTTCAGACATACTAGGAAAAGGCATTACAGATCATGCGGTTGCTaGGAATTGAACTCAGGACCTCTGGAAGAACAGTCAGTGATCTTA | + |
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Preference number: 1 (lower is better) Translates to: IFRHTRKRHYRSCGC*ELNSGPLEEQSVIL Trigger: TAAGATCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCGCATGATCTGTAATGCCTTTTCCTAGTATGTCTGAAGAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR CAA 90 bp | AGGAGAAGCTGGCTTCTGAAGGGAACCCTGGGCTCAGGCTTTAGATaGTATCGTCACGAGAGCCCTGCCCTACGCAACGTCAGCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: RRSWLLKGTLGSGFR*YRHESPALRNVSPP Trigger: TGGAGGGCTGACGTTGCGTAGGGCAGGGCTCTCGTGACGATACAATCTAAAGCCTGAGCCCAGGGTTCCCTTCAGAAGCCAGCTTCTCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR TCA 90 bp | TGTTCGAGGGATGTTGGATGCCCTGGAGTTGGGGTCACAGGTGGCTTTGAGTTAGAAGCCTTGCTGGCCTaGTCCCCAGTCCCCACACTC | + |
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Preference number: 2 (lower is better) Translates to: CSRDVGCPGVGVTGGFELEALLA*SPVPTL Trigger: GAGTGTGGGGACTGGGGATCAGGCCAGCAAGGCTTC...TAACTCAAAGCCACCTGTGACCCCAACTCCAGGGCATCCAACATCCCTCGAACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR TCA 90 bp | GCAACAGACTGCTCCAAAAGTACCAAGCCTGGAGGAGATGCAGGTCCTCTCTGGCAACCCATGCTTTGCTaGGGGGTCCAGCCTCGTCTA | + |
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Preference number: 2 (lower is better) Translates to: ATDCSKSTKPGGDAGPLWQPMLC*GVQPRL Trigger: TAGACGAGGCTGGACCCCTCAGCAAAGCATGGGTTG...CCAGAGAGGACCTGCATCTCCTCCAGGCTTGGTACTTTTGGAGCAGTCTGTTGC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR GCA 90 bp | CTAGATGCCATCTCTCTGCTCCCATCCATCTACGGAAGCCTCCAGAACTTACTCCACACACCCCTCCCATaGCACTGGGGTTCAGAGCAG | + |
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Preference number: 2 (lower is better) Translates to: LDAISLLPSIYGSLQNLLHTPLP*HWGSEQ Trigger: CTGCTCTGAACCCCAGTGGCATGGGAGGGGTGTGTG...GAGTAAGTTCTGGAGGCTTCCGTAGATGGATGGGAGCAGAGAGATGGCATCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR CCA 90 bp | TGTTCGAGGGATGTTGGATGCCCTGGAGTTGGGGTCACAGGTGGCTTTGAGTTAACAGTGAGCCATGGATaGTGGTGGCCCAGCACGATC | + |
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Preference number: 2 (lower is better) Translates to: CSRDVGCPGVGVTGGFELTVSHG*WWPSTI Trigger: GATCGTGCTGGGCCACCACCATCCATGGCTCACTGT...TAACTCAAAGCCACCTGTGACCCCAACTCCAGGGCATCCAACATCCCTCGAACA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR CAA 90 bp | AGTGCAGGCATCAGTGGTGTTCGAGGGATGTTGGATGCCCTGGAGTaGGGGTCACAGGTGGCTTTGAGTTATCCAAGGTGGGATTGGGAA | + |
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Preference number: 2 (lower is better) Translates to: SAGISGVRGMLDALE*GSQVALSYPRWDWE Trigger: TTCCCAATCCCACCTTGGATAACTCAAAGCCACCTGTGACCCCAACTCCAGGGCATCCAACATCCCTCGAACACCACTGATGCCTGCACT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR TCA 90 bp | GTCTGTAGGAAGCCTTGCTGGCCTGATCCCCAGTCCCCACACTCCCATGCAGAACCAAGCCTAATCACCTaGACTCAATCCCTGAAATCC | + |
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Preference number: 2 (lower is better) Translates to: VCRKPCWPDPQSPHSHAEPSLIT*TQSLKS Trigger: GGATTTCAGGGATTGAGTTCAGGTGATTAGGCTTGG...TTCTGCATGGGAGTGTGGGGACTGGGGATCAGGCCAGCAAGGCTTCCTACAGAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGAACAGTCAGTGATCTTAACTGCTGAGCCATCTCTCCAGCCCGTCATGGTGCAAGCCTGGAGGAGATaGAGGTCCTCTCTGGTCTGC | + |
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Preference number: 2 (lower is better) Translates to: EEQSVILTAEPSLQPVMVQAWRR*RSSLVC Trigger: GCAGACCAGAGAGGACCTGCATCTCCTCCAGGCTTG...CACCATGACGGGCTGGAGAGATGGCTCAGCAGTTAAGATCACTGACTGTTCTTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR CCA 90 bp | CTAGATGCCATCTCTCTGCTCCCATCCATCTACGGAAGCCTCCAGAACTTACTCGAGAACAGTGAGCCATaGATGGTGGTGGCCCAGCAC | + |
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Preference number: 2 (lower is better) Translates to: LDAISLLPSIYGSLQNLLENSEP*MVVAQH Trigger: GTGCTGGGCCACCACCATCCATGGCTCACTGTTCTC...GAGTAAGTTCTGGAGGCTTCCGTAGATGGATGGGAGCAGAGAGATGGCATCTAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR CAA 90 bp | TCCCTGGAACTGGAGTTGCAGACAGTTGTGAGCTGCTATGTGGTGTaGGGAAGTGAATCCAGGTCCTCTGGAAGAACAGCCGGTGCTCTT | + |
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Preference number: 2 (lower is better) Translates to: SLELELQTVVSCYVV*GSESRSSGRTAGAL Trigger: AAGAGCACCGGCTGTTCTTCCAGAGGACCTGGATTCACTTCCCAACACCACATAGCAGCTCACAACTGTCTGCAACTCCAGTTCCAGGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR TCA 90 bp | CTAGATGCCATCTCTCTGCTCCCATCCATCTACGGAAGCCTCCAGAACTTACTCCATCATCCTTCACCGTaGGCCAGTTCACCACAGCTC | + |
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Preference number: 2 (lower is better) Translates to: LDAISLLPSIYGSLQNLLHHPSP*ASSPQL Trigger: GAGCTGTGGTGAACTGGCTCACGGTGAAGGATGATG...GAGTAAGTTCTGGAGGCTTCCGTAGATGGATGGGAGCAGAGAGATGGCATCTAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR CCA 90 bp | GTCTGTAGGAAGCCTTGCTGGCCTGATCCCCAGTCCCCACACTCCCATGCAGAACTAGAAACTACATGGTaGCTCACAACCACCCGTAAT | + |
