Pregenerated sensors for TRMU (Mus musculus)
Ensembl gene IDs: ENSMUSG00000022386Ensembl transcript IDs: ENSMUST00000023019.12, ENSMUST00000162339.8, ENSMUST00000162491.8
Found 87 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR CCA 90 bp | ACAGAGCTGGGTGGTCCACCCGGGGAGCCACAAGCACGTCACCCTTaGTGCCATCCTTCTCCACCACGTACCAGGGCTCTCTCAAGCCGC | + |
|
Preference number: 1 (lower is better) Translates to: TELGGPPGEPQARHP*CHPSPPRTRALSSR Trigger: GCGGCTTGAGAGAGCCCTGGTACGTGGTGGAGAAGGATGGCACCAAGGGTGACGTGCTTGTGGCTCCCCGGGTGGACCACCCAGCTCTGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| 3UTR CCA 90 bp | AATCCAGTGTACTCGGTTGGTCCTGAGCAGGTCCCTGTACAGAGCTaGGTGGTCCACCCGGGGAGCCACAAGCACGTCACCCTTGGTGCC | + |
|
Preference number: 1 (lower is better) Translates to: NPVYSVGPEQVPVQS*VVHPGSHKHVTLGA Trigger: GGCACCAAGGGTGACGTGCTTGTGGCTCCCCGGGTGGACCACCCAGCTCTGTACAGGGACCTGCTCAGGACCAACCGAGTACACTGGATT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| 3UTR GCA 90 bp | GATGCGGTTTCTCCATTGGCCTCCTGGATGCTGTGGAAGAGCAGCTaGATCAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTGGAGCA | + |
|
Preference number: 1 (lower is better) Translates to: DAVSPLASWMLWKSS*IRAHSQHTLWFPGA Trigger: TGCTCCAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTGATGCAGCTGCTCTTCCACAGCATCCAGGAGGCCAATGGAGAAACCGCATC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| 3UTR CCA 90 bp | ACAGTTTTATTTGATGCGGTTTCTCCATTGGCCTCCTGGATGCTGTaGAAGAGCAGCTGCATCAGGGCCCACAGCCAGCACACGCTCTGG | + |
|
Preference number: 1 (lower is better) Translates to: TVLFDAVSPLASWML*KSSCIRAHSQHTLW Trigger: CCAGAGCGTGTGCTGGCTGTGGGCCCTGATGCAGCTGCTCTTCCACAGCATCCAGGAGGCCAATGGAGAAACCGCATCAAATAAAACTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| 3UTR CCA 90 bp | TCCACCACGTACCAGGGCTCTCTCAAGCCGCTGATCTTAGCTCTCTaGCCCAAAGTGTACAGGAACCAACCTGGCTCTGAGGTCAGCTAT | + |
|
Preference number: 1 (lower is better) Translates to: STTYQGSLKPLILAL*PKVYRNQPGSEVSY Trigger: ATAGCTGACCTCAGAGCCAGGTTGGTTCCTGTACACTTTGGGCCAGAGAGCTAAGATCAGCGGCTTGAGAGAGCCCTGGTACGTGGTGGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| 3UTR CAA 90 bp | TACAGAGCTGGGTGGTCCACCCGGGGAGCCACAAGCACGTCACCCTaGGTGCCATCCTTCTCCACCACGTACCAGGGCTCTCTCAAGCCG | + |
|
Preference number: 2 (lower is better) Translates to: YRAGWSTRGATSTSP*VPSFSTTYQGSLKP Trigger: CGGCTTGAGAGAGCCCTGGTACGTGGTGGAGAAGGATGGCACCAAGGGTGACGTGCTTGTGGCTCCCCGGGTGGACCACCCAGCTCTGTA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| 3UTR-3UTR TCA 90 bp | CTCCACCACGTACCAGGGCTCTCTCAAGCCGCTGATCTTAGCTCTCTGGCCCAAGAACCAACCTGGCTCTaGGGTCAGCTATGTTCTTTC | + |
|
Preference number: 2 (lower is better) Translates to: LHHVPGLSQAADLSSLAQEPTWL*GQLCSF Trigger: GAAAGAACATAGCTGACCTCAGAGCCAGGTTGGTTC...TTGGGCCAGAGAGCTAAGATCAGCGGCTTGAGAGAGCCCTGGTACGTGGTGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| 3UTR-3UTR TCA 90 bp | AGACACAGTCTCACTCCAGCTCTGAATCTTTGTGTGTTCCCAGAACTGTATTATCGAGGCTGCAAATACTaGAGAAGGAAATGCTCCAAG | + |
|
Preference number: 2 (lower is better) Translates to: RHSLTPALNLCVFPELYYRGCKY*RRKCSK Trigger: CTTGGAGCATTTCCTTCTTCAGTATTTGCAGCCTCG...ATAATACAGTTCTGGGAACACACAAAGATTCAGAGCTGGAGTGAGACTGTGTCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| 3UTR CCA 72 bp | GGTGGTCCACCCGGGGAGCCACAAGCACGTCACCCTTaGTGCCATCCTTCTCCACCACGTACCAGGGCTCTC | + |
|
Preference number: 3 (lower is better) Translates to: GGPPGEPQARHP*CHPSPPRTRAL Trigger: GAGAGCCCTGGTACGTGGTGGAGAAGGATGGCACCAAGGGTGACGTGCTTGTGGCTCCCCGGGTGGACCACC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| 3UTR GCA 72 bp | GGTCCACCCGGGGAGCCACAAGCACGTCACCCTTGGTaGCATCCTTCTCCACCACGTACCAGGGCTCTCTCA | + |
|
Preference number: 3 (lower is better) Translates to: GPPGEPQARHPW*HPSPPRTRALS Trigger: TGAGAGAGCCCTGGTACGTGGTGGAGAAGGATGGCACCAAGGGTGACGTGCTTGTGGCTCCCCGGGTGGACC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| 3UTR CCA 72 bp | CATCAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTaGAGCAGCAGCGTAGACCCTCCTTCCTCTGCAGCC | + |
