Pregenerated sensors for TRMT61A (Mus musculus)
Ensembl gene IDs: ENSMUSG00000060950Ensembl transcript IDs: ENSMUST00000084947.10, ENSMUST00000168338.2, ENSMUST00000221089.2, ENSMUST00000222737.2
Found 164 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | CCCCGCCCCCATCTCTTTCTAAACACAAGCCACGAGGGCAGTGGCTaGCCATATAAGGCAGCCTCTGGCCTCCCTGCCTGCTTGCCTGTG | + |
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Preference number: 1 (lower is better) Translates to: PRPHLFLNTSHEGSG*PYKAASGLPACLPV Trigger: CACAGGCAAGCAGGCAGGGAGGCCAGAGGCTGCCTTATATGGTCAGCCACTGCCCTCGTGGCTTGTGTTTAGAAAGAGATGGGGGCGGGG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR CCA 90 bp | GGCTTTCTGGTTAATTTAGCTCAACCACAGCTTCTGGCTAAGCTCTaGAGCACCAGGGCCTGGAGACTTGCGCCAGGGATGGGACAACCC | + |
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Preference number: 1 (lower is better) Translates to: GFLVNLAQPQLLAKL*STRAWRLAPGMGQP Trigger: GGGTTGTCCCATCCCTGGCGCAAGTCTCCAGGCCCTGGTGCTCCAGAGCTTAGCCAGAAGCTGTGGTTGAGCTAAATTAACCAGAAAGCC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR TCA 90 bp | CAATCCTGCTGTGTTCTATCCCTCAGGATGATGCCTAACCCCAGATaGCAGCACACCAGCACACCAGGAACTCCACACACACACACACAC | + |
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Preference number: 1 (lower is better) Translates to: QSCCVLSLRMMPNPR*QHTSTPGTPHTHTH Trigger: GTGTGTGTGTGTGTGTGGAGTTCCTGGTGTGCTGGTGTGCTGTCATCTGGGGTTAGGCATCATCCTGAGGGATAGAACACAGCAGGATTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR CCA 90 bp | CCTGTGCAGCACATGATTATTGATTATCATCACCTCCTTTGTTCCTaGGCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTATAGGGAG | + |
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Preference number: 1 (lower is better) Translates to: PVQHMIIDYHHLLCS*ASLVPPSALGKYRE Trigger: CTCCCTATACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGCCCAGGAACAAAGGAGGTGATGATAATCAATAATCATGTGCTGCACAGG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR CCA 90 bp | CGCCCTCAACTTTTACCATTTAGTCTCAAAACCCAGGAAGGACTATaGAGAGGAAAGACTCATGTTGACAACAAAGAGCCAGGACAGAGC | + |
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Preference number: 1 (lower is better) Translates to: RPQLLPFSLKTQEGL*RGKTHVDNKEPGQS Trigger: GCTCTGTCCTGGCTCTTTGTTGTCAACATGAGTCTTTCCTCTCCATAGTCCTTCCTGGGTTTTGAGACTAAATGGTAAAAGTTGAGGGCG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR CCA 90 bp | GCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTATAGGGAGAGGAGGGCAGGGCTTCTGGCTAAGCTCTaGAGCACCAGGGCCTGGAGA | + |
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Preference number: 2 (lower is better) Translates to: ASLVPPSALGKYRERRAGLLAKL*STRAWR Trigger: TCTCCAGGCCCTGGTGCTCCAGAGCTTAGCCAGAAG...CCCTGCCCTCCTCTCCCTATACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR TCA 90 bp | CACATGTGGCAAGTCCACAGCCAGGCTCTTAGCCCATGCACAGGCTCCTCTATGCACACACGGTCGTGCTaGCACACACGTGGCCTGTGC | + |
|
Preference number: 2 (lower is better) Translates to: HMWQVHSQALSPCTGSSMHTRSC*HTRGLC Trigger: GCACAGGCCACGTGTGTGTCAGCACGACCGTGTGTG...CATAGAGGAGCCTGTGCATGGGCTAAGAGCCTGGCTGTGGACTTGCCACATGTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR GCA 90 bp | TCACCTCCTTTGTTCCTGGGCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTACCAGGCTATAGGCAGTaGCCAAAGCTTCCGACGCCC | + |
|
