Pregenerated sensors for TRP53I11 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000068735Ensembl transcript IDs: ENSMUST00000090554.11, ENSMUST00000111266.8, ENSMUST00000150462.8
Found 115 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CTGTCACTCCTAGAATCCCAGGAGACCCAAGATGACTCCGTGGAGTaGCTGGGAGGGAAGGAAGGCGTGTGCACCCTGCCTGCCTGCAGG | + |
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Preference number: 1 (lower is better) Translates to: LSLLESQETQDDSVE*LGGKEGVCTLPACR Trigger: CCTGCAGGCAGGCAGGGTGCACACGCCTTCCTTCCCTCCCAGGCACTCCACGGAGTCATCTTGGGTCTCCTGGGATTCTAGGAGTGACAG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR GCA 90 bp | CTTGGCAGCAGGAACAACCGAGCCCAGGGAGGCTGTGAGCCCAGGTaGCCTAGAGAAAGATTCCTCGGGTATAGGGGACCACCCCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: LGSRNNRAQGGCEPR*PRERFLGYRGPPPC Trigger: GCAAGGGGGTGGTCCCCTATACCCGAGGAATCTTTCTCTAGGGCACCTGGGCTCACAGCCTCCCTGGGCTCGGTTGTTCCTGCTGCCAAG 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR CCA 90 bp | GGGGTGGGGGAGAGCAGTCAGGGCACTCTGAGCCCAGACTCAGAGTaGGGCTCTATCTCCATCACTGCCTCCTTCCAAGCAGGTGTCTCC | + |
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Preference number: 1 (lower is better) Translates to: GVGESSQGTLSPDSE*GSISITASFQAGVS Trigger: GGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATAGAGCCCCACTCTGAGTCTGGGCTCAGAGTGCCCTGACTGCTCTCCCCCACCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR TCA 90 bp | GCCACAGCCTGGTCTGTCACTCCTAGAATCCCAGGAGACCCAAGATaGCTCCGTGGAGTGCCTGGGAGGGAAGGAAGGCGTGTGCACCCT | + |
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Preference number: 1 (lower is better) Translates to: ATAWSVTPRIPGDPR*LRGVPGREGRRVHP Trigger: AGGGTGCACACGCCTTCCTTCCCTCCCAGGCACTCCACGGAGTCATCTTGGGTCTCCTGGGATTCTAGGAGTGACAGACCAGGCTGTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR CCA 90 bp | TGGGCCCTTCCTGAACACGCAGGGAATCGCTACTCTGCCAGACCTTaGTTACAGAAGCAGCCCCGGCCACTGCTGGGCACATCCTCCACT | + |
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Preference number: 1 (lower is better) Translates to: WALPEHAGNRYSARP*LQKQPRPLLGTSST Trigger: AGTGGAGGATGTGCCCAGCAGTGGCCGGGGCTGCTTCTGTAACCAAGGTCTGGCAGAGTAGCGATTCCCTGCGTGTTCAGGAAGGGCCCA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR TCA 90 bp | GAATCAGAGTACCCTCCAGCAGGCCAAAGAGAGAGATGTGCAGGCTaGGGCTGGGGAACTTGGCCCAAGGGAGGCAGTCACTCCCCTTGC | + |
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Preference number: 1 (lower is better) Translates to: ESEYPPAGQRERCAG*GWGTWPKGGSHSPC Trigger: GCAAGGGGAGTGACTGCCTCCCTTGGGCCAAGTTCCCCAGCCTCAGCCTGCACATCTCTCTCTTTGGCCTGCTGGAGGGTACTCTGATTC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR GCA 90 bp | GGGCACTCTGAGCCCAGACTCAGAGTGGGGCTCTATCTCCATCACTaGCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCCTTG | + |
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Preference number: 1 (lower is better) Translates to: GHSEPRLRVGLYLHH*LLPSRCLPEATYAL Trigger: CAAGGCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATAGAGCCCCACTCTGAGTCTGGGCTCAGAGTGCCC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR TCA 90 bp | TTGGTTACAGAAGCAGCCCCGGCCACTGCTGGGCACATCCTCCACTaGGTTCCCTCCACTAGGCAAAGGCCATGGTCACAGAGCACTTGG | + |
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Preference number: 1 (lower is better) Translates to: LVTEAAPATAGHILH*VPSTRQRPWSQSTW Trigger: CCAAGTGCTCTGTGACCATGGCCTTTGCCTAGTGGAGGGAACTCAGTGGAGGATGTGCCCAGCAGTGGCCGGGGCTGCTTCTGTAACCAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR GCA 90 bp | AGCCAGAGAATCAGAGTACCCTCCAGCAGGCCAAAGAGAGAGATGTaGAGGCTGAGGCTGGGGAACTTGGCCCAAGGGAGGCAGTCACTC | + |
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Preference number: 1 (lower is better) Translates to: SQRIRVPSSRPKREM*RLRLGNLAQGRQSL Trigger: GAGTGACTGCCTCCCTTGGGCCAAGTTCCCCAGCCTCAGCCTGCACATCTCTCTCTTTGGCCTGCTGGAGGGTACTCTGATTCTCTGGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR CCA 90 bp | CAAGAAACACAGGGCAAGGAGTTGTCCCTGCACAAGGGTGAGGGGTaGGGTGCAGAGGCCACAGCCTGGTCTGTCACTCCTAGAATCCCA | + |
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Preference number: 1 (lower is better) Translates to: QETQGKELSLHKGEG*GAEATAWSVTPRIP Trigger: TGGGATTCTAGGAGTGACAGACCAGGCTGTGGCCTCTGCACCCCACCCCTCACCCTTGTGCAGGGACAACTCCTTGCCCTGTGTTTCTTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR CCA 90 bp | TGTGTGTGCGTGTGTGATGAGGGACTCACACATCGGGTTTCTGGATaGGGAGAAGCTGAGAGCCCCTGCTGGGGCCGACACAACCTCCTA | + |
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Preference number: 1 (lower is better) Translates to: CVCVCDEGLTHRVSG*GEAESPCWGRHNLL Trigger: TAGGAGGTTGTGTCGGCCCCAGCAGGGGCTCTCAGCTTCTCCCCATCCAGAAACCCGATGTGTGAGTCCCTCATCACACACGCACACACA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR TCA 90 bp | GAGCTGGCAGTGGCAGGGTCCATGGTCCGAGTAAAGAGGTGGGACTaGGGGACTGGCACCAAGCCAGTGACAAGAGGCAGGTATACACAA | + |
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Preference number: 1 (lower is better) Translates to: ELAVAGSMVRVKRWD*GTGTKPVTRGRYTQ Trigger: TTGTGTATACCTGCCTCTTGTCACTGGCTTGGTGCCAGTCCCTCAGTCCCACCTCTTTACTCGGACCATGGACCCTGCCACTGCCAGCTC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR GCA 90 bp | CCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATaGCTTGACCCCACCCACCTAAATGTATCACTGCAGTTTAACCAG | + |
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Preference number: 1 (lower is better) Translates to: PSLPPSKQVSPGGHI*LDPTHLNVSLQFNQ Trigger: CTGGTTAAACTGCAGTGATACATTTAGGTGGGTGGGGTCAAGGCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR CCA 90 bp | ACCTCTGAGAATGGTGTCAACAAATGTCACCTGGTCTACGGTAGTTaGGACTGTACTAAGAGCTGGCAGTGGCAGGGTCCATGGTCCGAG | + |
