Pregenerated sensors for TRP53INP2 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000038375Ensembl transcript IDs: ENSMUST00000043237.14, ENSMUST00000134218.2, ENSMUST00000151466.8, ENSMUST00000174685.8
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CCAGGGCTTAGCTACTCTGACCAAGCACAATACCAGCTCCCAAGATaGCCTGCTCCCTGCTACTTCTCAACCCACCTGTCCCCATCTGCG | + |
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Preference number: 1 (lower is better) Translates to: PGLSYSDQAQYQLPR*PAPCYFSTHLSPSA Trigger: CGCAGATGGGGACAGGTGGGTTGAGAAGTAGCAGGGAGCAGGGCATCTTGGGAGCTGGTATTGTGCTTGGTCAGAGTAGCTAAGCCCTGG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR TCA 90 bp | GTCAGGATGATGGGGCCTTACCCAGCTTCTACTCCTGGGGTGGCATaGCAAGGTAAGGTGACAAGGTACAAGCCCTTCGGACTCCAGACT | + |
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Preference number: 1 (lower is better) Translates to: VRMMGPYPASTPGVA*QGKVTRYKPFGLQT Trigger: AGTCTGGAGTCCGAAGGGCTTGTACCTTGTCACCTTACCTTGTCATGCCACCCCAGGAGTAGAAGCTGGGTAAGGCCCCATCATCCTGAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR CCA 90 bp | GAGCTGAAGCGGAGAAGGTGCCAAGTCAGGGTCTTAGGAATCGGGTaGGCTAAGAGGGAAAAGGTGAAGGGGCGAGAGACAAGAATAGAG | + |
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Preference number: 1 (lower is better) Translates to: ELKRRRCQVRVLGIG*AKREKVKGRETRIE Trigger: CTCTATTCTTGTCTCTCGCCCCTTCACCTTTTCCCTCTTAGCCCACCCGATTCCTAAGACCCTGACTTGGCACCTTCTCCGCTTCAGCTC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR CCA 90 bp | CTAAGACGTTATAGGTCCCAGCAAGTTGATCAGAGGGTTCCAGGCTaGGGGGCAGGCACACTCCAAAACAGCACCAAACCACACTCACAC | + |
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Preference number: 1 (lower is better) Translates to: LRRYRSQQVDQRVPG*GAGTLQNSTKPHSH Trigger: GTGTGAGTGTGGTTTGGTGCTGTTTTGGAGTGTGCCTGCCCCCCAGCCTGGAACCCTCTGATCAACTTGCTGGGACCTATAACGTCTTAG 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR TCA 90 bp | CACACACGGTGCCCTGCTGGGGCTAGACTGGCAAAGGTTAGAAAGTaGCACCAGCTCAAGAGAACCACTCAGACTTATTGGAGAAAGCGC | + |
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Preference number: 1 (lower is better) Translates to: HTRCPAGARLAKVRK*HQLKRTTQTYWRKR Trigger: GCGCTTTCTCCAATAAGTCTGAGTGGTTCTCTTGAGCTGGTGTCACTTTCTAACCTTTGCCAGTCTAGCCCCAGCAGGGCACCGTGTGTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR TCA 90 bp | TTTACCCTCGTAGGAATGCAGTTTTCTCCAACCCTGGCTTGGCTCTaGGACCTGAAACCTGGGGTTGGAGGGAAGGGAAGACCTGTGTTA | + |
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Preference number: 1 (lower is better) Translates to: FTLVGMQFSPTLAWL*DLKPGVGGKGRPVL Trigger: TAACACAGGTCTTCCCTTCCCTCCAACCCCAGGTTTCAGGTCTCAGAGCCAAGCCAGGGTTGGAGAAAACTGCATTCCTACGAGGGTAAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR TCA 90 bp | AAGCTAATTCTAGCACCTTGGGCATATGAACAGAGATGGTCAGGATaGTGGGGCCTTACCCAGCTTCTACTCCTGGGGTGGCATGACAAG | + |
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Preference number: 1 (lower is better) Translates to: KLILAPWAYEQRWSG*WGLTQLLLLGWHDK Trigger: CTTGTCATGCCACCCCAGGAGTAGAAGCTGGGTAAGGCCCCATCATCCTGACCATCTCTGTTCATATGCCCAAGGTGCTAGAATTAGCTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR TCA 90 bp | CATACACAGGCATGCCACATGACCAGGTCGAGGTGGTTGTGTCCTTaGGTCTGTCGACACATCACAACATGGTCAGTCAAAGATTCTTCA | + |
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Preference number: 1 (lower is better) Translates to: HTQACHMTRSRWLCP*VCRHITTWSVKDSS Trigger: TGAAGAATCTTTGACTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACCTCGACCTGGTCATGTGGCATGCCTGTGTATG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR TCA 90 bp | CCTAACATTCAGAATCCTGTTACACACATACACAGGCATGCCACATaGCCAGGTCGAGGTGGTTGTGTCCTTGAGTCTGTCGACACATCA | + |
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Preference number: 1 (lower is better) Translates to: PNIQNPVTHIHRHAT*PGRGGCVLESVDTS Trigger: TGATGTGTCGACAGACTCAAGGACACAACCACCTCGACCTGGTCATGTGGCATGCCTGTGTATGTGTGTAACAGGATTCTGAATGTTAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR CCA 90 bp | TATAAGGCCAGAGGCAAGATAAAGGCAGAGCTGTCAGTCTGGGGATaGCTTTACCTCATAGTTGTCCTCCTTAGCATCATGCCTCCTCAT | + |
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Preference number: 1 (lower is better) Translates to: YKARGKIKAELSVWG*LYLIVVLLSIMPPH Trigger: ATGAGGAGGCATGATGCTAAGGAGGACAACTATGAGGTAAAGCCATCCCCAGACTGACAGCTCTGCCTTTATCTTGCCTCTGGCCTTATA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR TCA 90 bp | AGTATGACAGGGTCTGATGCTTCAGGAGTCAGACTAGCAGGAGACTaGGTAGTGTTGGTTCTTAGACATCTATACACAACAAAAATATTG | + |