Preference number: 2 (lower is better) Translates to: SPPLFLGQPGPSISLREVPGYRQ*PKLPTP Trigger: GGGCGTCGGAAGCTTTGGGCACTGCCTATAGCCTGG...TACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGCCCAGGAACAAAGGAGGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR CCA 90 bp | CACATGTGGCAAGTCCACAGCCAGGCTCTTAGCCCATGCACAGGCTCCTCTATGCACCTCCTTTGTTCCTaGGCCAGCCTGGTCCCTCCA | + |
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Preference number: 2 (lower is better) Translates to: HMWQVHSQALSPCTGSSMHLLCS*ASLVPP Trigger: TGGAGGGACCAGGCTGGCCCAGGAACAAAGGAGGTG...CATAGAGGAGCCTGTGCATGGGCTAAGAGCCTGGCTGTGGACTTGCCACATGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR GCA 90 bp | CAACAAGGACTGGAAGGTCACGGAAGCAGGGACCAATCCTGCTGTGTTCTATCCCAGGGCCTGGAGACTTaGGCCAGGGATGGGACAACC | + |
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Preference number: 2 (lower is better) Translates to: QQGLEGHGSRDQSCCVLSQGLET*ARDGTT Trigger: GGTTGTCCCATCCCTGGCGCAAGTCTCCAGGCCCTG...GGATAGAACACAGCAGGATTGGTCCCTGCTTCCGTGACCTTCCAGTCCTTGTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR CCA 90 bp | CGCTTTGACCCCAGCTCCAACAAGGACTGGAAGGTCACGGAAGCAGGGACCAATCTTCTGGCTAAGCTCTaGAGCACCAGGGCCTGGAGA | + |
|
Preference number: 2 (lower is better) Translates to: RFDPSSNKDWKVTEAGTNLLAKL*STRAWR Trigger: TCTCCAGGCCCTGGTGCTCCAGAGCTTAGCCAGAAG...ATTGGTCCCTGCTTCCGTGACCTTCCAGTCCTTGTTGGAGCTGGGGTCAAAGCG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR TCA 90 bp | CAAGGACTGGAAGGTCACGGAAGCAGGGACCAATCCTGCTGTGTTCTATCCCTCCACGAGGGCAGTGGCTaGCCATATAAGGCAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: QGLEGHGSRDQSCCVLSLHEGSG*PYKAAS Trigger: AGAGGCTGCCTTATATGGTCAGCCACTGCCCTCGTG...GAGGGATAGAACACAGCAGGATTGGTCCCTGCTTCCGTGACCTTCCAGTCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR GCA 90 bp | CACATGTGGCAAGTCCACAGCCAGGCTCTTAGCCCATGCACAGGCTCCTCTATGTCTGGCCTCCCTGCCTaGTTGCCTGTGCTGTTCATT | + |
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Preference number: 2 (lower is better) Translates to: HMWQVHSQALSPCTGSSMSGLPA*LPVLFI Trigger: AATGAACAGCACAGGCAAGCAGGCAGGGAGGCCAGA...CATAGAGGAGCCTGTGCATGGGCTAAGAGCCTGGCTGTGGACTTGCCACATGTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR TCA 90 bp | CAACAAGGACTGGAAGGTCACGGAAGCAGGGACCAATCCTGCTGTGTTCTATCCCACGAGGGCAGTGGCTaGCCATATAAGGCAGCCTCT | + |
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Preference number: 2 (lower is better) Translates to: QQGLEGHGSRDQSCCVLSHEGSG*PYKAAS Trigger: AGAGGCTGCCTTATATGGTCAGCCACTGCCCTCGTG...GGATAGAACACAGCAGGATTGGTCCCTGCTTCCGTGACCTTCCAGTCCTTGTTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR TCA 90 bp | CTGGGCTTTCTGGTTAATTTAGCTCAACCACAGCTTCTGGCTAAGCTCTGGAGCGGAATGCCTCCCAGCTaGGCAGGGCCAGCCTACTCA | + |
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Preference number: 2 (lower is better) Translates to: LGFLVNLAQPQLLAKLWSGMPPS*AGPAYS Trigger: TGAGTAGGCTGGCCCTGCTCAGCTGGGAGGCATTCC...GCTCCAGAGCTTAGCCAGAAGCTGTGGTTGAGCTAAATTAACCAGAAAGCCCAG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR TCA 90 bp | CACATGTGGCAAGTCCACAGCCAGGCTCTTAGCCCATGCACAGGCTCCTCTATGAGGAAAGACTCATGTTaGCAACAAAGAGCCAGGACA | + |
|
