Pregenerated sensors for TRP53INP1 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000028211Ensembl transcript IDs: ENSMUST00000029865.4
Found 108 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAACAGATGCCACCAGAAATCCCTTGGGAAGACAGGCTCCATGTCTaGGGAGTTACCACTGTTTCTCTCCCTTTCTTGTGGCAGACACAA | + |
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Preference number: 1 (lower is better) Translates to: KQMPPEIPWEDRLHV*GVTTVSLPFLWQTQ Trigger: TTGTGTCTGCCACAAGAAAGGGAGAGAAACAGTGGTAACTCCTCAGACATGGAGCCTGTCTTCCCAAGGGATTTCTGGTGGCATCTGTTT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR TCA 90 bp | ACTAGGTTCAGGAGAAAGACCCTGAAAGTTCACAGAGTTCAGTTCTaGCAGCCCCACTTCCAATCAGTATACAATCCTCACAACTCTGTG | + |
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Preference number: 1 (lower is better) Translates to: TRFRRKTLKVHRVQF*QPHFQSVYNPHNSV Trigger: CACAGAGTTGTGAGGATTGTATACTGATTGGAAGTGGGGCTGTCAGAACTGAACTCTGTGAACTTTCAGGGTCTTTCTCCTGAACCTAGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR TCA 90 bp | CAAATTCTGACGGCTGAACTTCCAGCTTGTAAGACAGCTTTCGTGTaGTGTAAGGGAGTAGGGGCAAAGCTACATGGATTCAGAACCTTT | + |
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Preference number: 1 (lower is better) Translates to: QILTAELPACKTAFV*CKGVGAKLHGFRTF Trigger: AAAGGTTCTGAATCCATGTAGCTTTGCCCCTACTCCCTTACATCACACGAAAGCTGTCTTACAAGCTGGAAGTTCAGCCGTCAGAATTTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR TCA 90 bp | CGCCTGCTGTGGAGGAAAGAGAGGCCAAAGTGGCTAAGGATATTGTaGAGTTTAAAAACGAAAGCTTGTGGAAACCAACCCATCAATCTT | + |
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Preference number: 1 (lower is better) Translates to: RLLWRKERPKWLRIL*SLKTKACGNQPINL Trigger: AAGATTGATGGGTTGGTTTCCACAAGCTTTCGTTTTTAAACTTCACAATATCCTTAGCCACTTTGGCCTCTCTTTCCTCCACAGCAGGCG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR CCA 90 bp | AATCTGGTTGTGATAGTGTCTAAACACACTGATACACTAGGCGATTaGTCTTCACTTGGCTGGAAGGAGACAGCACTTTCATTGTACACA | + |
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Preference number: 1 (lower is better) Translates to: NLVVIVSKHTDTLGD*SSLGWKETALSLYT Trigger: TGTGTACAATGAAAGTGCTGTCTCCTTCCAGCCAAGTGAAGACCAATCGCCTAGTGTATCAGTGTGTTTAGACACTATCACAACCAGATT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR GCA 90 bp | ACAAGGAAACTTATCAATGATACACAGAACATCATCCATTTAAGCTaGCTTCCTCTGAATAGTAACTTCTCTTCCTGCCTCTCTGCATCT | + |
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Preference number: 1 (lower is better) Translates to: TRKLINDTQNIIHLS*LPLNSNFSSCLSAS Trigger: AGATGCAGAGAGGCAGGAAGAGAAGTTACTATTCAGAGGAAGGCAGCTTAAATGGATGATGTTCTGTGTATCATTGATAAGTTTCCTTGT 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR TCA 90 bp | TTGTCCAGAAGACACTTAACTGGTCTATTTCAAGTTACCAACATATaGCCCTATAATAGCTGTGGTATAAAATATGCACACCTCCATGAC | + |
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Preference number: 1 (lower is better) Translates to: LSRRHLTGLFQVTNI*PYNSCGIKYAHLHD Trigger: GTCATGGAGGTGTGCATATTTTATACCACAGCTATTATAGGGTCATATGTTGGTAACTTGAAATAGACCAGTTAAGTGTCTTCTGGACAA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR TCA 90 bp | GCAAGCATTATTCTAGGCTATTGGTTTAGAAATGGTCAGTACTACTaGATTCTGGAGTCTTGCTTATTTTGTTTTCATCCTACAGTGCTG | + |
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Preference number: 1 (lower is better) Translates to: ASIILGYWFRNGQYY*ILESCLFCFHPTVL Trigger: CAGCACTGTAGGATGAAAACAAAATAAGCAAGACTCCAGAATTCAGTAGTACTGACCATTTCTAAACCAATAGCCTAGAATAATGCTTGC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR CCA 90 bp | CCTGTTCTTAGGAGACATCCTGCCTGGCACCTAATCAGAGCCAGTGTTAACTCTCCACCAGAAATCCCTTaGGAAGACAGGCTCCATGTC | + |
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Preference number: 2 (lower is better) Translates to: PVLRRHPAWHLIRASVNSPPEIP*EDRLHV Trigger: GACATGGAGCCTGTCTTCCCAAGGGATTTCTGGTGG...AGAGTTAACACTGGCTCTGATTAGGTGCCAGGCAGGATGTCTCCTAAGAACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR TCA 90 bp | CCTGTTCTTAGGAGACATCCTGCCTGGCACCTAATCAGAGCCAGTGTTAACTCTGACAGGCTCCATGTCTaGGGAGTTACCACTGTTTCT | + |
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Preference number: 2 (lower is better) Translates to: PVLRRHPAWHLIRASVNSDRLHV*GVTTVS Trigger: AGAAACAGTGGTAACTCCTCAGACATGGAGCCTGTC...AGAGTTAACACTGGCTCTGATTAGGTGCCAGGCAGGATGTCTCCTAAGAACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR TCA 90 bp | CCTGTTCTTAGGAGACATCCTGCCTGGCACCTAATCAGAGCCAGTGTTAACTCTTCAGGAGAAAGACCCTaGAAGTTCACAGAGTTCAGT | + |
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Preference number: 2 (lower is better) Translates to: PVLRRHPAWHLIRASVNSSGERP*KFTEFS Trigger: ACTGAACTCTGTGAACTTTCAGGGTCTTTCTCCTGA...AGAGTTAACACTGGCTCTGATTAGGTGCCAGGCAGGATGTCTCCTAAGAACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR TCA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCACACAGAGTTCAGTTCTaGCAGCCCCACTTCCAATCA | + |