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Preference number: 2 (lower is better) Translates to: VCRKPCWPDPQSPHSHAELETTW*LTTTRN Trigger: ATTACGGGTGGTTGTGAGCCACCATGTAGTTTCTAG...TTCTGCATGGGAGTGTGGGGACTGGGGATCAGGCCAGCAAGGCTTCCTACAGAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR CCA 90 bp | GACTGCTCCAAAAGTACCAAGCCTGGAGGAGATGCAGGTCCTCTCTGGTCTGCTGGCTTTCCCACTTCATaGTATCCTGGGGGAAAACAC | + |
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Preference number: 2 (lower is better) Translates to: DCSKSTKPGGDAGPLWSAGFPTS*YPGGKH Trigger: GTGTTTTCCCCCAGGATACCATGAAGTGGGAAAGCC...AGCAGACCAGAGAGGACCTGCATCTCCTCCAGGCTTGGTACTTTTGGAGCAGTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR GCA 90 bp | GCAACAGACTGCTCCAAAAGTACCAAGCCTGGAGGAGATGCAGGTCCTCTCTGGTTCCCTTCCCTGGCATaGAGGTATACACGCAGAAAT | + |
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Preference number: 2 (lower is better) Translates to: ATDCSKSTKPGGDAGPLWFPSLA*RYTRRN Trigger: ATTTCTGCGTGTATACCTGCATGCCAGGGAAGGGAA...CCAGAGAGGACCTGCATCTCCTCCAGGCTTGGTACTTTTGGAGCAGTCTGTTGC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR CCA 90 bp | CCCATCCCCAGCAGACTCCCCTTATTCTCCAGTCACCATGCTGGACAACAGCCTTTGAGTTATCCAAGGTaGGATTGGGAACTAAGGTCC | + |
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Preference number: 2 (lower is better) Translates to: PIPSRLPLFSSHHAGQQPLSYPR*DWELRS Trigger: GGACCTTAGTTCCCAATCCCACCTTGGATAACTCAA...AGGCTGTTGTCCAGCATGGTGACTGGAGAATAAGGGGAGTCTGCTGGGGATGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR TCA 90 bp | GAGCAGGTTCAAAGCAGCAGCATTACTGTGAATGGACTTGAGGATTCTCTTCAAGGAGAAGCTGGCTTCTaGAGGGAACCCTGGGCTCAG | + |
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Preference number: 2 (lower is better) Translates to: EQVQSSSITVNGLEDSLQGEAGF*REPWAQ Trigger: CTGAGCCCAGGGTTCCCTTCAGAAGCCAGCTTCTCC...TTGAAGAGAATCCTCAAGTCCATTCACAGTAATGCTGCTGCTTTGAACCTGCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR CCA 90 bp | GAGGATTCTCTTCAAGGTAAGAGTTATGTCTGGTTTCACCACCCACCAGTTCAGAGCCATGGATGGTGGTaGCCCAGCACGATCACAGAC | + |
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Preference number: 2 (lower is better) Translates to: EDSLQGKSYVWFHHPPVQSHGWW*PSTITD Trigger: GTCTGTGATCGTGCTGGGCCACCACCATCCATGGCT...CTGAACTGGTGGGTGGTGAAACCAGACATAACTCTTACCTTGAAGAGAATCCTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR CCA 90 bp | GGTGTTCGAGGGATGTTGGATGCCCTGGAGTTGGGGTCACAGGTGGCTTTGAGTCAAAGTCAGGTATGGTaGCTTATAACCTCTTCCAAG | + |
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Preference number: 2 (lower is better) Translates to: GVRGMLDALELGSQVALSQSQVW*LITSSK Trigger: CTTGGAAGAGGTTATAAGCCACCATACCTGACTTTG...ACTCAAAGCCACCTGTGACCCCAACTCCAGGGCATCCAACATCCCTCGAACACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR CAA 90 bp | TGCCTGTACATCTGTGTGAAGGTGTCAGATTCCCTGGAACTGGAGTaGCAGACAGTTGTGAGCTGCTATGTGGTGTTGGGAAGTGAATCC | + |
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Preference number: 2 (lower is better) Translates to: CLYICVKVSDSLELE*QTVVSCYVVLGSES Trigger: GGATTCACTTCCCAACACCACATAGCAGCTCACAACTGTCTGCAACTCCAGTTCCAGGGAATCTGACACCTTCACACAGATGTACAGGCA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR TCA 90 bp | TCTTTGTCCCTGATCATCAGACTTCACTGCCAAGTTGACTGGATTTGGGATCTCACCCGTAATGGGATCTaGTTCCCTTCCCTGGCATGC | + |
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Preference number: 2 (lower is better) Translates to: SLSLIIRLHCQVDWIWDLTRNGI*FPSLAC Trigger: GCATGCCAGGGAAGGGAATCAGATCCCATTACGGGT...GAGATCCCAAATCCAGTCAACTTGGCAGTGAAGTCTGATGATCAGGGACAAAGA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGAACAGTCAGTGATCTTAACTGCTGAGCCATCTCTCCAGCCCGTCATGGTGAGGAAGACTGTTTCCTaGATCTCAGACTGGGGTATC | + |
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Preference number: 2 (lower is better) Translates to: EEQSVILTAEPSLQPVMVRKTVS*ISDWGI Trigger: GATACCCCAGTCTGAGATGCAGGAAACAGTCTTCCT...CACCATGACGGGCTGGAGAGATGGCTCAGCAGTTAAGATCACTGACTGTTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGAACAGTCAGTGATCTTAACTGCTGAGCCATCTCTCCAGCCCGTCATGGTGCAGACAGTTGTGAGCTaGTATGTGGTGTTGGGAAGT | + |
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Preference number: 2 (lower is better) Translates to: EEQSVILTAEPSLQPVMVQTVVS*YVVLGS Trigger: ACTTCCCAACACCACATAGCAGCTCACAACTGTCTG...CACCATGACGGGCTGGAGAGATGGCTCAGCAGTTAAGATCACTGACTGTTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR GCA 90 bp | TCTTTGTCCCTGATCATCAGACTTCACTGCCAAGTTGACTGGATTTGGGATCTCCTGAGGCAGCTCAGCTaGTCTCCCCACACCTTCAAA | + |
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Preference number: 2 (lower is better) Translates to: SLSLIIRLHCQVDWIWDLLRQLS*SPHTFK Trigger: TTTGAAGGTGTGGGGAGAGCAGCTGAGCTGCCTCAG...GAGATCCCAAATCCAGTCAACTTGGCAGTGAAGTCTGATGATCAGGGACAAAGA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGAACAGTCAGTGATCTTAACTGCTGAGCCATCTCTCCAGCCCGTCATGGTGCAATGCATGCTGCTCTaGCAAATGGCAGGACATGTA | + |
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Preference number: 2 (lower is better) Translates to: EEQSVILTAEPSLQPVMVQCMLL*QMAGHV Trigger: TACATGTCCTGCCATTTGCCAGAGCAGCATGCATTG...CACCATGACGGGCTGGAGAGATGGCTCAGCAGTTAAGATCACTGACTGTTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR CCA 90 bp | GAAGAACAGTCAGTGATCTTAACTGCTGAGCCATCTCTCCAGCCCGTCATGGTGTTCCTAGAAACTACATaGTGGCTCACAACCACCCGT | + |
