Pregenerated sensors for TRMT9B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000039620Ensembl transcript IDs: ENSMUST00000135373.8, ENSMUST00000147525.9, ENSMUST00000152039.9, ENSMUST00000171777.2
Found 163 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CATGCTGTGGGACCGTTTGGAATCACATCTGCCCTTAAAACACACTaGGCAGCCGCACACGGAACCGGGGCCCTGGAAGCCTCGGCTCCT | + |
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Preference number: 1 (lower is better) Translates to: HAVGPFGITSALKTH*AAAHGTGALEASAP Trigger: AGGAGCCGAGGCTTCCAGGGCCCCGGTTCCGTGTGCGGCTGCGCAGTGTGTTTTAAGGGCAGATGTGATTCCAAACGGTCCCACAGCATG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR CCA 90 bp | GTGTCTGGAAGGCTGTTGGGACACGGTGCTATTGGCCCAAGCCTCTaGGATTTTCATGGGCCTGACTCTTTCAATTTGCTTCCTCAGGGT | + |
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Preference number: 1 (lower is better) Translates to: VSGRLLGHGAIGPSL*DFHGPDSFNLLPQG Trigger: ACCCTGAGGAAGCAAATTGAAAGAGTCAGGCCCATGAAAATCCCAGAGGCTTGGGCCAATAGCACCGTGTCCCAACAGCCTTCCAGACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR TCA 90 bp | GCAGGCTGGAGAGCTCACCTTCCCGAAATACATGGTAGTAACGCATaGAGGCTTTGGAATCGGTGGCATCCCGTTGTGCTTCCAAAAAGC | + |
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Preference number: 1 (lower is better) Translates to: AGWRAHLPEIHGSNA*RLWNRWHPVVLPKS Trigger: GCTTTTTGGAAGCACAACGGGATGCCACCGATTCCAAAGCCTTCATGCGTTACTACCATGTATTTCGGGAAGGTGAGCTCTCCAGCCTGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR TCA 90 bp | GGGACACGGTGCTATTGGCCCAAGCCTCTGGGATTTTCATGGGCCTaGCTCTTTCAATTTGCTTCCTCAGGGTTGATTCATCCAAAGACC | + |
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Preference number: 1 (lower is better) Translates to: GTRCYWPKPLGFSWA*LFQFASSGLIHPKT Trigger: GGTCTTTGGATGAATCAACCCTGAGGAAGCAAATTGAAAGAGTCAGGCCCATGAAAATCCCAGAGGCTTGGGCCAATAGCACCGTGTCCC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR TCA 90 bp | TTTCCCAAAATTGCTATACAATCCGTTCTCTCGCTCGCCTTCCTTTaGAATAGCTTCGCAGCAGGTTCTGGCCACCGCAGACCCATAGTC | + |
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Preference number: 1 (lower is better) Translates to: FPKIAIQSVLSLAFL*NSFAAGSGHRRPIV Trigger: GACTATGGGTCTGCGGTGGCCAGAACCTGCTGCGAAGCTATTTCAAAGGAAGGCGAGCGAGAGAACGGATTGTATAGCAATTTTGGGAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR CCA 90 bp | CAACCAACGTGTGTGCATAGCCAGCCTATAGTTACTGAAGCACTCTaGTCTTATTTCATAACTGCCAACAACCAGCCAACATCCCCCACC | + |
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Preference number: 1 (lower is better) Translates to: QPTCVHSQPIVTEAL*SYFITANNQPTSPT Trigger: GGTGGGGGATGTTGGCTGGTTGTTGGCAGTTATGAAATAAGACCAGAGTGCTTCAGTAACTATAGGCTGGCTATGCACACACGTTGGTTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR GCA 90 bp | GGGAGAAAGATGCGTAGTCTTTTCTTAGCCTGCTTAATGCATTCTTaGAGGCAACAATCACAGTTAATCTTGAACACTTGGTTGCCTGCT | + |
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Preference number: 1 (lower is better) Translates to: GRKMRSLFLACLMHS*RQQSQLILNTWLPA Trigger: AGCAGGCAACCAAGTGTTCAAGATTAACTGTGATTGTTGCCTGCAAGAATGCATTAAGCAGGCTAAGAAAAGACTACGCATCTTTCTCCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR TCA 90 bp | AAGTTCCCTGAACTTTCACTTCCGTCAGGCAGTGGAACTCTGTGTTaGTGCCAGGAAGGATCTAGAAAAACATCATTTTGTCTTAACAGT | + |
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Preference number: 1 (lower is better) Translates to: KFPELSLPSGSGTLC*CQEGSRKTSFCLNS Trigger: ACTGTTAAGACAAAATGATGTTTTTCTAGATCCTTCCTGGCATCAACACAGAGTTCCACTGCCTGACGGAAGTGAAAGTTCAGGGAACTT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR CCA 90 bp | TTGTTTCTCCCGGGCCTAGTCTCTTGTTCCTTCATAATTGTTCCTTaGGATCCACAACATAGAATTAATCACAGTCGTGGTTTAGTCTTA | + |
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Preference number: 1 (lower is better) Translates to: LFLPGLVSCSFIIVP*DPQHRINHSRGLVL Trigger: TAAGACTAAACCACGACTGTGATTAATTCTATGTTGTGGATCCCAAGGAACAATTATGAAGGAACAAGAGACTAGGCCCGGGAGAAACAA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR GCA 90 bp | AAAGAAGACATAAAGGGGAGAAAGATGCGTAGTCTTTTCTTAGCCTaGTTAATGCATTCTTGCAGGCAACAATCACAGTTAATCTTGAAC | + |
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Preference number: 1 (lower is better) Translates to: KEDIKGRKMRSLFLA*LMHSCRQQSQLILN Trigger: GTTCAAGATTAACTGTGATTGTTGCCTGCAAGAATGCATTAAGCAGGCTAAGAAAAGACTACGCATCTTTCTCCCCTTTATGTCTTCTTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR-3UTR CCA 90 bp | GTGGCATCCCGTTGTGCTTCCAAAAAGCTTGAGTCTTCTGAGTTGGAGTCGTTGACGGAACCGGGGCCCTaGAAGCCTCGGCTCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: VASRCASKKLESSELESLTEPGP*KPRLLG Trigger: TCCCAGGAGCCGAGGCTTCCAGGGCCCCGGTTCCGT...CAACGACTCCAACTCAGAAGACTCAAGCTTTTTGGAAGCACAACGGGATGCCAC 58% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR-3UTR GCA 90 bp | TATGACACATTTGTGCAGTGGCCAGAAGAGGGTATTGAACCCCTTGGAGCCAGAAGTTGTGAGCTGCTGTaGAGTGTCCACAAGGCTCTA | + |
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Preference number: 2 (lower is better) Translates to: YDTFVQWPEEGIEPLGARSCELL*SVHKAL Trigger: TAGAGCCTTGTGGACACTGCACAGCAGCTCACAACT...TCTGGCTCCAAGGGGTTCAATACCCTCTTCTGGCCACTGCACAAATGTGTCATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152039.9 |
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| 3UTR-3UTR CCA 90 bp | AGCTTGAGTCTTCTGAGTTGGAGTCGTTGGAGTCGAATGCAGAAACCCTCCTTAATTGGCCCAAGCCTCTaGGATTTTCATGGGCCTGAC | + |
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Preference number: 2 (lower is better) Translates to: SLSLLSWSRWSRMQKPSLIGPSL*DFHGPD Trigger: GTCAGGCCCATGAAAATCCCAGAGGCTTGGGCCAAT...TAAGGAGGGTTTCTGCATTCGACTCCAACGACTCCAACTCAGAAGACTCAAGCT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR-3UTR TCA 90 bp | ATGATGTATGACACATTTGTGCAGTGGCCAGAAGAGGGTATTGAACCCCTTGGAAGGTACAGACAGTTGTaGGCTGCTGTGCAGTGTCCA | + |
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Preference number: 2 (lower is better) Translates to: MMYDTFVQWPEEGIEPLGRYRQL*AAVQCP Trigger: TGGACACTGCACAGCAGCTCACAACTGTCTGTACCT...TCCAAGGGGTTCAATACCCTCTTCTGGCCACTGCACAAATGTGTCATACATCAT 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152039.9 |
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| 3UTR CAA 90 bp | AGGAAGATGCGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTaGAAAACAATGAAACAGGATGCTGCTTCTGGTACCCACACCAGC | + |
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Preference number: 2 (lower is better) Translates to: RKMRSKCLSTNSYLD*KTMKQDAASGTHTS Trigger: GCTGGTGTGGGTACCAGAAGCAGCATCCTGTTTCATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCGCATCTTCCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| 3UTR-3UTR GCA 90 bp | AAAATGATGTATGACACATTTGTGCAGTGGCCAGAAGAGGGTATTGAACCCCTTCAGACAGTTGTGAGCTaGTGTGCAGTGTCCACAAGG | + |
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Preference number: 2 (lower is better) Translates to: KMMYDTFVQWPEEGIEPLQTVVS*CAVSTR Trigger: CCTTGTGGACACTGCACAGCAGCTCACAACTGTCTG...AAGGGGTTCAATACCCTCTTCTGGCCACTGCACAAATGTGTCATACATCATTTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152039.9 |
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| 3UTR CAA 90 bp | TCGGTGGCATCCCGTTGTGCTTCCAAAAAGCTTGAGTCTTCTGAGTaGGAGTCGTTGGAGTCGAATGCAGAAACCCTCCTTAATATTTTT | + |
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Preference number: 2 (lower is better) Translates to: SVASRCASKKLESSE*ESLESNAETLLNIF Trigger: AAAAATATTAAGGAGGGTTTCTGCATTCGACTCCAACGACTCCAACTCAGAAGACTCAAGCTTTTTGGAAGCACAACGGGATGCCACCGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR CAA 90 bp | CAGCTCCCTCTTTTTCTGTTCAGGAAAAGTGAGACTTGGCTTGCTTaGTTCTTTACCGTCAGAACAGGCTGTGAAGGACAGAGTAGTGAA | + |