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Preference number: 2 (lower is better) Translates to: KSIQRLNTSVRTEQNSKAHRVQF*QPHFQS Trigger: TGATTGGAAGTGGGGCTGTCAGAACTGAACTCTGTG...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR CAA 90 bp | CTAGGCGATTGGTCTTCACTTGGCTGGAAGGAGACAGCACTTTCATaGTACACACACACATCCAATACATATGCACAAAACCTAAGGAAA | + |
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Preference number: 2 (lower is better) Translates to: LGDWSSLGWKETALS*YTHTSNTYAQNLRK Trigger: TTTCCTTAGGTTTTGTGCATATGTATTGGATGTGTGTGTGTACAATGAAAGTGCTGTCTCCTTCCAGCCAAGTGAAGACCAATCGCCTAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR GCA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGGTATTAGTACTCGCCTaGTGTGGAGGAAAGAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: PTILFRIHSSYPAFRRKMVLVLA*CGGKRG Trigger: GCCTCTCTTTCCTCCACAGCAGGCGAGTACTAATAC...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR GCA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCAGTTTTCATCCTACAGTaGTGGGGATGGAACTCAGGA | + |
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Preference number: 2 (lower is better) Translates to: KSIQRLNTSVRTEQNSKAVFILQ*WGWNSG Trigger: TCCTGAGTTCCATCCCCAGCACTGTAGGATGAAAAC...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR CCA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGTTCATCCTACAGTGCTaGGGATGGAACTCAGGACCT | + |
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Preference number: 2 (lower is better) Translates to: PTILFRIHSSYPAFRRKMFILQC*GWNSGP Trigger: AGGTCCTGAGTTCCATCCCCAGCACTGTAGGATGAA...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR CAA 90 bp | GAGGCCAAAGTGGCTAAGGATATTGTGAAGTTTAAAAACGAAAGCTaGTGGAAACCAACCCATCAATCTTCACTTAGGCGCAAACAGATG | + |
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Preference number: 2 (lower is better) Translates to: EAKVAKDIVKFKNES*WKPTHQSSLRRKQM Trigger: CATCTGTTTGCGCCTAAGTGAAGATTGATGGGTTGGTTTCCACAAGCTTTCGTTTTTAAACTTCACAATATCCTTAGCCACTTTGGCCTC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR TCA 90 bp | CAAATAGTAACAACTTCTCAGTTTAACAAACTCTACAGACTTGGCCCCTTAATTAGCACTGTACCTTCCTaGAAGTTTCCCAGGGTTCCC | + |
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Preference number: 2 (lower is better) Translates to: QIVTTSQFNKLYRLGPLISTVPS*KFPRVP Trigger: GGGAACCCTGGGAAACTTTCAGGAAGGTACAGTGCT...AATTAAGGGGCCAAGTCTGTAGAGTTTGTTAAACTGAGAAGTTGTTACTATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR TCA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGTGGCCAAACAAATTCTaGCGGCTGAACTTCCAGCTT | + |
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Preference number: 2 (lower is better) Translates to: PTILFRIHSSYPAFRRKMWPNKF*RLNFQL Trigger: AAGCTGGAAGTTCAGCCGTCAGAATTTGTTTGGCCA...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR GCA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGCATGACGTCACTGAGTaGCTGGGCTTGTGCATTTTT | + |
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Preference number: 2 (lower is better) Translates to: PTILFRIHSSYPAFRRKMHDVTE*LGLCIF Trigger: AAAAATGCACAAGCCCAGGCACTCAGTGACGTCATG...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR CCA 90 bp | CAAATAGTAACAACTTCTCAGTTTAACAAACTCTACAGACTTGGCCCCTTAATTAGTACTCGCCTGCTGTaGAGGAAAGAGAGGCCAAAG | + |
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Preference number: 2 (lower is better) Translates to: QIVTTSQFNKLYRLGPLISTRLL*RKERPK Trigger: CTTTGGCCTCTCTTTCCTCCACAGCAGGCGAGTACT...AATTAAGGGGCCAAGTCTGTAGAGTTTGTTAAACTGAGAAGTTGTTACTATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCACCCACTTACTATAGGTaGTGTGGTAATCTTAACCCC | + |
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Preference number: 2 (lower is better) Translates to: KSIQRLNTSVRTEQNSKAPTYYR*CGNLNP Trigger: GGGGTTAAGATTACCACACCACCTATAGTAAGTGGG...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR GCA 90 bp | CAAATAGTAACAACTTCTCAGTTTAACAAACTCTACAGACTTGGCCCCTTAATTATGAGTGGAACCCTGTaGTCTAGCCTCATTAGCACC | + |
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Preference number: 2 (lower is better) Translates to: QIVTTSQFNKLYRLGPLIMSGTL*SSLIST Trigger: GGTGCTAATGAGGCTAGAGCACAGGGTTCCACTCAT...AATTAAGGGGCCAAGTCTGTAGAGTTTGTTAAACTGAGAAGTTGTTACTATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR CCA 90 bp | CAAATAGTAACAACTTCTCAGTTTAACAAACTCTACAGACTTGGCCCCTTAATTCGATTGGTCTTCACTTaGCTGGAAGGAGACAGCACT | + |
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Preference number: 2 (lower is better) Translates to: QIVTTSQFNKLYRLGPLIRLVFT*LEGDST Trigger: AGTGCTGTCTCCTTCCAGCCAAGTGAAGACCAATCG...AATTAAGGGGCCAAGTCTGTAGAGTTTGTTAAACTGAGAAGTTGTTACTATTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCAATAGAGGTAAGAGAATaGACTTTCCTCTACACCACG | + |