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Preference number: 2 (lower is better) Translates to: EEQSVILTAEPSLQPVMVFLETT*WLTTTR Trigger: ACGGGTGGTTGTGAGCCACCATGTAGTTTCTAGGAA...CACCATGACGGGCTGGAGAGATGGCTCAGCAGTTAAGATCACTGACTGTTCTTC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR CAA 90 bp | CAGCCCGTCATGGTGTTGTTTGCCCATCTCTTCCTTGTTCCATCTTaGTCCCTGATCATCAGACTTCACTGCCAAGTTGACTGGATTTGG | + |
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Preference number: 2 (lower is better) Translates to: QPVMVLFAHLFLVPS*SLIIRLHCQVDWIW Trigger: CCAAATCCAGTCAACTTGGCAGTGAAGTCTGATGATCAGGGACAAAGATGGAACAAGGAAGAGATGGGCAAACAACACCATGACGGGCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR CAA 90 bp | TCAGTGATCTTAACTGCTGAGCCATCTCTCCAGCCCGTCATGGTGTaGTTTGCCCATCTCTTCCTTGTTCCATCTTTGTCCCTGATCATC | + |
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Preference number: 2 (lower is better) Translates to: SVILTAEPSLQPVMV*FAHLFLVPSLSLII Trigger: GATGATCAGGGACAAAGATGGAACAAGGAAGAGATGGGCAAACAACACCATGACGGGCTGGAGAGATGGCTCAGCAGTTAAGATCACTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR TCA 90 bp | GAAGAACAGTCAGTGATCTTAACTGCTGAGCCATCTCTCCAGCCCGTCATGGTGGGTTTCTTAAGAAAGTaGGTTGGGTGTAAGCAAGCC | + |
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Preference number: 2 (lower is better) Translates to: EEQSVILTAEPSLQPVMVGFLRK*VGCKQA Trigger: GGCTTGCTTACACCCAACTCACTTTCTTAAGAAACC...CACCATGACGGGCTGGAGAGATGGCTCAGCAGTTAAGATCACTGACTGTTCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR TCA 90 bp | GAGGATTCTCTTCAAGGTAAGAGTTATGTCTGGTTTCACCACCCACCAGTTCAGTGTGGTGTTGGGAAGTaGATCCAGGTCCTCTGGAAG | + |
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Preference number: 2 (lower is better) Translates to: EDSLQGKSYVWFHHPPVQCGVGK*IQVLWK Trigger: CTTCCAGAGGACCTGGATTCACTTCCCAACACCACA...CTGAACTGGTGGGTGGTGAAACCAGACATAACTCTTACCTTGAAGAGAATCCTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR GCA 90 bp | TATGACTTCCGATTAGAACTCGGGAAATTTAGGCAAGGCAACTCACAGAAGGGTGCCTGGCAGGACAGATaGTTAAAACTACCCAGGGCG | + |
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Preference number: 2 (lower is better) Translates to: YDFRLELGKFRQGNSQKGAWQDR*LKLPRA Trigger: CGCCCTGGGTAGTTTTAAGCATCTGTCCTGCCAGGC...ACCCTTCTGTGAGTTGCCTTGCCTAAATTTCCCGAGTTCTAATCGGAAGTCATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065753.2 |
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| 3UTR-3UTR GCA 90 bp | GAAGAACAGTCAGTGATCTTAACTGCTGAGCCATCTCTCCAGCCCGTCATGGTGCAGAAAAAGCATATGTaGTGCCTTTCCACAGGACCA | + |
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Preference number: 2 (lower is better) Translates to: EEQSVILTAEPSLQPVMVQKKHM*CLSTGP Trigger: TGGTCCTGTGGAAAGGCAGCACATATGCTTTTTCTG...CACCATGACGGGCTGGAGAGATGGCTCAGCAGTTAAGATCACTGACTGTTCTTC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR-3UTR GCA 90 bp | GAGCAGGTTCAAAGCAGCAGCATTACTGTGAATGGACTTGAGGATTCTCTTCAAGTCCCCACACTCCCATaGAGAACTGTCTCCTGCTCT | + |
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Preference number: 2 (lower is better) Translates to: EQVQSSSITVNGLEDSLQVPTLP*RTVSCS Trigger: AGAGCAGGAGACAGTTCTGCATGGGAGTGTGGGGAC...TTGAAGAGAATCCTCAAGTCCATTCACAGTAATGCTGCTGCTTTGAACCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR-3UTR CCA 90 bp | GAACTAAGGTCCTCAGCAAGAGCAGTATGTGCTCTTACTGAGCAAGACATTTCAGGACACAGGAGAAGCTaGCTTCTGAAGGGAACCCTG | + |
|
Preference number: 2 (lower is better) Translates to: ELRSSARAVCALTEQDISGHRRS*LLKGTL Trigger: CAGGGTTCCCTTCAGAAGCCAGCTTCTCCTGTGTCC...TGAAATGTCTTGCTCAGTAAGAGCACATACTGCTCTTGCTGAGGACCTTAGTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR CAA 90 bp | TGTCTGGTTTCACCACCCACCAGTTCAGCTGTCTTCTACTGGTCTTaGGGCCCCATTACACTGAAGACATGTCAGTCTAGGTATTTCAGA | + |
|
Preference number: 2 (lower is better) Translates to: CLVSPPTSSAVFYWS*GPITLKTCQSRYFR Trigger: TCTGAAATACCTAGACTGACATGTCTTCAGTGTAATGGGGCCCAAAGACCAGTAGAAGACAGCTGAACTGGTGGGTGGTGAAACCAGACA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGCAGGTTCAAAGCAGCAGCATTACTGTGAATGGACTTGAGGATTCTCTTCAATGCTGCTCTGGCAAATaGCAGGACATGTACACCAGG | + |
|
Preference number: 2 (lower is better) Translates to: EQVQSSSITVNGLEDSLQCCSGK*QDMYTR Trigger: CCTGGTGTACATGTCCTGCCATTTGCCAGAGCAGCA...TTGAAGAGAATCCTCAAGTCCATTCACAGTAATGCTGCTGCTTTGAACCTGCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR CAA 90 bp | CACTGCCAAGTTGACTGGATTTGGGATCTCCTGAGAGAGGCACCTTaGAGTGTCTGTGAAGATATTTCTAGGAAGGCTTCACTGAAAAGG | + |
|
Preference number: 2 (lower is better) Translates to: HCQVDWIWDLLREAP*SVCEDISRKASLKR Trigger: CCTTTTCAGTGAAGCCTTCCTAGAAATATCTTCACAGACACTCAAAGGTGCCTCTCTCAGGAGATCCCAAATCCAGTCAACTTGGCAGTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR-3UTR CCA 90 bp | TCTTTGTCCCTGATCATCAGACTTCACTGCCAAGTTGACTGGATTTGGGATCTCTACAGAGTGAGTTTCTaGGACAGCCAGAGCTACACA | + |
|