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Preference number: 2 (lower is better) Translates to: QLPLFLFRKSETWLA*FFTVRTGCEGQSSE Trigger: TTCACTACTCTGTCCTTCACAGCCTGTTCTGACGGTAAAGAACAAAGCAAGCCAAGTCTCACTTTTCCTGAACAGAAAAAGAGGGAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR-3UTR TCA 90 bp | GTTCCTATTGCTTCCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCTGTGTTTGGTCCTTTTGTTaGAAATGGCTCCGGAGCGTG | + |
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Preference number: 2 (lower is better) Translates to: VPIASSDSLIETSAGRSCVWSFC*KWLRSV Trigger: CACGCTCCGGAGCCATTTTCAACAAAAGGACCAAAC...ACAGGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGGAAGCAATAGGAAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR CAA 90 bp | TATTACAGCTCCCTCTTTTTCTGTTCAGGAAAAGTGAGACTTGGCTaGCTTTGTTCTTTACCGTCAGAACAGGCTGTGAAGGACAGAGTA | + |
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Preference number: 2 (lower is better) Translates to: YYSSLFFCSGKVRLG*LCSLPSEQAVKDRV Trigger: TACTCTGTCCTTCACAGCCTGTTCTGACGGTAAAGAACAAAGCAAGCCAAGTCTCACTTTTCCTGAACAGAAAAAGAGGGAGCTGTAATA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR-3UTR TCA 90 bp | TCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATGAAACAGGATTCGCTCGCCTTCCTTTaGAATAGCTTCGCAGCAGGT | + |
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Preference number: 2 (lower is better) Translates to: SKCLSTNSYLDLKTMKQDSLAFL*NSFAAG Trigger: ACCTGCTGCGAAGCTATTTCAAAGGAAGGCGAGCGA...ATCCTGTTTCATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR-3UTR TCA 90 bp | GTACAACTAGGGTCCCATTTTCTGCTCTCCTGGAAGCCCATGTATGTGAAAGATTCGAAAGGCAAAAATTaGATGCAAGAAGCGCTTTTC | + |
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Preference number: 2 (lower is better) Translates to: VQLGSHFLLSWKPMYVKDSKGKN*MQEALF Trigger: GAAAAGCGCTTCTTGCATTCAATTTTTGCCTTTCGA...ATCTTTCACATACATGGGCTTCCAGGAGAGCAGAAAATGGGACCCTAGTTGTAC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGGAGGAAGAAGATCAAGCCTATACTTAAAGTTCAGTTCCTATTGCTTCCTCAACAATGAAACAGGATaGTGCTTCTGGTACCCACAC | + |
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Preference number: 2 (lower is better) Translates to: LGGRRSSLYLKFSSYCFLNNETG*CFWYPH Trigger: GTGTGGGTACCAGAAGCAGCATCCTGTTTCATTGTT...GAGGAAGCAATAGGAACTGAACTTTAAGTATAGGCTTGATCTTCTTCCTCCCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| 3UTR-3UTR TCA 90 bp | CCACAAATTTTGCTTAATATACAACAAAACGGCTGGATGCATAGAATTTCTGCACTCCCACCACAGGGGTaGGGAGATGGAAATTTGACT | + |
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Preference number: 2 (lower is better) Translates to: PQILLNIQQNGWMHRISALPPQG*GDGNLT Trigger: AGTCAAATTTCCATCTCCTCACCCCTGTGGTGGGAG...TGCAGAAATTCTATGCATCCAGCCGTTTTGTTGTATATTAAGCAAAATTTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR CAA 90 bp | ACTGGGAGGAAGAAGATCAAGCCTATACTTAAAGTTCAGTTCCTATaGCTTCCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCT | + |
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Preference number: 2 (lower is better) Translates to: TGRKKIKPILKVQFL*LPQILLLKLQQADP Trigger: AGGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGGAAGCAATAGGAACTGAACTTTAAGTATAGGCTTGATCTTCTTCCTCCCAGT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| 3UTR CAA 90 bp | GCTTTTCACAGGGATCCCTTGAAGAAAGGTTGCCAGCCACAAATTTaGCTTAATATACAACAAAACGGCTGGATGCATAGAATTTCTGCA | + |
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Preference number: 2 (lower is better) Translates to: AFHRDPLKKGCQPQI*LNIQQNGWMHRISA Trigger: TGCAGAAATTCTATGCATCCAGCCGTTTTGTTGTATATTAAGCAAAATTTGTGGCTGGCAACCTTTCTTCAAGGGATCCCTGTGAAAAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR-3UTR TCA 90 bp | CAACAAAACGGCTGGATGCATAGAATTTCTGCACTTAGCAAGGCTGCTGTCATTGTCCAGAAAGCACAATaGCTATTTGATTTTCTGCTT | + |
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Preference number: 2 (lower is better) Translates to: QQNGWMHRISALSKAAVIVQKAQ*LFDFLL Trigger: AAGCAGAAAATCAAATAGTCATTGTGCTTTCTGGAC...AATGACAGCAGCCTTGCTAAGTGCAGAAATTCTATGCATCCAGCCGTTTTGTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR-3UTR GCA 90 bp | CTGGTTTACATTTGGCCCATTTCCCATCTGCATTACCTTCAAACTGTTTTGCTGTGGATTTTGTTACAATaGCCAGATGAATCATTGCAC | + |
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Preference number: 2 (lower is better) Translates to: LVYIWPISHLHYLQTVLLWILLQ*PDESLH Trigger: GTGCAATGATTCATCTGGGCATTGTAACAAAATCCA...CAGCAAAACAGTTTGAAGGTAATGCAGATGGGAAATGGGCCAAATGTAAACCAG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR CCA 72 bp | CGCACACGGAACCGGGGCCCTGGAAGCCTCGGCTCCTaGGATGCTCACAGTGATGACCCCATGACTGGTGGG | + |
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Preference number: 3 (lower is better) Translates to: RTRNRGPGSLGS*DAHSDDPMTGG Trigger: CCCACCAGTCATGGGGTCATCACTGTGAGCATCCCAGGAGCCGAGGCTTCCAGGGCCCCGGTTCCGTGTGCG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR TCA 72 bp | CCTGCTCCCTCCTCCCTTGTGTCCACTGAAGTTGTCTaGTGTGCCAGGTGTTCTCAGCCAGCCCAAGTGTCT | + |
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Preference number: 3 (lower is better) Translates to: PAPSSLVSTEVV*CARCSQPAQVS Trigger: AGACACTTGGGCTGGCTGAGAACACCTGGCACATCAGACAACTTCAGTGGACACAAGGGAGGAGGGAGCAGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR GCA 72 bp | CCGGAGCTCAGAACCTGTAGCTCAGACACACTCTCCTaGAGCAGGCTGGAGAGCTCACCTTCCCGAAATACA | + |
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Preference number: 3 (lower is better) Translates to: PELRTCSSDTLS*SRLESSPSRNT Trigger: TGTATTTCGGGAAGGTGAGCTCTCCAGCCTGCTGCAGGAGAGTGTGTCTGAGCTACAGGTTCTGAGCTCCGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR TCA 72 bp | GGATCCAGCAGGAGGGCATGTAGGACACCCTGGTTCTaGACTCAGACTGGATCCAGACCATCTAGGACTGAA | + |
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Preference number: 3 (lower is better) Translates to: GSSRRACRTPWF*TQTGSRPSRTE Trigger: TTCAGTCCTAGATGGTCTGGATCCAGTCTGAGTTCAGAACCAGGGTGTCCTACATGCCCTCCTGCTGGATCC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR TCA 72 bp | ATTGCTATACAATCCGTTCTCTCGCTCGCCTTCCTTTaGAATAGCTTCGCAGCAGGTTCTGGCCACCGCAGA | + |
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Preference number: 3 (lower is better) Translates to: IAIQSVLSLAFL*NSFAAGSGHRR Trigger: TCTGCGGTGGCCAGAACCTGCTGCGAAGCTATTTCAAAGGAAGGCGAGCGAGAGAACGGATTGTATAGCAAT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR CCA 72 bp | AGGCTGTTGGGACACGGTGCTATTGGCCCAAGCCTCTaGGATTTTCATGGGCCTGACTCTTTCAATTTGCTT | + |
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Preference number: 3 (lower is better) Translates to: RLLGHGAIGPSL*DFHGPDSFNLL Trigger: AAGCAAATTGAAAGAGTCAGGCCCATGAAAATCCCAGAGGCTTGGGCCAATAGCACCGTGTCCCAACAGCCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR TCA 72 bp | AGAGCTCACCTTCCCGAAATACATGGTAGTAACGCATaGAGGCTTTGGAATCGGTGGCATCCCGTTGTGCTT | + |
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Preference number: 3 (lower is better) Translates to: RAHLPEIHGSNA*RLWNRWHPVVL Trigger: AAGCACAACGGGATGCCACCGATTCCAAAGCCTTCATGCGTTACTACCATGTATTTCGGGAAGGTGAGCTCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR TCA 72 bp | CCGGACATGGGCACTAGGAACCAATTTCAGGTCCTCTaGAGGAACAGTAGGCACTCTAAAATCAGTAAGCCA | + |
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Preference number: 3 (lower is better) Translates to: PDMGTRNQFQVL*RNSRHSKISKP Trigger: TGGCTTACTGATTTTAGAGTGCCTACTGTTCCTTCAGAGGACCTGAAATTGGTTCCTAGTGCCCATGTCCGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR CCA 72 bp | CCCGTTGTGCTTCCAAAAAGCTTGAGTCTTCTGAGTTaGAGTCGTTGGAGTCGAATGCAGAAACCCTCCTTA | + |
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Preference number: 3 (lower is better) Translates to: PVVLPKSLSLLS*SRWSRMQKPSL Trigger: TAAGGAGGGTTTCTGCATTCGACTCCAACGACTCCAACTCAGAAGACTCAAGCTTTTTGGAAGCACAACGGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR CCA 72 bp | GACATGCCTACCACTCCCACCACAGGGGTGAGGAGATaGAAATTTGACTTGAAGAACTTCAGGAGCTATACA | + |