|
Preference number: 3 (lower is better) Translates to: HQGPQPAHALVS*SSSVDPPSSAA Trigger: GGCTGCAGAGGAAGGAGGGTCTACGCTGCTGCTCCAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTGATG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| 3UTR CCA 72 bp | TACTCGGTTGGTCCTGAGCAGGTCCCTGTACAGAGCTaGGTGGTCCACCCGGGGAGCCACAAGCACGTCACC | + |
|
Preference number: 3 (lower is better) Translates to: YSVGPEQVPVQS*VVHPGSHKHVT Trigger: GGTGACGTGCTTGTGGCTCCCCGGGTGGACCACCCAGCTCTGTACAGGGACCTGCTCAGGACCAACCGAGTA 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| 3UTR-3UTR CAA 90 bp | GAGCAGCTGCATCAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTGGAGCAGCCAGCCAGCCCGCCTATaGATTCTGGCAGCACTAACA | + |
|
Preference number: 3 (lower is better) Translates to: EQLHQGPQPAHALVSWSSQPARL*ILAALT Trigger: TGTTAGTGCTGCCAGAATCAATAGGCGGGCTGGCTG...GCTGCTCCAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTGATGCAGCTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| 3UTR-3UTR CAA 90 bp | GTGGTCCACCCGGGGAGCCACAAGCACGTCACCCTTGGTGCCATCCTTCTCCACTCCAGCTCTGAATCTTaGTGTGTTCCCAGAACTGTA | + |
|
Preference number: 3 (lower is better) Translates to: VVHPGSHKHVTLGAILLHSSSES*CVPRTV Trigger: TACAGTTCTGGGAACACACAAAGATTCAGAGCTGGA...GTGGAGAAGGATGGCACCAAGGGTGACGTGCTTGTGGCTCCCCGGGTGGACCAC 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| 3UTR CCA 72 bp | TACCAGGGCTCTCTCAAGCCGCTGATCTTAGCTCTCTaGCCCAAAGTGTACAGGAACCAACCTGGCTCTGAG | + |
|
Preference number: 3 (lower is better) Translates to: YQGSLKPLILAL*PKVYRNQPGSE Trigger: CTCAGAGCCAGGTTGGTTCCTGTACACTTTGGGCCAGAGAGCTAAGATCAGCGGCTTGAGAGAGCCCTGGTA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| 3UTR GCA 72 bp | TTTTATTTGATGCGGTTTCTCCATTGGCCTCCTGGATaGTGTGGAAGAGCAGCTGCATCAGGGCCCACAGCC | + |
|
Preference number: 3 (lower is better) Translates to: FYLMRFLHWPPG*CGRAAASGPTA Trigger: GGCTGTGGGCCCTGATGCAGCTGCTCTTCCACAGCATCCAGGAGGCCAATGGAGAAACCGCATCAAATAAAA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| 3UTR TCA 72 bp | CCGCCTATTGATTCTGGCAGCACTAACACCCATCACTaGCGACTCTGCTCTAATGCCTCCTCCTTGGCCTTT | + |
|
Preference number: 3 (lower is better) Translates to: PPIDSGSTNTHH*RLCSNASSLAF Trigger: AAAGGCCAAGGAGGAGGCATTAGAGCAGAGTCGTCAGTGATGGGTGTTAGTGCTGCCAGAATCAATAGGCGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| 3UTR TCA 72 bp | ATAGAAACAAACTTTCCAGGCCGAGGCTGCAAATACTaGAGAAGGAAATGCTCCAAGTTTCTCTTACCAATG | + |
|
Preference number: 3 (lower is better) Translates to: IETNFPGRGCKY*RRKCSKFLLPM Trigger: CATTGGTAAGAGAAACTTGGAGCATTTCCTTCTTCAGTATTTGCAGCCTCGGCCTGGAAAGTTTGTTTCTAT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| 3UTR CAA 72 bp | GGGTGGTCCACCCGGGGAGCCACAAGCACGTCACCCTaGGTGCCATCCTTCTCCACCACGTACCAGGGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: GWSTRGATSTSP*VPSFSTTYQGS Trigger: AGAGCCCTGGTACGTGGTGGAGAAGGATGGCACCAAGGGTGACGTGCTTGTGGCTCCCCGGGTGGACCACCC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| CDS-3UTR CCA 90 bp | CAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTGGAGCAGCAGCGTAGACCCTCTGTACAGAGCTGGGTaGTCCACCCGGGGAGCCACA | + |
|
Preference number: 4 (lower is better) Translates to: QGPQPAHALVSWSSSVDPLYRAG*STRGAT Trigger: TGTGGCTCCCCGGGTGGACCACCCAGCTCTGTACAG...AGGGTCTACGCTGCTGCTCCAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CCA 90 bp | TGTGGAAGAGCAGCTGCATCAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTGTGTGGGGTGCAGGCCTaGGCTGTCACTGGAGGCCTC | + |
|
Preference number: 4 (lower is better) Translates to: CGRAAASGPTASTRSGFLCGVQA*AVTGGL Trigger: GAGGCCTCCAGTGACAGCCCAGGCCTGCACCCCACA...CAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTGATGCAGCTGCTCTTCCACA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR GCA 90 bp | TCAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTGGAGCAGCAGCGTAGACCCGCACGTCACCCTTGGTaGCATCCTTCTCCACCACGT | + |
|