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Preference number: 1 (lower is better) Translates to: TSENGVNKCHLVYGS*DCTKSWQWQGPWSE Trigger: CTCGGACCATGGACCCTGCCACTGCCAGCTCTTAGTACAGTCCCAACTACCGTAGACCAGGTGACATTTGTTGACACCATTCTCAGAGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR TCA 90 bp | CGACACAACCTCCTAGAAAGGGCTTCCTGGCAGAGGAACTCACCTTaGCTCAGCCCAGACCCTAAAACTTACTCTAGACTCTGCCTGTTA | + |
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Preference number: 1 (lower is better) Translates to: RHNLLERASWQRNSP*LSPDPKTYSRLCLL Trigger: TAACAGGCAGAGTCTAGAGTAAGTTTTAGGGTCTGGGCTGAGTCAAGGTGAGTTCCTCTGCCAGGAAGCCCTTTCTAGGAGGTTGTGTCG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR TCA 90 bp | GATGTCCCTGCAGGCTGCGCAGGGCTGGCGTCTTCCATTTCTACGACTACCTCCGTCCCTGCACAAGGGTaGGGGGTGGGGTGCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: DVPAGCAGLASSISTTTSVPAQG*GVGCRG Trigger: GCCTCTGCACCCCACCCCTCACCCTTGTGCAGGGAC...GGAGGTAGTCGTAGAAATGGAAGACGCCAGCCCTGCGCAGCCTGCAGGGACATC 64% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR CCA 90 bp | AGGGACTCTGGTGCTCTGGGACGCAGGCGGCCAGCCAGAGAATCAGAGTACCCTCACAAGGGTGAGGGGTaGGGTGCAGAGGCCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: RDSGALGRRRPARESEYPHKGEG*GAEATA Trigger: GGCTGTGGCCTCTGCACCCCACCCCTCACCCTTGTG...AGGGTACTCTGATTCTCTGGCTGGCCGCCTGCGTCCCAGAGCACCAGAGTCCCT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR GCA 90 bp | GCTTTAACCCGTAGGCCTTGGGGCAGCCTCAGGAGGGGATCTGGAGGAGGCACTAAGGCGTGTGCACCCTaGCTGCCTGCAGGCCTGTCT | + |
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Preference number: 2 (lower is better) Translates to: ALTRRPWGSLRRGSGGGTKACAP*LPAGLS Trigger: AGACAGGCCTGCAGGCAGGCAGGGTGCACACGCCTT...AGTGCCTCCTCCAGATCCCCTCCTGAGGCTGCCCCAAGGCCTACGGGTTAAAGC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR TCA 90 bp | TATCTCCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCCGTCCCTGCACAAGGGTaGGGGGTGGGGTGCAGAGGC | + |
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Preference number: 2 (lower is better) Translates to: YLHHCLLPSRCLPEATYAVPAQG*GVGCRG Trigger: GCCTCTGCACCCCACCCCTCACCCTTGTGCAGGGAC...GGCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR TCA 90 bp | GGGGACCACCCCCTTGCAGAAGGGAGAAGCCTCGGGCCAAATCTCTTAGTGTGCGAGAGATGTGCAGGCTaGGGCTGGGGAACTTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: GDHPLAEGRSLGPNLLVCERCAG*GWGTWP Trigger: GGGCCAAGTTCCCCAGCCTCAGCCTGCACATCTCTC...GCACACTAAGAGATTTGGCCCGAGGCTTCTCCCTTCTGCAAGGGGGTGGTCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR GCA 90 bp | CTCCAGCAGGCCAAAGAGAGAGATGTGCAGGCTGAGGCTGGGGAACTTGGCCCACGTGTGCACCCTGCCTaGCTGCAGGCCTGTCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: LQQAKERDVQAEAGELGPRVHPA*LQACLG Trigger: TCCTAGACAGGCCTGCAGGCAGGCAGGGTGCACACG...TGGGCCAAGTTCCCCAGCCTCAGCCTGCACATCTCTCTCTTTGGCCTGCTGGAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR GCA 90 bp | GGGGACCACCCCCTTGCAGAAGGGAGAAGCCTCGGGCCAAATCTCTTAGTGTGCGAAGCTGAGAGCCCCTaGTGGGGCCGACACAACCTC | + |
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Preference number: 2 (lower is better) Translates to: GDHPLAEGRSLGPNLLVCEAESP*WGRHNL Trigger: GAGGTTGTGTCGGCCCCAGCAGGGGCTCTCAGCTTC...GCACACTAAGAGATTTGGCCCGAGGCTTCTCCCTTCTGCAAGGGGGTGGTCCCC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR CCA 90 bp | GCTTTAACCCGTAGGCCTTGGGGCAGCCTCAGGAGGGGATCTGGAGGAGGCACTACTCCGTGGAGTGCCTaGGAGGGAAGGAAGGCGTGT | + |
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Preference number: 2 (lower is better) Translates to: ALTRRPWGSLRRGSGGGTTPWSA*EGRKAC Trigger: ACACGCCTTCCTTCCCTCCCAGGCACTCCACGGAGT...AGTGCCTCCTCCAGATCCCCTCCTGAGGCTGCCCCAAGGCCTACGGGTTAAAGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR CCA 90 bp | CCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCCTTGACAGGGGCCACACAGGCTaGTGGCACCAGGGGTGTGTC | + |
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Preference number: 2 (lower is better) Translates to: PSLPPSKQVSPGGHICLDRGHTG*WHQGCV Trigger: GACACACCCCTGGTGCCACCAGCCTGTGTGGCCCCT...GTCAAGGCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR TCA 90 bp | CCTCATGCACTAGGAGCCTATGGGCAGCTAGGAGCCAGGGACTATCAGGCCTGTCCAGGAGACCCAAGATaGCTCCGTGGAGTGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: PHALGAYGQLGARDYQACPGDPR*LRGVPG Trigger: CCCAGGCACTCCACGGAGTCATCTTGGGTCTCCTGG...ACAGGCCTGATAGTCCCTGGCTCCTAGCTGCCCATAGGCTCCTAGTGCATGAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR GCA 90 bp | CCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCCTTGACCGTGTGCACCCTGCCTaGCTGCAGGCCTGTCTAGGA | + |
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Preference number: 2 (lower is better) Translates to: PSLPPSKQVSPGGHICLDRVHPA*LQACLG Trigger: TCCTAGACAGGCCTGCAGGCAGGCAGGGTGCACACG...GTCAAGGCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR GCA 90 bp | TATCTCCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCCGATGTCCCTGCAGGCTaGGCAGGGCTGGCGTCTTCC | + |
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Preference number: 2 (lower is better) Translates to: YLHHCLLPSRCLPEATYADVPAG*AGLASS Trigger: GGAAGACGCCAGCCCTGCGCAGCCTGCAGGGACATC...GGCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR CCA 90 bp | GGGCTCTATCTCCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATTAACCCGTAGGCCTTaGGGCAGCCTCAGGAGGGGA | + |