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Preference number: 3 (lower is better) Translates to: DMPTTPTTGVRR*KFDLKNFRSYT Trigger: TGTATAGCTCCTGAAGTTCTTCAAGTCAAATTTCCATCTCCTCACCCCTGTGGTGGGAGTGGTAGGCATGTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR-3UTR CAA 90 bp | AAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATGAAACAGGATGCTGTGTCTGGAAGGCTGTaGGGACACGGTGCTATTGGC | + |
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Preference number: 3 (lower is better) Translates to: KCLSTNSYLDLKTMKQDAVSGRL*GHGAIG Trigger: GCCAATAGCACCGTGTCCCAACAGCCTTCCAGACAC...AGCATCCTGTTTCATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR TCA 72 bp | TGCTATTGGCCCAAGCCTCTGGGATTTTCATGGGCCTaGCTCTTTCAATTTGCTTCCTCAGGGTTGATTCAT | + |
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Preference number: 3 (lower is better) Translates to: CYWPKPLGFSWA*LFQFASSGLIH Trigger: ATGAATCAACCCTGAGGAAGCAAATTGAAAGAGTCAGGCCCATGAAAATCCCAGAGGCTTGGGCCAATAGCA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR-3UTR CAA 90 bp | GTTCCTATTGCTTCCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCTGTACAGAACAGGTGTCCTaGTTCCTTCCACAGAGGTCT | + |
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Preference number: 3 (lower is better) Translates to: VPIASSDSLIETSAGRSCTEQVS*FLPQRS Trigger: AGACCTCTGTGGAAGGAACAAGGACACCTGTTCTGT...ACAGGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGGAAGCAATAGGAAC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR-3UTR CAA 90 bp | TGGGGATGTAAGGCAAGAGGGAAGGATCAAATCTGTGTGACAACCAACGTGTGTGTATGCATTTATGACTaGGGTTTCCTTCTGAGGACA | + |
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Preference number: 3 (lower is better) Translates to: WGCKARGKDQICVTTNVCVCIYD*GFLLRT Trigger: TGTCCTCAGAAGGAAACCCAAGTCATAAATGCATAC...ACACACGTTGGTTGTCACACAGATTTGATCCTTCCCTCTTGCCTTACATCCCCA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR CCA 72 bp | CAGCTCCCTCTTTTTCTGTTCAGGAAAAGTGAGACTTaGCTTGCTTTGTTCTTTACCGTCAGAACAGGCTGT | + |
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Preference number: 3 (lower is better) Translates to: QLPLFLFRKSET*LALFFTVRTGC Trigger: ACAGCCTGTTCTGACGGTAAAGAACAAAGCAAGCCAAGTCTCACTTTTCCTGAACAGAAAAAGAGGGAGCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR-3UTR CAA 90 bp | CTGGGAGGAAGAAGATCAAGCCTATACTTAAAGTTCAGTTCCTATTGCTTCCTCCTTGAGTCTTCTGAGTaGGAGTCGTTGGAGTCGAAT | + |
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Preference number: 3 (lower is better) Translates to: LGGRRSSLYLKFSSYCFLLESSE*ESLESN Trigger: ATTCGACTCCAACGACTCCAACTCAGAAGACTCAAG...GAGGAAGCAATAGGAACTGAACTTTAAGTATAGGCTTGATCTTCTTCCTCCCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| 3UTR GCA 72 bp | CTTATTGAAACTTCAGCAGGCAGATCCTGTAGCAGATaGAGTACGTGTCAGACTTCGTGCTTACTCAACAAT | + |
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Preference number: 3 (lower is better) Translates to: LIETSAGRSCSR*STCQTSCLLNN Trigger: ATTGTTGAGTAAGCACGAAGTCTGACACGTACTGCATCTGCTACAGGATCTGCCTGCTGAAGTTTCAATAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| 3UTR CCA 72 bp | CCGGGCCTAGTCTCTTGTTCCTTCATAATTGTTCCTTaGGATCCACAACATAGAATTAATCACAGTCGTGGT | + |
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Preference number: 3 (lower is better) Translates to: PGLVSCSFIIVP*DPQHRINHSRG Trigger: ACCACGACTGTGATTAATTCTATGTTGTGGATCCCAAGGAACAATTATGAAGGAACAAGAGACTAGGCCCGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| 3UTR-3UTR CAA 90 bp | CCTTCAAACTGTTTTGCTGAGTCAGTTGAAGGTCAGTTGAACACACAGGAATCTTCCCTTGAAGAAAGGTaGCCAGCCACAAATTTTGCT | + |
|
Preference number: 3 (lower is better) Translates to: PSNCFAESVEGQLNTQESSLEER*PATNFA Trigger: AGCAAAATTTGTGGCTGGCAACCTTTCTTCAAGGGA...AGATTCCTGTGTGTTCAACTGACCTTCAACTGACTCAGCAAAACAGTTTGAAGG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR TCA 72 bp | CTTCAAACTGTTTTGCTGAGTCAGTTGAAGGTCAGTTaGACACACAGGAATCTTTGGCCTCTAGAATCAGGA | + |
|
Preference number: 3 (lower is better) Translates to: LQTVLLSQLKVS*THRNLWPLESG Trigger: TCCTGATTCTAGAGGCCAAAGATTCCTGTGTGTTCAACTGACCTTCAACTGACTCAGCAAAACAGTTTGAAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR TCA 72 bp | TTTTTAAATTCTATCTGTGGTACTGTGGATATATGCTaGTTCTGCGGCATTCGAGCTGGCTGCTCTAACACT | + |
|
Preference number: 3 (lower is better) Translates to: FLNSICGTVDIC*FCGIRAGCSNT Trigger: AGTGTTAGAGCAGCCAGCTCGAATGCCGCAGAATCAGCATATATCCACAGTACCACAGATAGAATTTAAAAA 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR GCA 72 bp | GTTCTCAGCTCTGTCAATGCTGTACGAAAATTTCTCTaGCTCCCAATAAGCATTCCAAAGGGCTTTAAATAC | + |
|
Preference number: 3 (lower is better) Translates to: VLSSVNAVRKFL*LPISIPKGFKY Trigger: GTATTTAAAGCCCTTTGGAATGCTTATTGGGAGGCAGAGAAATTTTCGTACAGCATTGACAGAGCTGAGAAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR CCA 72 bp | CTTCCAAAAAGCTTGAGTCTTCTGAGTTGGAGTCGTTaGAGTCGAATGCAGAAACCCTCCTTAATATTTTTC | + |
|
Preference number: 3 (lower is better) Translates to: LPKSLSLLSWSR*SRMQKPSLIFF Trigger: GAAAAATATTAAGGAGGGTTTCTGCATTCGACTCCAACGACTCCAACTCAGAAGACTCAAGCTTTTTGGAAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
||
| 3UTR-3UTR CAA 90 bp | CTGGTTTACATTTGGCCCATTTCCCATCTGCATTACCTTCAAACTGTTTTGCTGAAACTCACCAGTCACTaGCCCACAAGGAAAATATTA | + |
|
Preference number: 3 (lower is better) Translates to: LVYIWPISHLHYLQTVLLKLTSH*PTRKIL Trigger: TAATATTTTCCTTGTGGGCAAGTGACTGGTGAGTTT...CAGCAAAACAGTTTGAAGGTAATGCAGATGGGAAATGGGCCAAATGTAAACCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR TCA 72 bp | CAACCTGTGACTAAGCTTCGATTCTGTCCAGATTGTTaGTATAACGATCTAATGCAGTTACCTTCAAGGGAA | + |
|
Preference number: 3 (lower is better) Translates to: QPVTKLRFCPDC*YNDLMQLPSRE Trigger: TTCCCTTGAAGGTAACTGCATTAGATCGTTATATCAACAATCTGGACAGAATCGAAGCTTAGTCACAGGTTG 40% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR CCA 72 bp | CAGCCACAAATTTTGCTTAATATACAACAAAACGGCTaGATGCATAGAATTTCTGCACTTAGCAAGGCTGCT | + |
|
Preference number: 3 (lower is better) Translates to: QPQILLNIQQNG*MHRISALSKAA Trigger: AGCAGCCTTGCTAAGTGCAGAAATTCTATGCATCCAGCCGTTTTGTTGTATATTAAGCAAAATTTGTGGCTG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR-3UTR CAA 90 bp | AAGAAGATCAAGCCTATACTTAAAGTTCAGTTCCTATTGCTTCCTCAGATTCTCTGCCCAGATGAATCATaGCACTATAGACTAGCAGAA | + |
|
Preference number: 3 (lower is better) Translates to: KKIKPILKVQFLLLPQILCPDES*HYRLAE Trigger: TTCTGCTAGTCTATAGTGCAATGATTCATCTGGGCA...GAGAATCTGAGGAAGCAATAGGAACTGAACTTTAAGTATAGGCTTGATCTTCTT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR-3UTR CAA 90 bp | CCACAAATTTTGCTTAATATACAACAAAACGGCTGGATGCATAGAATTTCTGCACCTCAGATTCTCTTATaGAAACTTCAGCAGGCAGAT | + |
|
Preference number: 3 (lower is better) Translates to: PQILLNIQQNGWMHRISAPQILL*KLQQAD Trigger: ATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGG...TGCAGAAATTCTATGCATCCAGCCGTTTTGTTGTATATTAAGCAAAATTTGTGG 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR-3UTR CAA 90 bp | TGGTCCAGAAAGCACAATGACTATTTGATTTTCTGCTTGTTAACGAATTATCTGATGCTCCTAATACCTTaGGAGAAAATGTCACCAGAG | + |
|
Preference number: 3 (lower is better) Translates to: WSRKHNDYLIFCLLTNYLMLLIP*EKMSPE Trigger: CTCTGGTGACATTTTCTCCAAAGGTATTAGGAGCAT...CAGATAATTCGTTAACAAGCAGAAAATCAAATAGTCATTGTGCTTTCTGGACCA 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR GCA 72 bp | ACTAATTCAGAGTCACCATTTCTCCCAGGAAGCCACTaGACATACAGTTTAATATTTTCACTTGGAAAAGTA | + |
|
Preference number: 3 (lower is better) Translates to: TNSESPFLPGSH*TYSLIFSLGKV Trigger: TACTTTTCCAAGTGAAAATATTAAACTGTATGTGCAGTGGCTTCCTGGGAGAAATGGTGACTCTGAATTAGT 38% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR-3UTR CAA 90 bp | CCACAAATTTTGCTTAATATACAACAAAACGGCTGGATGCATAGAATTTCTGCACTAGTTGAAAACTCTTaGGGTAATTTTGGCACAACC | + |
|
Preference number: 3 (lower is better) Translates to: PQILLNIQQNGWMHRISALVENS*GNFGTT Trigger: GGTTGTGCCAAAATTACCCAAAGAGTTTTCAACTAG...TGCAGAAATTCTATGCATCCAGCCGTTTTGTTGTATATTAAGCAAAATTTGTGG 37% GC, longest homopolymer 4 nt, total homopolymer stretches 16 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR GCA 72 bp | TATTGGTCCAGAAAGCACAATGACTATTTGATTTTCTaGTTGTTAACGAATTATCTGGAACCATATTCCGTG | + |