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Preference number: 1 (lower is better) Translates to: SMTGSDASGVRLAGD*VVLVLRHLYTTKIL Trigger: CAATATTTTTGTTGTGTATAGATGTCTAAGAACCAACACTACTCAGTCTCCTGCTAGTCTGACTCCTGAAGCATCAGACCCTGTCATACT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTCGAGGTGGTTGTGTCCTTGAGTCTGTCGACACATCACAACATGGTCAGCCTCGAGCAGCACACTaGCTGCTGCAGAGGAGGCGG | + |
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Preference number: 2 (lower is better) Translates to: PGRGGCVLESVDTSQHGQPRAAH*LLQRRR Trigger: CCGCCTCCTCTGCAGCAGCCAGTGTGCTGCTCGAGG...CTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACCTCGACCTGG 59% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR TCA 90 bp | CAGGATGAGGACAATGGCCCAGGCCTGGCAGGTTGCACCTGCAGGATTGGGAGGCTAAGAGGGAAAAGGTaGAGGGGCGAGAGACAAGAA | + |
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Preference number: 2 (lower is better) Translates to: QDEDNGPGLAGCTCRIGRLRGKR*RGERQE Trigger: TTCTTGTCTCTCGCCCCTTCACCTTTTCCCTCTTAG...CCTCCCAATCCTGCAGGTGCAACCTGCCAGGCCTGGGCCATTGTCCTCATCCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR TCA 90 bp | ATCCCTGACTACAGGATGAGGACAATGGCCCAGGCCTGGCAGGTTGCACCTGCAAGAAAGGAGGGAGGATaGCCCAGGATGAGAGAGGTT | + |
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Preference number: 2 (lower is better) Translates to: IPDYRMRTMAQAWQVAPARKEGG*PRMREV Trigger: AACCTCTCTCATCCTGGGTCATCCTCCCTCCTTTCT...TGCAGGTGCAACCTGCCAGGCCTGGGCCATTGTCCTCATCCTGTAGTCAGGGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR TCA 90 bp | CCAGGTCGAGGTGGTTGTGTCCTTGAGTCTGTCGACACATCACAACATGGTCAGTGGGAATTGGGACAGTaGGGCTCCTGGCCTCCTCTA | + |
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Preference number: 2 (lower is better) Translates to: PGRGGCVLESVDTSQHGQWELGQ*GSWPPL Trigger: TAGAGGAGGCCAGGAGCCTCACTGTCCCAATTCCCA...CTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACCTCGACCTGG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR GCA 90 bp | GGCTCCTGGCCTCCTCTACCCAGGAGTGTTTATTATCCAGCCATATTGAACAAAGAGCAGCACACTGGCTaGTGCAGAGGAGGCGGATGG | + |
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Preference number: 2 (lower is better) Translates to: GSWPPLPRSVYYPAILNKEQHTG*CRGGGW Trigger: CCATCCGCCTCCTCTGCAGCAGCCAGTGTGCTGCTC...TTTGTTCAATATGGCTGGATAATAAACACTCCTGGGTAGAGGAGGCCAGGAGCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR CCA 90 bp | GGTAAGGTGACAAGGTACAAGCCCTTCGGACTCCAGACTCACAGGGACAGGGGTTTGCACCTGCAGGATTaGGAGGGAATTGCCAGGAAT | + |
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Preference number: 2 (lower is better) Translates to: GKVTRYKPFGLQTHRDRGLHLQD*EGIARN Trigger: ATTCCTGGCAATTCCCTCCCAATCCTGCAGGTGCAA...ACCCCTGTCCCTGTGAGTCTGGAGTCCGAAGGGCTTGTACCTTGTCACCTTACC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR CAA 90 bp | CAGCTAGAAAGAACCGGAAACAACTTGGGGCATCCCAAGAGGCTGTaGCTGGTGTCTGAGCCCCACCACAAGAAAGAAGAAGCTGGCAAC | + |
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Preference number: 2 (lower is better) Translates to: QLERTGNNLGHPKRL*LVSEPHHKKEEAGN Trigger: GTTGCCAGCTTCTTCTTTCTTGTGGTGGGGCTCAGACACCAGCAACAGCCTCTTGGGATGCCCCAAGTTGTTTCCGGTTCTTTCTAGCTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR CAA 90 bp | CCAAATGCCCTATCAAGCTTCCTACAGCAGCAAGATCATGGACATTaGCCCAGGACTAAGCCTAGGCCCCAACTGGCAGTGAGGAGTAGA | + |
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Preference number: 2 (lower is better) Translates to: PNALSSFLQQQDHGH*PRTKPRPQLAVRSR Trigger: TCTACTCCTCACTGCCAGTTGGGGCCTAGGCTTAGTCCTGGGCAAATGTCCATGATCTTGCTGCTGTAGGAAGCTTGATAGGGCATTTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR TCA 90 bp | CCAGGTCGAGGTGGTTGTGTCCTTGAGTCTGTCGACACATCACAACATGGTCAGGAGGATGACCCAGGATaGGAGAGGTTAATAGGTGAG | + |
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Preference number: 2 (lower is better) Translates to: PGRGGCVLESVDTSQHGQEDDPG*ERLIGE Trigger: CTCACCTATTAACCTCTCTCATCCTGGGTCATCCTC...CTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACCTCGACCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR TCA 90 bp | GTCTGGGGATGGCTTTACCTCATAGTTGTCCTCCTTAGCATCATGCCTCCTCATACTCCTGGGGTGGCATaGCAAGGTAAGGTGACAAGG | + |
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Preference number: 2 (lower is better) Translates to: VWGWLYLIVVLLSIMPPHTPGVA*QGKVTR Trigger: CCTTGTCACCTTACCTTGTCATGCCACCCCAGGAGT...ATGAGGAGGCATGATGCTAAGGAGGACAACTATGAGGTAAAGCCATCCCCAGAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR CCA 90 bp | CCAGGTCGAGGTGGTTGTGTCCTTGAGTCTGTCGACACATCACAACATGGTCAGTTCCTTTTCCCTGCCTaGAAATCCTCTGGCCTGCAT | + |
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Preference number: 2 (lower is better) Translates to: PGRGGCVLESVDTSQHGQFLFPA*KSSGLH Trigger: ATGCAGGCCAGAGGATTTCCAGGCAGGGAAAAGGAA...CTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACCTCGACCTGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR TCA 90 bp | TTCACTTCAGCCAGTCTCAACACAAAACACCCAACAGAGATGCACTCAACTTGTTGGGTGTGGGGAGTGTaGGGGTGGAGAATCAGACAC | + |