Preference number: 4 (lower is better) Translates to: SGPTASTRSGFLEQQRRPARHPW*HPSPPR Trigger: ACGTGGTGGAGAAGGATGGCACCAAGGGTGACGTGC...GGGTCTACGCTGCTGCTCCAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTGA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CCA 90 bp | CCTTCCTCTGCAGCCAGCCCGCCTATTGATTCTGGCAGCACTAACACCCATCACGTCCCTGTACAGAGCTaGGTGGTCCACCCGGGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: PSSAASPPIDSGSTNTHHVPVQS*VVHPGS Trigger: GCTCCCCGGGTGGACCACCCAGCTCTGTACAGGGAC...GTGATGGGTGTTAGTGCTGCCAGAATCAATAGGCGGGCTGGCTGCAGAGGAAGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CCA 90 bp | CGCTCTGGTTTCCTGGAGCAGCAGCGTAGACCCTCCTTCCTCTGCAGCCAGCCCGCATCCTGGGAAACCTaGCTGAGAAAGAAGGTCTGG | + |
|
Preference number: 4 (lower is better) Translates to: RSGFLEQQRRPSFLCSQPASWET*LRKKVW Trigger: CCAGACCTTCTTTCTCAGCCAGGTTTCCCAGGATGC...GGGCTGGCTGCAGAGGAAGGAGGGTCTACGCTGCTGCTCCAGGAAACCAGAGCG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CCA 90 bp | AGCGTAGACCCTCCTTCCTCTGCAGCCAGCCCGCCTATTGATTCTGGCAGCACTGACCAAGGCAGCAGGTaGCTCCTCCGCAATCCAGTG | + |
|
Preference number: 4 (lower is better) Translates to: SVDPPSSAASPPIDSGSTDQGSR*LLRNPV Trigger: CACTGGATTGCGGAGGAGCCACCTGCTGCCTTGGTC...AGTGCTGCCAGAATCAATAGGCGGGCTGGCTGCAGAGGAAGGAGGGTCTACGCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR TCA 90 bp | GACCCTCCTTCCTCTGCAGCCAGCCCGCCTATTGATTCTGGCAGCACTAACACCGTACTCGGTTGGTCCTaGGCAGGTCCCTGTACAGAG | + |
|
Preference number: 4 (lower is better) Translates to: DPPSSAASPPIDSGSTNTVLGWS*AGPCTE Trigger: CTCTGTACAGGGACCTGCTCAGGACCAACCGAGTAC...GGTGTTAGTGCTGCCAGAATCAATAGGCGGGCTGGCTGCAGAGGAAGGAGGGTC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR TCA 90 bp | AAGAGCAGCTGCATCAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTGGAGCACCATCATCTTGTCTCTaGCCAAGGCAGCAGGTGGCT | + |
|
Preference number: 4 (lower is better) Translates to: KSSCIRAHSQHTLWFPGAPSSCL*PRQQVA Trigger: AGCCACCTGCTGCCTTGGTCAGAGACAAGATGATGG...TGCTCCAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTGATGCAGCTGCTCTT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CCA 90 bp | AGCAGCTGCATCAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTGGAGCAGCACTTCTCAGGGCATCCTaGGAAACCTGGCTGAGAAAG | + |
|
Preference number: 4 (lower is better) Translates to: SSCIRAHSQHTLWFPGAALLRAS*ETWLRK Trigger: CTTTCTCAGCCAGGTTTCCCAGGATGCCCTGAGAAG...TGCTGCTCCAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTGATGCAGCTGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CCA 90 bp | ACACGCTCTGGTTTCCTGGAGCAGCAGCGTAGACCCTCCTTCCTCTGCAGCCAGCAAGCACGTCACCCTTaGTGCCATCCTTCTCCACCA | + |
|
Preference number: 4 (lower is better) Translates to: TRSGFLEQQRRPSFLCSQQARHP*CHPSPP Trigger: TGGTGGAGAAGGATGGCACCAAGGGTGACGTGCTTG...CTGGCTGCAGAGGAAGGAGGGTCTACGCTGCTGCTCCAGGAAACCAGAGCGTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR GCA 90 bp | GAAGAGCAGCTGCATCAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTGGAGCACCCTTGTAGAACACTaGAAACTGTCCCAGGGCAAG | + |
|
Preference number: 4 (lower is better) Translates to: EEQLHQGPQPAHALVSWSTLVEH*KLSQGK Trigger: CTTGCCCTGGGACAGTTTGCAGTGTTCTACAAGGGT...GCTCCAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTGATGCAGCTGCTCTTC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR TCA 90 bp | CAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTGGAGCAGCAGCGTAGACCCTAGTTTCTCTTACCAATaGAGCAGATGCCCATGCTCT | + |
|
Preference number: 4 (lower is better) Translates to: QGPQPAHALVSWSSSVDPSFSYQ*SRCPCS Trigger: AGAGCATGGGCATCTGCTTCATTGGTAAGAGAAACT...AGGGTCTACGCTGCTGCTCCAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR GCA 90 bp | GTGGTCCACCCGGGGAGCCACAAGCACGTCACCCTTGGTGCCATCCTTCTCCACTCAGGCTTCTTAGTGTaGTTTTGCTCAAAGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: VVHPGSHKHVTLGAILLHSGFLV*FCSKTS Trigger: GGAAGTCTTTGAGCAAAAGCACACTAAGAAGCCTGA...GTGGAGAAGGATGGCACCAAGGGTGACGTGCTTGTGGCTCCCCGGGTGGACCAC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| CDS-3UTR CCA 90 bp | CTCCTTCCTCTGCAGCCAGCCCGCCTATTGATTCTGGCAGCACTAACACCCATCACTAGTGCCATCTGGTaGCGGAATCGGAAATGGCAC | + |