|
Preference number: 3 (lower is better) Translates to: YWSRKHNDYLIF*LLTNYLEPYSV Trigger: CACGGAATATGGTTCCAGATAATTCGTTAACAAGCAGAAAATCAAATAGTCATTGTGCTTTCTGGACCAATA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR CAA 72 bp | CTGGGGTGTCTGGAAGGCTGTTGGGACACGGTGCTATaGGCCCAAGCCTCTGGGATTTTCATGGGCCTGACT | + |
|
Preference number: 4 (lower is better) Translates to: LGCLEGCWDTVL*AQASGIFMGLT Trigger: AGTCAGGCCCATGAAAATCCCAGAGGCTTGGGCCAATAGCACCGTGTCCCAACAGCCTTCCAGACACCCCAG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
||
| CDS-3UTR TCA 90 bp | GACACATTTGTGCAGTGGCCAGAAGAGGGTATTGAACCCCTTGGAGCCAGAGGTTGCTCTGCAGGTCAGTaGAGTAGGGGGCAGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: DTFVQWPEEGIEPLGARGCSAGQ*SRGQCS Trigger: AGAACACTGCCCCCTACTTCACTGACCTGCAGAGCA...ACCTCTGGCTCCAAGGGGTTCAATACCCTCTTCTGGCCACTGCACAAATGTGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000152039.9 |
||
| CDS-3UTR CCA 90 bp | GATTCTCTTATTGAAACTTCAGCAGGCAGATCCTGTAGCAGATGCAGTACGTGTACGGAACCGGGGCCCTaGAAGCCTCGGCTCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: DSLIETSAGRSCSRCSTCTEPGP*KPRLLG Trigger: TCCCAGGAGCCGAGGCTTCCAGGGCCCCGGTTCCGT...ACACGTACTGCATCTGCTACAGGATCTGCCTGCTGAAGTTTCAATAAGAGAATC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR GCA 90 bp | CGTTGTGCTTCCAAAAAGCTTGAGTCTTCTGAGTTGGAGTCGTTGGAGTCGAATCCTGGCTTCTGGTCCTaGAGGAACTGGCGGACACGC | + |
|
Preference number: 4 (lower is better) Translates to: RCASKKLESSELESLESNPGFWS*RNWRTR Trigger: GCGTGTCCGCCAGTTCCTGCAGGACCAGAAGCCAGG...ATTCGACTCCAACGACTCCAACTCAGAAGACTCAAGCTTTTTGGAAGCACAACG 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
||
| CDS-3UTR CCA 90 bp | ATGATGTATGACACATTTGTGCAGTGGCCAGAAGAGGGTATTGAACCCCTTGGAAGGCTGCCTGGCTTCTaGTCCTGCAGGAACTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: MMYDTFVQWPEEGIEPLGRLPGF*SCRNWR Trigger: CCGCCAGTTCCTGCAGGACCAGAAGCCAGGCAGCCT...TCCAAGGGGTTCAATACCCTCTTCTGGCCACTGCACAAATGTGTCATACATCAT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152039.9 |
||
| CDS-3UTR CCA 90 bp | AGCTTGAGTCTTCTGAGTTGGAGTCGTTGGAGTCGAATGCAGAAACCCTCCTTAAGCGACGAGGCTGCCTaGCTTCTGGTCCTGCAGGAA | + |
|
Preference number: 4 (lower is better) Translates to: SLSLLSWSRWSRMQKPSLSDEAA*LLVLQE Trigger: TTCCTGCAGGACCAGAAGCCAGGCAGCCTCGTCGCT...TAAGGAGGGTTTCTGCATTCGACTCCAACGACTCCAACTCAGAAGACTCAAGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
||
| CDS-3UTR TCA 90 bp | TTACCATGGTCATTGCCGGAGCTCAGAACCTGTAGCTCAGACACACTCTCCTGCCTTCAGGCTGCCTCCTaGTATAGCTCCTATGGAGAT | + |
|
Preference number: 4 (lower is better) Translates to: LPWSLPELRTCSSDTLSCLQAAS*YSSYGD Trigger: ATCTCCATAGGAGCTATATCAGGAGGCAGCCTGAAG...GCAGGAGAGTGTGTCTGAGCTACAGGTTCTGAGCTCCGGCAATGACCATGGTAA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
||
| CDS-3UTR CCA 90 bp | TTGGAATCACATCTGCCCTTAAAACACACTGCGCAGCCGCACACGGAACCGGGGATAGCATCGAAGCCCTaGTCCCTAAAGGGAAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: LESHLPLKHTAQPHTEPGIASKP*SLKGRL Trigger: TAATCTTCCCTTTAGGGACCAGGGCTTCGATGCTAT...CCCCGGTTCCGTGTGCGGCTGCGCAGTGTGTTTTAAGGGCAGATGTGATTCCAA 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
||
| CDS-3UTR CCA 90 bp | ATTGAAACTTCAGCAGGCAGATCCTGTAGCAGATGCAGTACGTGTCAGACTTCGGGAAGCCTCGGCTCCTaGGATGCTCACAGTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: IETSAGRSCSRCSTCQTSGSLGS*DAHSDD Trigger: GTCATCACTGTGAGCATCCCAGGAGCCGAGGCTTCC...CGAAGTCTGACACGTACTGCATCTGCTACAGGATCTGCCTGCTGAAGTTTCAAT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR CCA 90 bp | AAGATGCGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATGACGGAACCGGGGCCCTaGAAGCCTCGGCTCCTGGGA | + |
|
Preference number: 4 (lower is better) Translates to: KMRSKCLSTNSYLDLKTMTEPGP*KPRLLG Trigger: TCCCAGGAGCCGAGGCTTCCAGGGCCCCGGTTCCGT...CATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCGCATCTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTTCCTATTGCTTCCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCAGGCTGCCTGGCTTCTaGTCCTGCAGGAACTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: SVPIASSDSLIETSAGRSRLPGF*SCRNWR Trigger: CCGCCAGTTCCTGCAGGACCAGAAGCCAGGCAGCCT...GGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGGAAGCAATAGGAACTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTCCTATTGCTTCCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCTAGGCTGCCTGGCTTCTaGTCCTGCAGGAACTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: QFLLLPQILLLKLQQADPRLPGF*SCRNWR Trigger: CCGCCAGTTCCTGCAGGACCAGAAGCCAGGCAGCCT...AGGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGGAAGCAATAGGAACTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR GCA 90 bp | TCTGCAATGATGCACCAGTTACCATGGTCATTGCCGGAGCTCAGAACCTGTAGCTTCTCGTACACACTGTaGACATGTCGCTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SAMMHQLPWSLPELRTCSFSYTL*TCRFSS Trigger: ACTGGAGAAGCGACATGTGCACAGTGTGTACGAGAA...GCTACAGGTTCTGAGCTCCGGCAATGACCATGGTAACTGGTGCATCATTGCAGA 50% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
||
| 3UTR CAA 72 bp | TGGAATCGGTGGCATCCCGTTGTGCTTCCAAAAAGCTaGAGTCTTCTGAGTTGGAGTCGTTGGAGTCGAATG | + |
|
Preference number: 4 (lower is better) Translates to: WNRWHPVVLPKS*SLLSWSRWSRM Trigger: CATTCGACTCCAACGACTCCAACTCAGAAGACTCAAGCTTTTTGGAAGCACAACGGGATGCCACCGATTCCA 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
||
| 3UTR CAA 72 bp | TGTATGACACATTTGTGCAGTGGCCAGAAGAGGGTATaGAACCCCTTGGAGCCAGAGGTACAGACAGTTGTG | + |
|
Preference number: 4 (lower is better) Translates to: CMTHLCSGQKRV*NPLEPEVQTVV Trigger: CACAACTGTCTGTACCTCTGGCTCCAAGGGGTTCAATACCCTCTTCTGGCCACTGCACAAATGTGTCATACA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152039.9 |
||
| CDS-3UTR TCA 90 bp | GTACAACTAGGGTCCCATTTTCTGCTCTCCTGGAAGCCCATGTATGTGAAAGATTCGCTCGCCTTCCTTTaGAATAGCTTCGCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: VQLGSHFLLSWKPMYVKDSLAFL*NSFAAG Trigger: ACCTGCTGCGAAGCTATTTCAAAGGAAGGCGAGCGA...ATCTTTCACATACATGGGCTTCCAGGAGAGCAGAAAATGGGACCCTAGTTGTAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| CDS-3UTR CCA 90 bp | CCCTCTGCTAACAGCGCCTTTAAGAAGCTTCAGAGCAACACTGAAGACAGTATTATTGGCCCAAGCCTCTaGGATTTTCATGGGCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: PSANSAFKKLQSNTEDSIIGPSL*DFHGPD Trigger: GTCAGGCCCATGAAAATCCCAGAGGCTTGGGCCAAT...AATACTGTCTTCAGTGTTGCTCTGAAGCTTCTTAAAGGCGCTGTTAGCAGAGGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| CDS-3UTR CCA 90 bp | CTCCTAATACCTTTGGAGAAAATGTCACCAGAGGACAGAACATCTCCTACCCATTGTCTGGAAGGCTGTTaGGACACGGTGCTATTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: LLIPLEKMSPEDRTSPTHCLEGC*DTVLLA Trigger: GGCCAATAGCACCGTGTCCCAACAGCCTTCCAGACA...ATGGGTAGGAGATGTTCTGTCCTCTGGTGACATTTTCTCCAAAGGTATTAGGAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR CAA 72 bp | TCCCGTTGTGCTTCCAAAAAGCTTGAGTCTTCTGAGTaGGAGTCGTTGGAGTCGAATGCAGAAACCCTCCTT | + |
|
Preference number: 4 (lower is better) Translates to: SRCASKKLESSE*ESLESNAETLL Trigger: AAGGAGGGTTTCTGCATTCGACTCCAACGACTCCAACTCAGAAGACTCAAGCTTTTTGGAAGCACAACGGGA 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
||
| CDS-3UTR TCA 90 bp | GTTCCTATTGCTTCCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCTGTTGCTCTGCAGGTCAGTaGAGTAGGGGGCAGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: VPIASSDSLIETSAGRSCCSAGQ*SRGQCS Trigger: AGAACACTGCCCCCTACTTCACTGACCTGCAGAGCA...ACAGGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGGAAGCAATAGGAAC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR TCA 90 bp | ATTTGGCCCATTTCCCATCTGCATTACCTTCAAACTGTTTTGCTGAGTCAGTTGTGCTCTGCAGGTCAGTaGAGTAGGGGGCAGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: IWPISHLHYLQTVLLSQLCSAGQ*SRGQCS Trigger: AGAACACTGCCCCCTACTTCACTGACCTGCAGAGCA...CAACTGACTCAGCAAAACAGTTTGAAGGTAATGCAGATGGGAAATGGGCCAAAT 48% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| CDS-3UTR TCA 90 bp | GATTCTCTTATTGAAACTTCAGCAGGCAGATCCTGTAGCAGATGCAGTACGTGTTCGCTCGCCTTCCTTTaGAATAGCTTCGCAGCAGGT | + |
