Pregenerated sensors for TRP53 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000059552Ensembl transcript IDs: ENSMUST00000005371.12, ENSMUST00000108657.4, ENSMUST00000108658.10, ENSMUST00000171247.8
Found 114 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | TTTGCAGAATGGAAGGAAAGTAGGCCCTGGAGGATATGGACCCTATaGGGGCCCAAGATAGAATCTTACAGGGTGTGGGGTAGGGTGAGA | + |
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Preference number: 1 (lower is better) Translates to: FAEWKESRPWRIWTL*GPKIESYRVWGRVR Trigger: TCTCACCCTACCCCACACCCTGTAAGATTCTATCTTGGGCCCTCATAGGGTCCATATCCTCCAGGGCCTACTTTCCTTCCATTCTGCAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR GCA 90 bp | ATAGAATCTTACAGGGTGTGGGGTAGGGTGAGATTTCATTGTAGGTaGCAGGGTCCAACAACTGGCTGGATAGAATTTCGCTGGGCCAGC | + |
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Preference number: 1 (lower is better) Translates to: IESYRVWGRVRFHCR*QGPTTGWIEFRWAS Trigger: GCTGGCCCAGCGAAATTCTATCCAGCCAGTTGTTGGACCCTGGCACCTACAATGAAATCTCACCCTACCCCACACCCTGTAAGATTCTAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR CCA 90 bp | CATTGTAGGTGCCAGGGTCCAACAACTGGCTGGATAGAATTTCGCTaGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTG | + |
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Preference number: 1 (lower is better) Translates to: HCRCQGPTTGWIEFR*ASRDLTTINLFPNL Trigger: CAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTTGTTGGACCCTGGCACCTACAATG 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR CCA 90 bp | GGTAGGGTGAGATTTCATTGTAGGTGCCAGGGTCCAACAACTGGCTaGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAAC | + |
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Preference number: 1 (lower is better) Translates to: GRVRFHCRCQGPTTG*IEFRWASRDLTTIN Trigger: GTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTTGTTGGACCCTGGCACCTACAATGAAATCTCACCCTACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR-3UTR TCA 90 bp | CGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCCAGGGGTGTGGGGTAGGGTaGGATTTCATTGTAGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: RWASRDLTTINLFPNLGQGCGVG*DFIVGA Trigger: GGCACCTACAATGAAATCTCACCCTACCCCACACCC...CTGGCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR-3UTR GCA 90 bp | CAGACAGGCTTTGCAGAATGGAAGGAAAGTAGGCCCTGGAGGATATGGACCCTAGTGATGGGGACGGGATaGAGAGGCAGTCAGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: QTGFAEWKESRPWRIWTLVMGTG*RGSQSE Trigger: CTCAGACTGACTGCCTCTGCATCCCGTCCCCATCAC...TAGGGTCCATATCCTCCAGGGCCTACTTTCCTTCCATTCTGCAAAGCCTGTCTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108657.4 ENSMUST00000171247.8 |
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| 3UTR-3UTR CCA 90 bp | TCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCCAGGTCCAACAACTGGCTaGATAGAATTTCGCTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: SLGQQRPDNYQPIPQLGPGPTTG*IEFRWA Trigger: GGCCCAGCGAAATTCTATCCAGCCAGTTGTTGGACC...TGGCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR-3UTR GCA 90 bp | GGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCGTGATGGGGACGGGATaGAGAGGCAGTCAGTCTGAG | + |
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Preference number: 2 (lower is better) Translates to: GWIEFRWASRDLTTINLFVMGTG*RGSQSE Trigger: CTCAGACTGACTGCCTCTGCATCCCGTCCCCATCAC...GAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108657.4 ENSMUST00000171247.8 |
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| 3UTR-3UTR TCA 90 bp | AGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGTGTGGGGTAGGGTaGGATTTCATTGTAGGTGCC | + |
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Preference number: 2 (lower is better) Translates to: RISLGQQRPDNYQPIPQLGCGVG*DFIVGA Trigger: GGCACCTACAATGAAATCTCACCCTACCCCACACCC...AAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGTGGATAAATGCAGACAGGCTTTGCAGAATGGAAGGAAAGTAGGCCCTGGATGGATAGAATTTCGCTaGGCCAGCAGAGACCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: GVDKCRQALQNGRKVGPGWIEFR*ASRDLT Trigger: TGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCA...TCCAGGGCCTACTTTCCTTCCATTCTGCAAAGCCTGTCTGCATTTATCCACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR-3UTR CCA 90 bp | AACTGGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTGGTCCAACAACTGGCTaGATAGAATTTCGCTGGGCC | + |
|
Preference number: 2 (lower is better) Translates to: NWLDRISLGQQRPDNYQPGPTTG*IEFRWA Trigger: GGCCCAGCGAAATTCTATCCAGCCAGTTGTTGGACC...AGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR-3UTR CCA 90 bp | GGGGTGGATAAATGCAGACAGGCTTTGCAGAATGGAAGGAAAGTAGGCCCTGGAACAGGCTTTGCAGAATaGAAGGAAAGTAGGCCCTGG | + |
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Preference number: 2 (lower is better) Translates to: GVDKCRQALQNGRKVGPGTGFAE*KESRPW Trigger: CCAGGGCCTACTTTCCTTCCATTCTGCAAAGCCTGT...TCCAGGGCCTACTTTCCTTCCATTCTGCAAAGCCTGTCTGCATTTATCCACCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR-3UTR GCA 90 bp | ATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGAGATTTCATTGTAGGTaGCAGGGTCCAACAACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: ISLGQQRPDNYQPIPQLGRFHCR*QGPTTG Trigger: GCCAGTTGTTGGACCCTGGCACCTACAATGAAATCT...CCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR-3UTR CCA 90 bp | AGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTTGGATAGAATTTCGCTaGGCCAGCAGAGACCTGACA | + |
|