Preference number: 2 (lower is better) Translates to: HMWQVHSQALSPCTGSSMRKDSC*QQRART Trigger: TGTCCTGGCTCTTTGTTGTCAACATGAGTCTTTCCT...CATAGAGGAGCCTGTGCATGGGCTAAGAGCCTGGCTGTGGACTTGCCACATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR CCA 90 bp | CACATGTGGCAAGTCCACAGCCAGGCTCTTAGCCCATGCACAGGCTCCTCTATGACCCAGGAAGGACTATaGAGAGGAAAGACTCATGTT | + |
|
Preference number: 2 (lower is better) Translates to: HMWQVHSQALSPCTGSSMTQEGL*RGKTHV Trigger: AACATGAGTCTTTCCTCTCCATAGTCCTTCCTGGGT...CATAGAGGAGCCTGTGCATGGGCTAAGAGCCTGGCTGTGGACTTGCCACATGTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR TCA 90 bp | TTTAGTCTCAAAACCCAGGAAGGACTATGGAGAGGAAAGACTCATGTTGACAACGGAATGCCTCCCAGCTaGGCAGGGCCAGCCTACTCA | + |
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Preference number: 2 (lower is better) Translates to: FSLKTQEGLWRGKTHVDNGMPPS*AGPAYS Trigger: TGAGTAGGCTGGCCCTGCTCAGCTGGGAGGCATTCC...GTTGTCAACATGAGTCTTTCCTCTCCATAGTCCTTCCTGGGTTTTGAGACTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR GCA 90 bp | GTGGGGAAAATATTTATTATCCTTTGGGTGCCCTCGGGTATGACATATGACAGTCAGGGCCTGGAGACTTaGGCCAGGGATGGGACAACC | + |
|
Preference number: 2 (lower is better) Translates to: VGKIFIILWVPSGMTYDSQGLET*ARDGTT Trigger: GGTTGTCCCATCCCTGGCGCAAGTCTCCAGGCCCTG...ACTGTCATATGTCATACCCGAGGGCACCCAAAGGATAATAAATATTTTCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR GCA 90 bp | AACTTTTACCATTTAGTCTCAAAACCCAGGAAGGACTATGGAGAGGAAAGACTCTCTGGCCTCCCTGCCTaGTTGCCTGTGCTGTTCATT | + |
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Preference number: 2 (lower is better) Translates to: NFYHLVSKPRKDYGEERLSGLPA*LPVLFI Trigger: AATGAACAGCACAGGCAAGCAGGCAGGGAGGCCAGA...GAGTCTTTCCTCTCCATAGTCCTTCCTGGGTTTTGAGACTAAATGGTAAAAGTT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR CAA 90 bp | GCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTATAGGGAGAGGAGGGCAGGGGGCCTCCCTGCCTGCTaGCCTGTGCTGTTCATTTGG | + |
|
Preference number: 3 (lower is better) Translates to: ASLVPPSALGKYRERRAGGLPAC*PVLFIW Trigger: CCAAATGAACAGCACAGGCAAGCAGGCAGGGAGGCC...CCCTGCCCTCCTCTCCCTATACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGC 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR TCA 72 bp | GTCTCGCGATGGCTGCTTCCACGCAGCAGCAGCAGCTaGCTGGCAGCCTCACACCAAGATGATCTGAGCACC | + |
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Preference number: 3 (lower is better) Translates to: VSRWLLPRSSSS*LAASHQDDLST Trigger: GGTGCTCAGATCATCTTGGTGTGAGGCTGCCAGTCAGCTGCTGCTGCTGCGTGGAAGCAGCCATCGCGAGAC 61% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR GCA 72 bp | CACATGTGGCAAGTCCACAGCCAGGCTCTTAGCCCATaGACAGGCTCCTCTATGATCCGCTTTGACCCCAGC | + |
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Preference number: 3 (lower is better) Translates to: HMWQVHSQALSP*TGSSMIRFDPS Trigger: GCTGGGGTCAAAGCGGATCATAGAGGAGCCTGTGCATGGGCTAAGAGCCTGGCTGTGGACTTGCCACATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR TCA 72 bp | CATCTCTTTCTAAACACAAGCCACGAGGGCAGTGGCTaGCCATATAAGGCAGCCTCTGGCCTCCCTGCCTGC | + |
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Preference number: 3 (lower is better) Translates to: HLFLNTSHEGSG*PYKAASGLPAC Trigger: GCAGGCAGGGAGGCCAGAGGCTGCCTTATATGGTCAGCCACTGCCCTCGTGGCTTGTGTTTAGAAAGAGATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR TCA 72 bp | GCTAGCCACATACCGAGAATGGACACCAGGCCAAGGTaGCACATGTGGCAAGTCCACAGCCAGGCTCTTAGC | + |