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Preference number: 2 (lower is better) Translates to: FTSASLNTKHPTEMHSTCWVWGV*GWRIRH Trigger: GTGTCTGATTCTCCACCCTCACACTCCCCACACCCA...ACAAGTTGAGTGCATCTCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR TCA 90 bp | GTCTGGGGATGGCTTTACCTCATAGTTGTCCTCCTTAGCATCATGCCTCCTCATGGTAGGGGTTACTCCTaGAGGACAAATTTCAGGGAG | + |
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Preference number: 2 (lower is better) Translates to: VWGWLYLIVVLLSIMPPHGRGYS*RTNFRE Trigger: CTCCCTGAAATTTGTCCTTCAGGAGTAACCCCTACC...ATGAGGAGGCATGATGCTAAGGAGGACAACTATGAGGTAAAGCCATCCCCAGAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR TCA 90 bp | TTCACTTCAGCCAGTCTCAACACAAAACACCCAACAGAGATGCACTCAACTTGTACCCTGGCTTGGCTCTaGGACCTGAAACCTGGGGTT | + |
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Preference number: 2 (lower is better) Translates to: FTSASLNTKHPTEMHSTCTLAWL*DLKPGV Trigger: AACCCCAGGTTTCAGGTCTCAGAGCCAAGCCAGGGT...ACAAGTTGAGTGCATCTCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAGTGAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR TCA 90 bp | CCAGGTCGAGGTGGTTGTGTCCTTGAGTCTGTCGACACATCACAACATGGTCAGACAGTCAATACAGTATaGCAGGGTCTGATGCTTCAG | + |
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Preference number: 2 (lower is better) Translates to: PGRGGCVLESVDTSQHGQTVNTV*QGLMLQ Trigger: CTGAAGCATCAGACCCTGTCATACTGTATTGACTGT...CTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACCTCGACCTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR CAA 90 bp | CACCAGCTCAAGAGAACCACTCAGACTTATTGGAGAAAGCGCAGGTaGCCCTTTGATGTAATTGGGACTCACTCTAGAAACAGGTCCCTC | + |
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Preference number: 2 (lower is better) Translates to: HQLKRTTQTYWRKRR*PFDVIGTHSRNRSL Trigger: GAGGGACCTGTTTCTAGAGTGAGTCCCAATTACATCAAAGGGCAACCTGCGCTTTCTCCAATAAGTCTGAGTGGTTCTCTTGAGCTGGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR CAA 90 bp | ACATACACAGGCATGCCACATGACCAGGTCGAGGTGGTTGTGTCCTaGAGTCTGTCGACACATCACAACATGGTCAGTCAAAGATTCTTC | + |
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Preference number: 2 (lower is better) Translates to: TYTGMPHDQVEVVVS*SLSTHHNMVSQRFF Trigger: GAAGAATCTTTGACTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACCTCGACCTGGTCATGTGGCATGCCTGTGTATGT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR TCA 90 bp | CCAGGTCGAGGTGGTTGTGTCCTTGAGTCTGTCGACACATCACAACATGGTCAGTTGCATAGGACTTTGTaGATTCTGGTTCCCTTGTGT | + |
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Preference number: 2 (lower is better) Translates to: PGRGGCVLESVDTSQHGQLHRTL*ILVPLC Trigger: ACACAAGGGAACCAGAATTCACAAAGTCCTATGCAA...CTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACCTCGACCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR CAA 90 bp | ACATTAAGAAGACTCTTGAAGGCCCTGAATCTCTGTAAGAAAAATTaGGGAATTGGGACAGTGAGGCTCCTGGCCTCCTCTACCCAGGAG | + |
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Preference number: 2 (lower is better) Translates to: TLRRLLKALNLCKKN*GIGTVRLLASSTQE Trigger: CTCCTGGGTAGAGGAGGCCAGGAGCCTCACTGTCCCAATTCCCAAATTTTTCTTACAGAGATTCAGGGCCTTCAAGAGTCTTCTTAATGT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR TCA 90 bp | AGAAGACTCTTGAAGGCCCTGAATCTCTGTAAGAAAAATTTGGGAATTGGGACATCCCTGACTACAGGATaGGGACAATGGCCCAGGCCT | + |
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Preference number: 2 (lower is better) Translates to: RRLLKALNLCKKNLGIGTSLTTG*GQWPRP Trigger: AGGCCTGGGCCATTGTCCTCATCCTGTAGTCAGGGA...TGTCCCAATTCCCAAATTTTTCTTACAGAGATTCAGGGCCTTCAAGAGTCTTCT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR TCA 90 bp | TTCACTTCAGCCAGTCTCAACACAAAACACCCAACAGAGATGCACTCAACTTGTCCCATGCCTGATCCCTaGCTACAGGATGAGGACAAT | + |
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Preference number: 2 (lower is better) Translates to: FTSASLNTKHPTEMHSTCPMPDP*LQDEDN Trigger: ATTGTCCTCATCCTGTAGTCAGGGATCAGGCATGGG...ACAAGTTGAGTGCATCTCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAGTGAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR TCA 90 bp | GGTGGTTGTGTCCTTGAGTCTGTCGACACATCACAACATGGTCAGTCAAAGATTCAGTATGACAGGGTCTaGTGCTTCAGGAGTCAGACT | + |
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Preference number: 2 (lower is better) Translates to: GGCVLESVDTSQHGQSKIQYDRV*CFRSQT Trigger: AGTCTGACTCCTGAAGCATCAGACCCTGTCATACTG...AATCTTTGACTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR CCA 90 bp | GGTGGTTGTGTCCTTGAGTCTGTCGACACATCACAACATGGTCAGTCAAAGATTCTGTCAGTCTGGGGATaGCTTTACCTCATAGTTGTC | + |