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Preference number: 2 (lower is better) Translates to: KSIQRLNTSVRTEQNSKAIEVRE*TFLYTT Trigger: CGTGGTGTAGAGGAAAGTCCATTCTCTTACCTCTAT...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR TCA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCATTTTCCCTCTGCATATaGAACAAATGCTTTTGGCCA | + |
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Preference number: 2 (lower is better) Translates to: KSIQRLNTSVRTEQNSKAFSLCI*NKCFWP Trigger: TGGCCAAAAGCATTTGTTTCATATGCAGAGGGAAAA...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR TCA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCACTATTCTTTAAGAGCTaGCCAGATAGAGGTAAGAGA | + |
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Preference number: 2 (lower is better) Translates to: KSIQRLNTSVRTEQNSKALFFKS*PDRGKR Trigger: TCTCTTACCTCTATCTGGTCAGCTCTTAAAGAATAG...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR GCA 90 bp | CAAATAGTAACAACTTCTCAGTTTAACAAACTCTACAGACTTGGCCCCTTAATTGACTGCAGCTCTAAATaGCCAGCCTCATCAGAGAAA | + |
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Preference number: 2 (lower is better) Translates to: QIVTTSQFNKLYRLGPLIDCSSK*PASSEK Trigger: TTTCTCTGATGAGGCTGGGCATTTAGAGCTGCAGTC...AATTAAGGGGCCAAGTCTGTAGAGTTTGTTAAACTGAGAAGTTGTTACTATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR CCA 90 bp | CAAATAGTAACAACTTCTCAGTTTAACAAACTCTACAGACTTGGCCCCTTAATTTGGTCTTCACTTGGCTaGAAGGAGACAGCACTTTCA | + |
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Preference number: 2 (lower is better) Translates to: QIVTTSQFNKLYRLGPLIWSSLG*KETALS Trigger: TGAAAGTGCTGTCTCCTTCCAGCCAAGTGAAGACCA...AATTAAGGGGCCAAGTCTGTAGAGTTTGTTAAACTGAGAAGTTGTTACTATTTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR TCA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGAATGGTCAGTACTACTaGATTCTGGAGTCTTGCTTA | + |
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Preference number: 2 (lower is better) Translates to: PTILFRIHSSYPAFRRKMNGQYY*ILESCL Trigger: TAAGCAAGACTCCAGAATTCAGTAGTACTGACCATT...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR GCA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGAGTAACTTCTCTTCCTaGCTCTCTGCATCTATTCTT | + |
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Preference number: 2 (lower is better) Translates to: PTILFRIHSSYPAFRRKMSNFSS*LSASIL Trigger: AAGAATAGATGCAGAGAGGCAGGAAGAGAAGTTACT...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCAAAAAACGAAAGCTTGTaGAAACCAACCCATCAATCT | + |
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Preference number: 2 (lower is better) Translates to: KSIQRLNTSVRTEQNSKAKNESL*KPTHQS Trigger: AGATTGATGGGTTGGTTTCCACAAGCTTTCGTTTTT...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 39% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR CCA 90 bp | CAAATAGTAACAACTTCTCAGTTTAACAAACTCTACAGACTTGGCCCCTTAATTTCCAGCAAGTGTGGATaGCTCATCAAAATCCACCAA | + |
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Preference number: 2 (lower is better) Translates to: QIVTTSQFNKLYRLGPLISSKCG*LIKIHQ Trigger: TTGGTGGATTTTGATGAGCCATCCACACTTGCTGGA...AATTAAGGGGCCAAGTCTGTAGAGTTTGTTAAACTGAGAAGTTGTTACTATTTG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR TCA 90 bp | CAAATAGTAACAACTTCTCAGTTTAACAAACTCTACAGACTTGGCCCCTTAATTATCATCTCATGGGTCTaGTTTTTCCCTCTGCATATG | + |
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Preference number: 2 (lower is better) Translates to: QIVTTSQFNKLYRLGPLIIISWV*FFPLHM Trigger: CATATGCAGAGGGAAAAATCAGACCCATGAGATGAT...AATTAAGGGGCCAAGTCTGTAGAGTTTGTTAAACTGAGAAGTTGTTACTATTTG 38% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR GCA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGATCATCCATTTAAGCTaGCTTCCTCTGAATAGTAAC | + |
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Preference number: 2 (lower is better) Translates to: PTILFRIHSSYPAFRRKMIIHLS*LPLNSN Trigger: GTTACTATTCAGAGGAAGGCAGCTTAAATGGATGAT...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCAAAGGCTATCAAGTACTaGTCAATAAAGTATATGGCT | + |
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Preference number: 2 (lower is better) Translates to: KSIQRLNTSVRTEQNSKAKAIKY*SIKYMA Trigger: AGCCATATACTTTATTGACCAGTACTTGATAGCCTT...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR CCA 90 bp | CAAATAGTAACAACTTCTCAGTTTAACAAACTCTACAGACTTGGCCCCTTAATTATCTTCCAGCAAGTGTaGATGGCTCATCAAAATCCA | + |
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Preference number: 2 (lower is better) Translates to: QIVTTSQFNKLYRLGPLIIFQQV*MAHQNP Trigger: TGGATTTTGATGAGCCATCCACACTTGCTGGAAGAT...AATTAAGGGGCCAAGTCTGTAGAGTTTGTTAAACTGAGAAGTTGTTACTATTTG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR CCA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCACAGAAGACACTTAACTaGTCTATTTCAAGTTACCAA | + |