|
Preference number: 4 (lower is better) Translates to: LLPLQPARLLILAALTPITSAIW*RNRKWH Trigger: GTGCCATTTCCGATTCCGCCACCAGATGGCACTAGT...GATGGGTGTTAGTGCTGCCAGAATCAATAGGCGGGCTGGCTGCAGAGGAAGGAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CCA 90 bp | GCAGCACTAACACCCATCACTGACGACTCTGCTCTAATGCCTCCTCCTTGGCCTGGCACTAGTGCCATCTaGTGGCGGAATCGGAAATGG | + |
|
Preference number: 4 (lower is better) Translates to: AALTPITDDSALMPPPWPGTSAI*WRNRKW Trigger: CCATTTCCGATTCCGCCACCAGATGGCACTAGTGCC...AGGCCAAGGAGGAGGCATTAGAGCAGAGTCGTCAGTGATGGGTGTTAGTGCTGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR TCA 90 bp | GAGCAGCTGCATCAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTGGAGCAGCGGGATGTCTAAGATCTaGCAAACTTTATACGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: EQLHQGPQPAHALVSWSSGMSKI*QTLYAS Trigger: AGATGCGTATAAAGTTTGTCAGATCTTAGACATCCC...GCTGCTCCAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTGATGCAGCTGCTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CCA 90 bp | GACCCTCCTTCCTCTGCAGCCAGCCCGCCTATTGATTCTGGCAGCACTAACACCTGGCGGAATCGGAAATaGCACTCCATCATCTTGTCT | + |
|
Preference number: 4 (lower is better) Translates to: DPPSSAASPPIDSGSTNTWRNRK*HSIILS Trigger: AGACAAGATGATGGAGTGCCATTTCCGATTCCGCCA...GGTGTTAGTGCTGCCAGAATCAATAGGCGGGCTGGCTGCAGAGGAAGGAGGGTC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR GCA 90 bp | GAGCAGCTGCATCAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTGGAGCAGCCAACTGAACTTGATATaGTTATTGCAGTTGATGTCG | + |
|
Preference number: 4 (lower is better) Translates to: EQLHQGPQPAHALVSWSSQLNLI*LLQLMS Trigger: CGACATCAACTGCAATAAGCATATCAAGTTCAGTTG...GCTGCTCCAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTGATGCAGCTGCTC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CCA 90 bp | TGGAGCAGCAGCGTAGACCCTCCTTCCTCTGCAGCCAGCCCGCCTATTGATTCTAAGCTGTCAGCTGCTTaGAGAAGTTTTACGGGGTTT | + |
|
Preference number: 4 (lower is better) Translates to: WSSSVDPPSSAASPPIDSKLSAA*RSFTGF Trigger: AAACCCCGTAAAACTTCTCCAAGCAGCTGACAGCTT...AGAATCAATAGGCGGGCTGGCTGCAGAGGAAGGAGGGTCTACGCTGCTGCTCCA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR TCA 90 bp | GCCAGCACACGCTCTGGTTTCCTGGAGCAGCAGCGTAGACCCTCCTTCCTCTGCCGTTCAAAAAGTCACTaGACACATCATTCCAATACT | + |
|
Preference number: 4 (lower is better) Translates to: ASTRSGFLEQQRRPSFLCRSKSH*THHSNT Trigger: AGTATTGGAATGATGTGTTCAGTGACTTTTTGAACG...GCAGAGGAAGGAGGGTCTACGCTGCTGCTCCAGGAAACCAGAGCGTGTGCTGGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR GCA 90 bp | GACCCTCCTTCCTCTGCAGCCAGCCCGCCTATTGATTCTGGCAGCACTAACACCTCAGGCTTCTTAGTGTaGTTTTGCTCAAAGACTTCC | + |
|
Preference number: 4 (lower is better) Translates to: DPPSSAASPPIDSGSTNTSGFLV*FCSKTS Trigger: GGAAGTCTTTGAGCAAAAGCACACTAAGAAGCCTGA...GGTGTTAGTGCTGCCAGAATCAATAGGCGGGCTGGCTGCAGAGGAAGGAGGGTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR GCA 90 bp | TGGAGCAGCAGCGTAGACCCTCCTTCCTCTGCAGCCAGCCCGCCTATTGATTCTTTCTTAGTGTGCTTTTaGTCAAAGACTTCCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: WSSSVDPPSSAASPPIDSFLVCF*SKTSSS Trigger: GGATGAGGAAGTCTTTGAGCAAAAGCACACTAAGAA...AGAATCAATAGGCGGGCTGGCTGCAGAGGAAGGAGGGTCTACGCTGCTGCTCCA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CCA 90 bp | GCAGCACTAACACCCATCACTGACGACTCTGCTCTAATGCCTCCTCCTTGGCCTCTGAGAAAGAAGGTCTaGTCTTTAAAGCTGTCAGCT | + |
|
Preference number: 4 (lower is better) Translates to: AALTPITDDSALMPPPWPLRKKV*SLKLSA Trigger: AGCTGACAGCTTTAAAGACCAGACCTTCTTTCTCAG...AGGCCAAGGAGGAGGCATTAGAGCAGAGTCGTCAGTGATGGGTGTTAGTGCTGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR TCA 90 bp | TTTTATTTGATGCGGTTTCTCCATTGGCCTCCTGGATGCTGTGGAAGAGCAGCTCGAGGCTGCAAATACTaGAGAAGGAAATGCTCCAAG | + |
|