Preference number: 2 (lower is better) Translates to: SLSLIIRLHCQVDWIWDLYRVSF*DSQSYT Trigger: TGTGTAGCTCTGGCTGTCCCAGAAACTCACTCTGTA...GAGATCCCAAATCCAGTCAACTTGGCAGTGAAGTCTGATGATCAGGGACAAAGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR-3UTR CCA 90 bp | GAACTAAGGTCCTCAGCAAGAGCAGTATGTGCTCTTACTGAGCAAGACATTTCACAAAAGTACCAAGCCTaGAGGAGATGCAGGTCCTCT | + |
|
Preference number: 2 (lower is better) Translates to: ELRSSARAVCALTEQDISQKYQA*RRCRSS Trigger: AGAGGACCTGCATCTCCTCCAGGCTTGGTACTTTTG...TGAAATGTCTTGCTCAGTAAGAGCACATACTGCTCTTGCTGAGGACCTTAGTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR-3UTR TCA 90 bp | ACAGTTGTGAGCTGCTATGTGGTGTTGGGAAGTGAATCCAGGTCCTCTGGAAGAAAAAATTTAGGAAGCTaGAGAGATGGCTCAGCAGTT | + |
|
Preference number: 2 (lower is better) Translates to: TVVSCYVVLGSESRSSGRKNLGS*RDGSAV Trigger: AACTGCTGAGCCATCTCTTCAGCTTCCTAAATTTTT...TCTTCCAGAGGACCTGGATTCACTTCCCAACACCACATAGCAGCTCACAACTGT 46% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR-3UTR CCA 90 bp | GAGGATTCTCTTCAAGGTAAGAGTTATGTCTGGTTTCACCACCCACCAGTTCAGGTGCAAAGTCAGGTATaGTGGCTTATAACCTCTTCC | + |
|
Preference number: 2 (lower is better) Translates to: EDSLQGKSYVWFHHPPVQVQSQV*WLITSS Trigger: GGAAGAGGTTATAAGCCACCATACCTGACTTTGCAC...CTGAACTGGTGGGTGGTGAAACCAGACATAACTCTTACCTTGAAGAGAATCCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR CAA 90 bp | AGACATACTAGGAAAAGGCATTACAGATCATGCGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAACAGTCAGTGATCTTAACTGCT | + |
|
Preference number: 2 (lower is better) Translates to: RHTRKRHYRSCGCWE*NSGPLEEQSVILTA Trigger: AGCAGTTAAGATCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCGCATGATCTGTAATGCCTTTTCCTAGTATGTCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR-3UTR TCA 90 bp | GAACTAAGGTCCTCAGCAAGAGCAGTATGTGCTCTTACTGAGCAAGACATTTCAATAAAAATAGTTTTGTaGGCCAGTGAGATGGCTCGC | + |
|
Preference number: 2 (lower is better) Translates to: ELRSSARAVCALTEQDISIKIVL*ASEMAR Trigger: GCGAGCCATCTCACTGGCTCACAAAACTATTTTTAT...TGAAATGTCTTGCTCAGTAAGAGCACATACTGCTCTTGCTGAGGACCTTAGTTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR-3UTR GCA 90 bp | GAGCAGGTTCAAAGCAGCAGCATTACTGTGAATGGACTTGAGGATTCTCTTCAATGTGCATTGGTAATTTaGCTGTACATCTGTGTGAAG | + |
|
Preference number: 2 (lower is better) Translates to: EQVQSSSITVNGLEDSLQCALVI*LYICVK Trigger: CTTCACACAGATGTACAGGCAAATTACCAATGCACA...TTGAAGAGAATCCTCAAGTCCATTCACAGTAATGCTGCTGCTTTGAACCTGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR-3UTR TCA 90 bp | GACATTTATTGGATGTCATGCCAACATACACGTTTGTATAGGCCACTCACAACACAGAAGGGTATAATCTaGATTCAGAAAGCTAGCTCC | + |
|
Preference number: 2 (lower is better) Translates to: DIYWMSCQHTRLYRPLTTQKGII*IQKASS Trigger: GGAGCTAGCTTTCTGAATTCAGATTATACCCTTCTG...TGTTGTGAGTGGCCTATACAAACGTGTATGTTGGCATGACATCCAATAAATGTC 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065753.2 |
||
| 3UTR CAA 90 bp | GAAAGGACTAAACATGTAAATAAGTTTCAGGTAAACAGATATCTTTaGTTAGTAGGTGTTAGGGTTGAAAGATTCATCGGAGTTCCTGGA | + |
|
Preference number: 2 (lower is better) Translates to: ERTKHVNKFQVNRYL*LVGVRVERFIGVPG Trigger: TCCAGGAACTCCGATGAATCTTTCAACCCTAACACCTACTAACAAAAGATATCTGTTTACCTGAAACTTATTTACATGTTTAGTCCTTTC 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR CCA 72 bp | CCCCTTATTCTCCAGTCACCATGCTGGACAACAGCCTaGCTGCCTTCCTGGGTGTCCCTGAGGCAGCTCAGC | + |
|
Preference number: 3 (lower is better) Translates to: PLILQSPCWTTA*LPSWVSLRQLS Trigger: GCTGAGCTGCCTCAGGGACACCCAGGAAGGCAGCCAGGCTGTTGTCCAGCATGGTGACTGGAGAATAAGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR CCA 72 bp | CCCCAGCAGACTCCCCTTATTCTCCAGTCACCATGCTaGACAACAGCCTGGCTGCCTTCCTGGGTGTCCCTG | + |
|
Preference number: 3 (lower is better) Translates to: PQQTPLILQSPC*TTAWLPSWVSL Trigger: CAGGGACACCCAGGAAGGCAGCCAGGCTGTTGTCCAGCATGGTGACTGGAGAATAAGGGGAGTCTGCTGGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR GCA 72 bp | CATCCCCAGCAGACTCCCCTTATTCTCCAGTCACCATaGTGGACAACAGCCTGGCTGCCTTCCTGGGTGTCC | + |
|
Preference number: 3 (lower is better) Translates to: HPQQTPLILQSP*WTTAWLPSWVS Trigger: GGACACCCAGGAAGGCAGCCAGGCTGTTGTCCAGCATGGTGACTGGAGAATAAGGGGAGTCTGCTGGGGATG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR GCA 72 bp | TGGCTGCCTTCCTGGGTGTCCCTGAGGCAGCTCAGCTaGTCTCCCCACACCTTCAAATGGTGCCTTGTTTTG | + |
|
Preference number: 3 (lower is better) Translates to: WLPSWVSLRQLS*SPHTFKWCLVL Trigger: CAAAACAAGGCACCATTTGAAGGTGTGGGGAGAGCAGCTGAGCTGCCTCAGGGACACCCAGGAAGGCAGCCA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR GCA 72 bp | GAGTTCATCTCTGCCACACAAGTCTGTAGGAAGCCTTaGTGGCCTGATCCCCAGTCCCCACACTCCCATGCA | + |
|
Preference number: 3 (lower is better) Translates to: EFISATQVCRKP*WPDPQSPHSHA Trigger: TGCATGGGAGTGTGGGGACTGGGGATCAGGCCAGCAAGGCTTCCTACAGACTTGTGTGGCAGAGATGAACTC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR-3UTR CAA 90 bp | GGTGTTCGAGGGATGTTGGATGCCCTGGAGTTGGGGTCACAGGTGGCTTTGAGTAGCTGCTATGTGGTGTaGGGAAGTGAATCCAGGTCC | + |
|
Preference number: 3 (lower is better) Translates to: GVRGMLDALELGSQVALSSCYVV*GSESRS Trigger: GGACCTGGATTCACTTCCCAACACCACATAGCAGCT...ACTCAAAGCCACCTGTGACCCCAACTCCAGGGCATCCAACATCCCTCGAACACC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR GCA 72 bp | GAGTGCAGGCATCAGTGGTGTTCGAGGGATGTTGGATaGCCTGGAGTTGGGGTCACAGGTGGCTTTGAGTTA | + |