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Preference number: 2 (lower is better) Translates to: KSIQRLNTSVRTEQNSKAQKTLN*SISSYQ Trigger: TTGGTAACTTGAAATAGACCAGTTAAGTGTCTTCTG...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR GCA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGCACATCCAATACATATaGACAAAACCTAAGGAAACA | + |
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Preference number: 2 (lower is better) Translates to: PTILFRIHSSYPAFRRKMHIQYI*TKPKET Trigger: TGTTTCCTTAGGTTTTGTGCATATGTATTGGATGTG...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR CCA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGAAGGGGAAGTCAATATaGAAAAGACTTAAGGAAAGA | + |
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Preference number: 2 (lower is better) Translates to: PTILFRIHSSYPAFRRKMKGKSI*KRLKER Trigger: TCTTTCCTTAAGTCTTTTCCATATTGACTTCCCCTT...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR CCA 72 bp | CTTGTGGCAGACACAAGCATGACGTCACTGAGTGCCTaGGCTTGTGCATTTTTAGCTGAGCTGGCAGTTAGG | + |
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Preference number: 3 (lower is better) Translates to: LVADTSMTSLSA*ACAFLAELAVR Trigger: CCTAACTGCCAGCTCAGCTAAAAATGCACAAGCCCAGGCACTCAGTGACGTCATGCTTGTGTCTGCCACAAG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR TCA 72 bp | CGTAGCCTCCCACAACTAGGTTCAGGAGAAAGACCCTaGAAGTTCACAGAGTTCAGTTCTGACAGCCCCACT | + |
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Preference number: 3 (lower is better) Translates to: RSLPQLGSGERP*KFTEFSSDSPT Trigger: AGTGGGGCTGTCAGAACTGAACTCTGTGAACTTTCAGGGTCTTTCTCCTGAACCTAGTTGTGGGAGGCTACG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR TCA 72 bp | TGCCCAGCCTCATCAGAGAAAAGCACTGTACCTTCCTaGAAGTTTCCCAGGGTTCCCTGCATCAAGCTGCTT | + |
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Preference number: 3 (lower is better) Translates to: CPASSEKSTVPS*KFPRVPCIKLL Trigger: AAGCAGCTTGATGCAGGGAACCCTGGGAAACTTTCAGGAAGGTACAGTGCTTTTCTCTGATGAGGCTGGGCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR TCA 72 bp | ACGGCTGAACTTCCAGCTTGTAAGACAGCTTTCGTGTaGTGTAAGGGAGTAGGGGCAAAGCTACATGGATTC | + |
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Preference number: 3 (lower is better) Translates to: TAELPACKTAFV*CKGVGAKLHGF Trigger: GAATCCATGTAGCTTTGCCCCTACTCCCTTACATCACACGAAAGCTGTCTTACAAGCTGGAAGTTCAGCCGT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR CCA 72 bp | TCTCCTGCTGTGGTAAGTATTAGTACTCGCCTGCTGTaGAGGAAAGAGAGGCCAAAGTGGCTAAGGATATTG | + |
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Preference number: 3 (lower is better) Translates to: SPAVVSISTRLL*RKERPKWLRIL Trigger: CAATATCCTTAGCCACTTTGGCCTCTCTTTCCTCCACAGCAGGCGAGTACTAATACTTACCACAGCAGGAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR CAA 90 bp | CCTGTTCTTAGGAGACATCCTGCCTGGCACCTAATCAGAGCCAGTGTTAACTCTGAGACAGCACTTTCATaGTACACACACACATCCAAT | + |
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Preference number: 3 (lower is better) Translates to: PVLRRHPAWHLIRASVNSETALS*YTHTSN Trigger: ATTGGATGTGTGTGTGTACAATGAAAGTGCTGTCTC...AGAGTTAACACTGGCTCTGATTAGGTGCCAGGCAGGATGTCTCCTAAGAACAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| 3UTR-3UTR CAA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCAGCCACCAGAAATCCCTaGGGAAGACAGGCTCCATGT | + |
|
Preference number: 3 (lower is better) Translates to: KSIQRLNTSVRTEQNSKAATRNP*GRQAPC Trigger: ACATGGAGCCTGTCTTCCCAAGGGATTTCTGGTGGC...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR CCA 72 bp | CACACTGATACACTAGGCGATTGGTCTTCACTTGGCTaGAAGGAGACAGCACTTTCATTGTACACACACACA | + |
|
Preference number: 3 (lower is better) Translates to: HTDTLGDWSSLG*KETALSLYTHT Trigger: TGTGTGTGTGTACAATGAAAGTGCTGTCTCCTTCCAGCCAAGTGAAGACCAATCGCCTAGTGTATCAGTGTG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR TCA 72 bp | AGGAGAAAGACCCTGAAAGTTCACAGAGTTCAGTTCTaGCAGCCCCACTTCCAATCAGTATACAATCCTCAC | + |
|
Preference number: 3 (lower is better) Translates to: RRKTLKVHRVQF*QPHFQSVYNPH Trigger: GTGAGGATTGTATACTGATTGGAAGTGGGGCTGTCAGAACTGAACTCTGTGAACTTTCAGGGTCTTTCTCCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR CCA 72 bp | GTGATAGTGTCTAAACACACTGATACACTAGGCGATTaGTCTTCACTTGGCTGGAAGGAGACAGCACTTTCA | + |
|
Preference number: 3 (lower is better) Translates to: VIVSKHTDTLGD*SSLGWKETALS Trigger: TGAAAGTGCTGTCTCCTTCCAGCCAAGTGAAGACCAATCGCCTAGTGTATCAGTGTGTTTAGACACTATCAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR-3UTR CAA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGATGGAACTCAGGACCTaGCACATGCTAGGCAAATCC | + |
|
Preference number: 3 (lower is better) Translates to: PTILFRIHSSYPAFRRKMMELRT*HMLGKS Trigger: GGATTTGCCTAGCATGTGCAAGGTCCTGAGTTCCAT...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR TCA 72 bp | TGGAGGAAAGAGAGGCCAAAGTGGCTAAGGATATTGTaGAGTTTAAAAACGAAAGCTTGTGGAAACCAACCC | + |