Preference number: 2 (lower is better) Translates to: RISLGQQRPDNYQPIPQLWIEFR*ASRDLT Trigger: TGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCA...AAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR-3UTR GCA 90 bp | AGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTAGATTTCATTGTAGGTaGCAGGGTCCAACAACTGGC | + |
|
Preference number: 2 (lower is better) Translates to: RISLGQQRPDNYQPIPQLRFHCR*QGPTTG Trigger: GCCAGTTGTTGGACCCTGGCACCTACAATGAAATCT...AAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR-3UTR CCA 90 bp | AACTGGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTGAATCTTACAGGGTGTaGGGTAGGGTGAGATTTCAT | + |
|
Preference number: 2 (lower is better) Translates to: NWLDRISLGQQRPDNYQPESYRV*GRVRFH Trigger: ATGAAATCTCACCCTACCCCACACCCTGTAAGATTC...AGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR TCA 72 bp | TGGAAGGAAAGTAGGCCCTGGAGGATATGGACCCTATaGGGGCCCAAGATAGAATCTTACAGGGTGTGGGGT | + |
|
Preference number: 3 (lower is better) Translates to: WKESRPWRIWTL*GPKIESYRVWG Trigger: ACCCCACACCCTGTAAGATTCTATCTTGGGCCCTCATAGGGTCCATATCCTCCAGGGCCTACTTTCCTTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR GCA 72 bp | TACAGGGTGTGGGGTAGGGTGAGATTTCATTGTAGGTaGCAGGGTCCAACAACTGGCTGGATAGAATTTCGC | + |
|
Preference number: 3 (lower is better) Translates to: YRVWGRVRFHCR*QGPTTGWIEFR Trigger: GCGAAATTCTATCCAGCCAGTTGTTGGACCCTGGCACCTACAATGAAATCTCACCCTACCCCACACCCTGTA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR CCA 72 bp | TGCCAGGGTCCAACAACTGGCTGGATAGAATTTCGCTaGGCCAGCAGAGACCTGACAACTATCAACCTATTC | + |
|
Preference number: 3 (lower is better) Translates to: CQGPTTGWIEFR*ASRDLTTINLF Trigger: GAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTTGTTGGACCCTGGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR CCA 72 bp | AGATTTCATTGTAGGTGCCAGGGTCCAACAACTGGCTaGATAGAATTTCGCTGGGCCAGCAGAGACCTGACA | + |
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Preference number: 3 (lower is better) Translates to: RFHCRCQGPTTG*IEFRWASRDLT Trigger: TGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTTGTTGGACCCTGGCACCTACAATGAAATCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| 3UTR-3UTR CAA 90 bp | GGGGTGGATAAATGCAGACAGGCTTTGCAGAATGGAAGGAAAGTAGGCCCTGGAAAATGCAGACAGGCTTaGCAGAATGGAAGGAAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: GVDKCRQALQNGRKVGPGKCRQA*QNGRKV Trigger: TACTTTCCTTCCATTCTGCAAAGCCTGTCTGCATTT...TCCAGGGCCTACTTTCCTTCCATTCTGCAAAGCCTGTCTGCATTTATCCACCCC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | GGACCGGGAGGATTGTGTCTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGTCGGAGCAGCGCTCATaGTGGGGGCAGCGTCTCACG | + |
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Preference number: 4 (lower is better) Translates to: GPGGLCLSPEVIRQQGEGSEQRS*WGQRLT Trigger: CGTGAGACGCTGCCCCCACCATGAGCGCTGCTCCGA...CCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAGACACAATCCTCCCGGTCC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | TCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCCAGACACGGCTCCCAGCTaGAGGTGTGGCGCTGACCCA | + |
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Preference number: 4 (lower is better) Translates to: SLGQQRPDNYQPIPQLGPDTAPS*RCGADP Trigger: TGGGTCAGCGCCACACCTCCAGCTGGGAGCCGTGTC...TGGCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGGAGGCTGGTGATGGGGACTCTTGTAGATGGCCATaGCGCGGACACGGCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: LSPEVIRQQGEGEAGDGDSCRWP*RGHGSQ Trigger: CTGGGAGCCGTGTCCGCGCCATGGCCATCTACAAGA...GTCCCCATCACCAGCCTCCCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | AGGGTGTGGGGTAGGGTGAGATTTCATTGTAGGTGCCAGGGTCCAACAACTGGCGAGCAGCGCTCATGGTaGGGGCAGCGTCTCACGACC | + |
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Preference number: 4 (lower is better) Translates to: RVWGRVRFHCRCQGPTTGEQRSW*GQRLTT Trigger: GGTCGTGAGACGCTGCCCCCACCATGAGCGCTGCTC...GCCAGTTGTTGGACCCTGGCACCTACAATGAAATCTCACCCTACCCCACACCCT 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGGAGGCTGGTGATGGGGACAGAGCCGGCCTCGGGTaGCTCATAAGGTACCACCAC | + |
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Preference number: 4 (lower is better) Translates to: LSPEVIRQQGEGEAGDGDRAGLG*LIRYHH Trigger: GTGGTGGTACCTTATGAGCCACCCGAGGCCGGCTCT...GTCCCCATCACCAGCCTCCCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR TCA 90 bp | TTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCGGCTGGAGGCTGGAGTaGGCCCTGCTGTCTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: FRWASRDLTTINLFPNLGGWRLE*ALLSPD Trigger: GTCTGGAGACAGCAGGGCTCACTCCAGCCTCCAGCC...GCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108657.4 ENSMUST00000171247.8 |
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| CDS-3UTR TCA 90 bp | TTGTGTCTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGGAGGCTGGTGATGGCTGGAGGCTGGAGTaGGCCCTGCTGTCTCCAGAC | + |
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Preference number: 4 (lower is better) Translates to: LCLSPEVIRQQGEGEAGDGWRLE*ALLSPD Trigger: GTCTGGAGACAGCAGGGCTCACTCCAGCCTCCAGCC...ATCACCAGCCTCCCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAGACACAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108657.4 ENSMUST00000171247.8 |