|
Preference number: 3 (lower is better) Translates to: ECRHQWCSRDVG*PGVGVTGGFEL Trigger: TAACTCAAAGCCACCTGTGACCCCAACTCCAGGGCATCCAACATCCCTCGAACACCACTGATGCCTGCACTC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR TCA 72 bp | GTAAGCAAGCCAGGGGACACAGGAGAAGCTGGCTTCTaGAGGGAACCCTGGGCTCAGGCTTTAGATTGTATC | + |
|
Preference number: 3 (lower is better) Translates to: VSKPGDTGEAGF*REPWAQALDCI Trigger: GATACAATCTAAAGCCTGAGCCCAGGGTTCCCTTCAGAAGCCAGCTTCTCCTGTGTCCCCTGGCTTGCTTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR TCA 72 bp | TCTCTGCAGCCTCGGGAGGTAGGTTTCTTAAGAAAGTaGGTTGGGTGTAAGCAAGCCAGGGGACACAGGAGA | + |
|
Preference number: 3 (lower is better) Translates to: SLQPREVGFLRK*VGCKQARGHRR Trigger: TCTCCTGTGTCCCCTGGCTTGCTTACACCCAACTCACTTTCTTAAGAAACCTACCTCCCGAGGCTGCAGAGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR GCA 72 bp | GATTCCCTGGAACTGGAGTTGCAGACAGTTGTGAGCTaGTATGTGGTGTTGGGAAGTGAATCCAGGTCCTCT | + |
|
Preference number: 3 (lower is better) Translates to: DSLELELQTVVS*YVVLGSESRSS Trigger: AGAGGACCTGGATTCACTTCCCAACACCACATAGCAGCTCACAACTGTCTGCAACTCCAGTTCCAGGGAATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR CCA 72 bp | GAGTTGGGGTCACAGGTGGCTTTGAGTTATCCAAGGTaGGATTGGGAACTAAGGTCCTCAGCAAGAGCAGTA | + |
|
Preference number: 3 (lower is better) Translates to: ELGSQVALSYPR*DWELRSSARAV Trigger: TACTGCTCTTGCTGAGGACCTTAGTTCCCAATCCCACCTTGGATAACTCAAAGCCACCTGTGACCCCAACTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR-3UTR CAA 90 bp | GAAGAACAGTCAGTGATCTTAACTGCTGAGCCATCTCTCCAGCCCGTCATGGTGAAATGGTGCCTTGTTTaGTTTTCTGGGGACAGGGTC | + |
|
Preference number: 3 (lower is better) Translates to: EEQSVILTAEPSLQPVMVKWCLV*FSGDRV Trigger: GACCCTGTCCCCAGAAAACAAAACAAGGCACCATTT...CACCATGACGGGCTGGAGAGATGGCTCAGCAGTTAAGATCACTGACTGTTCTTC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR TCA 72 bp | TGTCAGATTCCCTGGAACTGGAGTTGCAGACAGTTGTaGGCTGCTATGTGGTGTTGGGAAGTGAATCCAGGT | + |
|
Preference number: 3 (lower is better) Translates to: CQIPWNWSCRQL*AAMWCWEVNPG Trigger: ACCTGGATTCACTTCCCAACACCACATAGCAGCTCACAACTGTCTGCAACTCCAGTTCCAGGGAATCTGACA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR GCA 72 bp | CCTGCCTCTGCCTCCCGAGTGCTGGGATTAAACACATaGATCACCACTGCCCAGCTGAGAGATTTAAAAATA | + |
|
Preference number: 3 (lower is better) Translates to: PASASRVLGLNT*ITTAQLRDLKI Trigger: TATTTTTAAATCTCTCAGCTGGGCAGTGGTGATGCATGTGTTTAATCCCAGCACTCGGGAGGCAGAGGCAGG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR GCA 72 bp | CTTATAACCTCTTCCAAGCAAGCTGAGGTAGGATGTTaGCATAAATTCAAGGCTAGCCTGGGCTACCTACCC | + |
|
Preference number: 3 (lower is better) Translates to: LITSSKQAEVGC*HKFKASLGYLP Trigger: GGGTAGGTAGCCCAGGCTAGCCTTGAATTTATGGCAACATCCTACCTCAGCTTGCTTGGAAGAGGTTATAAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR CCA 72 bp | TCACAACCACCCGTAATGGGATCTGATTCCCTTCCCTaGCATGCAGGTATACACGCAGAAATAGTACTCACA | + |
|
Preference number: 3 (lower is better) Translates to: SQPPVMGSDSLP*HAGIHAEIVLT Trigger: TGTGAGTACTATTTCTGCGTGTATACCTGCATGCCAGGGAAGGGAATCAGATCCCATTACGGGTGGTTGTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR CCA 72 bp | CTGATCATCAGACTTCACTGCCAAGTTGACTGGATTTaGGATCTCCTGAGAGAGGCACCTTTGAGTGTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: LIIRLHCQVDWI*DLLREAPLSVC Trigger: ACAGACACTCAAAGGTGCCTCTCTCAGGAGATCCCAAATCCAGTCAACTTGGCAGTGAAGTCTGATGATCAG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR TCA 72 bp | GTGCCATTTGGATTATATGTAAAGGAGAGAGCTAGCTaGGCACTAGATGCCATCTCTCTGCTCCCATCCATC | + |
|
Preference number: 3 (lower is better) Translates to: VPFGLYVKERAS*ALDAISLLPSI Trigger: GATGGATGGGAGCAGAGAGATGGCATCTAGTGCTCAGCTAGCTCTCTCCTTTACATATAATCCAAATGGCAC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR TCA 72 bp | ATCTTTGTCCCTGATCATCAGACTTCACTGCCAAGTTaGCTGGATTTGGGATCTCCTGAGAGAGGCACCTTT | + |
|
Preference number: 3 (lower is better) Translates to: IFVPDHQTSLPS*LDLGSPERGTF Trigger: AAAGGTGCCTCTCTCAGGAGATCCCAAATCCAGTCAACTTGGCAGTGAAGTCTGATGATCAGGGACAAAGAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR GCA 72 bp | CTTGTTCCATCTTTGTCCCTGATCATCAGACTTCACTaGCAAGTTGACTGGATTTGGGATCTCCTGAGAGAG | + |
|
Preference number: 3 (lower is better) Translates to: LVPSLSLIIRLH*QVDWIWDLLRE Trigger: CTCTCTCAGGAGATCCCAAATCCAGTCAACTTGGCAGTGAAGTCTGATGATCAGGGACAAAGATGGAACAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR CCA 72 bp | GGACTTGAGGATTCTCTTCAAGGTAAGAGTTATGTCTaGTTTCACCACCCACCAGTTCAGCTGTCTTCTACT | + |
|
Preference number: 3 (lower is better) Translates to: GLEDSLQGKSYV*FHHPPVQLSST Trigger: AGTAGAAGACAGCTGAACTGGTGGGTGGTGAAACCAGACATAACTCTTACCTTGAAGAGAATCCTCAAGTCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCAGGTTCAAAGCAGCAGCATTACTGTGAATGGACTTGAGGATTCTCTTCAATCTCTAACAACCTTCTaGACACCTGTCCTGGCTTTT | + |
|