Preference number: 4 (lower is better) Translates to: FYLMRFLHWPPGCCGRAARGCKY*RRKCSK Trigger: CTTGGAGCATTTCCTTCTTCAGTATTTGCAGCCTCG...AGCTGCTCTTCCACAGCATCCAGGAGGCCAATGGAGAAACCGCATCAAATAAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR TCA 90 bp | TTGGAGAAGTTTTACGGGGTTTCTGACTTCAAATCGATTTCTGAACAGCCCGTCGGGATGTCTAAGATCTaGCAAACTTTATACGCATCT | + |
|
Preference number: 4 (lower is better) Translates to: LEKFYGVSDFKSISEQPVGMSKI*QTLYAS Trigger: AGATGCGTATAAAGTTTGTCAGATCTTAGACATCCC...GACGGGCTGTTCAGAAATCGATTTGAAGTCAGAAACCCCGTAAAACTTCTCCAA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000162491.8 |
||
| CDS-3UTR GCA 90 bp | ACACAGTCTCACTCCAGCTCTGAATCTTTGTGTGTTCCCAGAACTGTATTATCCTTCTTAGTGTGCTTTTaGTCAAAGACTTCCTCATCC | + |
|
Preference number: 4 (lower is better) Translates to: TQSHSSSESLCVPRTVLSFLVCF*SKTSSS Trigger: GGATGAGGAAGTCTTTGAGCAAAAGCACACTAAGAA...GGATAATACAGTTCTGGGAACACACAAAGATTCAGAGCTGGAGTGAGACTGTGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| CDS TCA 90 bp | AGGCCCCTCACAGCCTTCACAGCCGTTACCCACACAGTGCCATCCTaGTTGAGAGTCAGCACGCAGGGCACTAGTGCCATCTGGTGGCGG | + |
|
Preference number: 5 (lower is better) Translates to: RPLTAFTAVTHTVPS*LRVSTQGTSAIWWR Trigger: CCGCCACCAGATGGCACTAGTGCCCTGCGTGCTGACTCTCAATCAGGATGGCACTGTGTGGGTAACGGCTGTGAAGGCTGTGAGGGGCCT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CAA 90 bp | GAGCAGCTGCATCAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTGGAGCAGCGCATCTTCACAGTCCTaGTCAGCAGCACAAACGCCC | + |
|
Preference number: 5 (lower is better) Translates to: EQLHQGPQPAHALVSWSSASSQS*SAAQTP Trigger: GGGCGTTTGTGCTGCTGACAAGGACTGTGAAGATGC...GCTGCTCCAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTGATGCAGCTGCTC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CAA 90 bp | TGTGGAAGAGCAGCTGCATCAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTGACAAGCACGTCACCCTaGGTGCCATCCTTCTCCACC | + |
|
Preference number: 5 (lower is better) Translates to: CGRAAASGPTASTRSGFLTSTSP*VPSFST Trigger: GGTGGAGAAGGATGGCACCAAGGGTGACGTGCTTGT...CAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTGATGCAGCTGCTCTTCCACA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS TCA 90 bp | CCCTCACAGCCTTCACAGCCGTTACCCACACAGTGCCATCCTGATTaGGAGTCAGCACGCAGGGCACTAGTGCCATCTGGTGGCGGAATC | + |
|
Preference number: 5 (lower is better) Translates to: PSQPSQPLPTQCHPD*ESARRALVPSGGGI Trigger: GATTCCGCCACCAGATGGCACTAGTGCCCTGCGTGCTGACTCTCAATCAGGATGGCACTGTGTGGGTAACGGCTGTGAAGGCTGTGAGGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CAA 90 bp | AGCGTAGACCCTCCTTCCTCTGCAGCCAGCCCGCCTATTGATTCTGGCAGCACTATCCAGTGTACTCGGTaGGTCCTGAGCAGGTCCCTG | + |
|
Preference number: 5 (lower is better) Translates to: SVDPPSSAASPPIDSGSTIQCTR*VLSRSL Trigger: CAGGGACCTGCTCAGGACCAACCGAGTACACTGGAT...AGTGCTGCCAGAATCAATAGGCGGGCTGGCTGCAGAGGAAGGAGGGTCTACGCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CAA 90 bp | GGAAGAGCAGCTGCATCAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTGGAGTGGCACTCCATCATCTaGTCTCTGACCAAGGCAGCA | + |
|
Preference number: 5 (lower is better) Translates to: GRAAASGPTASTRSGFLEWHSII*SLTKAA Trigger: TGCTGCCTTGGTCAGAGACAAGATGATGGAGTGCCA...CTCCAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTGATGCAGCTGCTCTTCC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS GCA 90 bp | TCTGGAGTGTGTAGGCAGACGGCCCTAGCCGCAGGATTTTCCCACTaGCGAGGCACTCCTCACCCTTGTAGAACACTGCAAACTGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: SGVCRQTALAAGFSH*RGTPHPCRTLQTVP Trigger: TGGGACAGTTTGCAGTGTTCTACAAGGGTGAGGAGTGCCTCGGCAGTGGGAAAATCCTGCGGCTAGGGCCGTCTGCCTACACACTCCAGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CAA 90 bp | TCAGGGCCCACAGCCAGCACACGCTCTGGTTTCCTGGAGCAGCAGCGTAGACCCAAAGCTGTCAGCTGCTaGGAGAAGTTTTACGGGGTT | + |
|
Preference number: 5 (lower is better) Translates to: SGPTASTRSGFLEQQRRPKAVSC*EKFYGV Trigger: AACCCCGTAAAACTTCTCCAAGCAGCTGACAGCTTT...GGGTCTACGCTGCTGCTCCAGGAAACCAGAGCGTGTGCTGGCTGTGGGCCCTGA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS TCA 90 bp | CCATCTGGTGGCGGAATCGGAAATGGCACTCCATCATCTTGTCTCTaGCCAAGGCAGCAGGTGGCTCCTCCGCAATCCAGTGTACTCGGT | + |