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| CDS-3UTR GCA 90 bp | TTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCGGGCAGCGCTCTCTTTaGGCTCCCTGGGGGCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: FRWASRDLTTINLFPNLGGQRSL*APWGQF Trigger: GAACTGCCCCCAGGGAGCGCAAAGAGAGCGCTGCCC...GCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | GGACCGGGAGGATTGTGTCTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGTCTTGTAGATGGCCATaGCGCGGACACGGCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: GPGGLCLSPEVIRQQGEGSCRWP*RGHGSQ Trigger: CTGGGAGCCGTGTCCGCGCCATGGCCATCTACAAGA...CCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAGACACAATCCTCCCGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | GGACCGGGAGGATTGTGTCTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGAGAGCCGGCCTCGGGTaGCTCATAAGGTACCACCAC | + |
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Preference number: 4 (lower is better) Translates to: GPGGLCLSPEVIRQQGEGRAGLG*LIRYHH Trigger: GTGGTGGTACCTTATGAGCCACCCGAGGCCGGCTCT...CCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAGACACAATCCTCCCGGTCC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | CGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCCAGAGAGCCGGCCTCGGGTaGCTCATAAGGTACCACCAC | + |
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Preference number: 4 (lower is better) Translates to: RWASRDLTTINLFPNLGQRAGLG*LIRYHH Trigger: GTGGTGGTACCTTATGAGCCACCCGAGGCCGGCTCT...CTGGCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR TCA 90 bp | CTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGGAGGCTGGTGATGGGGACAGAAGGGACAAAAGATaGCAGGGGCCATGGAGTGGC | + |
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Preference number: 4 (lower is better) Translates to: LSPEVIRQQGEGEAGDGDRRDKR*QGPWSG Trigger: GCCACTCCATGGCCCCTGTCATCTTTTGTCCCTTCT...GTCCCCATCACCAGCCTCCCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 17 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR GCA 90 bp | TCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCCATCCACCCGGATAAGATaGTGGGGAGGAGCCAGGCCA | + |
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Preference number: 4 (lower is better) Translates to: SLGQQRPDNYQPIPQLGPSTRIR*WGGARP Trigger: TGGCCTGGCTCCTCCCCAGCATCTTATCCGGGTGGA...TGGCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR GCA 90 bp | GGGGTGGATAAATGCAGACAGGCTTTGCAGAATGGAAGGAAAGTAGGCCCTGGAGGGCAGCGCTCTCTTTaGGCTCCCTGGGGGCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: GVDKCRQALQNGRKVGPGGQRSL*APWGQF Trigger: GAACTGCCCCCAGGGAGCGCAAAGAGAGCGCTGCCC...TCCAGGGCCTACTTTCCTTCCATTCTGCAAAGCCTGTCTGCATTTATCCACCCC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR GCA 90 bp | ATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGGGGCAGCGCTCTCTTTaGGCTCCCTGGGGGCAGTTC | + |
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Preference number: 4 (lower is better) Translates to: ISLGQQRPDNYQPIPQLGGQRSL*APWGQF Trigger: GAACTGCCCCCAGGGAGCGCAAAGAGAGCGCTGCCC...CCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAAT 58% GC, longest homopolymer 6 nt, total homopolymer stretches 15 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | AAAAGGCAGCAGAAGGGACCGGGAGGATTGTGTCTCAGCCCTGAAGTCATAAGAGACACGGCTCCCAGCTaGAGGTGTGGCGCTGACCCA | + |
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Preference number: 4 (lower is better) Translates to: KRQQKGPGGLCLSPEVIRDTAPS*RCGADP Trigger: TGGGTCAGCGCCACACCTCCAGCTGGGAGCCGTGTC...TCTTATGACTTCAGGGCTGAGACACAATCCTCCCGGTCCCTTCTGCTGCCTTTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | TCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCCATCTTGTAGATGGCCATaGCGCGGACACGGCTCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SLGQQRPDNYQPIPQLGPSCRWP*RGHGSQ Trigger: CTGGGAGCCGTGTCCGCGCCATGGCCATCTACAAGA...TGGCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | CGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCCAGGTGACTTCTTGTAGATaGCCATGGCGCGGACACGGC | + |
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Preference number: 4 (lower is better) Translates to: RWASRDLTTINLFPNLGQVTSCR*PWRGHG Trigger: GCCGTGTCCGCGCCATGGCCATCTACAAGAAGTCAC...CTGGCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | ATGGCGGGAAGTAGACTGGCCCTTCTTGGTCTTCAGGTAGCTATAGGAAGACAGGAGCAGCGCTCATGGTaGGGGCAGCGTCTCACGACC | + |
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Preference number: 4 (lower is better) Translates to: MAGSRLALLGLQVAIGRQEQRSW*GQRLTT Trigger: GGTCGTGAGACGCTGCCCCCACCATGAGCGCTGCTC...CTGTCTTCCTATAGCTACCTGAAGACCAAGAAGGGCCAGTCTACTTCCCGCCAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108657.4 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | CAGACAGGCTTTGCAGAATGGAAGGAAAGTAGGCCCTGGAGGATATGGACCCTAGAGCAGCGCTCATGGTaGGGGCAGCGTCTCACGACC | + |
|