|
Preference number: 4 (lower is better) Translates to: DSLIETSAGRSCSRCSTCSLAFL*NSFAAG Trigger: ACCTGCTGCGAAGCTATTTCAAAGGAAGGCGAGCGA...ACACGTACTGCATCTGCTACAGGATCTGCCTGCTGAAGTTTCAATAAGAGAATC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR GCA 90 bp | TCAACAATTAGGAAGATGCGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTCAGACACACTCTCCTaGAGCAGGCTGGAGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: STIRKMRSKCLSTNSYLDSDTLS*SRLESS Trigger: TGAGCTCTCCAGCCTGCTGCAGGAGAGTGTGTCTGA...ATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCGCATCTTCCTAATTGTTGA 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTCCTATTGCTTCCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCTTGTCTGGAAGGCTGTTaGGACACGGTGCTATTGGCC | + |
|
Preference number: 4 (lower is better) Translates to: QFLLLPQILLLKLQQADPCLEGC*DTVLLA Trigger: GGCCAATAGCACCGTGTCCCAACAGCCTTCCAGACA...AGGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGGAAGCAATAGGAACTG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR TCA 90 bp | AAGATGCGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATGTGCTCTGCAGGTCAGTaGAGTAGGGGGCAGTGTTCT | + |
|
Preference number: 4 (lower is better) Translates to: KMRSKCLSTNSYLDLKTMCSAGQ*SRGQCS Trigger: AGAACACTGCCCCCTACTTCACTGACCTGCAGAGCA...CATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCGCATCTT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR TCA 90 bp | GATTCTCTTATTGAAACTTCAGCAGGCAGATCCTGTAGCAGATGCAGTACGTGTGTTTGGTCCTTTTGTTaGAAATGGCTCCGGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: DSLIETSAGRSCSRCSTCVWSFC*KWLRSV Trigger: CACGCTCCGGAGCCATTTTCAACAAAAGGACCAAAC...ACACGTACTGCATCTGCTACAGGATCTGCCTGCTGAAGTTTCAATAAGAGAATC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR GCA 90 bp | ATGATGTATGACACATTTGTGCAGTGGCCAGAAGAGGGTATTGAACCCCTTGGATTCTCGTACACACTGTaGACATGTCGCTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: MMYDTFVQWPEEGIEPLGFSYTL*TCRFSS Trigger: ACTGGAGAAGCGACATGTGCACAGTGTGTACGAGAA...TCCAAGGGGTTCAATACCCTCTTCTGGCCACTGCACAAATGTGTCATACATCAT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152039.9 |
||
| CDS-3UTR CCA 90 bp | TTTCTGCTTGTTAACGAATTATCTGGAACCATATTCCGTGGCCAACTTATTTTTAGGCTGCCTGGCTTCTaGTCCTGCAGGAACTGGCGG | + |
|
Preference number: 4 (lower is better) Translates to: FLLVNELSGTIFRGQLIFRLPGF*SCRNWR Trigger: CCGCCAGTTCCTGCAGGACCAGAAGCCAGGCAGCCT...AAAAATAAGTTGGCCACGGAATATGGTTCCAGATAATTCGTTAACAAGCAGAAA 47% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| CDS-3UTR CCA 90 bp | TATGACACATTTGTGCAGTGGCCAGAAGAGGGTATTGAACCCCTTGGAGCCAGATCACAGCCCAGAGTATaGACTTGGCTATTCACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: YDTFVQWPEEGIEPLGARSQPRV*TWLFTL Trigger: TAAAGTGAATAGCCAAGTCCATACTCTGGGCTGTGA...TCTGGCTCCAAGGGGTTCAATACCCTCTTCTGGCCACTGCACAAATGTGTCATA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152039.9 |
||
| CDS-3UTR CCA 90 bp | GTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATGAAACAGGAGGAAGCCTCGGCTCCTaGGATGCTCACAGTGATGAC | + |
|
Preference number: 4 (lower is better) Translates to: VKVLKYQLVPGFENNETGGSLGS*DAHSDD Trigger: GTCATCACTGTGAGCATCCCAGGAGCCGAGGCTTCC...TCCTGTTTCATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR CCA 90 bp | CAGTTCCTATTGCTTCCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCTATTGGCCCAAGCCTCTaGGATTTTCATGGGCCTGAC | + |
|
Preference number: 4 (lower is better) Translates to: QFLLLPQILLLKLQQADPIGPSL*DFHGPD Trigger: GTCAGGCCCATGAAAATCCCAGAGGCTTGGGCCAAT...AGGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGGAAGCAATAGGAACTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR GCA 90 bp | CCTTCAAACTGTTTTGCTGAGTCAGTTGAAGGTCAGTTGAACACACAGGAATCTCAGACCCATAGTCCATaGTGTGGGACCGTTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: PSNCFAESVEGQLNTQESQTHSP*CGTVWN Trigger: ATTCCAAACGGTCCCACAGCATGGACTATGGGTCTG...AGATTCCTGTGTGTTCAACTGACCTTCAACTGACTCAGCAAAACAGTTTGAAGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| CDS-3UTR GCA 90 bp | CTGGGAGGAAGAAGATCAAGCCTATACTTAAAGTTCAGTTCCTATTGCTTCCTCCAGACCCATAGTCCATaGTGTGGGACCGTTTGGAAT | + |
|
Preference number: 4 (lower is better) Translates to: LGGRRSSLYLKFSSYCFLQTHSP*CGTVWN Trigger: ATTCCAAACGGTCCCACAGCATGGACTATGGGTCTG...GAGGAAGCAATAGGAACTGAACTTTAAGTATAGGCTTGATCTTCTTCCTCCCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR CCA 90 bp | TCAGTTCCTATTGCTTCCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCATGCACCAGTTACCATaGTCATTGCCGGAGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: SVPIASSDSLIETSAGRSMHQLP*SLPELR Trigger: TCTGAGCTCCGGCAATGACCATGGTAACTGGTGCAT...GGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGGAAGCAATAGGAACTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| 3UTR CAA 72 bp | GGTCGCACACTGTCTCCATTTGTATGCATTTATGACTaGGGTTTCCTTCTGAGGACAGTCCTAAAGAAGAGC | + |
|
Preference number: 4 (lower is better) Translates to: GRTLSPFVCIYD*GFLLRTVLKKS Trigger: GCTCTTCTTTAGGACTGTCCTCAGAAGGAAACCCAAGTCATAAATGCATACAAATGGAGACAGTGTGCGACC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| CDS-3UTR CCA 90 bp | ATTGAAACTTCAGCAGGCAGATCCTGTAGCAGATGCAGTACGTGTCAGACTTCGCCCAGAGTATGGACTTaGCTATTCACTTTAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: IETSAGRSCSRCSTCQTSPRVWT*LFTLRY Trigger: GTATCTTAAAGTGAATAGCCAAGTCCATACTCTGGG...CGAAGTCTGACACGTACTGCATCTGCTACAGGATCTGCCTGCTGAAGTTTCAAT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR CCA 90 bp | AAGATGCGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATGATGCACCAGTTACCATaGTCATTGCCGGAGCTCAGA | + |
|
Preference number: 4 (lower is better) Translates to: KMRSKCLSTNSYLDLKTMMHQLP*SLPELR Trigger: TCTGAGCTCCGGCAATGACCATGGTAACTGGTGCAT...CATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCGCATCTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| 3UTR CAA 72 bp | CGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTaGAAAACAATGAAACAGGATGCTGCTTCTGGTACC | + |
|
Preference number: 4 (lower is better) Translates to: RSKCLSTNSYLD*KTMKQDAASGT Trigger: GGTACCAGAAGCAGCATCCTGTTTCATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| 3UTR CAA 72 bp | GGCCAACTTATTTTTGTTTCTCCCGGGCCTAGTCTCTaGTTCCTTCATAATTGTTCCTTGGGATCCACAACA | + |
|
Preference number: 4 (lower is better) Translates to: GQLIFVSPGPSL*FLHNCSLGSTT Trigger: TGTTGTGGATCCCAAGGAACAATTATGAAGGAACAAGAGACTAGGCCCGGGAGAAACAAAAATAAGTTGGCC 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR CAA 72 bp | CCTTCAAACTGTTTTGCTGAGTCAGTTGAAGGTCAGTaGAACACACAGGAATCTTTGGCCTCTAGAATCAGG | + |
|
Preference number: 4 (lower is better) Translates to: PSNCFAESVEGQ*NTQESLASRIR Trigger: CCTGATTCTAGAGGCCAAAGATTCCTGTGTGTTCAACTGACCTTCAACTGACTCAGCAAAACAGTTTGAAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR CAA 72 bp | CTTTTTCTGTTCAGGAAAAGTGAGACTTGGCTTGCTTaGTTCTTTACCGTCAGAACAGGCTGTGAAGGACAG | + |
|
Preference number: 4 (lower is better) Translates to: LFLFRKSETWLA*FFTVRTGCEGQ Trigger: CTGTCCTTCACAGCCTGTTCTGACGGTAAAGAACAAAGCAAGCCAAGTCTCACTTTTCCTGAACAGAAAAAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR CAA 72 bp | TCCCTCTTTTTCTGTTCAGGAAAAGTGAGACTTGGCTaGCTTTGTTCTTTACCGTCAGAACAGGCTGTGAAG | + |
|
Preference number: 4 (lower is better) Translates to: SLFFCSGKVRLG*LCSLPSEQAVK Trigger: CTTCACAGCCTGTTCTGACGGTAAAGAACAAAGCAAGCCAAGTCTCACTTTTCCTGAACAGAAAAAGAGGGA 44% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| CDS-3UTR TCA 90 bp | AAGATGCGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATGGGTTGTCACATACCATaGCTTCACACCCTCTATTCC | + |
|