Preference number: 3 (lower is better) Translates to: EQVQSSSITVNGLEDSLQSLTTF*TPVLAF Trigger: AAAAGCCAGGACAGGTGTCAAGAAGGTTGTTAGAGA...TTGAAGAGAATCCTCAAGTCCATTCACAGTAATGCTGCTGCTTTGAACCTGCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR GCA 72 bp | ATCTTCAGACATACTAGGAAAAGGCATTACAGATCATaGGGTTGCTGGGAATTGAACTCAGGACCTCTGGAA | + |
|
Preference number: 3 (lower is better) Translates to: IFRHTRKRHYRS*GCWELNSGPLE Trigger: TTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCGCATGATCTGTAATGCCTTTTCCTAGTATGTCTGAAGAT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR CCA 72 bp | TTGTTTCTGACAGAATCAGTGCAAAGTCAGGTATGGTaGCTTATAACCTCTTCCAAGCAAGCTGAGGTAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LFLTESVQSQVW*LITSSKQAEVG Trigger: TCCTACCTCAGCTTGCTTGGAAGAGGTTATAAGCCACCATACCTGACTTTGCACTGATTCTGTCAGAAACAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR-3UTR CAA 90 bp | GAGCAGGTTCAAAGCAGCAGCATTACTGTGAATGGACTTGAGGATTCTCTTCAAATGTGCATTGGTAATTaGCCTGTACATCTGTGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: EQVQSSSITVNGLEDSLQMCIGN*PVHLCE Trigger: TTCACACAGATGTACAGGCAAATTACCAATGCACAT...TTGAAGAGAATCCTCAAGTCCATTCACAGTAATGCTGCTGCTTTGAACCTGCTC 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR TCA 72 bp | CACTATGAATTGCATCCTCTCCATCCCGGAGACAAATaGACCTTTCTATTGTTAGACCGACAAGAAAATATT | + |
|
Preference number: 3 (lower is better) Translates to: HYELHPLHPGDK*TFLLLDRQENI Trigger: AATATTTTCTTGTCGGTCTAACAATAGAAAGGTTCATTTGTCTCCGGGATGGAGAGGATGCAATTCATAGTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| CDS-3UTR CCA 90 bp | CTAGATGCCATCTCTCTGCTCCCATCCATCTACGGAAGCCTCCAGAACTTACTCACGGCCGCGCGGCCCTaGAAGCGGCCACGGAAAACG | + |
|
Preference number: 4 (lower is better) Translates to: LDAISLLPSIYGSLQNLLTAARP*KRPRKT Trigger: CGTTTTCCGTGGCCGCTTCCAGGGCCGCGCGGCCGT...GAGTAAGTTCTGGAGGCTTCCGTAGATGGATGGGAGCAGAGAGATGGCATCTAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR CAA 72 bp | TGGCTTCTGAAGGGAACCCTGGGCTCAGGCTTTAGATaGTATCGTCACGAGAGCCCTGCCCTACGCAACGTC | + |
|
Preference number: 4 (lower is better) Translates to: WLLKGTLGSGFR*YRHESPALRNV Trigger: GACGTTGCGTAGGGCAGGGCTCTCGTGACGATACAATCTAAAGCCTGAGCCCAGGGTTCCCTTCAGAAGCCA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR CAA 72 bp | AATGTGAGTGCAGGCATCAGTGGTGTTCGAGGGATGTaGGATGCCCTGGAGTTGGGGTCACAGGTGGCTTTG | + |
|
Preference number: 4 (lower is better) Translates to: NVSAGISGVRGM*DALELGSQVAL Trigger: CAAAGCCACCTGTGACCCCAACTCCAGGGCATCCAACATCCCTCGAACACCACTGATGCCTGCACTCACATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| CDS-3UTR CCA 90 bp | TTTATTGGATGTCATGCCAACATACACGTTTGTATAGGCCACTCACAACATCCCACGGCCGCGCGGCCCTaGAAGCGGCCACGGAAAACG | + |
|
Preference number: 4 (lower is better) Translates to: FIGCHANIHVCIGHSQHPTAARP*KRPRKT Trigger: CGTTTTCCGTGGCCGCTTCCAGGGCCGCGCGGCCGT...GGGATGTTGTGAGTGGCCTATACAAACGTGTATGTTGGCATGACATCCAATAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065753.2 |
||
| 3UTR CAA 72 bp | ATGTTGGATGCCCTGGAGTTGGGGTCACAGGTGGCTTaGAGTTATCCAAGGTGGGATTGGGAACTAAGGTCC | + |
|
Preference number: 4 (lower is better) Translates to: MLDALELGSQVA*SYPRWDWELRS Trigger: GGACCTTAGTTCCCAATCCCACCTTGGATAACTCAAAGCCACCTGTGACCCCAACTCCAGGGCATCCAACAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR CAA 72 bp | TCACCACCCACCAGTTCAGCTGTCTTCTACTGGTCTTaGGGCCCCATTACACTGAAGACATGTCAGTCTAGG | + |
|
Preference number: 4 (lower is better) Translates to: SPPTSSAVFYWS*GPITLKTCQSR Trigger: CCTAGACTGACATGTCTTCAGTGTAATGGGGCCCAAAGACCAGTAGAAGACAGCTGAACTGGTGGGTGGTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| CDS-3UTR CCA 90 bp | CTTCAAGAGGTCCTGAGTTCAATTCCTAGAAACTACATGGTGGCTCACAACCACTCTTCAGCACTGGACTaGACTTCTTGGACGAGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: LQEVLSSIPRNYMVAHNHSSALD*TSWTRP Trigger: GGGCCTCGTCCAAGAAGTCCAGTCCAGTGCTGAAGA...GTGGTTGTGAGCCACCATGTAGTTTCTAGGAATTGAACTCAGGACCTCTTGAAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| 3UTR CAA 72 bp | TTAACTGCTGAGCCATCTCTCCAGCCCGTCATGGTGTaGTTTGCCCATCTCTTCCTTGTTCCATCTTTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LTAEPSLQPVMV*FAHLFLVPSLS Trigger: GGACAAAGATGGAACAAGGAAGAGATGGGCAAACAACACCATGACGGGCTGGAGAGATGGCTCAGCAGTTAA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| CDS-3UTR CCA 90 bp | GAGCAGGTTCAAAGCAGCAGCATTACTGTGAATGGACTTGAGGATTCTCTTCAAAGGTCCAAGAGGCACTaGGGGTCCTTTTCAGTCTCC | + |
|
Preference number: 4 (lower is better) Translates to: EQVQSSSITVNGLEDSLQRSKRH*GSFSVS Trigger: GGAGACTGAAAAGGACCCCCAGTGCCTCTTGGACCT...TTGAAGAGAATCCTCAAGTCCATTCACAGTAATGCTGCTGCTTTGAACCTGCTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
||
| CDS-3UTR CCA 90 bp | AATAGAGTCATAGTTGTTTTGTTTCTGACAGAATCAGTGCAAAGTCAGGTATGGCCTGCCCCATCCTCCTaGCCAGGTCCAAGAGGCACT | + |
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Preference number: 4 (lower is better) Translates to: NRVIVVLFLTESVQSQVWPAPSS*PGPRGT Trigger: AGTGCCTCTTGGACCTGGCCAGGAGGATGGGGCAGG...CCATACCTGACTTTGCACTGATTCTGTCAGAAACAAAACAACTATGACTCTATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR CAA 72 bp | AGGAAAAGGCATTACAGATCATGCGGTTGCTGGGAATaGAACTCAGGACCTCTGGAAGAACAGTCAGTGATC | + |