Preference number: 4 (lower is better) Translates to: QTGFAEWKESRPWRIWTLEQRSW*GQRLTT Trigger: GGTCGTGAGACGCTGCCCCCACCATGAGCGCTGCTC...TAGGGTCCATATCCTCCAGGGCCTACTTTCCTTCCATTCTGCAAAGCCTGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | ATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGTCGGAGCAGCGCTCATaGTGGGGGCAGCGTCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: ISLGQQRPDNYQPIPQLGSEQRS*WGQRLT Trigger: CGTGAGACGCTGCCCCCACCATGAGCGCTGCTCCGA...CCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAAT 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | CGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCCAGACCCGGATAAGATGCTaGGGAGGAGCCAGGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: RWASRDLTTINLFPNLGQTRIRC*GGARPS Trigger: TGATGGCCTGGCTCCTCCCCAGCATCTTATCCGGGT...CTGGCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | GGACCGGGAGGATTGTGTCTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGTCTCTTTGCGCTCCCTaGGGGCAGTTCAGGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: GPGGLCLSPEVIRQQGEGSLCAP*GQFRAK Trigger: CTTTGCCCTGAACTGCCCCCAGGGAGCGCAAAGAGA...CCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAGACACAATCCTCCCGGTCC 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR GCA 90 bp | CTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGGAGGCTGGTGATGGGGACGCAACAGATCGTCCATaGAGTGAGGTGATGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: LSPEVIRQQGEGEAGDGDATDRP*SEVMAG Trigger: TCCTGCCATCACCTCACTGCATGGACGATCTGTTGC...GTCCCCATCACCAGCCTCCCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAG 57% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
||
| CDS-3UTR GCA 90 bp | GGGTCCAACAACTGGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTTGGCTGTCCCAGACTaGAGGAAGCCCAGGTGGAAG | + |
|
Preference number: 4 (lower is better) Translates to: GSNNWLDRISLGQQRPDNLAVPD*RKPRWK Trigger: CTTCCACCTGGGCTTCCTGCAGTCTGGGACAGCCAA...GTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTTGTTGGACCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR GCA 90 bp | GGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCGGGCAGCGCTCTCTTTaGGCTCCCTGGGGGCAGTTC | + |
|
Preference number: 4 (lower is better) Translates to: GWIEFRWASRDLTTINLFGQRSL*APWGQF Trigger: GAACTGCCCCCAGGGAGCGCAAAGAGAGCGCTGCCC...GAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCC 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | GGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCGACACGGCTCCCAGCTaGAGGTGTGGCGCTGACCCA | + |
|
Preference number: 4 (lower is better) Translates to: GWIEFRWASRDLTTINLFDTAPS*RCGADP Trigger: TGGGTCAGCGCCACACCTCCAGCTGGGAGCCGTGTC...GAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
||
| CDS-3UTR CCA 90 bp | AACTGGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTTCGGAGCAGCGCTCATaGTGGGGGCAGCGTCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: NWLDRISLGQQRPDNYQPSEQRS*WGQRLT Trigger: CGTGAGACGCTGCCCCCACCATGAGCGCTGCTCCGA...AGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTT 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
||
| CDS-3UTR CCA 90 bp | GGACCGGGAGGATTGTGTCTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGTGGTCTTCAGGTAGCTaGAGTGAGCCCTGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GPGGLCLSPEVIRQQGEGWSSGS*SEPCCL Trigger: GAGACAGCAGGGCTCACTCCAGCTACCTGAAGACCA...CCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAGACACAATCCTCCCGGTCC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000005371.12 ENSMUST00000108658.10 |
||
| CDS-3UTR TCA 90 bp | TCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCCAAGAAGGGACAAAAGATaGCAGGGGCCATGGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: SLGQQRPDNYQPIPQLGPRRDKR*QGPWSG Trigger: GCCACTCCATGGCCCCTGTCATCTTTTGTCCCTTCT...TGGCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGGAGGCTGGTGATGGGGACCTCCGTCATGTGCTGTaGCTTCTTGTAGATGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: LSPEVIRQQGEGEAGDGDLRHVL*LLVDGH Trigger: ATGGCCATCTACAAGAAGTCACAGCACATGACGGAG...GTCCCCATCACCAGCCTCCCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
||
| CDS-3UTR TCA 90 bp | CGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCCAGGCTGATATCCGACTGTaGCTCCTCCATGGCAGTCAT | + |
|
Preference number: 4 (lower is better) Translates to: RWASRDLTTINLFPNLGQADIRL*LLHGSH Trigger: ATGACTGCCATGGAGGAGTCACAGTCGGATATCAGC...CTGGCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR GCA 90 bp | CGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCCAGGCAACAGATCGTCCATaGAGTGAGGTGATGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RWASRDLTTINLFPNLGQATDRP*SEVMAG Trigger: TCCTGCCATCACCTCACTGCATGGACGATCTGTTGC...CTGGCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR GCA 90 bp | AAAAGGCAGCAGAAGGGACCGGGAGGATTGTGTCTCAGCCCTGAAGTCATAAGATCCACCCGGATAAGATaGTGGGGAGGAGCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: KRQQKGPGGLCLSPEVIRSTRIR*WGGARP Trigger: TGGCCTGGCTCCTCCCCAGCATCTTATCCGGGTGGA...TCTTATGACTTCAGGGCTGAGACACAATCCTCCCGGTCCCTTCTGCTGCCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | GGGTCCAACAACTGGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACCCTGAAAATGTCTCCTaGCTCAGAGGGAGCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: GSNNWLDRISLGQQRPDNPENVS*LRGSSR Trigger: CCTCGAGCTCCCTCTGAGCCAGGAGACATTTTCAGG...GTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTTGTTGGACCC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | AGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGAGCAGCGCTCATGGTaGGGGCAGCGTCTCACGACC | + |
|
Preference number: 4 (lower is better) Translates to: RISLGQQRPDNYQPIPQLEQRSW*GQRLTT Trigger: GGTCGTGAGACGCTGCCCCCACCATGAGCGCTGCTC...AAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | AGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTTCGGAGCAGCGCTCATaGTGGGGGCAGCGTCTCACG | + |
|