|
Preference number: 3 (lower is better) Translates to: WRKERPKWLRIL*SLKTKACGNQP Trigger: GGGTTGGTTTCCACAAGCTTTCGTTTTTAAACTTCACAATATCCTTAGCCACTTTGGCCTCTCTTTCCTCCA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR GCA 72 bp | CTTCCTGAAAGTTTCCCAGGGTTCCCTGCATCAAGCTaGTTCAGGAATAATACTTCACATAACAGTATGTTT | + |
|
Preference number: 3 (lower is better) Translates to: LPESFPGFPASS*FRNNTSHNSMF Trigger: AAACATACTGTTATGTGAAGTATTATTCCTGAAGCAGCTTGATGCAGGGAACCCTGGGAAACTTTCAGGAAG 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR-3UTR CAA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGAGGGAAATGAGCACTTaGAATATGCGGCAATGGTAT | + |
|
Preference number: 3 (lower is better) Translates to: PTILFRIHSSYPAFRRKMREMST*NMRQWY Trigger: ATACCATTGCCGCATATTCAAAGTGCTCATTTCCCT...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCATGTACTTTCAGTGCATaGAAGAACACTGTAAACCAC | + |
|
Preference number: 3 (lower is better) Translates to: KSIQRLNTSVRTEQNSKACTFSA*KNTVNH Trigger: GTGGTTTACAGTGTTCTTCAATGCACTGAAAGTACA...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR GCA 72 bp | CTTATCAATGATACACAGAACATCATCCATTTAAGCTaGCTTCCTCTGAATAGTAACTTCTCTTCCTGCCTC | + |
|
Preference number: 3 (lower is better) Translates to: LINDTQNIIHLS*LPLNSNFSSCL Trigger: GAGGCAGGAAGAGAAGTTACTATTCAGAGGAAGGCAGCTTAAATGGATGATGTTCTGTGTATCATTGATAAG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR-3UTR CAA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGTGTCTACTCTTAGACTaGGGGTTAGAAATGTCCTTA | + |
|
Preference number: 3 (lower is better) Translates to: PTILFRIHSSYPAFRRKMCLLLD*GLEMSL Trigger: TAAGGACATTTCTAACCCCAAGTCTAAGAGTAGACA...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR-3UTR CAA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCATTTAAAAACGAAAGCTaGTGGAAACCAACCCATCAA | + |
|
Preference number: 3 (lower is better) Translates to: KSIQRLNTSVRTEQNSKAFKNES*WKPTHQ Trigger: TTGATGGGTTGGTTTCCACAAGCTTTCGTTTTTAAA...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR-3UTR CAA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGTTGGGGTCTTCTTACTaGTACTTTCAGTGCATTGAA | + |
|
Preference number: 3 (lower is better) Translates to: PTILFRIHSSYPAFRRKMLGSSY*YFQCIE Trigger: TTCAATGCACTGAAAGTACAAGTAAGAAGACCCCAA...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR TCA 72 bp | GCTCATCAAAATCCACCAAAACTATTCTTTAAGAGCTaGCCAGATAGAGGTAAGAGAATGGACTTTCCTCTA | + |
|
Preference number: 3 (lower is better) Translates to: AHQNPPKLFFKS*PDRGKRMDFPL Trigger: TAGAGGAAAGTCCATTCTCTTACCTCTATCTGGTCAGCTCTTAAAGAATAGTTTTGGTGGATTTTGATGAGC 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR CCA 72 bp | GCTAAGGATATTGTGAAGTTTAAAAACGAAAGCTTGTaGAAACCAACCCATCAATCTTCACTTAGGCGCAAA | + |
|
Preference number: 3 (lower is better) Translates to: AKDIVKFKNESL*KPTHQSSLRRK Trigger: TTTGCGCCTAAGTGAAGATTGATGGGTTGGTTTCCACAAGCTTTCGTTTTTAAACTTCACAATATCCTTAGC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR TCA 72 bp | TTTAACAAAAGCGAAGACTGTAAACCTGTACAGATTTaGGAAACAAAAACGACAACCAGACATATGAACCCT | + |
|
Preference number: 3 (lower is better) Translates to: FNKSEDCKPVQI*ETKTTTRHMNP Trigger: AGGGTTCATATGTCTGGTTGTCGTTTTTGTTTCTCAAATCTGTACAGGTTTACAGTCTTCGCTTTTGTTAAA 36% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR TCA 72 bp | ATTCTAGGCTATTGGTTTAGAAATGGTCAGTACTACTaGATTCTGGAGTCTTGCTTATTTTGTTTTCATCCT | + |
|
Preference number: 3 (lower is better) Translates to: ILGYWFRNGQYY*ILESCLFCFHP Trigger: AGGATGAAAACAAAATAAGCAAGACTCCAGAATTCAGTAGTACTGACCATTTCTAAACCAATAGCCTAGAAT 35% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR TCA 72 bp | AGAAACATTTTTCAATACCACAAGGAAACTTATCAATaGTACACAGAACATCATCCATTTAAGCTGCCTTCC | + |
|
Preference number: 3 (lower is better) Translates to: RNIFQYHKETYQ*YTEHHPFKLPS Trigger: GGAAGGCAGCTTAAATGGATGATGTTCTGTGTATCATTGATAAGTTTCCTTGTGGTATTGAAAAATGTTTCT 35% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR CCA 90 bp | CCTGTTCTTAGGAGACATCCTGCCTGGCACCTAATCAGAGCCAGTGTTAACTCTGTAATTGTACTGGCGTaGGCAGGGCTGGTGAACCAC | + |
|
Preference number: 4 (lower is better) Translates to: PVLRRHPAWHLIRASVNSVIVLA*AGLVNH Trigger: GTGGTTCACCAGCCCTGCCCACGCCAGTACAATTAC...AGAGTTAACACTGGCTCTGATTAGGTGCCAGGCAGGATGTCTCCTAAGAACAGG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR GCA 90 bp | CCTGTTCTTAGGAGACATCCTGCCTGGCACCTAATCAGAGCCAGTGTTAACTCTCTGAGCAGCAAGTGCTaGCACACAGCAGTGAATGTG | + |
|
Preference number: 4 (lower is better) Translates to: PVLRRHPAWHLIRASVNSLSSKC*HTAVNV Trigger: CACATTCACTGCTGTGTGGCAGCACTTGCTGCTCAG...AGAGTTAACACTGGCTCTGATTAGGTGCCAGGCAGGATGTCTCCTAAGAACAGG 51% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR TCA 90 bp | CCTGTTCTTAGGAGACATCCTGCCTGGCACCTAATCAGAGCCAGTGTTAACTCTAGAAGTGTGCTCTGCTaGGGACTCTTCACCAATGTC | + |
|