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Preference number: 2 (lower is better) Translates to: GGCVLESVDTSQHGQSKILSVWG*LYLIVV Trigger: GACAACTATGAGGTAAAGCCATCCCCAGACTGACAG...AATCTTTGACTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR CCA 90 bp | CAAAGTATGAAATATAAGGCCAGAGGCAAGATAAAGGCAGAGCTGTCAGTCTGGTCCTCATTCTTGCCTTaGGGTGTGTTTCCTTTTCCC | + |
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Preference number: 2 (lower is better) Translates to: QSMKYKARGKIKAELSVWSSFLP*GVFPFP Trigger: GGGAAAAGGAAACACACCCCAAGGCAAGAATGAGGA...CCAGACTGACAGCTCTGCCTTTATCTTGCCTCTGGCCTTATATTTCATACTTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR CCA 90 bp | TTCACTTCAGCCAGTCTCAACACAAAACACCCAACAGAGATGCACTCAACTTGTGAAAAATTTGGGAATTaGGACAGTGAGGCTCCTGGC | + |
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Preference number: 2 (lower is better) Translates to: FTSASLNTKHPTEMHSTCEKFGN*DSEAPG Trigger: GCCAGGAGCCTCACTGTCCCAATTCCCAAATTTTTC...ACAAGTTGAGTGCATCTCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAGTGAA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR CCA 90 bp | GCATTACAACCTAACATTCAGAATCCTGTTACACACATACACAGGCATGCCACACTGCTGGGGCTAGACTaGCAAAGGTTAGAAAGTGAC | + |
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Preference number: 2 (lower is better) Translates to: ALQPNIQNPVTHIHRHATLLGLD*QRLESD Trigger: GTCACTTTCTAACCTTTGCCAGTCTAGCCCCAGCAG...TGTGGCATGCCTGTGTATGTGTGTAACAGGATTCTGAATGTTAGGTTGTAATGC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR GCA 90 bp | TTCACTTCAGCCAGTCTCAACACAAAACACCCAACAGAGATGCACTCAACTTGTAAGAAAAATAAGCCTTaGAACCAGATGAGAAATTGG | + |
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Preference number: 2 (lower is better) Translates to: FTSASLNTKHPTEMHSTCKKNKP*NQMRNW Trigger: CCAATTTCTCATCTGGTTGCAAGGCTTATTTTTCTT...ACAAGTTGAGTGCATCTCTGTTGGGTGTTTTGTGTTGAGACTGGCTGAAGTGAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR GCA 72 bp | CTACAGGATGAGGACAATGGCCCAGGCCTGGCAGGTTaGACCTGCAGGATTGGGAGGGAATTGCCAGGAATG | + |
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Preference number: 3 (lower is better) Translates to: LQDEDNGPGLAG*TCRIGRELPGM Trigger: CATTCCTGGCAATTCCCTCCCAATCCTGCAGGTGCAACCTGCCAGGCCTGGGCCATTGTCCTCATCCTGTAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR CCA 72 bp | ATCCCTGACTACAGGATGAGGACAATGGCCCAGGCCTaGCAGGTTGCACCTGCAGGATTGGGAGGGAATTGC | + |
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Preference number: 3 (lower is better) Translates to: IPDYRMRTMAQA*QVAPAGLGGNC Trigger: GCAATTCCCTCCCAATCCTGCAGGTGCAACCTGCCAGGCCTGGGCCATTGTCCTCATCCTGTAGTCAGGGAT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR TCA 72 bp | CAACTTGGGGCATCCCAAGAGGCTGTTGCTGGTGTCTaGGCCCCACCACAAGAAAGAAGAAGCTGGCAACCC | + |
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Preference number: 3 (lower is better) Translates to: QLGASQEAVAGV*APPQERRSWQP Trigger: GGGTTGCCAGCTTCTTCTTTCTTGTGGTGGGGCTCAGACACCAGCAACAGCCTCTTGGGATGCCCCAAGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR CCA 72 bp | CGGAGAAGGTGCCAAGTCAGGGTCTTAGGAATCGGGTaGGCTAAGAGGGAAAAGGTGAAGGGGCGAGAGACA | + |
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Preference number: 3 (lower is better) Translates to: RRRCQVRVLGIG*AKREKVKGRET Trigger: TGTCTCTCGCCCCTTCACCTTTTCCCTCTTAGCCCACCCGATTCCTAAGACCCTGACTTGGCACCTTCTCCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR CCA 72 bp | CAAGCCCTTCGGACTCCAGACTCACAGGGACAGGGGTaGGTAGGGGTTACTCCTGAAGGACAAATTTCAGGG | + |
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Preference number: 3 (lower is better) Translates to: QALRTPDSQGQG*VGVTPEGQISG Trigger: CCCTGAAATTTGTCCTTCAGGAGTAACCCCTACCCACCCCTGTCCCTGTGAGTCTGGAGTCCGAAGGGCTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR TCA 72 bp | CTAGCACCTTGGGCATATGAACAGAGATGGTCAGGATaGTGGGGCCTTACCCAGCTTCTACTCCTGGGGTGG | + |
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Preference number: 3 (lower is better) Translates to: LAPWAYEQRWSG*WGLTQLLLLGW Trigger: CCACCCCAGGAGTAGAAGCTGGGTAAGGCCCCATCATCCTGACCATCTCTGTTCATATGCCCAAGGTGCTAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR TCA 72 bp | ATTTGCCCAGGACTAAGCCTAGGCCCCAACTGGCAGTaGGGAGTAGACAAGAAGGGCAAGAGGGAGCTTCAG | + |
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Preference number: 3 (lower is better) Translates to: ICPGLSLGPNWQ*GVDKKGKRELQ Trigger: CTGAAGCTCCCTCTTGCCCTTCTTGTCTACTCCTCACTGCCAGTTGGGGCCTAGGCTTAGTCCTGGGCAAAT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR GCA 72 bp | AGCTACTCTGACCAAGCACAATACCAGCTCCCAAGATaGCCTGCTCCCTGCTACTTCTCAACCCACCTGTCC | + |