Preference number: 4 (lower is better) Translates to: RISLGQQRPDNYQPIPQLSEQRS*WGQRLT Trigger: CGTGAGACGCTGCCCCCACCATGAGCGCTGCTCCGA...AAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCT 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | CTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGGAGGCTGGTGATGGGGACACTTGTAGTGGATGGTaGTATACTCAGAGCCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LSPEVIRQQGEGEAGDGDTCSGW*YTQSRP Trigger: AGGCCGGCTCTGAGTATACCACCATCCACTACAAGT...GTCCCCATCACCAGCCTCCCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAG 56% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | GGGTCCAACAACTGGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTGGTCTTCAGGTAGCTaGAGTGAGCCCTGCTGTCTC | + |
|
Preference number: 4 (lower is better) Translates to: GSNNWLDRISLGQQRPDNWSSGS*SEPCCL Trigger: GAGACAGCAGGGCTCACTCCAGCTACCTGAAGACCA...GTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTTGTTGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000005371.12 ENSMUST00000108658.10 |
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| CDS-3UTR GCA 90 bp | AGGGTGTGGGGTAGGGTGAGATTTCATTGTAGGTGCCAGGGTCCAACAACTGGCGCAACAGATCGTCCATaGAGTGAGGTGATGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RVWGRVRFHCRCQGPTTGATDRP*SEVMAG Trigger: TCCTGCCATCACCTCACTGCATGGACGATCTGTTGC...GCCAGTTGTTGGACCCTGGCACCTACAATGAAATCTCACCCTACCCCACACCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR GCA 90 bp | ACTGGCCCTTCTTGGTCTTCAGGTAGCTATAGGAAGACAGAAAAGGGGAGGGATTCCACCCGGATAAGATaGTGGGGAGGAGCCAGGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TGPSWSSGSYRKTEKGRDSTRIR*WGGARP Trigger: TGGCCTGGCTCCTCCCCAGCATCTTATCCGGGTGGA...ATCCCTCCCCTTTTCTGTCTTCCTATAGCTACCTGAAGACCAAGAAGGGCCAGT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108657.4 ENSMUST00000171247.8 |
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| CDS-3UTR GCA 90 bp | GGACCGGGAGGATTGTGTCTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGCTGTGGCGAAAAGTCTaGCTGTCTTCCAGATACTCG | + |
|
Preference number: 4 (lower is better) Translates to: GPGGLCLSPEVIRQQGEGLWRKV*LSSRYS Trigger: CGAGTATCTGGAAGACAGGCAGACTTTTCGCCACAG...CCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAGACACAATCCTCCCGGTCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | GGGGTGGATAAATGCAGACAGGCTTTGCAGAATGGAAGGAAAGTAGGCCCTGGAGTGACTTCTTGTAGATaGCCATGGCGCGGACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: GVDKCRQALQNGRKVGPGVTSCR*PWRGHG Trigger: GCCGTGTCCGCGCCATGGCCATCTACAAGAAGTCAC...TCCAGGGCCTACTTTCCTTCCATTCTGCAAAGCCTGTCTGCATTTATCCACCCC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | AAAAGGCAGCAGAAGGGACCGGGAGGATTGTGTCTCAGCCCTGAAGTCATAAGAACCCGGATAAGATGCTaGGGAGGAGCCAGGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: KRQQKGPGGLCLSPEVIRTRIRC*GGARPS Trigger: TGATGGCCTGGCTCCTCCCCAGCATCTTATCCGGGT...TCTTATGACTTCAGGGCTGAGACACAATCCTCCCGGTCCCTTCTGCTGCCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | ATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGTCTCTTTGCGCTCCCTaGGGGCAGTTCAGGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: ISLGQQRPDNYQPIPQLGSLCAP*GQFRAK Trigger: CTTTGCCCTGAACTGCCCCCAGGGAGCGCAAAGAGA...CCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR TCA 90 bp | AGGGTGTGGGGTAGGGTGAGATTTCATTGTAGGTGCCAGGGTCCAACAACTGGCCTCCGTCATGTGCTGTaGCTTCTTGTAGATGGCCAT | + |
|
Preference number: 4 (lower is better) Translates to: RVWGRVRFHCRCQGPTTGLRHVL*LLVDGH Trigger: ATGGCCATCTACAAGAAGTCACAGCACATGACGGAG...GCCAGTTGTTGGACCCTGGCACCTACAATGAAATCTCACCCTACCCCACACCCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | ATGGCGGGAAGTAGACTGGCCCTTCTTGGTCTTCAGGTAGCTATAGGAAGACAGCCTGAAAATGTCTCCTaGCTCAGAGGGAGCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: MAGSRLALLGLQVAIGRQPENVS*LRGSSR Trigger: CCTCGAGCTCCCTCTGAGCCAGGAGACATTTTCAGG...CTGTCTTCCTATAGCTACCTGAAGACCAAGAAGGGCCAGTCTACTTCCCGCCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108657.4 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | AGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTTCTTGTAGATGGCCATaGCGCGGACACGGCTCCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RISLGQQRPDNYQPIPQLSCRWP*RGHGSQ Trigger: CTGGGAGCCGTGTCCGCGCCATGGCCATCTACAAGA...AAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | AACTGGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTGTGACTTCTTGTAGATaGCCATGGCGCGGACACGGC | + |
|
Preference number: 4 (lower is better) Translates to: NWLDRISLGQQRPDNYQPVTSCR*PWRGHG Trigger: GCCGTGTCCGCGCCATGGCCATCTACAAGAAGTCAC...AGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | GGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCACCCGGATAAGATGCTaGGGAGGAGCCAGGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: GWIEFRWASRDLTTINLFTRIRC*GGARPS Trigger: TGATGGCCTGGCTCCTCCCCAGCATCTTATCCGGGT...GAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | ACTGGCCCTTCTTGGTCTTCAGGTAGCTATAGGAAGACAGAAAAGGGGAGGGATACCCGGATAAGATGCTaGGGAGGAGCCAGGCCATCA | + |
|
Preference number: 4 (lower is better) Translates to: TGPSWSSGSYRKTEKGRDTRIRC*GGARPS Trigger: TGATGGCCTGGCTCCTCCCCAGCATCTTATCCGGGT...ATCCCTCCCCTTTTCTGTCTTCCTATAGCTACCTGAAGACCAAGAAGGGCCAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000108657.4 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | TCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCCAACTTGTAGTGGATGGTaGTATACTCAGAGCCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: SLGQQRPDNYQPIPQLGPTCSGW*YTQSRP Trigger: AGGCCGGCTCTGAGTATACCACCATCCACTACAAGT...TGGCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
||