Preference number: 4 (lower is better) Translates to: KMRSKCLSTNSYLDLKTMGCHIP*LHTLYS Trigger: GGAATAGAGGGTGTGAAGTCATGGTATGTGACAACC...CATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCGCATCTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR TCA 90 bp | CTGGGAGGAAGAAGATCAAGCCTATACTTAAAGTTCAGTTCCTATTGCTTCCTCGGATTTTCATGGGCCTaGCTCTTTCAATTTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: LGGRRSSLYLKFSSYCFLGFSWA*LFQFAS Trigger: GGAAGCAAATTGAAAGAGTCAGGCCCATGAAAATCC...GAGGAAGCAATAGGAACTGAACTTTAAGTATAGGCTTGATCTTCTTCCTCCCAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR TCA 90 bp | GTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATGAAACAGGAGTTTGGTCCTTTTGTTaGAAATGGCTCCGGAGCGTG | + |
|
Preference number: 4 (lower is better) Translates to: VKVLKYQLVPGFENNETGVWSFC*KWLRSV Trigger: CACGCTCCGGAGCCATTTTCAACAAAAGGACCAAAC...TCCTGTTTCATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGAC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR GCA 90 bp | GAAGATGCGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATTTCTCGTACACACTGTaGACATGTCGCTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: EDAVKVLKYQLVPGFENNFSYTL*TCRFSS Trigger: ACTGGAGAAGCGACATGTGCACAGTGTGTACGAGAA...ATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCGCATCTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR GCA 90 bp | TGGTCCAGAAAGCACAATGACTATTTGATTTTCTGCTTGTTAACGAATTATCTGTCAGACACACTCTCCTaGAGCAGGCTGGAGAGCTCA | + |
|
Preference number: 4 (lower is better) Translates to: WSRKHNDYLIFCLLTNYLSDTLS*SRLESS Trigger: TGAGCTCTCCAGCCTGCTGCAGGAGAGTGTGTCTGA...CAGATAATTCGTTAACAAGCAGAAAATCAAATAGTCATTGTGCTTTCTGGACCA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| CDS-3UTR CCA 90 bp | ATGATGTATGACACATTTGTGCAGTGGCCAGAAGAGGGTATTGAACCCCTTGGACCCAGAGTATGGACTTaGCTATTCACTTTAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: MMYDTFVQWPEEGIEPLGPRVWT*LFTLRY Trigger: GTATCTTAAAGTGAATAGCCAAGTCCATACTCTGGG...TCCAAGGGGTTCAATACCCTCTTCTGGCCACTGCACAAATGTGTCATACATCAT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152039.9 |
||
| CDS-3UTR CCA 90 bp | TCAACAATTAGGAAGATGCGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATATAGCATCGAAGCCCTaGTCCCTAAAGGGAAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: STIRKMRSKCLSTNSYLDIASKP*SLKGRL Trigger: TAATCTTCCCTTTAGGGACCAGGGCTTCGATGCTAT...ATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCGCATCTTCCTAATTGTTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR CCA 90 bp | AAAATGATGTATGACACATTTGTGCAGTGGCCAGAAGAGGGTATTGAACCCCTTATAGCATCGAAGCCCTaGTCCCTAAAGGGAAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: KMMYDTFVQWPEEGIEPLIASKP*SLKGRL Trigger: TAATCTTCCCTTTAGGGACCAGGGCTTCGATGCTAT...AAGGGGTTCAATACCCTCTTCTGGCCACTGCACAAATGTGTCATACATCATTTT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152039.9 |
||
| 3UTR CAA 72 bp | CACAACCTCACTTGGCTATTTATGCTCCTAATACCTTaGGAGAAAATGTCACCAGAGGACAGAACATCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: HNLTWLFMLLIP*EKMSPEDRTSP Trigger: AGGAGATGTTCTGTCCTCTGGTGACATTTTCTCCAAAGGTATTAGGAGCATAAATAGCCAAGTGAGGTTGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR CAA 72 bp | GAGTCAGTTGAAGGTCAGTTGAACACACAGGAATCTTaGGCCTCTAGAATCAGGATGATGGATAGGCAAAAA | + |
|
Preference number: 4 (lower is better) Translates to: ESVEGQLNTQES*ASRIRMMDRQK Trigger: TTTTTGCCTATCCATCATCCTGATTCTAGAGGCCAAAGATTCCTGTGTGTTCAACTGACCTTCAACTGACTC 43% GC, longest homopolymer 5 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| CDS-3UTR CCA 90 bp | TCAACAATTAGGAAGATGCGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTCACAGCCCAGAGTATaGACTTGGCTATTCACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: STIRKMRSKCLSTNSYLDSQPRV*TWLFTL Trigger: TAAAGTGAATAGCCAAGTCCATACTCTGGGCTGTGA...ATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCGCATCTTCCTAATTGTTGA 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR CCA 90 bp | AAGATGCGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATGATAGCATCGAAGCCCTaGTCCCTAAAGGGAAGATTA | + |
|
Preference number: 4 (lower is better) Translates to: KMRSKCLSTNSYLDLKTMIASKP*SLKGRL Trigger: TAATCTTCCCTTTAGGGACCAGGGCTTCGATGCTAT...CATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCGCATCTT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| 3UTR CAA 72 bp | GCTTCCAAAAAGCTTGAGTCTTCTGAGTTGGAGTCGTaGGAGTCGAATGCAGAAACCCTCCTTAATATTTTT | + |
|
Preference number: 4 (lower is better) Translates to: ASKKLESSELES*ESNAETLLNIF Trigger: AAAAATATTAAGGAGGGTTTCTGCATTCGACTCCAACGACTCCAACTCAGAAGACTCAAGCTTTTTGGAAGC 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
||
| 3UTR CAA 72 bp | AATTATCTGGAACCATATTCCGTGGCCAACTTATTTTaGTTTCTCCCGGGCCTAGTCTCTTGTTCCTTCATA | + |
|
Preference number: 4 (lower is better) Translates to: NYLEPYSVANLF*FLPGLVSCSFI Trigger: TATGAAGGAACAAGAGACTAGGCCCGGGAGAAACAAAAATAAGTTGGCCACGGAATATGGTTCCAGATAATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR CAA 72 bp | ACTCCCACCACAGGGGTGAGGAGATGGAAATTTGACTaGAAGAACTTCAGGAGCTATACACTTTTAAAGTTT | + |
|
Preference number: 4 (lower is better) Translates to: TPTTGVRRWKFD*KNFRSYTLLKF Trigger: AAACTTTAAAAGTGTATAGCTCCTGAAGTTCTTCAAGTCAAATTTCCATCTCCTCACCCCTGTGGTGGGAGT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR CAA 72 bp | AGGGATCCCTTGAAGAAAGGTTGCCAGCCACAAATTTaGCTTAATATACAACAAAACGGCTGGATGCATAGA | + |
|
Preference number: 4 (lower is better) Translates to: RDPLKKGCQPQI*LNIQQNGWMHR Trigger: TCTATGCATCCAGCCGTTTTGTTGTATATTAAGCAAAATTTGTGGCTGGCAACCTTTCTTCAAGGGATCCCT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| CDS-3UTR TCA 90 bp | AAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATGAAACAGGATGCTGGATTTTCATGGGCCTaGCTCTTTCAATTTGCTTCC | + |
|
Preference number: 4 (lower is better) Translates to: KCLSTNSYLDLKTMKQDAGFSWA*LFQFAS Trigger: GGAAGCAAATTGAAAGAGTCAGGCCCATGAAAATCC...AGCATCCTGTTTCATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR GCA 90 bp | TCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATGAAACAGGATTTCTCGTACACACTGTaGACATGTCGCTTCTCCAGT | + |
|
Preference number: 4 (lower is better) Translates to: SKCLSTNSYLDLKTMKQDFSYTL*TCRFSS Trigger: ACTGGAGAAGCGACATGTGCACAGTGTGTACGAGAA...ATCCTGTTTCATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGAGGAAGAAGATCAAGCCTATACTTAAAGTTCAGTTCCTATTGCTTCCTCCCCAGAGTATGGACTTaGCTATTCACTTTAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: LGGRRSSLYLKFSSYCFLPRVWT*LFTLRY Trigger: GTATCTTAAAGTGAATAGCCAAGTCCATACTCTGGG...GAGGAAGCAATAGGAACTGAACTTTAAGTATAGGCTTGATCTTCTTCCTCCCAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR CCA 90 bp | GAAGATGCGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATTCACAGCCCAGAGTATaGACTTGGCTATTCACTTTA | + |
|
Preference number: 4 (lower is better) Translates to: EDAVKVLKYQLVPGFENNSQPRV*TWLFTL Trigger: TAAAGTGAATAGCCAAGTCCATACTCTGGGCTGTGA...ATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCGCATCTTC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR CCA 90 bp | CACACACATATACACCAAAACCTAATAACCCAGAGAAACTCACCAGTCACTTGCATTCATCCAAAGACCTaGAGAAAAACCAGGAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: HTHIHQNLITQRNSPVTCIHPKT*RKTRNE Trigger: TTCGTTCCTGGTTTTTCTCCAGGTCTTTGGATGAAT...GCAAGTGACTGGTGAGTTTCTCTGGGTTATTAGGTTTTGGTGTATATGTGTGTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| CDS-3UTR CCA 90 bp | CAACAAAACGGCTGGATGCATAGAATTTCTGCACTTAGCAAGGCTGCTGTCATTTCCTTAATATTTTTCTaGCAGAAGGATCACTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: QQNGWMHRISALSKAAVISLIFF*QKDHCC Trigger: ACAGCAGTGATCCTTCTGCCAGAAAAATATTAAGGA...AATGACAGCAGCCTTGCTAAGTGCAGAAATTCTATGCATCCAGCCGTTTTGTTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| CDS-3UTR CCA 90 bp | CCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCTGTAGCAGATGCAGTATCCTTAATATTTTTCTaGCAGAAGGATCACTGCTGT | + |
|