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Preference number: 3 (lower is better) Translates to: ASHIPRMDTRPR*HMWQVHSQALS Trigger: GCTAAGAGCCTGGCTGTGGACTTGCCACATGTGTCACCTTGGCCTGGTGTCCATTCTCGGTATGTGGCTAGC 57% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR TCA 72 bp | GCAGCAGCTGACTGGCAGCCTCACACCAAGATGATCTaGGCACCGAGCACTGAAACTCCCTTGAAGCTAGCC | + |
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Preference number: 3 (lower is better) Translates to: AAADWQPHTKMI*APSTETPLKLA Trigger: GGCTAGCTTCAAGGGAGTTTCAGTGCTCGGTGCTCAGATCATCTTGGTGTGAGGCTGCCAGTCAGCTGCTGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR TCA 72 bp | GCAGGGACCAATCCTGCTGTGTTCTATCCCTCAGGATaGTGCCTAACCCCAGATGACAGCACACCAGCACAC | + |
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Preference number: 3 (lower is better) Translates to: AGTNPAVFYPSG*CLTPDDSTPAH Trigger: GTGTGCTGGTGTGCTGTCATCTGGGGTTAGGCATCATCCTGAGGGATAGAACACAGCAGGATTGGTCCCTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR GCA 72 bp | CAAGGACTGGAAGGTCACGGAAGCAGGGACCAATCCTaGTGTGTTCTATCCCTCAGGATGATGCCTAACCCC | + |
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Preference number: 3 (lower is better) Translates to: QGLEGHGSRDQS*CVLSLRMMPNP Trigger: GGGGTTAGGCATCATCCTGAGGGATAGAACACAGCAGGATTGGTCCCTGCTTCCGTGACCTTCCAGTCCTTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR CCA 72 bp | GTTAATTTAGCTCAACCACAGCTTCTGGCTAAGCTCTaGAGCACCAGGGCCTGGAGACTTGCGCCAGGGATG | + |
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Preference number: 3 (lower is better) Translates to: VNLAQPQLLAKL*STRAWRLAPGM Trigger: CATCCCTGGCGCAAGTCTCCAGGCCCTGGTGCTCCAGAGCTTAGCCAGAAGCTGTGGTTGAGCTAAATTAAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR CAA 90 bp | CTGGGCTTTCTGGTTAATTTAGCTCAACCACAGCTTCTGGCTAAGCTCTGGAGCGGCCTCCCTGCCTGCTaGCCTGTGCTGTTCATTTGG | + |
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Preference number: 3 (lower is better) Translates to: LGFLVNLAQPQLLAKLWSGLPAC*PVLFIW Trigger: CCAAATGAACAGCACAGGCAAGCAGGCAGGGAGGCC...GCTCCAGAGCTTAGCCAGAAGCTGTGGTTGAGCTAAATTAACCAGAAAGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR CAA 90 bp | TCACCTCCTTTGTTCCTGGGCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTAGAGGAAAGACTCATGTaGACAACAAAGAGCCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: SPPLFLGQPGPSISLREVEERLM*TTKSQD Trigger: GTCCTGGCTCTTTGTTGTCAACATGAGTCTTTCCTC...TACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGCCCAGGAACAAAGGAGGTGA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR TCA 72 bp | TGTGTTCTATCCCTCAGGATGATGCCTAACCCCAGATaGCAGCACACCAGCACACCAGGAACTCCACACACA | + |
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Preference number: 3 (lower is better) Translates to: CVLSLRMMPNPR*QHTSTPGTPHT Trigger: TGTGTGTGGAGTTCCTGGTGTGCTGGTGTGCTGTCATCTGGGGTTAGGCATCATCCTGAGGGATAGAACACA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR CAA 90 bp | CAAGGACTGGAAGGTCACGGAAGCAGGGACCAATCCTGCTGTGTTCTATCCCTCGAGGAAAGACTCATGTaGACAACAAAGAGCCAGGAC | + |
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Preference number: 3 (lower is better) Translates to: QGLEGHGSRDQSCCVLSLEERLM*TTKSQD Trigger: GTCCTGGCTCTTTGTTGTCAACATGAGTCTTTCCTC...GAGGGATAGAACACAGCAGGATTGGTCCCTGCTTCCGTGACCTTCCAGTCCTTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR TCA 72 bp | CATGTTGACAACAAAGAGCCAGGACAGAGCTTGCGCTaGGCAGTGATGAAGTGGAGACTTCCCTCTCAGAAG | + |