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Preference number: 4 (lower is better) Translates to: RKRHYRSCGCWE*NSGPLEEQSVI Trigger: GATCACTGACTGTTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCGCATGATCTGTAATGCCTTTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR CAA 72 bp | GTTGACTGGATTTGGGATCTCCTGAGAGAGGCACCTTaGAGTGTCTGTGAAGATATTTCTAGGAAGGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: VDWIWDLLREAP*SVCEDISRKAS Trigger: TGAAGCCTTCCTAGAAATATCTTCACAGACACTCAAAGGTGCCTCTCTCAGGAGATCCCAAATCCAGTCAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| 3UTR CAA 72 bp | TCTGACATTTATTGGATGTCATGCCAACATACACGTTaGTATAGGCCACTCACAACATCCCCGAGATGCGAA | + |
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Preference number: 4 (lower is better) Translates to: SDIYWMSCQHTR*YRPLTTSPRCE Trigger: TTCGCATCTCGGGGATGTTGTGAGTGGCCTATACAAACGTGTATGTTGGCATGACATCCAATAAATGTCAGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000065753.2 |
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| CDS GCA 90 bp | GCGCGGCCCTGGAAGCGGCCACGGAAAACGCGCGCCTCGGCGCCCTaGTGCACCAGCTCTAGGCCGCTCAGGAAGAGGCGGCTCCGCTCG | + |
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Preference number: 5 (lower is better) Translates to: ARPWKRPRKTRASAP*CTSSRPLRKRRLRS Trigger: CGAGCGGAGCCGCCTCTTCCTGAGCGGCCTAGAGCTGGTGCAGCAGGGCGCCGAGGCGCGCGTTTTCCGTGGCCGCTTCCAGGGCCGCGC 74% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065753.2 ENSMUST00000151826.2 |
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| CDS TCA 90 bp | CGCCTCCGAGGACACACCAGCCATGCCTCCGACTCCTTCCGACCCTaGCCGCGCCGCTTCCGCTCGCTTCGGAAATCCTCCGGCCTCTTC | + |
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Preference number: 5 (lower is better) Translates to: RLRGHTSHASDSFRP*PRRFRSLRKSSGLF Trigger: GAAGAGGCCGGAGGATTTCCGAAGCGAGCGGAAGCGGCGCGGTCAGGGTCGGAAGGAGTCGGAGGCATGGCTGGTGTGTCCTCGGAGGCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065753.2 |
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| CDS GCA 90 bp | CCTGAGACAAAGCTCAGCCCAAAGTCGATGAGCACGATGTGCAGCTaGGCCAGGGGCCGCCTCAGGAGCATGTTGGAGGTGGTGAGGTCC | + |
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Preference number: 5 (lower is better) Translates to: PETKLSPKSMSTMCS*ARGRLRSMLEVVRS Trigger: GGACCTCACCACCTCCAACATGCTCCTGAGGCGGCCCCTGGCGCAGCTGCACATCGTGCTCATCGACTTTGGGCTGAGCTTTGTCTCAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS GCA 90 bp | GGCAGTCCTGAGACAAAGCTCAGCCCAAAGTCGATGAGCACGATGTaGAGCTGCGCCAGGGGCCGCCTCAGGAGCATGTTGGAGGTGGTG | + |
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Preference number: 5 (lower is better) Translates to: GSPETKLSPKSMSTM*SCARGRLRSMLEVV Trigger: CACCACCTCCAACATGCTCCTGAGGCGGCCCCTGGCGCAGCTGCACATCGTGCTCATCGACTTTGGGCTGAGCTTTGTCTCAGGACTGCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS-3UTR CAA 90 bp | GTCTGTAGGAAGCCTTGCTGGCCTGATCCCCAGTCCCCACACTCCCATGCAGAACGCCTCAGGAGCATGTaGGAGGTGGTGAGGTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: VCRKPCWPDPQSPHSHAERLRSM*EVVRSP Trigger: CGGGGACCTCACCACCTCCAACATGCTCCTGAGGCG...TTCTGCATGGGAGTGTGGGGACTGGGGATCAGGCCAGCAAGGCTTCCTACAGAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS TCA 90 bp | CTTTATCTTCCGGCAGTCCTGAGACAAAGCTCAGCCCAAAGTCGATaGGCACGATGTGCAGCTGCGCCAGGGGCCGCCTCAGGAGCATGT | + |
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Preference number: 5 (lower is better) Translates to: LYLPAVLRQSSAQSR*ARCAAAPGAASGAC Trigger: ACATGCTCCTGAGGCGGCCCCTGGCGCAGCTGCACATCGTGCTCATCGACTTTGGGCTGAGCTTTGTCTCAGGACTGCCGGAAGATAAAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS TCA 90 bp | TCTTCAGAAAGGCTTCAAACGCGGTCTCGGTGTGGGGGTGCGTGCTaGGGAAGGCCTTCTCCAGGACATAGAGGTCGACGCCTTTATCTT | + |
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Preference number: 5 (lower is better) Translates to: SSERLQTRSRCGGAC*GRPSPGHRGRRLYL Trigger: AAGATAAAGGCGTCGACCTCTATGTCCTGGAGAAGGCCTTCCTCAGCACGCACCCCCACACCGAGACCGCGTTTGAAGCCTTTCTGAAGA 56% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS-3UTR CAA 90 bp | GAAGAACAGTCAGTGATCTTAACTGCTGAGCCATCTCTCCAGCCCGTCATGGTGCCCGTGAATGAGGTCTaGGTCGTGCATTCCGGCCAG | + |
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Preference number: 5 (lower is better) Translates to: EEQSVILTAEPSLQPVMVPVNEV*VVHSGQ Trigger: CTGGCCGGAATGCACGACCAAGACCTCATTCACGGG...CACCATGACGGGCTGGAGAGATGGCTCAGCAGTTAAGATCACTGACTGTTCTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS TCA 90 bp | CTTCTCCAGGACATAGAGGTCGACGCCTTTATCTTCCGGCAGTCCTaGGACAAAGCTCAGCCCAAAGTCGATGAGCACGATGTGCAGCTG | + |
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Preference number: 5 (lower is better) Translates to: LLQDIEVDAFIFRQS*DKAQPKVDEHDVQL Trigger: CAGCTGCACATCGTGCTCATCGACTTTGGGCTGAGCTTTGTCTCAGGACTGCCGGAAGATAAAGGCGTCGACCTCTATGTCCTGGAGAAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS CCA 90 bp | TCAGGCGCACCTCATCTAACTTCTTCAGCACTGGACTGGACTTCTTaGACGAGGCCCCGTAACTCTTCAGAAAGGCTTCAAACGCGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SGAPHLTSSALDWTS*TRPRNSSERLQTRS Trigger: AGACCGCGTTTGAAGCCTTTCTGAAGAGTTACGGGGCCTCGTCCAAGAAGTCCAGTCCAGTGCTGAAGAAGTTAGATGAGGTGCGCCTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS CCA 90 bp | TTCGCCCTCTCAGGCGCACCTCATCTAACTTCTTCAGCACTGGACTaGACTTCTTGGACGAGGCCCCGTAACTCTTCAGAAAGGCTTCAA | + |