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Preference number: 3 (lower is better) Translates to: SYSDQAQYQLPR*PAPCYFSTHLS Trigger: GGACAGGTGGGTTGAGAAGTAGCAGGGAGCAGGGCATCTTGGGAGCTGGTATTGTGCTTGGTCAGAGTAGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
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| 3UTR-3UTR CAA 90 bp | CCAGGTCGAGGTGGTTGTGTCCTTGAGTCTGTCGACACATCACAACATGGTCAGAGAACCGGAAACAACTaGGGGCATCCCAAGAGGCTG | + |
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Preference number: 3 (lower is better) Translates to: PGRGGCVLESVDTSQHGQRTGNN*GHPKRL Trigger: CAGCCTCTTGGGATGCCCCAAGTTGTTTCCGGTTCT...CTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACCTCGACCTGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR TCA 72 bp | CAGCTTCTACTCCTGGGGTGGCATGACAAGGTAAGGTaGCAAGGTACAAGCCCTTCGGACTCCAGACTCACA | + |
|
Preference number: 3 (lower is better) Translates to: QLLLLGWHDKVR*QGTSPSDSRLT Trigger: TGTGAGTCTGGAGTCCGAAGGGCTTGTACCTTGTCACCTTACCTTGTCATGCCACCCCAGGAGTAGAAGCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR TCA 72 bp | GTAGGAATGCAGTTTTCTCCAACCCTGGCTTGGCTCTaGGACCTGAAACCTGGGGTTGGAGGGAAGGGAAGA | + |
|
Preference number: 3 (lower is better) Translates to: VGMQFSPTLAWL*DLKPGVGGKGR Trigger: TCTTCCCTTCCCTCCAACCCCAGGTTTCAGGTCTCAGAGCCAAGCCAGGGTTGGAGAAAACTGCATTCCTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR TCA 72 bp | TGTCCCCATCCTGGGGACATCCTCTCCCATCCCACATaGAGCCTAGTAAGAAAGGATCAAAGAGGGCAGCTA | + |
|
Preference number: 3 (lower is better) Translates to: CPHPGDILSHPT*SLVRKDQRGQL Trigger: TAGCTGCCCTCTTTGATCCTTTCTTACTAGGCTTCATGTGGGATGGGAGAGGATGTCCCCAGGATGGGGACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGTCGAGGTGGTTGTGTCCTTGAGTCTGTCGACACATCACAACATGGTCAGCTGGTAGGGTCCTTGTaGCACCTAAGACGTTATAGG | + |
|
Preference number: 3 (lower is better) Translates to: PGRGGCVLESVDTSQHGQLVGSL*HLRRYR Trigger: CCTATAACGTCTTAGGTGCAACAAGGACCCTACCAG...CTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACCTCGACCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGTCGAGGTGGTTGTGTCCTTGAGTCTGTCGACACATCACAACATGGTCAGGCTCTGGTAGGGTCCTaGTTGCACCTAAGACGTTAT | + |
|
Preference number: 3 (lower is better) Translates to: PGRGGCVLESVDTSQHGQALVGS*LHLRRY Trigger: ATAACGTCTTAGGTGCAACAAGGACCCTACCAGAGC...CTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACCTCGACCTGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR TCA 72 bp | TGCCCTGCTGGGGCTAGACTGGCAAAGGTTAGAAAGTaGCACCAGCTCAAGAGAACCACTCAGACTTATTGG | + |
|
Preference number: 3 (lower is better) Translates to: CPAGARLAKVRK*HQLKRTTQTYW Trigger: CCAATAAGTCTGAGTGGTTCTCTTGAGCTGGTGTCACTTTCTAACCTTTGCCAGTCTAGCCCCAGCAGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR TCA 72 bp | GCATGCCACATGACCAGGTCGAGGTGGTTGTGTCCTTaGGTCTGTCGACACATCACAACATGGTCAGTCAAA | + |
|
Preference number: 3 (lower is better) Translates to: ACHMTRSRWLCP*VCRHITTWSVK Trigger: TTTGACTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACCTCGACCTGGTCATGTGGCATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR-3UTR CAA 90 bp | GCATTACAACCTAACATTCAGAATCCTGTTACACACATACACAGGCATGCCACACATCCCAAGAGGCTGTaGCTGGTGTCTGAGCCCCAC | + |
|
Preference number: 3 (lower is better) Translates to: ALQPNIQNPVTHIHRHATHPKRL*LVSEPH Trigger: GTGGGGCTCAGACACCAGCAACAGCCTCTTGGGATG...TGTGGCATGCCTGTGTATGTGTGTAACAGGATTCTGAATGTTAGGTTGTAATGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR CCA 72 bp | AAGAGTGGGAGCGATCCCAAACAGAAGAGTAAGTCTTaGAAAGTAGGAGCTGAAGCGGAGAAGGTGCCAAGT | + |
|
Preference number: 3 (lower is better) Translates to: KSGSDPKQKSKS*KVGAEAEKVPS Trigger: ACTTGGCACCTTCTCCGCTTCAGCTCCTACTTTCCAAGACTTACTCTTCTGTTTGGGATCGCTCCCACTCTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR-3UTR CAA 90 bp | GGCTCCTGGCCTCCTCTACCCAGGAGTGTTTATTATCCAGCCATATTGAACAAACTCCTCATTCTTGCCTaGGGGTGTGTTTCCTTTTCC | + |
|
Preference number: 3 (lower is better) Translates to: GSWPPLPRSVYYPAILNKLLILA*GCVSFS Trigger: GGAAAAGGAAACACACCCCAAGGCAAGAATGAGGAG...TTTGTTCAATATGGCTGGATAATAAACACTCCTGGGTAGAGGAGGCCAGGAGCC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR-3UTR CAA 90 bp | CCAGGTCGAGGTGGTTGTGTCCTTGAGTCTGTCGACACATCACAACATGGTCAGACATTAAGAAGACTCTaGAAGGCCCTGAATCTCTGT | + |
|
Preference number: 3 (lower is better) Translates to: PGRGGCVLESVDTSQHGQTLRRL*KALNLC Trigger: ACAGAGATTCAGGGCCTTCAAGAGTCTTCTTAATGT...CTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACCTCGACCTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR GCA 72 bp | ATAGTTGTCCTCCTTAGCATCATGCCTCCTCATTCTTaGCTTGGGGTGTGTTTCCTTTTCCCTGCCTGGAAA | + |
|