| CDS-3UTR CCA 90 bp | GGGTCCAACAACTGGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACACTTGTAGTGGATGGTaGTATACTCAGAGCCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: GSNNWLDRISLGQQRPDNTCSGW*YTQSRP Trigger: AGGCCGGCTCTGAGTATACCACCATCCACTACAAGT...GTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTTGTTGGACCC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
||
| CDS-3UTR CCA 90 bp | GGACCGGGAGGATTGTGTCTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGTGTACTTGTAGTGGATaGTGGTATACTCAGAGCCGG | + |
|
Preference number: 4 (lower is better) Translates to: GPGGLCLSPEVIRQQGEGCTCSG*WYTQSR Trigger: CCGGCTCTGAGTATACCACCATCCACTACAAGTACA...CCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAGACACAATCCTCCCGGTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
||
| CDS-3UTR CCA 90 bp | AACTGGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTTCTCTTTGCGCTCCCTaGGGGCAGTTCAGGGCAAAG | + |
|
Preference number: 4 (lower is better) Translates to: NWLDRISLGQQRPDNYQPSLCAP*GQFRAK Trigger: CTTTGCCCTGAACTGCCCCCAGGGAGCGCAAAGAGA...AGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
||
| CDS-3UTR TCA 90 bp | AACTGGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTAGAAGGGACAAAAGATaGCAGGGGCCATGGAGTGGC | + |
|
Preference number: 4 (lower is better) Translates to: NWLDRISLGQQRPDNYQPRRDKR*QGPWSG Trigger: GCCACTCCATGGCCCCTGTCATCTTTTGTCCCTTCT...AGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
||
| CDS-3UTR GCA 90 bp | GGGGTGGATAAATGCAGACAGGCTTTGCAGAATGGAAGGAAAGTAGGCCCTGGAGCAACAGATCGTCCATaGAGTGAGGTGATGGCAGGA | + |
|
Preference number: 4 (lower is better) Translates to: GVDKCRQALQNGRKVGPGATDRP*SEVMAG Trigger: TCCTGCCATCACCTCACTGCATGGACGATCTGTTGC...TCCAGGGCCTACTTTCCTTCCATTCTGCAAAGCCTGTCTGCATTTATCCACCCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
||
| CDS-3UTR CCA 90 bp | AACTGGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTCCTGAAAATGTCTCCTaGCTCAGAGGGAGCTCGAGG | + |
|
Preference number: 4 (lower is better) Translates to: NWLDRISLGQQRPDNYQPPENVS*LRGSSR Trigger: CCTCGAGCTCCCTCTGAGCCAGGAGACATTTTCAGG...AGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
||
| CDS-3UTR CCA 90 bp | CAGACAGGCTTTGCAGAATGGAAGGAAAGTAGGCCCTGGAGGATATGGACCCTAAACTCCTCAACATCCTaGGGCAGCAACAGATCGTCC | + |
|
Preference number: 4 (lower is better) Translates to: QTGFAEWKESRPWRIWTLNSSTS*GSNRSS Trigger: GGACGATCTGTTGCTGCCCCAGGATGTTGAGGAGTT...TAGGGTCCATATCCTCCAGGGCCTACTTTCCTTCCATTCTGCAAAGCCTGTCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
||
| CDS-3UTR CCA 90 bp | TTGTGTCTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGGAGGCTGGTGATACTTGTAGTGGATGGTaGTATACTCAGAGCCGGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LCLSPEVIRQQGEGEAGDTCSGW*YTQSRP Trigger: AGGCCGGCTCTGAGTATACCACCATCCACTACAAGT...ATCACCAGCCTCCCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAGACACAA 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | AGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTTCTCTTTGCGCTCCCTaGGGGCAGTTCAGGGCAAAG | + |
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Preference number: 4 (lower is better) Translates to: RISLGQQRPDNYQPIPQLSLCAP*GQFRAK Trigger: CTTTGCCCTGAACTGCCCCCAGGGAGCGCAAAGAGA...AAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR TCA 90 bp | AACTGGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTGCTGATATCCGACTGTaGCTCCTCCATGGCAGTCAT | + |
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Preference number: 4 (lower is better) Translates to: NWLDRISLGQQRPDNYQPADIRL*LLHGSH Trigger: ATGACTGCCATGGAGGAGTCACAGTCGGATATCAGC...AGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR GCA 90 bp | ATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCTGTGGCGAAAAGTCTaGCTGTCTTCCAGATACTCG | + |
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Preference number: 4 (lower is better) Translates to: ISLGQQRPDNYQPIPQLGLWRKV*LSSRYS Trigger: CGAGTATCTGGAAGACAGGCAGACTTTTCGCCACAG...CCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAAT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR GCA 90 bp | AAAAGGCAGCAGAAGGGACCGGGAGGATTGTGTCTCAGCCCTGAAGTCATAAGACTGTGGCGAAAAGTCTaGCTGTCTTCCAGATACTCG | + |
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Preference number: 4 (lower is better) Translates to: KRQQKGPGGLCLSPEVIRLWRKV*LSSRYS Trigger: CGAGTATCTGGAAGACAGGCAGACTTTTCGCCACAG...TCTTATGACTTCAGGGCTGAGACACAATCCTCCCGGTCCCTTCTGCTGCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | TTGTGTCTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGGAGGCTGGTGATTGTACTTGTAGTGGATaGTGGTATACTCAGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: LCLSPEVIRQQGEGEAGDCTCSG*WYTQSR Trigger: CCGGCTCTGAGTATACCACCATCCACTACAAGTACA...ATCACCAGCCTCCCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAGACACAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR GCA 90 bp | ACTGGCCCTTCTTGGTCTTCAGGTAGCTATAGGAAGACAGAAAAGGGGAGGGATCTGTGGCGAAAAGTCTaGCTGTCTTCCAGATACTCG | + |
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Preference number: 4 (lower is better) Translates to: TGPSWSSGSYRKTEKGRDLWRKV*LSSRYS Trigger: CGAGTATCTGGAAGACAGGCAGACTTTTCGCCACAG...ATCCCTCCCCTTTTCTGTCTTCCTATAGCTACCTGAAGACCAAGAAGGGCCAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000108657.4 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | GGAAGTAGACTGGCCCTTCTTGGTCTTCAGGTAGCTATAGGAAGACAGAAAAGGAACTCCTCAACATCCTaGGGCAGCAACAGATCGTCC | + |