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Preference number: 2 (lower is better) Translates to: GLYLHHCLLPSRCLPEATLTRRP*GSLRRG Trigger: TCCCCTCCTGAGGCTGCCCCAAGGCCTACGGGTTAA...TGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATAGAGCCC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR CAA 90 bp | CTCTGCCTGTTAGAGTCTAGAGGCCAAGAAACACAGGGCAAGGAGTaGTCCCTGCACAAGGGTGAGGGGTGGGGTGCAGAGGCCACAGCC | + |
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Preference number: 2 (lower is better) Translates to: LCLLESRGQETQGKE*SLHKGEGWGAEATA Trigger: GGCTGTGGCCTCTGCACCCCACCCCTCACCCTTGTGCAGGGACAACTCCTTGCCCTGTGTTTCTTGGCCTCTAGACTCTAACAGGCAGAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR TCA 90 bp | GTACTAAGAGCTGGCAGTGGCAGGGTCCATGGTCCGAGTAAAGAGGTGGGACTGCCAGGAGACCCAAGATaGCTCCGTGGAGTGCCTGGG | + |
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Preference number: 2 (lower is better) Translates to: VLRAGSGRVHGPSKEVGLPGDPR*LRGVPG Trigger: CCCAGGCACTCCACGGAGTCATCTTGGGTCTCCTGG...CAGTCCCACCTCTTTACTCGGACCATGGACCCTGCCACTGCCAGCTCTTAGTAC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR TCA 90 bp | CTATCTCCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCGAGAGATGTGCAGGCTaGGGCTGGGGAACTTGGCCC | + |
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Preference number: 2 (lower is better) Translates to: LSPSLPPSKQVSPGGHICERCAG*GWGTWP Trigger: GGGCCAAGTTCCCCAGCCTCAGCCTGCACATCTCTC...GCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR GCA 90 bp | GCTGGGGAACTTGGCCCAAGGGAGGCAGTCACTCCCCTTGCTAGATGTCCTCAAGCAAGGAGTTGTCCCTaGACAAGGGTGAGGGGTGGG | + |
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Preference number: 2 (lower is better) Translates to: AGELGPREAVTPLARCPQARSCP*TRVRGG Trigger: CCCACCCCTCACCCTTGTGCAGGGACAACTCCTTGC...TTGAGGACATCTAGCAAGGGGAGTGACTGCCTCCCTTGGGCCAAGTTCCCCAGC 60% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR GCA 90 bp | AGGGACTCTGGTGCTCTGGGACGCAGGCGGCCAGCCAGAGAATCAGAGTACCCTCCAAAGAGAGAGATGTaGAGGCTGAGGCTGGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: RDSGALGRRRPARESEYPPKREM*RLRLGN Trigger: GTTCCCCAGCCTCAGCCTGCACATCTCTCTCTTTGG...AGGGTACTCTGATTCTCTGGCTGGCCGCCTGCGTCCCAGAGCACCAGAGTCCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR GCA 90 bp | TATCTCCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCCAGGGGACCACCCCCTTaGAGAAGGGAGAAGCCTCGG | + |
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Preference number: 2 (lower is better) Translates to: YLHHCLLPSRCLPEATYARGPPP*RREKPR Trigger: CCGAGGCTTCTCCCTTCTGCAAGGGGGTGGTCCCCT...GGCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR CCA 90 bp | GAAGGGACTCTGGTGCTCTGGGACGCAGGCGGCCAGCCAGAGAATCAGAGTACCGCAGAGGCCACAGCCTaGTCTGTCACTCCTAGAATC | + |
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Preference number: 2 (lower is better) Translates to: EGTLVLWDAGGQPENQSTAEATA*SVTPRI Trigger: GATTCTAGGAGTGACAGACCAGGCTGTGGCCTCTGC...GGTACTCTGATTCTCTGGCTGGCCGCCTGCGTCCCAGAGCACCAGAGTCCCTTC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR CCA 90 bp | CTATCTCCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCGCTGAGAGCCCCTGCTaGGGCCGACACAACCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: LSPSLPPSKQVSPGGHICAESPC*GRHNLL Trigger: TAGGAGGTTGTGTCGGCCCCAGCAGGGGCTCTCAGC...GCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR CAA 90 bp | TCCAGCAGGCCAAAGAGAGAGATGTGCAGGCTGAGGCTGGGGAACTaGGCCCAAGGGAGGCAGTCACTCCCCTTGCTAGATGTCCTCAAC | + |
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Preference number: 2 (lower is better) Translates to: SSRPKREMCRLRLGN*AQGRQSLPLLDVLN Trigger: GTTGAGGACATCTAGCAAGGGGAGTGACTGCCTCCCTTGGGCCAAGTTCCCCAGCCTCAGCCTGCACATCTCTCTCTTTGGCCTGCTGGA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR GCA 90 bp | ATGGTCACAGAGCACTTGGCAGCAGGAACAACCGAGCCCAGGGAGGCTGTGAGCCCAAAGAGAGAGATGTaGAGGCTGAGGCTGGGGAAC | + |
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Preference number: 2 (lower is better) Translates to: MVTEHLAAGTTEPREAVSPKREM*RLRLGN Trigger: GTTCCCCAGCCTCAGCCTGCACATCTCTCTCTTTGG...GCTCACAGCCTCCCTGGGCTCGGTTGTTCCTGCTGCCAAGTGCTCTGTGACCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR GCA 90 bp | AACACGCAGGGAATCGCTACTCTGCCAGACCTTGGTTACAGAAGCAGCCCCGGCAGGCCTTGGAGGCCATaGCGAGGAAATGTCCCCACT | + |
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Preference number: 2 (lower is better) Translates to: NTQGIATLPDLGYRSSPGRPWRP*RGNVPT Trigger: AGTGGGGACATTTCCTCGGCATGGCCTCCAAGGCCT...GCCGGGGCTGCTTCTGTAACCAAGGTCTGGCAGAGTAGCGATTCCCTGCGTGTT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR CCA 90 bp | CAGGGAGGCTGTGAGCCCAGGTGCCCTAGAGAAAGATTCCTCGGGTATAGGGGATGCACTAGGAGCCTATaGGCAGCTAGGAGCCAGGGA | + |
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Preference number: 2 (lower is better) Translates to: QGGCEPRCPRERFLGYRGCTRSL*AARSQG Trigger: TCCCTGGCTCCTAGCTGCCCATAGGCTCCTAGTGCA...TCCCCTATACCCGAGGAATCTTTCTCTAGGGCACCTGGGCTCACAGCCTCCCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR TCA 90 bp | GTACTAAGAGCTGGCAGTGGCAGGGTCCATGGTCCGAGTAAAGAGGTGGGACTGATCTGGAGGAGGCACTaGGCCAGGTGTGTAGCCATG | + |
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Preference number: 2 (lower is better) Translates to: VLRAGSGRVHGPSKEVGLIWRRH*ARCVAM Trigger: CATGGCTACACACCTGGCTCAGTGCCTCCTCCAGAT...CAGTCCCACCTCTTTACTCGGACCATGGACCCTGCCACTGCCAGCTCTTAGTAC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR-3UTR CCA 90 bp | TTCCCTCCACTAGGCAAAGGCCATGGTCACAGAGCACTTGGCAGCAGGAACAACACTCCGTGGAGTGCCTaGGAGGGAAGGAAGGCGTGT | + |