Preference number: 3 (lower is better) Translates to: IVVLLSIMPPHS*LGVCFLFPAWK Trigger: TTTCCAGGCAGGGAAAAGGAAACACACCCCAAGGCAAGAATGAGGAGGCATGATGCTAAGGAGGACAACTAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR CCA 72 bp | AGAGGCAAGATAAAGGCAGAGCTGTCAGTCTGGGGATaGCTTTACCTCATAGTTGTCCTCCTTAGCATCATG | + |
|
Preference number: 3 (lower is better) Translates to: RGKIKAELSVWG*LYLIVVLLSIM Trigger: CATGATGCTAAGGAGGACAACTATGAGGTAAAGCCATCCCCAGACTGACAGCTCTGCCTTTATCTTGCCTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR TCA 72 bp | AAGGCACATACACAGTCAATACAGTATGACAGGGTCTaGTGCTTCAGGAGTCAGACTAGCAGGAGACTGAGT | + |
|
Preference number: 3 (lower is better) Translates to: KAHTQSIQYDRV*CFRSQTSRRLS Trigger: ACTCAGTCTCCTGCTAGTCTGACTCCTGAAGCATCAGACCCTGTCATACTGTATTGACTGTGTATGTGCCTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR GCA 72 bp | ACCACAAGAAAGAAGAAGCTGGCAACCCCATCCCTGTaGCCTACCCAAGAATTCCTTACTCCAGATATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: TTRKKKLATPSL*PTQEFLTPDIE Trigger: TTCAATATCTGGAGTAAGGAATTCTTGGGTAGGGCACAGGGATGGGGTTGCCAGCTTCTTCTTTCTTGTGGT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR-3UTR CAA 90 bp | ATAGGGCACTCAGAAAGAGCCCTGTGGGAGAACATTAAGAAGACTCTTGAAGGCCTCTGTAAGAAAAATTaGGGAATTGGGACAGTGAGG | + |
|
Preference number: 3 (lower is better) Translates to: IGHSERALWENIKKTLEGLCKKN*GIGTVR Trigger: CCTCACTGTCCCAATTCCCAAATTTTTCTTACAGAG...GCCTTCAAGAGTCTTCTTAATGTTCTCCCACAGGGCTCTTTCTGAGTGCCCTAT 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR-3UTR CAA 90 bp | GGTGGTTGTGTCCTTGAGTCTGTCGACACATCACAACATGGTCAGTCAAAGATTACTTGTTGGTTCCATTaGGAACTAGGTGGTAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: GGCVLESVDTSQHGQSKITCWFH*ELGGRE Trigger: TTCCCTACCACCTAGTTCCAAATGGAACCAACAAGT...AATCTTTGACTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR TCA 72 bp | ATGAGAAATTGGAGGGGTCTAGAACTACCGGAGCTTTaGGAAATTAGGTCAGGAGCGAGGCCTTCTGAAATT | + |
|
Preference number: 3 (lower is better) Translates to: MRNWRGLELPEL*EIRSGARPSEI Trigger: AATTTCAGAAGGCCTCGCTCCTGACCTAATTTCTCAAAGCTCCGGTAGTTCTAGACCCCTCCAATTTCTCAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR TCA 72 bp | GGGTCTGATGCTTCAGGAGTCAGACTAGCAGGAGACTaGGTAGTGTTGGTTCTTAGACATCTATACACAACA | + |
|
Preference number: 3 (lower is better) Translates to: GSDASGVRLAGD*VVLVLRHLYTT Trigger: TGTTGTGTATAGATGTCTAAGAACCAACACTACTCAGTCTCCTGCTAGTCTGACTCCTGAAGCATCAGACCC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR CCA 72 bp | GAGCTTCAGCTCTTAAAAATGCTGAAGATCCTAAGCTaGCTGGGAAGTGACCTTAGGACAGTTGGAAGAGTA | + |
|
Preference number: 3 (lower is better) Translates to: ELQLLKMLKILS*LGSDLRTVGRV Trigger: TACTCTTCCAACTGTCCTAAGGTCACTTCCCAGCCAGCTTAGGATCTTCAGCATTTTTAAGAGCTGAAGCTC 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS-3UTR CCA 90 bp | ACCTGTCCCCATCTGCGGCCCCCACTAGGCTGCCTGTTTCCCTCCATTCCCTTCTGCAGCCTCCGCACCTaGCCAGCCTTCTCCAGCAGC | + |
|
Preference number: 4 (lower is better) Translates to: TCPHLRPPLGCLFPSIPFCSLRT*PAFSSS Trigger: GCTGCTGGAGAAGGCTGGCCAGGTGCGGAGGCTGCA...GAAGGGAATGGAGGGAAACAGGCAGCCTAGTGGGGGCCGCAGATGGGGACAGGT 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS-3UTR TCA 90 bp | ACCTGTCCCCATCTGCGGCCCCCACTAGGCTGCCTGTTTCCCTCCATTCCCTTCAAGGCAGCTTCAGGGTaGGGGGAAGGTGGCCCAGAC | + |
|
Preference number: 4 (lower is better) Translates to: TCPHLRPPLGCLFPSIPFKAASG*GEGGPD Trigger: GTCTGGGCCACCTTCCCCTCACCCTGAAGCTGCCTT...GAAGGGAATGGAGGGAAACAGGCAGCCTAGTGGGGGCCGCAGATGGGGACAGGT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 14 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS-3UTR GCA 90 bp | GGTAAGGTGACAAGGTACAAGCCCTTCGGACTCCAGACTCACAGGGACAGGGGTGGAGCAGCTGCGTGGTaGAAGGCCCTGGGTTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GKVTRYKPFGLQTHRDRGGAAAW*KALGSR Trigger: CCGGGAACCCAGGGCCTTGCACCACGCAGCTGCTCC...ACCCCTGTCCCTGTGAGTCTGGAGTCCGAAGGGCTTGTACCTTGTCACCTTACC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS-3UTR GCA 90 bp | ATCCCTGACTACAGGATGAGGACAATGGCCCAGGCCTGGCAGGTTGCACCTGCAGGGCATAGGAGCAGCTaGGTGGTGCAAGGCCCTGGG | + |
|
Preference number: 4 (lower is better) Translates to: IPDYRMRTMAQAWQVAPAGHRSS*VVQGPG Trigger: CCCAGGGCCTTGCACCACGCAGCTGCTCCTATGCCC...TGCAGGTGCAACCTGCCAGGCCTGGGCCATTGTCCTCATCCTGTAGTCAGGGAT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS-3UTR CCA 90 bp | CAGGATGAGGACAATGGCCCAGGCCTGGCAGGTTGCACCTGCAGGATTGGGAGGATAGGAGCAGCTGCGTaGTGCAAGGCCCTGGGTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QDEDNGPGLAGCTCRIGRIGAAA*CKALGS Trigger: GGAACCCAGGGCCTTGCACCACGCAGCTGCTCCTAT...CCTCCCAATCCTGCAGGTGCAACCTGCCAGGCCTGGGCCATTGTCCTCATCCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS-3UTR GCA 90 bp | ATCCCTGACTACAGGATGAGGACAATGGCCCAGGCCTGGCAGGTTGCACCTGCAAAGGCCGGGCCCCTCTaGAGTAAAACAGGCGGGAGG | + |