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Preference number: 4 (lower is better) Translates to: GSRLALLGLQVAIGRQKRNSSTS*GSNRSS Trigger: GGACGATCTGTTGCTGCCCCAGGATGTTGAGGAGTT...CCTTTTCTGTCTTCCTATAGCTACCTGAAGACCAAGAAGGGCCAGTCTACTTCC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000108657.4 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | ATGGCGGGAAGTAGACTGGCCCTTCTTGGTCTTCAGGTAGCTATAGGAAGACAGTGTACTTGTAGTGGATaGTGGTATACTCAGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: MAGSRLALLGLQVAIGRQCTCSG*WYTQSR Trigger: CCGGCTCTGAGTATACCACCATCCACTACAAGTACA...CTGTCTTCCTATAGCTACCTGAAGACCAAGAAGGGCCAGTCTACTTCCCGCCAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000108657.4 ENSMUST00000171247.8 |
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| CDS-3UTR CCA 90 bp | GGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCTGTACTTGTAGTGGATaGTGGTATACTCAGAGCCGG | + |
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Preference number: 4 (lower is better) Translates to: GWIEFRWASRDLTTINLFCTCSG*WYTQSR Trigger: CCGGCTCTGAGTATACCACCATCCACTACAAGTACA...GAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS TCA 90 bp | AGATGGCCATGGCGCGGACACGGCTCCCAGCTGGAGGTGTGGCGCTaGCCCACAACTGCACAGGGCACGTCTTCGCCAGCTGGCAGAATA | + |
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Preference number: 5 (lower is better) Translates to: RWPWRGHGSQLEVWR*PTTAQGTSSPAGRI Trigger: TATTCTGCCAGCTGGCGAAGACGTGCCCTGTGCAGTTGTGGGTCAGCGCCACACCTCCAGCTGGGAGCCGTGTCCGCGCCATGGCCATCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CAA 90 bp | GGGTCCAACAACTGGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACGCGGGGGAGAGGCGCTaGTGCAGGTGGGCAGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: GSNNWLDRISLGQQRPDNAGERR*CRWAAL Trigger: GAGCGCTGCCCACCTGCACAAGCGCCTCTCCCCCGC...GTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTTGTTGGACCC 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CAA 90 bp | TTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCGCGGGGGAGAGGCGCTaGTGCAGGTGGGCAGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: FRWASRDLTTINLFPNLGAGERR*CRWAAL Trigger: GAGCGCTGCCCACCTGCACAAGCGCCTCTCCCCCGC...GCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CAA 90 bp | CGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCCAGTGGGCAGCGCTCTCTTaGCGCTCCCTGGGGGCAGTT | + |
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Preference number: 5 (lower is better) Translates to: RWASRDLTTINLFPNLGQWAALS*RSLGAV Trigger: AACTGCCCCCAGGGAGCGCAAAGAGAGCGCTGCCCA...CTGGCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CAA 90 bp | ATGGCGGGAAGTAGACTGGCCCTTCTTGGTCTTCAGGTAGCTATAGGAAGACAGGCGGGGGAGAGGCGCTaGTGCAGGTGGGCAGCGCTC | + |
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Preference number: 5 (lower is better) Translates to: MAGSRLALLGLQVAIGRQAGERR*CRWAAL Trigger: GAGCGCTGCCCACCTGCACAAGCGCCTCTCCCCCGC...CTGTCTTCCTATAGCTACCTGAAGACCAAGAAGGGCCAGTCTACTTCCCGCCAT 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000108657.4 ENSMUST00000171247.8 |
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| CDS-3UTR CAA 90 bp | GGGTCCAACAACTGGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTGGGCAGCGCTCTCTTaGCGCTCCCTGGGGGCAGTT | + |
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Preference number: 5 (lower is better) Translates to: GSNNWLDRISLGQQRPDNWAALS*RSLGAV Trigger: AACTGCCCCCAGGGAGCGCAAAGAGAGCGCTGCCCA...GTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTTGTTGGACCC 60% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CAA 90 bp | TTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTGGGCTGGGCAGCGCTCTCTTaGCGCTCCCTGGGGGCAGTT | + |
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Preference number: 5 (lower is better) Translates to: FRWASRDLTTINLFPNLGWAALS*RSLGAV Trigger: AACTGCCCCCAGGGAGCGCAAAGAGAGCGCTGCCCA...GCCCAAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CAA 90 bp | CTCAGCCCTGAAGTCATAAGACAGCAAGGAGAGGGGGAGGCTGGTGATGGGGACGTGCACATAACAGACTaGGCTGTCCCAGACTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: LSPEVIRQQGEGEAGDGDVHITD*AVPDCR Trigger: CCTGCAGTCTGGGACAGCCAAGTCTGTTATGTGCAC...GTCCCCATCACCAGCCTCCCCCTCTCCTTGCTGTCTTATGACTTCAGGGCTGAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CAA 90 bp | CAGACAGGCTTTGCAGAATGGAAGGAAAGTAGGCCCTGGAGGATATGGACCCTATGGGCAGCGCTCTCTTaGCGCTCCCTGGGGGCAGTT | + |
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Preference number: 5 (lower is better) Translates to: QTGFAEWKESRPWRIWTLWAALS*RSLGAV Trigger: AACTGCCCCCAGGGAGCGCAAAGAGAGCGCTGCCCA...TAGGGTCCATATCCTCCAGGGCCTACTTTCCTTCCATTCTGCAAAGCCTGTCTG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS CCA 90 bp | GGTGTGGCGCTGACCCACAACTGCACAGGGCACGTCTTCGCCAGCTaGCAGAATAGCTTATTGAGGGGAGGAGAGTACGTGCACATAACA | + |
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Preference number: 5 (lower is better) Translates to: GVALTHNCTGHVFAS*QNSLLRGGEYVHIT Trigger: TGTTATGTGCACGTACTCTCCTCCCCTCAATAAGCTATTCTGCCAGCTGGCGAAGACGTGCCCTGTGCAGTTGTGGGTCAGCGCCACACC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CAA 90 bp | GGGTCCAACAACTGGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACGTGCACATAACAGACTaGGCTGTCCCAGACTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GSNNWLDRISLGQQRPDNVHITD*AVPDCR Trigger: CCTGCAGTCTGGGACAGCCAAGTCTGTTATGTGCAC...GTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCCAGTTGTTGGACCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CAA 90 bp | GGCTGGATAGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCGTGCACATAACAGACTaGGCTGTCCCAGACTGCAGG | + |