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Preference number: 2 (lower is better) Translates to: FPPLGKGHGHRALGSRNNTPWSA*EGRKAC Trigger: ACACGCCTTCCTTCCCTCCCAGGCACTCCACGGAGT...GTTGTTCCTGCTGCCAAGTGCTCTGTGACCATGGCCTTTGCCTAGTGGAGGGAA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR CAA 90 bp | AGGCTGAGGCTGGGGAACTTGGCCCAAGGGAGGCAGTCACTCCCCTaGCTAGATGTCCTCAACTGGATCTCTAGAAACACCGTGTGTGTG | + |
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Preference number: 2 (lower is better) Translates to: RLRLGNLAQGRQSLP*LDVLNWISRNTVCV Trigger: CACACACACGGTGTTTCTAGAGATCCAGTTGAGGACATCTAGCAAGGGGAGTGACTGCCTCCCTTGGGCCAAGTTCCCCAGCCTCAGCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR CAA 90 bp | GTAGCCATGCAGGCCTTGGAGGCCATGCCGAGGAAATGTCCCCACTaGTCCTCTCCTCAGAATTCCTCATGCACTAGGAGCCTATGGGCA | + |
|
Preference number: 2 (lower is better) Translates to: VAMQALEAMPRKCPH*SSPQNSSCTRSLWA Trigger: TGCCCATAGGCTCCTAGTGCATGAGGAATTCTGAGGAGAGGACAAGTGGGGACATTTCCTCGGCATGGCCTCCAAGGCCTGCATGGCTAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR-3UTR TCA 90 bp | AACACGCAGGGAATCGCTACTCTGCCAGACCTTGGTTACAGAAGCAGCCCCGGCCAGAGGAACTCACCTTaGCTCAGCCCAGACCCTAAA | + |
|
Preference number: 2 (lower is better) Translates to: NTQGIATLPDLGYRSSPGQRNSP*LSPDPK Trigger: TTTAGGGTCTGGGCTGAGTCAAGGTGAGTTCCTCTG...GCCGGGGCTGCTTCTGTAACCAAGGTCTGGCAGAGTAGCGATTCCCTGCGTGTT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR-3UTR TCA 90 bp | CTATCTCCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCCTGGCACCAAGCCAGTaGCAAGAGGCAGGTATACAC | + |
|
Preference number: 2 (lower is better) Translates to: LSPSLPPSKQVSPGGHICLAPSQ*QEAGIH Trigger: GTGTATACCTGCCTCTTGTCACTGGCTTGGTGCCAG...GCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR-3UTR GCA 90 bp | ATGCCGAGGAAATGTCCCCACTTGTCCTCTCCTCAGAATTCCTCATGCACTAGGAAGGCGTGTGCACCCTaGCTGCCTGCAGGCCTGTCT | + |
|
Preference number: 2 (lower is better) Translates to: MPRKCPHLSSPQNSSCTRKACAP*LPAGLS Trigger: AGACAGGCCTGCAGGCAGGCAGGGTGCACACGCCTT...CCTAGTGCATGAGGAATTCTGAGGAGAGGACAAGTGGGGACATTTCCTCGGCAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCCCTCCACTAGGCAAAGGCCATGGTCACAGAGCACTTGGCAGCAGGAACAACAGGCCTTGGAGGCCATaGCGAGGAAATGTCCCCACT | + |
|
Preference number: 2 (lower is better) Translates to: FPPLGKGHGHRALGSRNNRPWRP*RGNVPT Trigger: AGTGGGGACATTTCCTCGGCATGGCCTCCAAGGCCT...GTTGTTCCTGCTGCCAAGTGCTCTGTGACCATGGCCTTTGCCTAGTGGAGGGAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR-3UTR GCA 90 bp | GTACTAAGAGCTGGCAGTGGCAGGGTCCATGGTCCGAGTAAAGAGGTGGGACTGGGCTGTGAGCCCAGGTaGCCTAGAGAAAGATTCCTC | + |
|
Preference number: 2 (lower is better) Translates to: VLRAGSGRVHGPSKEVGLGCEPR*PRERFL Trigger: GAGGAATCTTTCTCTAGGGCACCTGGGCTCACAGCC...CAGTCCCACCTCTTTACTCGGACCATGGACCCTGCCACTGCCAGCTCTTAGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR-3UTR GCA 90 bp | CCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCCTTGACCCAAATCTCTTAGTGTaGTTGCTGCTGAAGGGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: PSLPPSKQVSPGGHICLDPNLLV*LLLKGR Trigger: CCTACCCTTCAGCAGCAAGCACACTAAGAGATTTGG...GTCAAGGCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR-3UTR GCA 90 bp | CAGGGAGGCTGTGAGCCCAGGTGCCCTAGAGAAAGATTCCTCGGGTATAGGGGACCAAATCTCTTAGTGTaGTTGCTGCTGAAGGGTAGG | + |
|
Preference number: 2 (lower is better) Translates to: QGGCEPRCPRERFLGYRGPNLLV*LLLKGR Trigger: CCTACCCTTCAGCAGCAAGCACACTAAGAGATTTGG...TCCCCTATACCCGAGGAATCTTTCTCTAGGGCACCTGGGCTCACAGCCTCCCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR-3UTR CCA 90 bp | ATGCCGAGGAAATGTCCCCACTTGTCCTCTCCTCAGAATTCCTCATGCACTAGGGCAGAGGCCACAGCCTaGTCTGTCACTCCTAGAATC | + |
|
Preference number: 2 (lower is better) Translates to: MPRKCPHLSSPQNSSCTRAEATA*SVTPRI Trigger: GATTCTAGGAGTGACAGACCAGGCTGTGGCCTCTGC...CCTAGTGCATGAGGAATTCTGAGGAGAGGACAAGTGGGGACATTTCCTCGGCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCTACGACTACCTCCCTTGGGACTGTATCTGTATTTGTGGAGGATTCAAGATGAGGGGCCACACAGGCTaGTGGCACCAGGGGTGTGTC | + |
|
Preference number: 2 (lower is better) Translates to: FYDYLPWDCICICGGFKMRGHTG*WHQGCV Trigger: GACACACCCCTGGTGCCACCAGCCTGTGTGGCCCCT...CATCTTGAATCCTCCACAAATACAGATACAGTCCCAAGGGAGGTAGTCGTAGAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR-3UTR CCA 90 bp | CCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCCTTGACTCAACAAATGTCACCTaGTCTACGGTAGTTGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: PSLPPSKQVSPGGHICLDSTNVT*STVVGT Trigger: AGTCCCAACTACCGTAGACCAGGTGACATTTGTTGA...GTCAAGGCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR-3UTR GCA 90 bp | TTCTACGACTACCTCCCTTGGGACTGTATCTGTATTTGTGGAGGATTCAAGATGGAAGCTGAGAGCCCCTaGTGGGGCCGACACAACCTC | + |
|
Preference number: 2 (lower is better) Translates to: FYDYLPWDCICICGGFKMEAESP*WGRHNL Trigger: GAGGTTGTGTCGGCCCCAGCAGGGGCTCTCAGCTTC...CATCTTGAATCCTCCACAAATACAGATACAGTCCCAAGGGAGGTAGTCGTAGAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR CAA 90 bp | CAGGCTGCGCAGGGCTGGCGTCTTCCATTTCTACGACTACCTCCCTaGGGACTGTATCTGTATTTGTGGAGGATTCAAGATGATAAATCT | + |
|
Preference number: 2 (lower is better) Translates to: QAAQGWRLPFLRLPP*GLYLYLWRIQDDKS Trigger: AGATTTATCATCTTGAATCCTCCACAAATACAGATACAGTCCCAAGGGAGGTAGTCGTAGAAATGGAAGACGCCAGCCCTGCGCAGCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR-3UTR CCA 90 bp | TTGGGACTGTATCTGTATTTGTGGAGGATTCAAGATGATAAATCTTCAACACCTGCTGAGAGCCCCTGCTaGGGCCGACACAACCTCCTA | + |
|
Preference number: 2 (lower is better) Translates to: LGLYLYLWRIQDDKSSTPAESPC*GRHNLL Trigger: TAGGAGGTTGTGTCGGCCCCAGCAGGGGCTCTCAGC...AGGTGTTGAAGATTTATCATCTTGAATCCTCCACAAATACAGATACAGTCCCAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR-3UTR TCA 90 bp | CTGTATCTGTATTTGTGGAGGATTCAAGATGATAAATCTTCAACACCTCTGAGAATCTGGAGGAGGCACTaGGCCAGGTGTGTAGCCATG | + |