|
Preference number: 4 (lower is better) Translates to: IPDYRMRTMAQAWQVAPAKAGPL*SKTGGR Trigger: CCTCCCGCCTGTTTTACTGCAGAGGGGCCCGGCCTT...TGCAGGTGCAACCTGCCAGGCCTGGGCCATTGTCCTCATCCTGTAGTCAGGGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS-3UTR CCA 90 bp | GTCTGGGGATGGCTTTACCTCATAGTTGTCCTCCTTAGCATCATGCCTCCTCATCAAGGAGGGCGCGGGTaGAGGGCGGCCTGCAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: VWGWLYLIVVLLSIMPPHQGGRG*RAACRS Trigger: GCTCCTGCAGGCCGCCCTCCACCCGCGCCCTCCTTG...ATGAGGAGGCATGATGCTAAGGAGGACAACTATGAGGTAAAGCCATCCCCAGAC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS-3UTR GCA 90 bp | ATAGGGCACTCAGAAAGAGCCCTGTGGGAGAACATTAAGAAGACTCTTGAAGGCGGTCCTCCAGCGGATTaGTCTGGAGGCGGGCAGGCC | + |
|
Preference number: 4 (lower is better) Translates to: IGHSERALWENIKKTLEGGPPAD*SGGGQA Trigger: GGCCTGCCCGCCTCCAGAGCAATCCGCTGGAGGACC...GCCTTCAAGAGTCTTCTTAATGTTCTCCCACAGGGCTCTTTCTGAGTGCCCTAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS-3UTR GCA 90 bp | CAGGATGAGGACAATGGCCCAGGCCTGGCAGGTTGCACCTGCAGGATTGGGAGGGCGCGATTCTGCCGTTaGAACACTTTAGCACTCAAT | + |
|
Preference number: 4 (lower is better) Translates to: QDEDNGPGLAGCTCRIGRARFCR*NTLALN Trigger: ATTGAGTGCTAAAGTGTTGCAACGGCAGAATCGCGC...CCTCCCAATCCTGCAGGTGCAACCTGCCAGGCCTGGGCCATTGTCCTCATCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS-3UTR GCA 90 bp | CAAAGTATGAAATATAAGGCCAGAGGCAAGATAAAGGCAGAGCTGTCAGTCTGGCGCTGTCGGGCTCTCTaGAGCCTCCGCACCTGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSMKYKARGKIKAELSVWRCRAL*SLRTWP Trigger: TGGCCAGGTGCGGAGGCTGCAGAGAGCCCGACAGCG...CCAGACTGACAGCTCTGCCTTTATCTTGCCTCTGGCCTTATATTTCATACTTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR CAA 72 bp | TACCCTCGTAGGAATGCAGTTTTCTCCAACCCTGGCTaGGCTCTGAGACCTGAAACCTGGGGTTGGAGGGAA | + |
|
Preference number: 4 (lower is better) Translates to: YPRRNAVFSNPG*ALRPETWGWRE Trigger: TTCCCTCCAACCCCAGGTTTCAGGTCTCAGAGCCAAGCCAGGGTTGGAGAAAACTGCATTCCTACGAGGGTA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS-3UTR TCA 90 bp | GTGAGGCTCCTGGCCTCCTCTACCCAGGAGTGTTTATTATCCAGCCATATTGAATGCTGGGATGCTCAATaGGGAGGTCCTCCAGCGGAT | + |
|
Preference number: 4 (lower is better) Translates to: VRLLASSTQECLLSSHIECWDAQ*GGPPAD Trigger: ATCCGCTGGAGGACCTCCTCATTGAGCATCCCAGCA...TTCAATATGGCTGGATAATAAACACTCCTGGGTAGAGGAGGCCAGGAGCCTCAC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR CAA 72 bp | AGAACCGGAAACAACTTGGGGCATCCCAAGAGGCTGTaGCTGGTGTCTGAGCCCCACCACAAGAAAGAAGAA | + |
|
Preference number: 4 (lower is better) Translates to: RTGNNLGHPKRL*LVSEPHHKKEE Trigger: TTCTTCTTTCTTGTGGTGGGGCTCAGACACCAGCAACAGCCTCTTGGGATGCCCCAAGTTGTTTCCGGTTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR CAA 72 bp | GGCATGCCACATGACCAGGTCGAGGTGGTTGTGTCCTaGAGTCTGTCGACACATCACAACATGGTCAGTCAA | + |
|
Preference number: 4 (lower is better) Translates to: GMPHDQVEVVVS*SLSTHHNMVSQ Trigger: TTGACTGACCATGTTGTGATGTGTCGACAGACTCAAGGACACAACCACCTCGACCTGGTCATGTGGCATGCC 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS-3UTR TCA 90 bp | GTGAGGCTCCTGGCCTCCTCTACCCAGGAGTGTTTATTATCCAGCCATATTGAACTATGGTGCTGCCGGTaGCATAAACGGACATGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VRLLASSTQECLLSSHIELWCCR*HKRTCW Trigger: CCAGCATGTCCGTTTATGTCACCGGCAGCACCATAG...TTCAATATGGCTGGATAATAAACACTCCTGGGTAGAGGAGGCCAGGAGCCTCAC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS-3UTR CCA 90 bp | GGCTCCTGGCCTCCTCTACCCAGGAGTGTTTATTATCCAGCCATATTGAACAAAAGGGTGAGGGGAAGGTaGCCCAGACTCCAGCACTAT | + |
|
Preference number: 4 (lower is better) Translates to: GSWPPLPRSVYYPAILNKRVRGR*PRLQHY Trigger: ATAGTGCTGGAGTCTGGGCCACCTTCCCCTCACCCT...TTTGTTCAATATGGCTGGATAATAAACACTCCTGGGTAGAGGAGGCCAGGAGCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS-3UTR CCA 90 bp | AGAAGACTCTTGAAGGCCCTGAATCTCTGTAAGAAAAATTTGGGAATTGGGACAAGCTGCCCTGGTGCTTaGGCCGGCGCGAACGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RRLLKALNLCKKNLGIGTSCPGA*AGANGS Trigger: AGAGCCGTTCGCGCCGGCCCAAGCACCAGGGCAGCT...TGTCCCAATTCCCAAATTTTTCTTACAGAGATTCAGGGCCTTCAAGAGTCTTCT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR CAA 72 bp | AGACTCTTGAAGGCCCTGAATCTCTGTAAGAAAAATTaGGGAATTGGGACAGTGAGGCTCCTGGCCTCCTCT | + |
|
Preference number: 4 (lower is better) Translates to: RLLKALNLCKKN*GIGTVRLLASS Trigger: AGAGGAGGCCAGGAGCCTCACTGTCCCAATTCCCAAATTTTTCTTACAGAGATTCAGGGCCTTCAAGAGTCT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| 3UTR CAA 72 bp | AAGAGAACCACTCAGACTTATTGGAGAAAGCGCAGGTaGCCCTTTGATGTAATTGGGACTCACTCTAGAAAC | + |
|