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Preference number: 5 (lower is better) Translates to: GWIEFRWASRDLTTINLFVHITD*AVPDCR Trigger: CCTGCAGTCTGGGACAGCCAAGTCTGTTATGTGCAC...GAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCTATCCAGCC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CAA 90 bp | AAAAGGCAGCAGAAGGGACCGGGAGGATTGTGTCTCAGCCCTGAAGTCATAAGATGGCAGAATAGCTTATaGAGGGGAGGAGAGTACGTG | + |
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Preference number: 5 (lower is better) Translates to: KRQQKGPGGLCLSPEVIRWQNSL*RGGEYV Trigger: CACGTACTCTCCTCCCCTCAATAAGCTATTCTGCCA...TCTTATGACTTCAGGGCTGAGACACAATCCTCCCGGTCCCTTCTGCTGCCTTTT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS CCA 90 bp | ATATCTTCTGGAGGAAGTAGTTTCCATAAGCCTGAAAATGTCTCCTaGCTCAGAGGGAGCTCGAGGCTGATATCCGACTGTGACTCCTCC | + |
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Preference number: 5 (lower is better) Translates to: ISSGGSSFHKPENVS*LRGSSRLISDCDSS Trigger: GGAGGAGTCACAGTCGGATATCAGCCTCGAGCTCCCTCTGAGCCAGGAGACATTTTCAGGCTTATGGAAACTACTTCCTCCAGAAGATAT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS-3UTR CAA 90 bp | AGAATTTCGCTGGGCCAGCAGAGACCTGACAACTATCAACCTATTCCCCAACTTTGGCAGAATAGCTTATaGAGGGGAGGAGAGTACGTG | + |
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Preference number: 5 (lower is better) Translates to: RISLGQQRPDNYQPIPQLWQNSL*RGGEYV Trigger: CACGTACTCTCCTCCCCTCAATAAGCTATTCTGCCA...AAGTTGGGGAATAGGTTGATAGTTGTCAGGTCTCTGCTGGCCCAGCGAAATTCT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS GCA 72 bp | CGGCTCCCAGCTGGAGGTGTGGCGCTGACCCACAACTaGACAGGGCACGTCTTCGCCAGCTGGCAGAATAGC | + |
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Preference number: 6 (lower is better) Translates to: RLPAGGVALTHN*TGHVFASWQNS Trigger: GCTATTCTGCCAGCTGGCGAAGACGTGCCCTGTGCAGTTGTGGGTCAGCGCCACACCTCCAGCTGGGAGCCG 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS CCA 72 bp | GGAGCCAGGCCATCACCATCGGAGCAGCGCTCATGGTaGGGGCAGCGTCTCACGACCTCCGTCATGTGCTGT | + |
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Preference number: 6 (lower is better) Translates to: GARPSPSEQRSW*GQRLTTSVMCC Trigger: ACAGCACATGACGGAGGTCGTGAGACGCTGCCCCCACCATGAGCGCTGCTCCGATGGTGATGGCCTGGCTCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS CCA 72 bp | TCGGGATACAAATTTCCTTCCACCCGGATAAGATGCTaGGGAGGAGCCAGGCCATCACCATCGGAGCAGCGC | + |
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Preference number: 6 (lower is better) Translates to: SGYKFPSTRIRC*GGARPSPSEQR Trigger: GCGCTGCTCCGATGGTGATGGCCTGGCTCCTCCCCAGCATCTTATCCGGGTGGAAGGAAATTTGTATCCCGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS CAA 90 bp | CACAACTGCACAGGGCACGTCTTCGCCAGCTGGCAGAATAGCTTATaGAGGGGAGGAGAGTACGTGCACATAACAGACTTGGCTGTCCCA | + |
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Preference number: 6 (lower is better) Translates to: HNCTGHVFASWQNSL*RGGEYVHITDLAVP Trigger: TGGGACAGCCAAGTCTGTTATGTGCACGTACTCTCCTCCCCTCAATAAGCTATTCTGCCAGCTGGCGAAGACGTGCCCTGTGCAGTTGTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS GCA 72 bp | ACTCCTCAACATCCTGGGGCAGCAACAGATCGTCCATaGAGTGAGGTGATGGCAGGATATCTTCTGGAGGAA | + |
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Preference number: 6 (lower is better) Translates to: TPQHPGAATDRP*SEVMAGYLLEE Trigger: TTCCTCCAGAAGATATCCTGCCATCACCTCACTGCATGGACGATCTGTTGCTGCCCCAGGATGTTGAGGAGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS CCA 72 bp | CCATGCAGGAGCTATTACACATGTACTTGTAGTGGATaGTGGTATACTCAGAGCCGGCCTCGGGTGGCTCAT | + |
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Preference number: 6 (lower is better) Translates to: PCRSYYTCTCSG*WYTQSRPRVAH Trigger: ATGAGCCACCCGAGGCCGGCTCTGAGTATACCACCATCCACTACAAGTACATGTGTAATAGCTCCTGCATGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS CAA 72 bp | ACAGGGCACGTCTTCGCCAGCTGGCAGAATAGCTTATaGAGGGGAGGAGAGTACGTGCACATAACAGACTTG | + |
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Preference number: 6 (lower is better) Translates to: TGHVFASWQNSL*RGGEYVHITDL Trigger: CAAGTCTGTTATGTGCACGTACTCTCCTCCCCTCAATAAGCTATTCTGCCAGCTGGCGAAGACGTGCCCTGT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS CCA 72 bp | GGAGGAAGTAGTTTCCATAAGCCTGAAAATGTCTCCTaGCTCAGAGGGAGCTCGAGGCTGATATCCGACTGT | + |
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Preference number: 6 (lower is better) Translates to: GGSSFHKPENVS*LRGSSRLISDC Trigger: ACAGTCGGATATCAGCCTCGAGCTCCCTCTGAGCCAGGAGACATTTTCAGGCTTATGGAAACTACTTCCTCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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| CDS CCA 72 bp | TGCAGGAGCTATTACACATGTACTTGTAGTGGATGGTaGTATACTCAGAGCCGGCCTCGGGTGGCTCATAAG | + |
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Preference number: 6 (lower is better) Translates to: CRSYYTCTCSGW*YTQSRPRVAHK Trigger: CTTATGAGCCACCCGAGGCCGGCTCTGAGTATACCACCATCCACTACAAGTACATGTGTAATAGCTCCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000005371.12 ENSMUST00000108657.4 ENSMUST00000108658.10 ENSMUST00000171247.8 |
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