|
Preference number: 5 (lower is better) Translates to: PSGGGIGNGTPSSCL*PRQQVAPPQSSVLG Trigger: ACCGAGTACACTGGATTGCGGAGGAGCCACCTGCTGCCTTGGTCAGAGACAAGATGATGGAGTGCCATTTCCGATTCCGCCACCAGATGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS CCA 90 bp | TCGGAAATGGCACTCCATCATCTTGTCTCTGACCAAGGCAGCAGGTaGCTCCTCCGCAATCCAGTGTACTCGGTTGGTCCTGAGCAGGTC | + |
|
Preference number: 5 (lower is better) Translates to: SEMALHHLVSDQGSR*LLRNPVYSVGPEQV Trigger: GACCTGCTCAGGACCAACCGAGTACACTGGATTGCGGAGGAGCCACCTGCTGCCTTGGTCAGAGACAAGATGATGGAGTGCCATTTCCGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CAA 90 bp | GCCAGCACACGCTCTGGTTTCCTGGAGCAGCAGCGTAGACCCTCCTTCCTCTGCTACAGGAACCAACCTTaGTGTGTTCCCAGAACTGTA | + |
|
Preference number: 5 (lower is better) Translates to: ASTRSGFLEQQRRPSFLCYRNQP*CVPRTV Trigger: TACAGTTCTGGGAACACACAAAGGTTGGTTCCTGTA...GCAGAGGAAGGAGGGTCTACGCTGCTGCTCCAGGAAACCAGAGCGTGTGCTGGC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS TCA 90 bp | AGGCTTCTTAGTGTGCTTTTGCTCAAAGACTTCCTCATCCTCCAGTaGGGTCCTGGCGTAGTGGCCAGTGGCAACGGCATCTGCTCCAAG | + |
|
Preference number: 5 (lower is better) Translates to: RLLSVLLLKDFLILQ*GPGVVASGNGICSK Trigger: CTTGGAGCAGATGCCGTTGCCACTGGCCACTACGCCAGGACCTCACTGGAGGATGAGGAAGTCTTTGAGCAAAAGCACACTAAGAAGCCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023019.12 ENSMUST00000162339.8 |
||
| CDS CCA 90 bp | TCCCCCAGGGGAAAGATGGTCCTTCTCAGGGCATCCTGGGAAACCTaGCTGAGAAAGAAGGTCTGGTCTTTAAAGCTGTCAGCTGCTTGG | + |
|
Preference number: 5 (lower is better) Translates to: SPRGKMVLLRASWET*LRKKVWSLKLSAAW Trigger: CCAAGCAGCTGACAGCTTTAAAGACCAGACCTTCTTTCTCAGCCAGGTTTCCCAGGATGCCCTGAGAAGGACCATCTTTCCCCTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS CCA 90 bp | TCCACCACGTACCAGGGCTCTCTCAAGCCGCTGATCTTAGCTCTCTaGCCCAAAGTGTACAGGAACCAACCTTTGTGTGTTCCCAGAACT | + |
|
Preference number: 5 (lower is better) Translates to: STTYQGSLKPLILAL*PKVYRNQPLCVPRT Trigger: AGTTCTGGGAACACACAAAGGTTGGTTCCTGTACACTTTGGGCCAGAGAGCTAAGATCAGCGGCTTGAGAGAGCCCTGGTACGTGGTGGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS CCA 90 bp | CAAAGACTTCCTCATCCTCCAGTGAGGTCCTGGCGTAGTGGCCAGTaGCAACGGCATCTGCTCCAAGATTGTCCACAGCATAGTGATAAA | + |
|
Preference number: 5 (lower is better) Translates to: QRLPHPPVRSWRSGQ*QRHLLQDCPQHSDK Trigger: TTTATCACTATGCTGTGGACAATCTTGGAGCAGATGCCGTTGCCACTGGCCACTACGCCAGGACCTCACTGGAGGATGAGGAAGTCTTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023019.12 ENSMUST00000162339.8 |
||
| CDS-3UTR CAA 90 bp | GACCCTCCTTCCTCTGCAGCCAGCCCGCCTATTGATTCTGGCAGCACTAACACCCTTCTTAGTGTGCTTTaGCTCAAAGACTTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: DPPSSAASPPIDSGSTNTLLSVL*LKDFLI Trigger: GATGAGGAAGTCTTTGAGCAAAAGCACACTAAGAAG...GGTGTTAGTGCTGCCAGAATCAATAGGCGGGCTGGCTGCAGAGGAAGGAGGGTC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS GCA 90 bp | ACTTTATACGCATCTTCACAGTCCTTGTCAGCAGCACAAACGCCCTaGTCATCCAGCGAGTCCCAGTTCTTCATAAATACCCCTGTCACC | + |
|
Preference number: 5 (lower is better) Translates to: TLYASSQSLSAAQTP*SSSESQFFINTPVT Trigger: GGTGACAGGGGTATTTATGAAGAACTGGGACTCGCTGGATGAGCAGGGCGTTTGTGCTGCTGACAAGGACTGTGAAGATGCGTATAAAGT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023019.12 ENSMUST00000162491.8 |
||
| CDS GCA 90 bp | CTGACTTCAAATCGATTTCTGAACAGCCCGTCAGGCTTCTTAGTGTaGTTTTGCTCAAAGACTTCCTCATCCTCCAGTGAGGTCCTGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LTSNRFLNSPSGFLV*FCSKTSSSSSEVLA Trigger: CGCCAGGACCTCACTGGAGGATGAGGAAGTCTTTGAGCAAAAGCACACTAAGAAGCCTGACGGGCTGTTCAGAAATCGATTTGAAGTCAG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023019.12 ENSMUST00000162339.8 |
||
| CDS CCA 90 bp | TTTGTTAGTTCCCCCAGGGGAAAGATGGTCCTTCTCAGGGCATCCTaGGAAACCTGGCTGAGAAAGAAGGTCTGGTCTTTAAAGCTGTCA | + |
|
Preference number: 5 (lower is better) Translates to: FVSSPRGKMVLLRAS*ETWLRKKVWSLKLS Trigger: TGACAGCTTTAAAGACCAGACCTTCTTTCTCAGCCAGGTTTCCCAGGATGCCCTGAGAAGGACCATCTTTCCCCTGGGGGAACTAACAAA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS-3UTR CAA 90 bp | CAAGCCGCTGATCTTAGCTCTCTGGCCCAAAGTGTACAGGAACCAACCTGGCTCCTTCTTAGTGTGCTTTaGCTCAAAGACTTCCTCATC | + |