Preference number: 4 (lower is better) Translates to: PQILLLKLQQADPVADAVSLIFF*QKDHCC Trigger: ACAGCAGTGATCCTTCTGCCAGAAAAATATTAAGGA...TACTGCATCTGCTACAGGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| 3UTR CAA 72 bp | AAATTGAATGCAAGAAGCGCTTTTCACAGGGATCCCTaGAAGAAAGGTTGCCAGCCACAAATTTTGCTTAAT | + |
|
Preference number: 4 (lower is better) Translates to: KLNARSAFHRDP*KKGCQPQILLN Trigger: ATTAAGCAAAATTTGTGGCTGGCAACCTTTCTTCAAGGGATCCCTGTGAAAAGCGCTTCTTGCATTCAATTT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| CDS-3UTR CCA 90 bp | GTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATGAAACAGGAATTCATCCAAAGACCTaGAGAAAAACCAGGAACGAA | + |
|
Preference number: 4 (lower is better) Translates to: VKVLKYQLVPGFENNETGIHPKT*RKTRNE Trigger: TTCGTTCCTGGTTTTTCTCCAGGTCTTTGGATGAAT...TCCTGTTTCATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| 3UTR CAA 72 bp | CCGATAACTGATGAGCATTTCCTAGTTGAAAACTCTTaGGGTAATTTTGGCACAACCTCACTTGGCTATTTA | + |
|
Preference number: 4 (lower is better) Translates to: PITDEHFLVENS*GNFGTTSLGYL Trigger: TAAATAGCCAAGTGAGGTTGTGCCAAAATTACCCAAAGAGTTTTCAACTAGGAAATGCTCATCAGTTATCGG 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR CAA 72 bp | AAGGCATGGATTTTGTTACAATGCCCAGATGAATCATaGCACTATAGACTAGCAGAAATTCAACCTGTGACT | + |
|
Preference number: 4 (lower is better) Translates to: KAWILLQCPDES*HYRLAEIQPVT Trigger: AGTCACAGGTTGAATTTCTGCTAGTCTATAGTGCAATGATTCATCTGGGCATTGTAACAAAATCCATGCCTT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| CDS-3UTR CCA 90 bp | TGGTCCAGAAAGCACAATGACTATTTGATTTTCTGCTTGTTAACGAATTATCTGCCCAGAGTATGGACTTaGCTATTCACTTTAAGATAC | + |
|
Preference number: 4 (lower is better) Translates to: WSRKHNDYLIFCLLTNYLPRVWT*LFTLRY Trigger: GTATCTTAAAGTGAATAGCCAAGTCCATACTCTGGG...CAGATAATTCGTTAACAAGCAGAAAATCAAATAGTCATTGTGCTTTCTGGACCA 37% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| 3UTR CAA 72 bp | AAGAAGATCAAGCCTATACTTAAAGTTCAGTTCCTATaGCTTCCTCAGATTCTCTTATTGAAACTTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KKIKPILKVQFL*LPQILLLKLQQ Trigger: CTGCTGAAGTTTCAATAAGAGAATCTGAGGAAGCAATAGGAACTGAACTTTAAGTATAGGCTTGATCTTCTT 36% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS TCA 90 bp | TCAAAACAGCGGGTCAGCATAGGTGAGGACCTTCAGGCTGCCTCCTaGTATAGCTCCTATGGAGATGATAGCATCGAAGCCCTGGTCCCT | + |
|
Preference number: 5 (lower is better) Translates to: SKQRVSIGEDLQAAS*YSSYGDDSIEALVP Trigger: AGGGACCAGGGCTTCGATGCTATCATCTCCATAGGAGCTATATCAGGAGGCAGCCTGAAGGTCCTCACCTATGCTGACCCGCTGTTTTGA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
||
| CDS-3UTR CAA 90 bp | CCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCTGTAGCAGATGCAGTAACACGCGGCCAGGCTTaGCTCTGCAGGTCAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PQILLLKLQQADPVADAVTRGQA*LCRSVK Trigger: CTTCACTGACCTGCAGAGCAAAGCCTGGCCGCGTGT...TACTGCATCTGCTACAGGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR CAA 90 bp | CCTTCAAACTGTTTTGCTGAGTCAGTTGAAGGTCAGTTGAACACACAGGAATCTACACGCGGCCAGGCTTaGCTCTGCAGGTCAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: PSNCFAESVEGQLNTQESTRGQA*LCRSVK Trigger: CTTCACTGACCTGCAGAGCAAAGCCTGGCCGCGTGT...AGATTCCTGTGTGTTCAACTGACCTTCAACTGACTCAGCAAAACAGTTTGAAGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
||
| CDS-3UTR CAA 90 bp | AAAATGATGTATGACACATTTGTGCAGTGGCCAGAAGAGGGTATTGAACCCCTTACACGCGGCCAGGCTTaGCTCTGCAGGTCAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: KMMYDTFVQWPEEGIEPLTRGQA*LCRSVK Trigger: CTTCACTGACCTGCAGAGCAAAGCCTGGCCGCGTGT...AAGGGGTTCAATACCCTCTTCTGGCCACTGCACAAATGTGTCATACATCATTTT 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000152039.9 |
||
| CDS-3UTR CAA 90 bp | CCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCTGTAGCAGATGCAGTAGTGTCTGGAAGGCTGTaGGGACACGGTGCTATTGGC | + |
|
Preference number: 5 (lower is better) Translates to: PQILLLKLQQADPVADAVVSGRL*GHGAIG Trigger: GCCAATAGCACCGTGTCCCAACAGCCTTCCAGACAC...TACTGCATCTGCTACAGGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR CAA 90 bp | GAAGATGCGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATACACGCGGCCAGGCTTaGCTCTGCAGGTCAGTGAAG | + |
|
Preference number: 5 (lower is better) Translates to: EDAVKVLKYQLVPGFENNTRGQA*LCRSVK Trigger: CTTCACTGACCTGCAGAGCAAAGCCTGGCCGCGTGT...ATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCGCATCTTC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
||
| CDS-3UTR CAA 90 bp | GACACATTTGTGCAGTGGCCAGAAGAGGGTATTGAACCCCTTGGAGCCAGAGGTAAGGGAAGATTAAGGTaGTCACATACCATGACTTCA | + |
|
Preference number: 5 (lower is better) Translates to: DTFVQWPEEGIEPLGARGKGRLR*SHTMTS Trigger: TGAAGTCATGGTATGTGACAACCTTAATCTTCCCTT...ACCTCTGGCTCCAAGGGGTTCAATACCCTCTTCTGGCCACTGCACAAATGTGTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000152039.9 |
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| CDS-3UTR CAA 90 bp | GATTCTCTTATTGAAACTTCAGCAGGCAGATCCTGTAGCAGATGCAGTACGTGTCTTGAGTCTTCTGAGTaGGAGTCGTTGGAGTCGAAT | + |
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Preference number: 5 (lower is better) Translates to: DSLIETSAGRSCSRCSTCLESSE*ESLESN Trigger: ATTCGACTCCAACGACTCCAACTCAGAAGACTCAAG...ACACGTACTGCATCTGCTACAGGATCTGCCTGCTGAAGTTTCAATAAGAGAATC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS-3UTR CAA 90 bp | TCTCTTATTGAAACTTCAGCAGGCAGATCCTGTAGCAGATGCAGTACGTGTCAGGGTTCTTCTGTTCCATaGCCCAGACATAAATCATCA | + |
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Preference number: 5 (lower is better) Translates to: SLIETSAGRSCSRCSTCQGSSVP*PRHKSS Trigger: TGATGATTTATGTCTGGGCAATGGAACAGAAGAACC...CTGACACGTACTGCATCTGCTACAGGATCTGCCTGCTGAAGTTTCAATAAGAGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS-3UTR CAA 90 bp | CAGTTCCTATTGCTTCCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCTCCAGCCCAAGTGTCTTaGAGAAGATGTGTCTACGAA | + |
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Preference number: 5 (lower is better) Translates to: QFLLLPQILLLKLQQADPPAQVS*RRCVYE Trigger: TTCGTAGACACATCTTCTCAAAGACACTTGGGCTGG...AGGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGGAAGCAATAGGAACTG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS-3UTR CAA 90 bp | TCAACAATTAGGAAGATGCGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATCCAGCCCAAGTGTCTTaGAGAAGATGTGTCTACGAA | + |
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Preference number: 5 (lower is better) Translates to: STIRKMRSKCLSTNSYLDPAQVS*RRCVYE Trigger: TTCGTAGACACATCTTCTCAAAGACACTTGGGCTGG...ATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCGCATCTTCCTAATTGTTGA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS-3UTR CAA 90 bp | CTGGTTTACATTTGGCCCATTTCCCATCTGCATTACCTTCAAACTGTTTTGCTGCTTGAGTCTTCTGAGTaGGAGTCGTTGGAGTCGAAT | + |
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Preference number: 5 (lower is better) Translates to: LVYIWPISHLHYLQTVLLLESSE*ESLESN Trigger: ATTCGACTCCAACGACTCCAACTCAGAAGACTCAAG...CAGCAAAACAGTTTGAAGGTAATGCAGATGGGAAATGGGCCAAATGTAAACCAG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| CDS-3UTR CAA 90 bp | CCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCTGTAGCAGATGCAGTAGTGCTTCCAAAAAGCTaGAGTCTTCTGAGTTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: PQILLLKLQQADPVADAVVLPKS*SLLSWS Trigger: ACTCCAACTCAGAAGACTCAAGCTTTTTGGAAGCAC...TACTGCATCTGCTACAGGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS-3UTR CAA 90 bp | CCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCTGTAGCAGATGCAGTAGCCCAGAGTATGGACTaGGCTATTCACTTTAAGATA | + |
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Preference number: 5 (lower is better) Translates to: PQILLLKLQQADPVADAVAQSMD*AIHFKI Trigger: TATCTTAAAGTGAATAGCCAAGTCCATACTCTGGGC...TACTGCATCTGCTACAGGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS-3UTR CAA 90 bp | TCTCTTATTGAAACTTCAGCAGGCAGATCCTGTAGCAGATGCAGTACGTGTCAGAAGGGAAGATTAAGGTaGTCACATACCATGACTTCA | + |