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Preference number: 5 (lower is better) Translates to: FALSGAPHLTSSALD*TSWTRPRNSSERLQ Trigger: TTGAAGCCTTTCTGAAGAGTTACGGGGCCTCGTCCAAGAAGTCCAGTCCAGTGCTGAAGAAGTTAGATGAGGTGCGCCTGAGAGGGCGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS-3UTR CAA 90 bp | TGTTCGAGGGATGTTGGATGCCCTGGAGTTGGGGTCACAGGTGGCTTTGAGTTAAGTCTCCATAGTGGATaGGATATAATCCCGAACAGT | + |
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Preference number: 5 (lower is better) Translates to: CSRDVGCPGVGVTGGFELSLHSG*DIIPNS Trigger: ACTGTTCGGGATTATATCCAATCCACTATGGAGACT...TAACTCAAAGCCACCTGTGACCCCAACTCCAGGGCATCCAACATCCCTCGAACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS CCA 72 bp | TTCGGGAAGCGGTGCTTCACCACGGCCGCGCGGCCCTaGAAGCGGCCACGGAAAACGCGCGCCTCGGCGCCC | + |
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Preference number: 6 (lower is better) Translates to: FGKRCFTTAARP*KRPRKTRASAP Trigger: GGGCGCCGAGGCGCGCGTTTTCCGTGGCCGCTTCCAGGGCCGCGCGGCCGTGGTGAAGCACCGCTTCCCGAA 75% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065753.2 ENSMUST00000151826.2 |
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| CDS GCA 72 bp | TGGAAGCGGCCACGGAAAACGCGCGCCTCGGCGCCCTaGTGCACCAGCTCTAGGCCGCTCAGGAAGAGGCGG | + |
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Preference number: 6 (lower is better) Translates to: WKRPRKTRASAP*CTSSRPLRKRR Trigger: CCGCCTCTTCCTGAGCGGCCTAGAGCTGGTGCAGCAGGGCGCCGAGGCGCGCGTTTTCCGTGGCCGCTTCCA 71% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000065753.2 ENSMUST00000151826.2 |
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| CDS TCA 72 bp | GGACACACCAGCCATGCCTCCGACTCCTTCCGACCCTaGCCGCGCCGCTTCCGCTCGCTTCGGAAATCCTCC | + |
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Preference number: 6 (lower is better) Translates to: GHTSHASDSFRP*PRRFRSLRKSS Trigger: GGAGGATTTCCGAAGCGAGCGGAAGCGGCGCGGTCAGGGTCGGAAGGAGTCGGAGGCATGGCTGGTGTGTCC 67% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000065753.2 |
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| CDS TCA 72 bp | CCGGCAGTCCTGAGACAAAGCTCAGCCCAAAGTCGATaGGCACGATGTGCAGCTGCGCCAGGGGCCGCCTCA | + |
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Preference number: 6 (lower is better) Translates to: PAVLRQSSAQSR*ARCAAAPGAAS Trigger: TGAGGCGGCCCCTGGCGCAGCTGCACATCGTGCTCATCGACTTTGGGCTGAGCTTTGTCTCAGGACTGCCGG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS CAA 90 bp | CCTCAGGAGCATGTTGGAGGTGGTGAGGTCCCCGTGAATGAGGTCTaGGTCGTGCATTCCGGCCAGAACCTGCCCCATCCTCCTGGCCAG | + |
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Preference number: 6 (lower is better) Translates to: PQEHVGGGEVPVNEV*VVHSGQNLPHPPGQ Trigger: CTGGCCAGGAGGATGGGGCAGGTTCTGGCCGGAATGCACGACCAAGACCTCATTCACGGGGACCTCACCACCTCCAACATGCTCCTGAGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS GCA 72 bp | AAGCTCAGCCCAAAGTCGATGAGCACGATGTGCAGCTaGGCCAGGGGCCGCCTCAGGAGCATGTTGGAGGTG | + |
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Preference number: 6 (lower is better) Translates to: KLSPKSMSTMCS*ARGRLRSMLEV Trigger: CACCTCCAACATGCTCCTGAGGCGGCCCCTGGCGCAGCTGCACATCGTGCTCATCGACTTTGGGCTGAGCTT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS GCA 72 bp | GAGACAAAGCTCAGCCCAAAGTCGATGAGCACGATGTaGAGCTGCGCCAGGGGCCGCCTCAGGAGCATGTTG | + |
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Preference number: 6 (lower is better) Translates to: ETKLSPKSMSTM*SCARGRLRSML Trigger: CAACATGCTCCTGAGGCGGCCCCTGGCGCAGCTGCACATCGTGCTCATCGACTTTGGGCTGAGCTTTGTCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS TCA 72 bp | GACATAGAGGTCGACGCCTTTATCTTCCGGCAGTCCTaGGACAAAGCTCAGCCCAAAGTCGATGAGCACGAT | + |
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Preference number: 6 (lower is better) Translates to: DIEVDAFIFRQS*DKAQPKVDEHD Trigger: ATCGTGCTCATCGACTTTGGGCTGAGCTTTGTCTCAGGACTGCCGGAAGATAAAGGCGTCGACCTCTATGTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS CCA 72 bp | CCTCATCTAACTTCTTCAGCACTGGACTGGACTTCTTaGACGAGGCCCCGTAACTCTTCAGAAAGGCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: PHLTSSALDWTS*TRPRNSSERLQ Trigger: TTGAAGCCTTTCTGAAGAGTTACGGGGCCTCGTCCAAGAAGTCCAGTCCAGTGCTGAAGAAGTTAGATGAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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| CDS CAA 90 bp | CAGGTCCAAGAGGCACTGGGGGTCCTTTTCAGTCTCCATAGTGGATaGGATATAATCCCGAACAGTCACCGAGTCTTCGATTTCTTCCAT | + |
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Preference number: 6 (lower is better) Translates to: QVQEALGVLFSLHSG*DIIPNSHRVFDFFH Trigger: ATGGAAGAAATCGAAGACTCGGTGACTGTTCGGGATTATATCCAATCCACTATGGAGACTGAAAAGGACCCCCAGTGCCTCTTGGACCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000151826.2 |
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