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Preference number: 3 (lower is better) Translates to: HVDNKEPGQSLR*AVMKWRLPSQK Trigger: CTTCTGAGAGGGAAGTCTCCACTTCATCACTGCTCAGCGCAAGCTCTGTCCTGGCTCTTTGTTGTCAACATG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR CCA 72 bp | CACATGATTATTGATTATCATCACCTCCTTTGTTCCTaGGCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAG | + |
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Preference number: 3 (lower is better) Translates to: HMIIDYHHLLCS*ASLVPPSALGK Trigger: CTTCCCTAAGGCTGATGGAGGGACCAGGCTGGCCCAGGAACAAAGGAGGTGATGATAATCAATAATCATGTG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR-3UTR CAA 90 bp | GTGGGGAAAATATTTATTATCCTTTGGGTGCCCTCGGGTATGACATATGACAGTAGCACTGAAACTCCCTaGAAGCTAGCCACATACCGA | + |
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Preference number: 3 (lower is better) Translates to: VGKIFIILWVPSGMTYDSSTETP*KLATYR Trigger: TCGGTATGTGGCTAGCTTCAAGGGAGTTTCAGTGCT...ACTGTCATATGTCATACCCGAGGGCACCCAAAGGATAATAAATATTTTCCCCAC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR CCA 72 bp | CTTTTACCATTTAGTCTCAAAACCCAGGAAGGACTATaGAGAGGAAAGACTCATGTTGACAACAAAGAGCCA | + |
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Preference number: 3 (lower is better) Translates to: LLPFSLKTQEGL*RGKTHVDNKEP Trigger: TGGCTCTTTGTTGTCAACATGAGTCTTTCCTCTCCATAGTCCTTCCTGGGTTTTGAGACTAAATGGTAAAAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR GCA 90 bp | GCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTATAGGGAGAGGAGGGCAGGGCCGGGTCTGGGTCTGTaGCCCACGCTGCACACGCAC | + |
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Preference number: 4 (lower is better) Translates to: ASLVPPSALGKYRERRAGPGLGL*PTLHTH Trigger: GTGCGTGTGCAGCGTGGGGCACAGACCCAGACCCGG...CCCTGCCCTCCTCTCCCTATACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGC 66% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| 3UTR CAA 72 bp | TTCTGGCTAAGCTCTGGAGCACCAGGGCCTGGAGACTaGCGCCAGGGATGGGACAACCCACGCTCCCGTAGG | + |
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Preference number: 4 (lower is better) Translates to: FWLSSGAPGPGD*RQGWDNPRSRR Trigger: CCTACGGGAGCGTGGGTTGTCCCATCCCTGGCGCAAGTCTCCAGGCCCTGGTGCTCCAGAGCTTAGCCAGAA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR GCA 90 bp | AGGGCAGTGGCTGACCATATAAGGCAGCCTCTGGCCTCCCTGCCTGCTTGCCTGTGTGAAGCCATGGGCTaGCAGCGCCTGGCATGTCCG | + |
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Preference number: 4 (lower is better) Translates to: RAVADHIRQPLASLPACLCEAMG*QRLACP Trigger: CGGACATGCCAGGCGCTGGCAGCCCATGGCTTCACA...CAGGCAAGCAGGCAGGGAGGCCAGAGGCTGCCTTATATGGTCAGCCACTGCCCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR GCA 90 bp | AGGGCAGTGGCTGACCATATAAGGCAGCCTCTGGCCTCCCTGCCTGCTTGCCTGGCTACCATCGAGCCGTaGCCCAGTGACAGGATGGCT | + |
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Preference number: 4 (lower is better) Translates to: RAVADHIRQPLASLPACLATIEP*PSDRMA Trigger: AGCCATCCTGTCACTGGGGCACGGCTCGATGGTAGC...CAGGCAAGCAGGCAGGGAGGCCAGAGGCTGCCTTATATGGTCAGCCACTGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR GCA 90 bp | GCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTATAGGGAGAGGAGGGCAGGGGTCTGTGCCCCACGCTaGACACGCACTGCTACCATC | + |