|
Preference number: 2 (lower is better) Translates to: LYLYLWRIQDDKSSTPLRIWRRH*ARCVAM Trigger: CATGGCTACACACCTGGCTCAGTGCCTCCTCCAGAT...TCTCAGAGGTGTTGAAGATTTATCATCTTGAATCCTCCACAAATACAGATACAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR-3UTR CCA 90 bp | TTCTACGACTACCTCCCTTGGGACTGTATCTGTATTTGTGGAGGATTCAAGATGTCAACAAATGTCACCTaGTCTACGGTAGTTGGGACT | + |
|
Preference number: 2 (lower is better) Translates to: FYDYLPWDCICICGGFKMSTNVT*STVVGT Trigger: AGTCCCAACTACCGTAGACCAGGTGACATTTGTTGA...CATCTTGAATCCTCCACAAATACAGATACAGTCCCAAGGGAGGTAGTCGTAGAA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR TCA 72 bp | TGCCTGCCTGCAGGCCTGTCTAGGACCCATGGACAGTaGAGTCCCCAGCTGCTCGGGCCCAGGTCCAGGCCC | + |
|
Preference number: 3 (lower is better) Translates to: CLPAGLSRTHGQ*SPQLLGPRSRP Trigger: GGGCCTGGACCTGGGCCCGAGCAGCTGGGGACTTCACTGTCCATGGGTCCTAGACAGGCCTGCAGGCAGGCA 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR GCA 72 bp | GCCTGTCTAGGACCCATGGACAGTGAAGTCCCCAGCTaGTCGGGCCCAGGTCCAGGCCCAGGCAGGTCCCAG | + |
|
Preference number: 3 (lower is better) Translates to: ACLGPMDSEVPS*SGPGPGPGRSQ Trigger: CTGGGACCTGCCTGGGCCTGGACCTGGGCCCGAGCAGCTGGGGACTTCACTGTCCATGGGTCCTAGACAGGC 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR GCA 72 bp | GTGCCTGGGAGGGAAGGAAGGCGTGTGCACCCTGCCTaGCTGCAGGCCTGTCTAGGACCCATGGACAGTGAA | + |
|
Preference number: 3 (lower is better) Translates to: VPGREGRRVHPA*LQACLGPMDSE Trigger: TTCACTGTCCATGGGTCCTAGACAGGCCTGCAGGCAGGCAGGGTGCACACGCCTTCCTTCCCTCCCAGGCAC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR CCA 72 bp | AATCCCAGGAGACCCAAGATGACTCCGTGGAGTGCCTaGGAGGGAAGGAAGGCGTGTGCACCCTGCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: NPRRPKMTPWSA*EGRKACAPCLP Trigger: AGGCAGGCAGGGTGCACACGCCTTCCTTCCCTCCCAGGCACTCCACGGAGTCATCTTGGGTCTCCTGGGATT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR CCA 72 bp | CGGGTTTCTGGATGGGGAGAAGCTGAGAGCCCCTGCTaGGGCCGACACAACCTCCTAGAAAGGGCTTCCTGG | + |
|
Preference number: 3 (lower is better) Translates to: RVSGWGEAESPC*GRHNLLERASW Trigger: CCAGGAAGCCCTTTCTAGGAGGTTGTGTCGGCCCCAGCAGGGGCTCTCAGCTTCTCCCCATCCAGAAACCCG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR TCA 72 bp | TACCCTCCAGCAGGCCAAAGAGAGAGATGTGCAGGCTaGGGCTGGGGAACTTGGCCCAAGGGAGGCAGTCAC | + |
|
Preference number: 3 (lower is better) Translates to: YPPAGQRERCAG*GWGTWPKGGSH Trigger: GTGACTGCCTCCCTTGGGCCAAGTTCCCCAGCCTCAGCCTGCACATCTCTCTCTTTGGCCTGCTGGAGGGTA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR GCA 72 bp | CTAGAATCCCAGGAGACCCAAGATGACTCCGTGGAGTaGCTGGGAGGGAAGGAAGGCGTGTGCACCCTGCCT | + |
|
Preference number: 3 (lower is better) Translates to: LESQETQDDSVE*LGGKEGVCTLP Trigger: AGGCAGGGTGCACACGCCTTCCTTCCCTCCCAGGCACTCCACGGAGTCATCTTGGGTCTCCTGGGATTCTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR GCA 72 bp | GAGCCCAGACTCAGAGTGGGGCTCTATCTCCATCACTaGCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACA | + |
|
Preference number: 3 (lower is better) Translates to: EPRLRVGLYLHH*LLPSRCLPEAT Trigger: TGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATAGAGCCCCACTCTGAGTCTGGGCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR CCA 72 bp | GTGTGTGATGAGGGACTCACACATCGGGTTTCTGGATaGGGAGAAGCTGAGAGCCCCTGCTGGGGCCGACAC | + |
|
Preference number: 3 (lower is better) Translates to: VCDEGLTHRVSG*GEAESPCWGRH Trigger: GTGTCGGCCCCAGCAGGGGCTCTCAGCTTCTCCCCATCCAGAAACCCGATGTGTGAGTCCCTCATCACACAC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR CCA 72 bp | CCTGAACACGCAGGGAATCGCTACTCTGCCAGACCTTaGTTACAGAAGCAGCCCCGGCCACTGCTGGGCACA | + |
|
Preference number: 3 (lower is better) Translates to: PEHAGNRYSARP*LQKQPRPLLGT Trigger: TGTGCCCAGCAGTGGCCGGGGCTGCTTCTGTAACCAAGGTCTGGCAGAGTAGCGATTCCCTGCGTGTTCAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR GCA 72 bp | ATCAGAGTACCCTCCAGCAGGCCAAAGAGAGAGATGTaGAGGCTGAGGCTGGGGAACTTGGCCCAAGGGAGG | + |
|
Preference number: 3 (lower is better) Translates to: IRVPSSRPKREM*RLRLGNLAQGR Trigger: CCTCCCTTGGGCCAAGTTCCCCAGCCTCAGCCTGCACATCTCTCTCTTTGGCCTGCTGGAGGGTACTCTGAT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR-3UTR CAA 90 bp | GATGTCCCTGCAGGCTGCGCAGGGCTGGCGTCTTCCATTTCTACGACTACCTCCATGGTCACAGAGCACTaGGCAGCAGGAACAACCGAG | + |
|
Preference number: 3 (lower is better) Translates to: DVPAGCAGLASSISTTTSMVTEH*AAGTTE Trigger: CTCGGTTGTTCCTGCTGCCAAGTGCTCTGTGACCAT...GGAGGTAGTCGTAGAAATGGAAGACGCCAGCCCTGCGCAGCCTGCAGGGACATC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR GCA 72 bp | GCAGAAGGGAGAAGCCTCGGGCCAAATCTCTTAGTGTaGTTGCTGCTGAAGGGTAGGGAGGTGCTGGGAGCT | + |
|
Preference number: 3 (lower is better) Translates to: AEGRSLGPNLLV*LLLKGREVLGA Trigger: AGCTCCCAGCACCTCCCTACCCTTCAGCAGCAAGCACACTAAGAGATTTGGCCCGAGGCTTCTCCCTTCTGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR CCA 72 bp | TCCTCTCCTCAGAATTCCTCATGCACTAGGAGCCTATaGGCAGCTAGGAGCCAGGGACTATCAGGCCTGTGG | + |
|
Preference number: 3 (lower is better) Translates to: SSPQNSSCTRSL*AARSQGLSGLW Trigger: CCACAGGCCTGATAGTCCCTGGCTCCTAGCTGCCCATAGGCTCCTAGTGCATGAGGAATTCTGAGGAGAGGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR CCA 72 bp | GTCCATGGTCCGAGTAAAGAGGTGGGACTGAGGGACTaGCACCAAGCCAGTGACAAGAGGCAGGTATACACA | + |
|