Preference number: 4 (lower is better) Translates to: KRTTQTYWRKRR*PFDVIGTHSRN Trigger: GTTTCTAGAGTGAGTCCCAATTACATCAAAGGGCAACCTGCGCTTTCTCCAATAAGTCTGAGTGGTTCTCTT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS GCA 90 bp | AAACCAGCTCTCATCCATCAAGGAGGGCGCGGGTGGAGGGCGGCCTaGAGGAGCAGGCGAGGCCCCGGGGTCGGGAGGAGCTGTATAGCT | + |
|
Preference number: 5 (lower is better) Translates to: KPALIHQGGRGWRAA*RSRRGPGVGRSCIA Trigger: AGCTATACAGCTCCTCCCGACCCCGGGGCCTCGCCTGCTCCTGCAGGCCGCCCTCCACCCGCGCCCTCCTTGATGGATGAGAGCTGGTTT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000043237.14 ENSMUST00000151466.8 |
||
| CDS GCA 90 bp | TTCTCCAGCAGCACAGCTCGAGCGGGCATAGGAGCAGCTGCGTGGTaGAAGGCCCTGGGTTCCCGGAGGGCAGGCGCCAGCTCTCCATCG | + |
|
Preference number: 5 (lower is better) Translates to: FSSSTARAGIGAAAW*KALGSRRAGASSPS Trigger: CGATGGAGAGCTGGCGCCTGCCCTCCGGGAACCCAGGGCCTTGCACCACGCAGCTGCTCCTATGCCCGCTCGAGCTGTGCTGCTGGAGAA 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043237.14 ENSMUST00000174685.8 |
||
| CDS TCA 90 bp | GCAAGGCCCTGGGTTCCCGGAGGGCAGGCGCCAGCTCTCCATCGCTaGGGTCCTGATCAGGCAAGGCAGCTTCAGGGTGAGGGGAAGGTG | + |
|
Preference number: 5 (lower is better) Translates to: ARPWVPGGQAPALHR*GPDQARQLQGEGKV Trigger: CACCTTCCCCTCACCCTGAAGCTGCCTTGCCTGATCAGGACCTCAGCGATGGAGAGCTGGCGCCTGCCCTCCGGGAACCCAGGGCCTTGC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000043237.14 ENSMUST00000174685.8 |
||
| CDS CCA 90 bp | TCCCGGGCGCGATTCTGCCGTTGCAACACTTTAGCACTCAATGTGTaGCGCTCAGCCCGCTGTCGGGCTCTCTGCAGCCTCCGCACCTGG | + |
|
Preference number: 5 (lower is better) Translates to: SRARFCRCNTLALNV*RSARCRALCSLRTW Trigger: CCAGGTGCGGAGGCTGCAGAGAGCCCGACAGCGGGCTGAGCGCCACACATTGAGTGCTAAAGTGTTGCAACGGCAGAATCGCGCCCGGGA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043237.14 ENSMUST00000174685.8 |
||
| CDS GCA 90 bp | ACTTTAGCACTCAATGTGTGGCGCTCAGCCCGCTGTCGGGCTCTCTaGAGCCTCCGCACCTGGCCAGCCTTCTCCAGCAGCACAGCTCGA | + |
|
Preference number: 5 (lower is better) Translates to: TLALNVWRSARCRAL*SLRTWPAFSSSTAR Trigger: TCGAGCTGTGCTGCTGGAGAAGGCTGGCCAGGTGCGGAGGCTGCAGAGAGCCCGACAGCGGGCTGAGCGCCACACATTGAGTGCTAAAGT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043237.14 ENSMUST00000174685.8 |
||
| CDS-3UTR CAA 90 bp | GTCTGGGGATGGCTTTACCTCATAGTTGTCCTCCTTAGCATCATGCCTCCTCATAAGGCCCCCGGACAGTaGGAGTCTTCAGGAGGCGCA | + |
|
Preference number: 5 (lower is better) Translates to: VWGWLYLIVVLLSIMPPHKAPGQ*ESSGGA Trigger: TGCGCCTCCTGAAGACTCCAACTGTCCGGGGGCCTT...ATGAGGAGGCATGATGCTAAGGAGGACAACTATGAGGTAAAGCCATCCCCAGAC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000043237.14 |
||
| CDS GCA 72 bp | CTCCAGCAGCACAGCTCGAGCGGGCATAGGAGCAGCTaGGTGGTGCAAGGCCCTGGGTTCCCGGAGGGCAGG | + |
|
Preference number: 6 (lower is better) Translates to: LQQHSSSGHRSS*VVQGPGFPEGR Trigger: CCTGCCCTCCGGGAACCCAGGGCCTTGCACCACGCAGCTGCTCCTATGCCCGCTCGAGCTGTGCTGCTGGAG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043237.14 ENSMUST00000174685.8 |
||
| CDS CCA 72 bp | GGATGCTCAATGAGGAGGTCCTCCAGCGGATTGCTCTaGAGGCGGGCAGGCCCAAGGCCGGGCCCCTCCTGT | + |
|
Preference number: 6 (lower is better) Translates to: GCSMRRSSSGLL*RRAGPRPGPSC Trigger: ACAGGAGGGGCCCGGCCTTGGGCCTGCCCGCCTCCAGAGCAATCCGCTGGAGGACCTCCTCATTGAGCATCC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000174685.8 |
||
| CDS GCA 72 bp | CGGCGCGAACGGCTCTCCCGGGCGCGATTCTGCCGTTaGAACACTTTAGCACTCAATGTGTGGCGCTCAGCC | + |
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Preference number: 6 (lower is better) Translates to: RRERLSRARFCR*NTLALNVWRSA Trigger: GGCTGAGCGCCACACATTGAGTGCTAAAGTGTTGCAACGGCAGAATCGCGCCCGGGAGAGCCGTTCGCGCCG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043237.14 ENSMUST00000174685.8 |
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| CDS CCA 72 bp | CGATTCTGCCGTTGCAACACTTTAGCACTCAATGTGTaGCGCTCAGCCCGCTGTCGGGCTCTCTGCAGCCTC | + |
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Preference number: 6 (lower is better) Translates to: RFCRCNTLALNV*RSARCRALCSL Trigger: GAGGCTGCAGAGAGCCCGACAGCGGGCTGAGCGCCACACATTGAGTGCTAAAGTGTTGCAACGGCAGAATCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000043237.14 ENSMUST00000174685.8 |
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| CDS CAA 72 bp | ACTTCATCCTCCTCAGAGACAAAGGCCCCCGGACAGTaGGAGTCTTCAGGAGGCGCAGGGGTGTTGAAGAAA | + |
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Preference number: 6 (lower is better) Translates to: TSSSSETKAPGQ*ESSGGAGVLKK Trigger: TTTCTTCAACACCCCTGCGCCTCCTGAAGACTCCAACTGTCCGGGGGCCTTTGTCTCTGAGGAGGATGAAGT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000043237.14 ENSMUST00000134218.2 ENSMUST00000151466.8 ENSMUST00000174685.8 |
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