Preference number: 4 (lower is better) Translates to: PVLRRHPAWHLIRASVNSRSVLC*GLFTNV Trigger: GACATTGGTGAAGAGTCCTCAGCAGAGCACACTTCT...AGAGTTAACACTGGCTCTGATTAGGTGCCAGGCAGGATGTCTCCTAAGAACAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR GCA 90 bp | CCTGTTCTTAGGAGACATCCTGCCTGGCACCTAATCAGAGCCAGTGTTAACTCTGAGAAGACAGAAGTGTaGTCTGCTGAGGACTCTTCA | + |
|
Preference number: 4 (lower is better) Translates to: PVLRRHPAWHLIRASVNSEKTEV*SAEDSS Trigger: TGAAGAGTCCTCAGCAGAGCACACTTCTGTCTTCTC...AGAGTTAACACTGGCTCTGATTAGGTGCCAGGCAGGATGTCTCCTAAGAACAGG 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR TCA 90 bp | CCTGTTCTTAGGAGACATCCTGCCTGGCACCTAATCAGAGCCAGTGTTAACTCTCATCTTCTTTCTCACTaGATTCTGGTTCTTGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: PVLRRHPAWHLIRASVNSHLLSH*ILVLGW Trigger: CCAGCCAAGAACCAGAATTCAGTGAGAAAGAAGATG...AGAGTTAACACTGGCTCTGATTAGGTGCCAGGCAGGATGTCTCCTAAGAACAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR CCA 90 bp | CCTGTTCTTAGGAGACATCCTGCCTGGCACCTAATCAGAGCCAGTGTTAACTCTCTGAATTCTGGTTCTTaGCTGGAAGAAGTAGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: PVLRRHPAWHLIRASVNSLNSGS*LEEVVT Trigger: AGTCACTACTTCTTCCAGCCAAGAACCAGAATTCAG...AGAGTTAACACTGGCTCTGATTAGGTGCCAGGCAGGATGTCTCCTAAGAACAGG 47% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR TCA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCAGGACAGGACTCAAACTaGAGGAAGCAGGAATCACTG | + |
|
Preference number: 4 (lower is better) Translates to: KSIQRLNTSVRTEQNSKAGQDSN*RKQESL Trigger: CAGTGATTCCTGCTTCCTTCAGTTTGAGTCCTGTCC...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR GCA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGTGCCTGAGCAGCAAGTaGTGCCACACAGCAGTGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PTILFRIHSSYPAFRRKMCLSSK*CHTAVN Trigger: ATTCACTGCTGTGTGGCAGCACTTGCTGCTCAGGCA...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR CCA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGTCCCTGGTAAGGTTCTaGCGACGGAGACCATTTCTG | + |
|
Preference number: 4 (lower is better) Translates to: PTILFRIHSSYPAFRRKMSLVRF*RRRPFL Trigger: CAGAAATGGTCTCCGTCGCCAGAACCTTACCAGGGA...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR CAA 72 bp | TATTCTTGGTCTCTCCCTGCACCTAAGCCACTTGAATaGGTGTCACATTTCAAGAGAAACTGGCCTATGACA | + |
|
Preference number: 4 (lower is better) Translates to: YSWSLPAPKPLE*VSHFKRNWPMT Trigger: TGTCATAGGCCAGTTTCTCTTGAAATGTGACACCAATTCAAGTGGCTTAGGTGCAGGGAGAGACCAAGAATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCAGGAAGCAGGAATCACTaGTGTCAGTCAAGCATTCCA | + |
|
Preference number: 4 (lower is better) Translates to: KSIQRLNTSVRTEQNSKAGSRNH*CQSSIP Trigger: TGGAATGCTTGACTGACACCAGTGATTCCTGCTTCC...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR CAA 72 bp | TGGTCAGTACTACTGAATTCTGGAGTCTTGCTTATTTaGTTTTCATCCTACAGTGCTGGGGATGGAACTCAG | + |
|
Preference number: 4 (lower is better) Translates to: WSVLLNSGVLLI*FSSYSAGDGTQ Trigger: CTGAGTTCCATCCCCAGCACTGTAGGATGAAAACAAAATAAGCAAGACTCCAGAATTCAGTAGTACTGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR TCA 90 bp | CAAATAGTAACAACTTCTCAGTTTAACAAACTCTACAGACTTGGCCCCTTAATTGCTGCCACACAGCAGTaGATGTGCTTCCCCATTTCA | + |
|
Preference number: 4 (lower is better) Translates to: QIVTTSQFNKLYRLGPLIAATQQ*MCFPIS Trigger: TGAAATGGGGAAGCACATTCACTGCTGTGTGGCAGC...AATTAAGGGGCCAAGTCTGTAGAGTTTGTTAAACTGAGAAGTTGTTACTATTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR GCA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCATTGTTCCAAAAATGTTaGCTGAGCAGCAAGTGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: KSIQRLNTSVRTEQNSKALFQKC*LSSKCC Trigger: GCAGCACTTGCTGCTCAGGCAACATTTTTGGAACAA...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR CCA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGACCTGCTGTAAAACATaGGGGAGGAGTGATGAACCA | + |
|
Preference number: 4 (lower is better) Translates to: PTILFRIHSSYPAFRRKMTCCKT*GRSDEP Trigger: TGGTTCATCACTCCTCCCCCATGTTTTACAGCAGGT...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR CCA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCATTCATTTGTCGAGTGTaGCAATCCCTGGTAAGGTTC | + |
|
Preference number: 4 (lower is better) Translates to: KSIQRLNTSVRTEQNSKAFICRV*QSLVRF Trigger: GAACCTTACCAGGGATTGCCACACTCGACAAATGAA...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| 3UTR CAA 72 bp | GTGGCTAAGGATATTGTGAAGTTTAAAAACGAAAGCTaGTGGAAACCAACCCATCAATCTTCACTTAGGCGC | + |
|