|
Preference number: 5 (lower is better) Translates to: QAADLSSLAQSVQEPTWLLLSVL*LKDFLI Trigger: GATGAGGAAGTCTTTGAGCAAAAGCACACTAAGAAG...GAGCCAGGTTGGTTCCTGTACACTTTGGGCCAGAGAGCTAAGATCAGCGGCTTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162339.8 |
||
| CDS-3UTR CAA 90 bp | TCTGACTTCAAATCGATTTCTGAACAGCCCGTCAGGCTTCTTAGTGTGCTTTTGGCATCTTCACAGTCCTaGTCAGCAGCACAAACGCCC | + |
|
Preference number: 5 (lower is better) Translates to: SDFKSISEQPVRLLSVLLASSQS*SAAQTP Trigger: GGGCGTTTGTGCTGCTGACAAGGACTGTGAAGATGC...CAAAAGCACACTAAGAAGCCTGACGGGCTGTTCAGAAATCGATTTGAAGTCAGA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000162491.8 |
||
| CDS CCA 90 bp | ACCTGGCTGAGAAAGAAGGTCTGGTCTTTAAAGCTGTCAGCTGCTTaGAGAAGTTTTACGGGGTTTCTGACTTCAAATCGATTTCTGAAC | + |
|
Preference number: 5 (lower is better) Translates to: TWLRKKVWSLKLSAA*RSFTGFLTSNRFLN Trigger: GTTCAGAAATCGATTTGAAGTCAGAAACCCCGTAAAACTTCTCCAAGCAGCTGACAGCTTTAAAGACCAGACCTTCTTTCTCAGCCAGGT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS CAA 90 bp | CTGACCAAGGCAGCAGGTGGCTCCTCCGCAATCCAGTGTACTCGGTaGGTCCTGAGCAGGTCCCTGTACAGAGCTGGGTGGTCCACCCGG | + |
|
Preference number: 6 (lower is better) Translates to: LTKAAGGSSAIQCTR*VLSRSLYRAGWSTR Trigger: CCGGGTGGACCACCCAGCTCTGTACAGGGACCTGCTCAGGACCAACCGAGTACACTGGATTGCGGAGGAGCCACCTGCTGCCTTGGTCAG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS CAA 72 bp | GCAGCAGGTGGCTCCTCCGCAATCCAGTGTACTCGGTaGGTCCTGAGCAGGTCCCTGTACAGAGCTGGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: AAGGSSAIQCTR*VLSRSLYRAGW Trigger: CCACCCAGCTCTGTACAGGGACCTGCTCAGGACCAACCGAGTACACTGGATTGCGGAGGAGCCACCTGCTGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS GCA 72 bp | TGTAGGCAGACGGCCCTAGCCGCAGGATTTTCCCACTaGCGAGGCACTCCTCACCCTTGTAGAACACTGCAA | + |
|
Preference number: 6 (lower is better) Translates to: CRQTALAAGFSH*RGTPHPCRTLQ Trigger: TTGCAGTGTTCTACAAGGGTGAGGAGTGCCTCGGCAGTGGGAAAATCCTGCGGCTAGGGCCGTCTGCCTACA 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS CCA 72 bp | CCTCATCCTCCAGTGAGGTCCTGGCGTAGTGGCCAGTaGCAACGGCATCTGCTCCAAGATTGTCCACAGCAT | + |
|
Preference number: 6 (lower is better) Translates to: PHPPVRSWRSGQ*QRHLLQDCPQH Trigger: ATGCTGTGGACAATCTTGGAGCAGATGCCGTTGCCACTGGCCACTACGCCAGGACCTCACTGGAGGATGAGG 58% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023019.12 ENSMUST00000162339.8 |
||
| CDS TCA 72 bp | GGCGGAATCGGAAATGGCACTCCATCATCTTGTCTCTaGCCAAGGCAGCAGGTGGCTCCTCCGCAATCCAGT | + |
|
Preference number: 6 (lower is better) Translates to: GGIGNGTPSSCL*PRQQVAPPQSS Trigger: ACTGGATTGCGGAGGAGCCACCTGCTGCCTTGGTCAGAGACAAGATGATGGAGTGCCATTTCCGATTCCGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS TCA 72 bp | ACAGCCTTCACAGCCGTTACCCACACAGTGCCATCCTaGTTGAGAGTCAGCACGCAGGGCACTAGTGCCATC | + |
|
Preference number: 6 (lower is better) Translates to: TAFTAVTHTVPS*LRVSTQGTSAI Trigger: GATGGCACTAGTGCCCTGCGTGCTGACTCTCAATCAGGATGGCACTGTGTGGGTAACGGCTGTGAAGGCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS CCA 72 bp | GCACTCCATCATCTTGTCTCTGACCAAGGCAGCAGGTaGCTCCTCCGCAATCCAGTGTACTCGGTTGGTCCT | + |
|
Preference number: 6 (lower is better) Translates to: ALHHLVSDQGSR*LLRNPVYSVGP Trigger: AGGACCAACCGAGTACACTGGATTGCGGAGGAGCCACCTGCTGCCTTGGTCAGAGACAAGATGATGGAGTGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS CAA 72 bp | ATCTGGTGGCGGAATCGGAAATGGCACTCCATCATCTaGTCTCTGACCAAGGCAGCAGGTGGCTCCTCCGCA | + |
|
Preference number: 6 (lower is better) Translates to: IWWRNRKWHSII*SLTKAAGGSSA Trigger: TGCGGAGGAGCCACCTGCTGCCTTGGTCAGAGACAAGATGATGGAGTGCCATTTCCGATTCCGCCACCAGAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS CAA 90 bp | ACTAGTGCCATCTGGTGGCGGAATCGGAAATGGCACTCCATCATCTaGTCTCTGACCAAGGCAGCAGGTGGCTCCTCCGCAATCCAGTGT | + |
|