Preference number: 3 (lower is better) Translates to: VHGPSKEVGLRD*HQASDKRQVYT Trigger: TGTGTATACCTGCCTCTTGTCACTGGCTTGGTGCCAGTCCCTCAGTCCCACCTCTTTACTCGGACCATGGAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR GCA 72 bp | AAATGTCCCCACTTGTCCTCTCCTCAGAATTCCTCATaGACTAGGAGCCTATGGGCAGCTAGGAGCCAGGGA | + |
|
Preference number: 3 (lower is better) Translates to: KCPHLSSPQNSS*TRSLWAARSQG Trigger: TCCCTGGCTCCTAGCTGCCCATAGGCTCCTAGTGCATGAGGAATTCTGAGGAGAGGACAAGTGGGGACATTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR CCA 72 bp | GGGAGGCAGTCACTCCCCTTGCTAGATGTCCTCAACTaGATCTCTAGAAACACCGTGTGTGTGTGTGTGTGT | + |
|
Preference number: 3 (lower is better) Translates to: GRQSLPLLDVLN*ISRNTVCVCVC Trigger: ACACACACACACACACACGGTGTTTCTAGAGATCCAGTTGAGGACATCTAGCAAGGGGAGTGACTGCCTCCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR CCA 72 bp | AATGGTGTCAACAAATGTCACCTGGTCTACGGTAGTTaGGACTGTACTAAGAGCTGGCAGTGGCAGGGTCCA | + |
|
Preference number: 3 (lower is better) Translates to: NGVNKCHLVYGS*DCTKSWQWQGP Trigger: TGGACCCTGCCACTGCCAGCTCTTAGTACAGTCCCAACTACCGTAGACCAGGTGACATTTGTTGACACCATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR CCA 72 bp | AGGGCTGGCGTCTTCCATTTCTACGACTACCTCCCTTaGGACTGTATCTGTATTTGTGGAGGATTCAAGATG | + |
|
Preference number: 3 (lower is better) Translates to: RAGVFHFYDYLP*DCICICGGFKM Trigger: CATCTTGAATCCTCCACAAATACAGATACAGTCCCAAGGGAGGTAGTCGTAGAAATGGAAGACGCCAGCCCT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR CCA 72 bp | CTACGACTACCTCCCTTGGGACTGTATCTGTATTTGTaGAGGATTCAAGATGATAAATCTTCAACACCTCTG | + |
|
Preference number: 3 (lower is better) Translates to: LRLPPLGLYLYL*RIQDDKSSTPL Trigger: CAGAGGTGTTGAAGATTTATCATCTTGAATCCTCCACAAATACAGATACAGTCCCAAGGGAGGTAGTCGTAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGGACTCTGGTGCTCTGGGACGCAGGCGGCCAGCCAGAGAATCAGAGTACCGAAACTGCCAGACCCTaGGCCCCAGAGGCTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: EGTLVLWDAGGQPENQSTETARP*APEAPA Trigger: TGCGGGAGCCTCTGGGGCTCAGGGTCTGGCAGTTTC...GGTACTCTGATTCTCTGGCTGGCCGCCTGCGTCCCAGAGCACCAGAGTCCCTTC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| CDS-3UTR TCA 90 bp | GAAGGGACTCTGGTGCTCTGGGACGCAGGCGGCCAGCCAGAGAATCAGAGTACCGGCTGTGCTTCTTCATaGGCGGAGGGGGCTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: EGTLVLWDAGGQPENQSTGCASS*AEGAVC Trigger: GCAAACAGCCCCCTCCGCTCATGAAGAAGCACAGCC...GGTACTCTGATTCTCTGGCTGGCCGCCTGCGTCCCAGAGCACCAGAGTCCCTTC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| CDS-3UTR TCA 90 bp | CTATCTCCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCCGGTCCCCAGGGACATaGGGCCCGTCTCAGCAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: LSPSLPPSKQVSPGGHICRSPGT*GPSQQA Trigger: CGCTTGCTGAGACGGGCCTCATGTCCCTGGGGACCG...GCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATAG 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| CDS-3UTR TCA 90 bp | CTATCTCCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCGAAACTGCCAGACCCTaGGCCCCAGAGGCTCCCGCA | + |
|
Preference number: 4 (lower is better) Translates to: LSPSLPPSKQVSPGGHICETARP*APEAPA Trigger: TGCGGGAGCCTCTGGGGCTCAGGGTCTGGCAGTTTC...GCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| CDS-3UTR TCA 90 bp | ACTGTACTAAGAGCTGGCAGTGGCAGGGTCCATGGTCCGAGTAAAGAGGTGGGACGGTCCCCAGGGACATaGGGCCCGTCTCAGCAAGCG | + |
|
Preference number: 4 (lower is better) Translates to: TVLRAGSGRVHGPSKEVGRSPGT*GPSQQA Trigger: CGCTTGCTGAGACGGGCCTCATGTCCCTGGGGACCG...TCCCACCTCTTTACTCGGACCATGGACCCTGCCACTGCCAGCTCTTAGTACAGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| CDS-3UTR TCA 90 bp | AACACGCAGGGAATCGCTACTCTGCCAGACCTTGGTTACAGAAGCAGCCCCGGCGGCTGTGCTTCTTCATaGGCGGAGGGGGCTGTTTGC | + |
|
Preference number: 4 (lower is better) Translates to: NTQGIATLPDLGYRSSPGGCASS*AEGAVC Trigger: GCAAACAGCCCCCTCCGCTCATGAAGAAGCACAGCC...GCCGGGGCTGCTTCTGTAACCAAGGTCTGGCAGAGTAGCGATTCCCTGCGTGTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| CDS-3UTR CCA 90 bp | GGGCTCTATCTCCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATCGTTGCCCAAAACCTaGCTGATCTTGGACCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: GLYLHHCLLPSRCLPEATSLPKT*LILDRC Trigger: GCACCGGTCCAAGATCAGCCAGGTTTTGGGCAACGA...TGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATAGAGCCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| CDS-3UTR GCA 90 bp | AGGGACTCTGGTGCTCTGGGACGCAGGCGGCCAGCCAGAGAATCAGAGTACCCTCTCGGCTGTGTAGAGTaGGTTCCACATGATCAAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RDSGALGRRRPARESEYPLGCVE*VPHDQG Trigger: TCCTTGATCATGTGGAACGCACTCTACACAGCCGAG...AGGGTACTCTGATTCTCTGGCTGGCCGCCTGCGTCCCAGAGCACCAGAGTCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| CDS-3UTR CCA 90 bp | GATGAGGGACTCACACATCGGGTTTCTGGATGGGGAGAAGCTGAGAGCCCCTGCTCGTTGCCCAAAACCTaGCTGATCTTGGACCGGTGC | + |
|
Preference number: 4 (lower is better) Translates to: DEGLTHRVSGWGEAESPCSLPKT*LILDRC Trigger: GCACCGGTCCAAGATCAGCCAGGTTTTGGGCAACGA...GCAGGGGCTCTCAGCTTCTCCCCATCCAGAAACCCGATGTGTGAGTCCCTCATC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
||
| 3UTR CAA 72 bp | CAGCTAGGAGCCAGGGACTATCAGGCCTGTGGTACATaGCCTAACCCTAGCCTGTCGGGAAGGGACTCTGGT | + |
|
Preference number: 4 (lower is better) Translates to: QLGARDYQACGT*PNPSLSGRDSG Trigger: ACCAGAGTCCCTTCCCGACAGGCTAGGGTTAGGCAATGTACCACAGGCCTGATAGTCCCTGGCTCCTAGCTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| CDS-3UTR TCA 90 bp | GGGGACCACCCCCTTGCAGAAGGGAGAAGCCTCGGGCCAAATCTCTTAGTGTGCTGGGGGTCTTGCTTGTaGCTTCAGCCCCATCAAAAA | + |