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Preference number: 5 (lower is better) Translates to: SLIETSAGRSCSRCSTCQKGRLR*SHTMTS Trigger: TGAAGTCATGGTATGTGACAACCTTAATCTTCCCTT...CTGACACGTACTGCATCTGCTACAGGATCTGCCTGCTGAAGTTTCAATAAGAGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS-3UTR CAA 90 bp | CCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCTGTAGCAGATGCAGTAGGTTCTTCTGTTCCATaGCCCAGACATAAATCATCA | + |
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Preference number: 5 (lower is better) Translates to: PQILLLKLQQADPVADAVGSSVP*PRHKSS Trigger: TGATGATTTATGTCTGGGCAATGGAACAGAAGAACC...TACTGCATCTGCTACAGGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS-3UTR CAA 90 bp | TCAACAATTAGGAAGATGCGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATCTAAGTTTGGTCCTTTaGTTGAAAATGGCTCCGGAG | + |
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Preference number: 5 (lower is better) Translates to: STIRKMRSKCLSTNSYLDLSLVL*LKMAPE Trigger: CTCCGGAGCCATTTTCAACAAAAGGACCAAACTTAG...ATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCGCATCTTCCTAATTGTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS-3UTR CAA 90 bp | CAGTTCCTATTGCTTCCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCTGTGCTTCCAAAAAGCTaGAGTCTTCTGAGTTGGAGT | + |
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Preference number: 5 (lower is better) Translates to: QFLLLPQILLLKLQQADPVLPKS*SLLSWS Trigger: ACTCCAACTCAGAAGACTCAAGCTTTTTGGAAGCAC...AGGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGGAAGCAATAGGAACTG 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS-3UTR CAA 90 bp | GTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATGAAACAGGAAGTTTGGTCCTTTTGTaGAAAATGGCTCCGGAGCGT | + |
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Preference number: 5 (lower is better) Translates to: VKVLKYQLVPGFENNETGSLVLL*KMAPER Trigger: ACGCTCCGGAGCCATTTTCAACAAAAGGACCAAACT...TCCTGTTTCATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS-3UTR CAA 90 bp | GAAGATGCGGTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATCTAAGTTTGGTCCTTTaGTTGAAAATGGCTCCGGAG | + |
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Preference number: 5 (lower is better) Translates to: EDAVKVLKYQLVPGFENNLSLVL*LKMAPE Trigger: CTCCGGAGCCATTTTCAACAAAAGGACCAAACTTAG...ATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGACCGCATCTTC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS-3UTR CAA 90 bp | TCAGTTCCTATTGCTTCCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCAAGGGAAGATTAAGGTaGTCACATACCATGACTTCA | + |
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Preference number: 5 (lower is better) Translates to: SVPIASSDSLIETSAGRSKGRLR*SHTMTS Trigger: TGAAGTCATGGTATGTGACAACCTTAATCTTCCCTT...GGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGGAAGCAATAGGAACTGA 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS-3UTR CAA 90 bp | CTGGGAGGAAGAAGATCAAGCCTATACTTAAAGTTCAGTTCCTATTGCTTCCTCAAGGGAAGATTAAGGTaGTCACATACCATGACTTCA | + |
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Preference number: 5 (lower is better) Translates to: LGGRRSSLYLKFSSYCFLKGRLR*SHTMTS Trigger: TGAAGTCATGGTATGTGACAACCTTAATCTTCCCTT...GAGGAAGCAATAGGAACTGAACTTTAAGTATAGGCTTGATCTTCTTCCTCCCAG 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS-3UTR CAA 90 bp | TGCAGTTACCTTCAAGGGAATAAATGCCATGGCATGCAACTGCAAGTCCCAATTACACCTCATCTAAGTTaGGTCCTTTTGTTGAAAATG | + |
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Preference number: 5 (lower is better) Translates to: CSYLQGNKCHGMQLQVPITPHLS*VLLLKM Trigger: CATTTTCAACAAAAGGACCAAACTTAGATGAGGTGT...AATTGGGACTTGCAGTTGCATGCCATGGCATTTATTCCCTTGAAGGTAACTGCA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| CDS-3UTR CAA 90 bp | ATTTGGCCCATTTCCCATCTGCATTACCTTCAAACTGTTTTGCTGAGTCAGTTGAAGGATTTCCCAAAATaGCTATACAATCCGTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: IWPISHLHYLQTVLLSQLKDFPK*LYNPFS Trigger: AGAGAACGGATTGTATAGCAATTTTGGGAAATCCTT...CAACTGACTCAGCAAAACAGTTTGAAGGTAATGCAGATGGGAAATGGGCCAAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| CDS-3UTR CAA 90 bp | TCAGTTCCTATTGCTTCCTCAGATTCTCTTATTGAAACTTCAGCAGGCAGATCCAAGGATTTCCCAAAATaGCTATACAATCCGTTCTCT | + |
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Preference number: 5 (lower is better) Translates to: SVPIASSDSLIETSAGRSKDFPK*LYNPFS Trigger: AGAGAACGGATTGTATAGCAATTTTGGGAAATCCTT...GGATCTGCCTGCTGAAGTTTCAATAAGAGAATCTGAGGAAGCAATAGGAACTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS-3UTR CAA 90 bp | TGGTCCAGAAAGCACAATGACTATTTGATTTTCTGCTTGTTAACGAATTATCTGAGTTTGGTCCTTTTGTaGAAAATGGCTCCGGAGCGT | + |
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Preference number: 5 (lower is better) Translates to: WSRKHNDYLIFCLLTNYLSLVLL*KMAPER Trigger: ACGCTCCGGAGCCATTTTCAACAAAAGGACCAAACT...CAGATAATTCGTTAACAAGCAGAAAATCAAATAGTCATTGTGCTTTCTGGACCA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000147525.9 |
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| CDS-3UTR CAA 90 bp | GTCAAAGTGCTTAAGTACCAACTCGTACCTGGATTTGAAAACAATGAAACAGGAACACCTCATCTAAGTTaGGTCCTTTTGTTGAAAATG | + |
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Preference number: 5 (lower is better) Translates to: VKVLKYQLVPGFENNETGTPHLS*VLLLKM Trigger: CATTTTCAACAAAAGGACCAAACTTAGATGAGGTGT...TCCTGTTTCATTGTTTTCAAATCCAGGTACGAGTTGGTACTTAAGCACTTTGAC 38% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000147525.9 ENSMUST00000171777.2 |
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| CDS CCA 72 bp | TCCAGTTCCACAACCAATGTCAGCGACGAGGCTGCCTaGCTTCTGGTCCTGCAGGAACTGGCGGACACGCGG | + |
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Preference number: 6 (lower is better) Translates to: SSSTTNVSDEAA*LLVLQELADTR Trigger: CCGCGTGTCCGCCAGTTCCTGCAGGACCAGAAGCCAGGCAGCCTCGTCGCTGACATTGGTTGTGGAACTGGA 62% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000152039.9 ENSMUST00000171777.2 |
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| CDS GCA 72 bp | ACTTTCCAGTTCCACAACCAATGTCAGCGACGAGGCTaGCTGGCTTCTGGTCCTGCAGGAACTGGCGGACAC | + |
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Preference number: 6 (lower is better) Translates to: TFQFHNQCQRRG*LASGPAGTGGH Trigger: GTGTCCGCCAGTTCCTGCAGGACCAGAAGCCAGGCAGCCTCGTCGCTGACATTGGTTGTGGAACTGGAAAGT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000152039.9 ENSMUST00000171777.2 |
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| CDS TCA 72 bp | CGGGTCAGCATAGGTGAGGACCTTCAGGCTGCCTCCTaGTATAGCTCCTATGGAGATGATAGCATCGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: RVSIGEDLQAAS*YSSYGDDSIEA Trigger: GGCTTCGATGCTATCATCTCCATAGGAGCTATATCAGGAGGCAGCCTGAAGGTCCTCACCTATGCTGACCCG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000135373.8 |
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| CDS CAA 72 bp | GCATCGAAGCCCTGGTCCCTAAAGGGAAGATTAAGGTaGTCACATACCATGACTTCACACCCTCTATTCCGG | + |
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Preference number: 6 (lower is better) Translates to: ASKPWSLKGRLR*SHTMTSHPLFR Trigger: CCGGAATAGAGGGTGTGAAGTCATGGTATGTGACAACCTTAATCTTCCCTTTAGGGACCAGGGCTTCGATGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000152039.9 ENSMUST00000171777.2 |
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| CDS CAA 90 bp | GAGATGATAGCATCGAAGCCCTGGTCCCTAAAGGGAAGATTAAGGTaGTCACATACCATGACTTCACACCCTCTATTCCGGGCAATCTCT | + |
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Preference number: 6 (lower is better) Translates to: EMIASKPWSLKGRLR*SHTMTSHPLFRAIS Trigger: AGAGATTGCCCGGAATAGAGGGTGTGAAGTCATGGTATGTGACAACCTTAATCTTCCCTTTAGGGACCAGGGCTTCGATGCTATCATCTC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000135373.8 ENSMUST00000147525.9 ENSMUST00000152039.9 ENSMUST00000171777.2 |
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