Preference number: 4 (lower is better) Translates to: VAKDIVKFKNES*WKPTHQSSLRR Trigger: GCGCCTAAGTGAAGATTGATGGGTTGGTTTCCACAAGCTTTCGTTTTTAAACTTCACAATATCCTTAGCCAC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR TCA 90 bp | CAAATAGTAACAACTTCTCAGTTTAACAAACTCTACAGACTTGGCCCCTTAATTTCCAAAAATGTTGCCTaGGCAGCAAGTGCTGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QIVTTSQFNKLYRLGPLISKNVA*AASAAT Trigger: TGTGGCAGCACTTGCTGCTCAGGCAACATTTTTGGA...AATTAAGGGGCCAAGTCTGTAGAGTTTGTTAAACTGAGAAGTTGTTACTATTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR CCA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGTGTCCTTTTATCCACTaGGAAGGGCGAAAACTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: PTILFRIHSSYPAFRRKMCPFIH*EGRKLL Trigger: CAAGAGTTTTCGCCCTTCCCAGTGGATAAAAGGACA...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR TCA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGCAGGGCAGGTATCTATaGAGTCAACAAGAATCCATT | + |
|
Preference number: 4 (lower is better) Translates to: PTILFRIHSSYPAFRRKMQGRYL*SQQESI Trigger: AATGGATTCTTGTTGACTTCATAGATACCTGCCCTG...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR TCA 90 bp | CAAATAGTAACAACTTCTCAGTTTAACAAACTCTACAGACTTGGCCCCTTAATTCATTCTGGGACCACTTaGGTTATATTCATCATTTCC | + |
|
Preference number: 4 (lower is better) Translates to: QIVTTSQFNKLYRLGPLIHSGTT*VIFIIS Trigger: GGAAATGATGAATATAACTCAAGTGGTCCCAGAATG...AATTAAGGGGCCAAGTCTGTAGAGTTTGTTAAACTGAGAAGTTGTTACTATTTG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR CCA 90 bp | CAAATAGTAACAACTTCTCAGTTTAACAAACTCTACAGACTTGGCCCCTTAATTAAGGGCGAAAACTCTTaGGTTGTTCCAAAAATGTTG | + |
|
Preference number: 4 (lower is better) Translates to: QIVTTSQFNKLYRLGPLIKGENS*VVPKML Trigger: CAACATTTTTGGAACAACCCAAGAGTTTTCGCCCTT...AATTAAGGGGCCAAGTCTGTAGAGTTTGTTAAACTGAGAAGTTGTTACTATTTG 37% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS TCA 90 bp | GGAGGAGTGATGAACCAGCTCTCCTCCATTGGACAGGACTCAAACTaGAGGAAGCAGGAATCACTGGTGTCAGTCAAGCATTCCAAAGAT | + |
|
Preference number: 5 (lower is better) Translates to: GGVMNQLSSIGQDSN*RKQESLVSVKHSKD Trigger: ATCTTTGGAATGCTTGACTGACACCAGTGATTCCTGCTTCCTTCAGTTTGAGTCCTGTCCAATGGAGGAGAGCTGGTTCATCACTCCTCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS TCA 90 bp | TGGGACCACTTGAGTTATATTCATCATTTCCACAACTCGCCTCACTaGGACCAGGACAGGAGTTGTGCACAGCATAGACAGACATGCTGG | + |
|
Preference number: 5 (lower is better) Translates to: WDHLSYIHHFHNSPH*DQDRSCAQHRQTCW Trigger: CCAGCATGTCTGTCTATGCTGTGCACAACTCCTGTCCTGGTCTCAGTGAGGCGAGTTGTGGAAATGATGAATATAACTCAAGTGGTCCCA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS CCA 90 bp | CCACTGTGCTTCATTTGTCGAGTGTGGCAATCCCTGGTAAGGTTCTaGCGACGGAGACCATTTCTGTTCAAAGACTGTCTTTCACTGTGT | + |
|
Preference number: 5 (lower is better) Translates to: PLCFICRVWQSLVRF*RRRPFLFKDCLSLC Trigger: ACACAGTGAAAGACAGTCTTTGAACAGAAATGGTCTCCGTCGCCAGAACCTTACCAGGGATTGCCACACTCGACAAATGAAGCACAGTGG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS CCA 90 bp | CACAGCAGTGAATGTGCTTCCCCATTTCACTCTGGGCTTCCATTCTaGGACCACTTGAGTTATATTCATCATTTCCACAACTCGCCTCAC | + |
|
Preference number: 5 (lower is better) Translates to: HSSECASPFHSGLPF*DHLSYIHHFHNSPH Trigger: GTGAGGCGAGTTGTGGAAATGATGAATATAACTCAAGTGGTCCCAGAATGGAAGCCCAGAGTGAAATGGGGAAGCACATTCACTGCTGTG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR CAA 90 bp | AAGAGTATACAGAGACTGAATACCTCTGTGAGGACAGAGCAAAATAGCAAAGCAACCAGCTCTCCTCCATaGGACAGGACTCAAACTGAA | + |
|
Preference number: 5 (lower is better) Translates to: KSIQRLNTSVRTEQNSKATSSPP*DRTQTE Trigger: TTCAGTTTGAGTCCTGTCCAATGGAGGAGAGCTGGT...TGCTTTGCTATTTTGCTCTGTCCTCACAGAGGTATTCAGTCTCTGTATACTCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR CAA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGGCCACTGTGCTTCATTaGTCGAGTGTGGCAATCCCT | + |
|
Preference number: 5 (lower is better) Translates to: PTILFRIHSSYPAFRRKMATVLH*SSVAIP Trigger: AGGGATTGCCACACTCGACAAATGAAGCACAGTGGC...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR CAA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGGTTGTTCCAAAAATGTaGCCTGAGCAGCAAGTGCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTILFRIHSSYPAFRRKMVVPKM*PEQQVL Trigger: CAGCACTTGCTGCTCAGGCAACATTTTTGGAACAAC...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
||
| CDS-3UTR CAA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGACTGAATTCTGGTTCTaGGCTGGAAGAAGTAGTGAC | + |
|
Preference number: 5 (lower is better) Translates to: PTILFRIHSSYPAFRRKMTEFWF*AGRSSD Trigger: GTCACTACTTCTTCCAGCCAAGAACCAGAATTCAGT...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| CDS-3UTR CAA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGGGACTTGTTTCCACCTaGATAGTGGTTAATCCACCT | + |
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Preference number: 5 (lower is better) Translates to: PTILFRIHSSYPAFRRKMGLVST*IVVNPP Trigger: AGGTGGATTAACCACTATCAAGGTGGAAACAAGTCC...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| CDS-3UTR CAA 90 bp | CCTACAATACTTTTCAGAATCCATAGCTCATATCCTGCCTTCAGAAGGAAAATGGAAGGGCGAAAACTCTaGGGTTGTTCCAAAAATGTT | + |