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Preference number: 4 (lower is better) Translates to: GDHPLAEGRSLGPNLLVCWGSCL*LQPHQK Trigger: TTTTTGATGGGGCTGAAGTCACAAGCAAGACCCCCA...GCACACTAAGAGATTTGGCCCGAGGCTTCTCCCTTCTGCAAGGGGGTGGTCCCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| CDS-3UTR GCA 90 bp | GTACTAAGAGCTGGCAGTGGCAGGGTCCATGGTCCGAGTAAAGAGGTGGGACTGAGATCCGTCTGGCTGTaGTTCTTCATGAGCGGAGGG | + |
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Preference number: 4 (lower is better) Translates to: VLRAGSGRVHGPSKEVGLRSVWL*FFMSGG Trigger: CCCTCCGCTCATGAAGAAGCACAGCCAGACGGATCT...CAGTCCCACCTCTTTACTCGGACCATGGACCCTGCCACTGCCAGCTCTTAGTAC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| CDS-3UTR GCA 90 bp | CCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCCTTGACATAGCAGAAAGAAACTaGCAGACCCTGAGCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: PSLPPSKQVSPGGHICLDIAERN*QTLSPR Trigger: TCTGGGGCTCAGGGTCTGGCAGTTTCTTTCTGCTAT...GTCAAGGCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| CDS-3UTR GCA 90 bp | GGGGACCACCCCCTTGCAGAAGGGAGAAGCCTCGGGCCAAATCTCTTAGTGTGCAGCCCCATCAAAAACTaGATCGTAGAGCTGATCAGG | + |
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Preference number: 4 (lower is better) Translates to: GDHPLAEGRSLGPNLLVCSPIKN*IVELIR Trigger: CCTGATCAGCTCTACGATGCAGTTTTTGATGGGGCT...GCACACTAAGAGATTTGGCCCGAGGCTTCTCCCTTCTGCAAGGGGGTGGTCCCC 56% GC, longest homopolymer 5 nt, total homopolymer stretches 18 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| CDS-3UTR CCA 90 bp | AACACGCAGGGAATCGCTACTCTGCCAGACCTTGGTTACAGAAGCAGCCCCGGCCTCACAAGATCCGTCTaGCTGTGCTTCTTCATGAGC | + |
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Preference number: 4 (lower is better) Translates to: NTQGIATLPDLGYRSSPGLTRSV*LCFFMS Trigger: GCTCATGAAGAAGCACAGCCAGACGGATCTTGTGAG...GCCGGGGCTGCTTCTGTAACCAAGGTCTGGCAGAGTAGCGATTCCCTGCGTGTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR CAA 72 bp | CTGGGGAACTTGGCCCAAGGGAGGCAGTCACTCCCCTaGCTAGATGTCCTCAACTGGATCTCTAGAAACACC | + |
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Preference number: 4 (lower is better) Translates to: LGNLAQGRQSLP*LDVLNWISRNT Trigger: GGTGTTTCTAGAGATCCAGTTGAGGACATCTAGCAAGGGGAGTGACTGCCTCCCTTGGGCCAAGTTCCCCAG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| CDS-3UTR GCA 90 bp | GTACTAAGAGCTGGCAGTGGCAGGGTCCATGGTCCGAGTAAAGAGGTGGGACTGATAGCAGAAAGAAACTaGCAGACCCTGAGCCCCAGA | + |
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Preference number: 4 (lower is better) Translates to: VLRAGSGRVHGPSKEVGLIAERN*QTLSPR Trigger: TCTGGGGCTCAGGGTCTGGCAGTTTCTTTCTGCTAT...CAGTCCCACCTCTTTACTCGGACCATGGACCCTGCCACTGCCAGCTCTTAGTAC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| CDS-3UTR GCA 90 bp | CTATCTCCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCCTCGGCTGTGTAGAGTaGGTTCCACATGATCAAGGA | + |
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Preference number: 4 (lower is better) Translates to: LSPSLPPSKQVSPGGHICLGCVE*VPHDQG Trigger: TCCTTGATCATGTGGAACGCACTCTACACAGCCGAG...GCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| CDS-3UTR GCA 90 bp | TATCTCCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCCAGCCCCATCAAAAACTaGATCGTAGAGCTGATCAGG | + |
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Preference number: 4 (lower is better) Translates to: YLHHCLLPSRCLPEATYASPIKN*IVELIR Trigger: CCTGATCAGCTCTACGATGCAGTTTTTGATGGGGCT...GGCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| CDS-3UTR CCA 90 bp | TTCCCTCCACTAGGCAAAGGCCATGGTCACAGAGCACTTGGCAGCAGGAACAACCTCACAAGATCCGTCTaGCTGTGCTTCTTCATGAGC | + |
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Preference number: 4 (lower is better) Translates to: FPPLGKGHGHRALGSRNNLTRSV*LCFFMS Trigger: GCTCATGAAGAAGCACAGCCAGACGGATCTTGTGAG...GTTGTTCCTGCTGCCAAGTGCTCTGTGACCATGGCCTTTGCCTAGTGGAGGGAA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR CAA 72 bp | CAGGGCTGGCGTCTTCCATTTCTACGACTACCTCCCTaGGGACTGTATCTGTATTTGTGGAGGATTCAAGAT | + |
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Preference number: 4 (lower is better) Translates to: QGWRLPFLRLPP*GLYLYLWRIQD Trigger: ATCTTGAATCCTCCACAAATACAGATACAGTCCCAAGGGAGGTAGTCGTAGAAATGGAAGACGCCAGCCCTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| 3UTR CAA 72 bp | TTTCTACGACTACCTCCCTTGGGACTGTATCTGTATTaGTGGAGGATTCAAGATGATAAATCTTCAACACCT | + |
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Preference number: 4 (lower is better) Translates to: FLRLPPLGLYLY*WRIQDDKSSTP Trigger: AGGTGTTGAAGATTTATCATCTTGAATCCTCCACAAATACAGATACAGTCCCAAGGGAGGTAGTCGTAGAAA 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| CDS TCA 90 bp | GAGGCTCCCGCACAGCAAACTTTATCTCGTTGCCCAAAACCTGGCTaGTCTTGGACCGGTGCACTTCGCCGTCATCATCCTCCCCGCCCA | + |
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Preference number: 5 (lower is better) Translates to: EAPAQQTLSRCPKPG*SWTGALRRHHPPRP Trigger: TGGGCGGGGAGGATGATGACGGCGAAGTGCACCGGTCCAAGATCAGCCAGGTTTTGGGCAACGAGATAAAGTTTGCTGTGCGGGAGCCTC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 ENSMUST00000150462.8 |
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| CDS CCA 90 bp | CCCAGAGGCTCCCGCACAGCAAACTTTATCTCGTTGCCCAAAACCTaGCTGATCTTGGACCGGTGCACTTCGCCGTCATCATCCTCCCCG | + |
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Preference number: 5 (lower is better) Translates to: PRGSRTANFISLPKT*LILDRCTSPSSSSP Trigger: CGGGGAGGATGATGACGGCGAAGTGCACCGGTCCAAGATCAGCCAGGTTTTGGGCAACGAGATAAAGTTTGCTGTGCGGGAGCCTCTGGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 ENSMUST00000150462.8 |