Preference number: 6 (lower is better) Translates to: TSAIWWRNRKWHSII*SLTKAAGGSSAIQC Trigger: ACACTGGATTGCGGAGGAGCCACCTGCTGCCTTGGTCAGAGACAAGATGATGGAGTGCCATTTCCGATTCCGCCACCAGATGGCACTAGT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS TCA 72 bp | AGTGTGCTTTTGCTCAAAGACTTCCTCATCCTCCAGTaGGGTCCTGGCGTAGTGGCCAGTGGCAACGGCATC | + |
|
Preference number: 6 (lower is better) Translates to: SVLLLKDFLILQ*GPGVVASGNGI Trigger: GATGCCGTTGCCACTGGCCACTACGCCAGGACCTCACTGGAGGATGAGGAAGTCTTTGAGCAAAAGCACACT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023019.12 ENSMUST00000162339.8 |
||
| CDS CCA 72 bp | TCCCCCAGGGGAAAGATGGTCCTTCTCAGGGCATCCTaGGAAACCTGGCTGAGAAAGAAGGTCTGGTCTTTA | + |
|
Preference number: 6 (lower is better) Translates to: SPRGKMVLLRAS*ETWLRKKVWSL Trigger: TAAAGACCAGACCTTCTTTCTCAGCCAGGTTTCCCAGGATGCCCTGAGAAGGACCATCTTTCCCCTGGGGGA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS CCA 72 bp | TTGAGAGTCAGCACGCAGGGCACTAGTGCCATCTGGTaGCGGAATCGGAAATGGCACTCCATCATCTTGTCT | + |
|
Preference number: 6 (lower is better) Translates to: LRVSTQGTSAIW*RNRKWHSIILS Trigger: AGACAAGATGATGGAGTGCCATTTCCGATTCCGCCACCAGATGGCACTAGTGCCCTGCGTGCTGACTCTCAA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS TCA 72 bp | CCTGGCGTAGTGGCCAGTGGCAACGGCATCTGCTCCTaGACACATCATTCCAATACTCCTTCACATAGGACA | + |
|
Preference number: 6 (lower is better) Translates to: PGVVASGNGICS*THHSNTPSHRT Trigger: TGTCCTATGTGAAGGAGTATTGGAATGATGTGTTCAGGAGCAGATGCCGTTGCCACTGGCCACTACGCCAGG 53% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000162491.8 |
||
| CDS GCA 72 bp | GCATCTTCACAGTCCTTGTCAGCAGCACAAACGCCCTaGTCATCCAGCGAGTCCCAGTTCTTCATAAATACC | + |
|
Preference number: 6 (lower is better) Translates to: ASSQSLSAAQTP*SSSESQFFINT Trigger: GGTATTTATGAAGAACTGGGACTCGCTGGATGAGCAGGGCGTTTGTGCTGCTGACAAGGACTGTGAAGATGC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000023019.12 ENSMUST00000162491.8 |
||
| CDS CCA 72 bp | TACCAGGGCTCTCTCAAGCCGCTGATCTTAGCTCTCTaGCCCAAAGTGTACAGGAACCAACCTTTGTGTGTT | + |
|
Preference number: 6 (lower is better) Translates to: YQGSLKPLILAL*PKVYRNQPLCV Trigger: AACACACAAAGGTTGGTTCCTGTACACTTTGGGCCAGAGAGCTAAGATCAGCGGCTTGAGAGAGCCCTGGTA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS GCA 72 bp | TTTCTGAACAGCCCGTCAGGCTTCTTAGTGTGCTTTTaGTCAAAGACTTCCTCATCCTCCAGTGAGGTCCTG | + |
|
Preference number: 6 (lower is better) Translates to: FLNSPSGFLVCF*SKTSSSSSEVL Trigger: CAGGACCTCACTGGAGGATGAGGAAGTCTTTGAGCAAAAGCACACTAAGAAGCCTGACGGGCTGTTCAGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023019.12 ENSMUST00000162339.8 |
||
| CDS CCA 72 bp | GGAAAGATGGTCCTTCTCAGGGCATCCTGGGAAACCTaGCTGAGAAAGAAGGTCTGGTCTTTAAAGCTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: GKMVLLRASWET*LRKKVWSLKLS Trigger: TGACAGCTTTAAAGACCAGACCTTCTTTCTCAGCCAGGTTTCCCAGGATGCCCTGAGAAGGACCATCTTTCC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS GCA 72 bp | AATCGATTTCTGAACAGCCCGTCAGGCTTCTTAGTGTaGTTTTGCTCAAAGACTTCCTCATCCTCCAGTGAG | + |
|
Preference number: 6 (lower is better) Translates to: NRFLNSPSGFLV*FCSKTSSSSSE Trigger: CTCACTGGAGGATGAGGAAGTCTTTGAGCAAAAGCACACTAAGAAGCCTGACGGGCTGTTCAGAAATCGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000023019.12 ENSMUST00000162339.8 |
||
| CDS CAA 72 bp | GAGAAAGAAGGTCTGGTCTTTAAAGCTGTCAGCTGCTaGGAGAAGTTTTACGGGGTTTCTGACTTCAAATCG | + |
|
Preference number: 6 (lower is better) Translates to: EKEGLVFKAVSC*EKFYGVSDFKS Trigger: CGATTTGAAGTCAGAAACCCCGTAAAACTTCTCCAAGCAGCTGACAGCTTTAAAGACCAGACCTTCTTTCTC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||
| CDS CAA 90 bp | AACCTGGCTGAGAAAGAAGGTCTGGTCTTTAAAGCTGTCAGCTGCTaGGAGAAGTTTTACGGGGTTTCTGACTTCAAATCGATTTCTGAA | + |
|
Preference number: 6 (lower is better) Translates to: NLAEKEGLVFKAVSC*EKFYGVSDFKSISE Trigger: TTCAGAAATCGATTTGAAGTCAGAAACCCCGTAAAACTTCTCCAAGCAGCTGACAGCTTTAAAGACCAGACCTTCTTTCTCAGCCAGGTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000023019.12 |
||