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Preference number: 5 (lower is better) Translates to: PTILFRIHSSYPAFRRKMEGRKL*GCSKNV Trigger: AACATTTTTGGAACAACCCAAGAGTTTTCGCCCTTC...CATTTTCCTTCTGAAGGCAGGATATGAGCTATGGATTCTGAAAAGTATTGTAGG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| CDS CAA 90 bp | CTGGCGTGGGCAGGGCTGGTGAACCACCCAGCCACTGTGCTTCATTaGTCGAGTGTGGCAATCCCTGGTAAGGTTCTGGCGACGGAGACC | + |
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Preference number: 6 (lower is better) Translates to: LAWAGLVNHPATVLH*SSVAIPGKVLATET Trigger: GGTCTCCGTCGCCAGAACCTTACCAGGGATTGCCACACTCGACAAATGAAGCACAGTGGCTGGGTGGTTCACCAGCCCTGCCCACGCCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| CDS CAA 72 bp | GCAGGGCTGGTGAACCACCCAGCCACTGTGCTTCATTaGTCGAGTGTGGCAATCCCTGGTAAGGTTCTGGCG | + |
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Preference number: 6 (lower is better) Translates to: AGLVNHPATVLH*SSVAIPGKVLA Trigger: CGCCAGAACCTTACCAGGGATTGCCACACTCGACAAATGAAGCACAGTGGCTGGGTGGTTCACCAGCCCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| CDS CAA 72 bp | GGGAAGGGCGAAAACTCTTGGGTTGTTCCAAAAATGTaGCCTGAGCAGCAAGTGCTGCCACACAGCAGTGAA | + |
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Preference number: 6 (lower is better) Translates to: GKGENSWVVPKM*PEQQVLPHSSE Trigger: TTCACTGCTGTGTGGCAGCACTTGCTGCTCAGGCAACATTTTTGGAACAACCCAAGAGTTTTCGCCCTTCCC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| CDS CAA 90 bp | TTATCCACTGGGAAGGGCGAAAACTCTTGGGTTGTTCCAAAAATGTaGCCTGAGCAGCAAGTGCTGCCACACAGCAGTGAATGTGCTTCC | + |
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Preference number: 6 (lower is better) Translates to: LSTGKGENSWVVPKM*PEQQVLPHSSECAS Trigger: GGAAGCACATTCACTGCTGTGTGGCAGCACTTGCTGCTCAGGCAACATTTTTGGAACAACCCAAGAGTTTTCGCCCTTCCCAGTGGATAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| CDS GCA 72 bp | CTTGGGTTGTTCCAAAAATGTTGCCTGAGCAGCAAGTaGTGCCACACAGCAGTGAATGTGCTTCCCCATTTC | + |
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Preference number: 6 (lower is better) Translates to: LGLFQKCCLSSK*CHTAVNVLPHF Trigger: GAAATGGGGAAGCACATTCACTGCTGTGTGGCAGCACTTGCTGCTCAGGCAACATTTTTGGAACAACCCAAG 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| CDS TCA 72 bp | ATGAACCAGCTCTCCTCCATTGGACAGGACTCAAACTaGAGGAAGCAGGAATCACTGGTGTCAGTCAAGCAT | + |
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Preference number: 6 (lower is better) Translates to: MNQLSSIGQDSN*RKQESLVSVKH Trigger: ATGCTTGACTGACACCAGTGATTCCTGCTTCCTTCAGTTTGAGTCCTGTCCAATGGAGGAGAGCTGGTTCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| CDS CCA 72 bp | TTCATTTGTCGAGTGTGGCAATCCCTGGTAAGGTTCTaGCGACGGAGACCATTTCTGTTCAAAGACTGTCTT | + |
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Preference number: 6 (lower is better) Translates to: FICRVWQSLVRF*RRRPFLFKDCL Trigger: AAGACAGTCTTTGAACAGAAATGGTCTCCGTCGCCAGAACCTTACCAGGGATTGCCACACTCGACAAATGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| CDS CAA 72 bp | TCCCCATTTCACTCTGGGCTTCCATTCTGGGACCACTaGAGTTATATTCATCATTTCCACAACTCGCCTCAC | + |
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Preference number: 6 (lower is better) Translates to: SPFHSGLPFWDH*SYIHHFHNSPH Trigger: GTGAGGCGAGTTGTGGAAATGATGAATATAACTCAAGTGGTCCCAGAATGGAAGCCCAGAGTGAAATGGGGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| CDS TCA 72 bp | TTGAGTTATATTCATCATTTCCACAACTCGCCTCACTaGGACCAGGACAGGAGTTGTGCACAGCATAGACAG | + |
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Preference number: 6 (lower is better) Translates to: LSYIHHFHNSPH*DQDRSCAQHRQ Trigger: CTGTCTATGCTGTGCACAACTCCTGTCCTGGTCTCAGTGAGGCGAGTTGTGGAAATGATGAATATAACTCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| CDS CCA 72 bp | TTGGACAGGACTCAAACTGAAGGAAGCAGGAATCACTaGTGTCAGTCAAGCATTCCAAAGATGCAGGTAAAC | + |
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Preference number: 6 (lower is better) Translates to: LDRTQTEGSRNH*CQSSIPKMQVN Trigger: GTTTACCTGCATCTTTGGAATGCTTGACTGACACCAGTGATTCCTGCTTCCTTCAGTTTGAGTCCTGTCCAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| CDS CCA 72 bp | GAATGTGCTTCCCCATTTCACTCTGGGCTTCCATTCTaGGACCACTTGAGTTATATTCATCATTTCCACAAC | + |
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Preference number: 6 (lower is better) Translates to: ECASPFHSGLPF*DHLSYIHHFHN Trigger: GTTGTGGAAATGATGAATATAACTCAAGTGGTCCCAGAATGGAAGCCCAGAGTGAAATGGGGAAGCACATTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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| CDS TCA 72 bp | CCTCTTCCTCTGCTGAGAAACCAGGGCAGGTATCTATaGAGTCAACAAGAATCCATTCATCATCTTCTTTCT | + |
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Preference number: 6 (lower is better) Translates to: PLPLLRNQGRYL*SQQESIHHLLS Trigger: AGAAAGAAGATGATGAATGGATTCTTGTTGACTTCATAGATACCTGCCCTGGTTTCTCAGCAGAGGAAGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000029865.4 |
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