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| CDS CCA 90 bp | GCACTTCGCCGTCATCATCCTCCCCGCCCACACCCAGGATCTTTCTaGTCTTCAAGCGGCTCACAAGATCCGTCTGGCTGTGCTTCTTCA | + |
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Preference number: 5 (lower is better) Translates to: ALRRHHPPRPHPGSF*SSSGSQDPSGCASS Trigger: TGAAGAAGCACAGCCAGACGGATCTTGTGAGCCGCTTGAAGACCAGAAAGATCCTGGGTGTGGGCGGGGAGGATGATGACGGCGAAGTGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 ENSMUST00000150462.8 |
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| CDS-3UTR CAA 90 bp | GCTTTAACCCGTAGGCCTTGGGGCAGCCTCAGGAGGGGATCTGGAGGAGGCACTGGGTTTCCGGCCGACTaGGTAATAGTAGTAGATGCT | + |
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Preference number: 5 (lower is better) Translates to: ALTRRPWGSLRRGSGGGTGFPAD*VIVVDA Trigger: AGCATCTACTACTATTACCAAGTCGGCCGGAAACCC...AGTGCCTCCTCCAGATCCCCTCCTGAGGCTGCCCCAAGGCCTACGGGTTAAAGC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| CDS GCA 90 bp | AGGGCCATGATGGCCACACTGGAGAACAGCATAGCAGAAAGAAACTaGCAGACCCTGAGCCCCAGAGGCTCCCGCACAGCAAACTTTATC | + |
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Preference number: 5 (lower is better) Translates to: RAMMATLENSIAERN*QTLSPRGSRTANFI Trigger: GATAAAGTTTGCTGTGCGGGAGCCTCTGGGGCTCAGGGTCTGGCAGTTTCTTTCTGCTATGCTGTTCTCCAGTGTGGCCATCATGGCCCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 ENSMUST00000150462.8 |
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| CDS GCA 90 bp | AGTGAGCAGAGTCCAGCGGATGATGACCTTCTCGGCTGTGTAGAGTaGGTTCCACATGATCAAGGAGATGCTAAGGAGGGCACCACCGTA | + |
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Preference number: 5 (lower is better) Translates to: SEQSPADDDLLGCVE*VPHDQGDAKEGTTV Trigger: TACGGTGGTGCCCTCCTTAGCATCTCCTTGATCATGTGGAACGCACTCTACACAGCCGAGAAGGTCATCATCCGCTGGACTCTGCTCACT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| CDS-3UTR CAA 90 bp | TATCTCCATCACTGCCTCCTTCCAAGCAGGTGTCTCCCGGAGGCCACATATGCCGGGTTTCCGGCCGACTaGGTAATAGTAGTAGATGCT | + |
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Preference number: 5 (lower is better) Translates to: YLHHCLLPSRCLPEATYAGFPAD*VIVVDA Trigger: AGCATCTACTACTATTACCAAGTCGGCCGGAAACCC...GGCATATGTGGCCTCCGGGAGACACCTGCTTGGAAGGAGGCAGTGATGGAGATA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 |
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| CDS GCA 72 bp | ATCTCGTTGCCCAAAACCTGGCTGATCTTGGACCGGTaGACTTCGCCGTCATCATCCTCCCCGCCCACACCC | + |
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Preference number: 6 (lower is better) Translates to: ISLPKTWLILDR*TSPSSSSPPTP Trigger: GGGTGTGGGCGGGGAGGATGATGACGGCGAAGTGCACCGGTCCAAGATCAGCCAGGTTTTGGGCAACGAGAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 ENSMUST00000150462.8 |
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| CDS CAA 90 bp | CAGACCCTGAGCCCCAGAGGCTCCCGCACAGCAAACTTTATCTCGTaGCCCAAAACCTGGCTGATCTTGGACCGGTGCACTTCGCCGTCA | + |
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Preference number: 6 (lower is better) Translates to: QTLSPRGSRTANFIS*PKTWLILDRCTSPS Trigger: TGACGGCGAAGTGCACCGGTCCAAGATCAGCCAGGTTTTGGGCAACGAGATAAAGTTTGCTGTGCGGGAGCCTCTGGGGCTCAGGGTCTG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 ENSMUST00000150462.8 |
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| CDS GCA 72 bp | ATGGCCACACTGGAGAACAGCATAGCAGAAAGAAACTaGCAGACCCTGAGCCCCAGAGGCTCCCGCACAGCA | + |
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Preference number: 6 (lower is better) Translates to: MATLENSIAERN*QTLSPRGSRTA Trigger: TGCTGTGCGGGAGCCTCTGGGGCTCAGGGTCTGGCAGTTTCTTTCTGCTATGCTGTTCTCCAGTGTGGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 ENSMUST00000150462.8 |
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| CDS CCA 72 bp | CGTCATCATCCTCCCCGCCCACACCCAGGATCTTTCTaGTCTTCAAGCGGCTCACAAGATCCGTCTGGCTGT | + |
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Preference number: 6 (lower is better) Translates to: RHHPPRPHPGSF*SSSGSQDPSGC Trigger: ACAGCCAGACGGATCTTGTGAGCCGCTTGAAGACCAGAAAGATCCTGGGTGTGGGCGGGGAGGATGATGACG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 ENSMUST00000150462.8 |
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| CDS CCA 72 bp | ATCTTTCTGGTCTTCAAGCGGCTCACAAGATCCGTCTaGCTGTGCTTCTTCATGAGCGGAGGGGGCTGTTTG | + |
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Preference number: 6 (lower is better) Translates to: IFLVFKRLTRSV*LCFFMSGGGCL Trigger: CAAACAGCCCCCTCCGCTCATGAAGAAGCACAGCCAGACGGATCTTGTGAGCCGCTTGAAGACCAGAAAGAT 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 ENSMUST00000150462.8 |
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| CDS CCA 72 bp | TCCCGCACAGCAAACTTTATCTCGTTGCCCAAAACCTaGCTGATCTTGGACCGGTGCACTTCGCCGTCATCA | + |
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Preference number: 6 (lower is better) Translates to: SRTANFISLPKT*LILDRCTSPSS Trigger: TGATGACGGCGAAGTGCACCGGTCCAAGATCAGCCAGGTTTTGGGCAACGAGATAAAGTTTGCTGTGCGGGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 ENSMUST00000150462.8 |
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| CDS TCA 72 bp | GCACAGCAAACTTTATCTCGTTGCCCAAAACCTGGCTaGTCTTGGACCGGTGCACTTCGCCGTCATCATCCT | + |
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Preference number: 6 (lower is better) Translates to: AQQTLSRCPKPG*SWTGALRRHHP Trigger: AGGATGATGACGGCGAAGTGCACCGGTCCAAGATCAGCCAGGTTTTGGGCAACGAGATAAAGTTTGCTGTGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000090554.11 ENSMUST00000111266.8 ENSMUST00000150462.8 |
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