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Preference number: 4 (lower is better) Translates to: ASLVPPSALGKYRERRAGVCAPR*TRTATI Trigger: GATGGTAGCAGTGCGTGTGCAGCGTGGGGCACAGAC...CCCTGCCCTCCTCTCCCTATACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR GCA 90 bp | GCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTATAGGGAGAGGAGGGCAGGGCACTGGCTCAGCCGATaGTCCTGGAATTCCTCCCGG | + |
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Preference number: 4 (lower is better) Translates to: ASLVPPSALGKYRERRAGHWLSR*SWNSSR Trigger: CCGGGAGGAATTCCAGGAGCATCGGCTGAGCCAGTG...CCCTGCCCTCCTCTCCCTATACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR GCA 90 bp | GCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTATAGGGAGAGGAGGGCAGGGGCCTGGCATGTCCGCTaGACCTGCTCAATGCACGGA | + |
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Preference number: 4 (lower is better) Translates to: ASLVPPSALGKYRERRAGAWHVR*TCSMHG Trigger: TCCGTGCATTGAGCAGGTGCAGCGGACATGCCAGGC...CCCTGCCCTCCTCTCCCTATACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | AGGGCAGTGGCTGACCATATAAGGCAGCCTCTGGCCTCCCTGCCTGCTTGCCTGAGGATCTGCGTGCGGTaGGGCAGGTTCACTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: RAVADHIRQPLASLPACLRICVR*GRFTVQ Trigger: CTGGACAGTGAACCTGCCCCACCGCACGCAGATCCT...CAGGCAAGCAGGCAGGGAGGCCAGAGGCTGCCTTATATGGTCAGCCACTGCCCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTATAGGGAGAGGAGGGCAGGGTGCACAGTCACCCACTaGCTCAGCCGATGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: ASLVPPSALGKYRERRAGCTVTH*LSRCSW Trigger: CCAGGAGCATCGGCTGAGCCAGTGGGTGACTGTGCA...CCCTGCCCTCCTCTCCCTATACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR GCA 90 bp | CACATGTGGCAAGTCCACAGCCAGGCTCTTAGCCCATGCACAGGCTCCTCTATGTGCCTCAGGACGCCATaGCGGGTCTGGGTCTGTGCC | + |
|
Preference number: 4 (lower is better) Translates to: HMWQVHSQALSPCTGSSMCLRTP*RVWVCA Trigger: GGCACAGACCCAGACCCGGCATGGCGTCCTGAGGCA...CATAGAGGAGCCTGTGCATGGGCTAAGAGCCTGGCTGTGGACTTGCCACATGTG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTATAGGGAGAGGAGGGCAGGGCACCTTGGAGCCAAATaGGCGGCCAATGAGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: ASLVPPSALGKYRERRAGHLGAK*AANEVH Trigger: GTGGACCTCATTGGCCGCCCATTTGGCTCCAAGGTG...CCCTGCCCTCCTCTCCCTATACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCAGTGGCTGACCATATAAGGCAGCCTCTGGCCTCCCTGCCTGCTTGCCTGGCTCCAGCATCATGGTaGTCAAGGCAATGTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: RAVADHIRQPLASLPACLAPASW*SRQCRW Trigger: CCACCGACATTGCCTTGATCACCATGATGCTGGAGC...CAGGCAAGCAGGCAGGGAGGCCAGAGGCTGCCTTATATGGTCAGCCACTGCCCT 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR TCA 90 bp | CACATGTGGCAAGTCCACAGCCAGGCTCTTAGCCCATGCACAGGCTCCTCTATGGCCCACCTTCAACCTTaGGGGCATCCCAGGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: HMWQVHSQALSPCTGSSMAHLQP*GHPRHG Trigger: GCCATGCCTGGGATGCCCTCAAGGTTGAAGGTGGGC...CATAGAGGAGCCTGTGCATGGGCTAAGAGCCTGGCTGTGGACTTGCCACATGTG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR TCA 90 bp | AGGGCAGTGGCTGACCATATAAGGCAGCCTCTGGCCTCCCTGCCTGCTTGCCTGCACAGCTTCCCAGGGTaGTGGGATATCCAAGAAGAC | + |
|
Preference number: 4 (lower is better) Translates to: RAVADHIRQPLASLPACLHSFPG*WDIQED Trigger: GTCTTCTTGGATATCCCATCACCCTGGGAAGCTGTG...CAGGCAAGCAGGCAGGGAGGCCAGAGGCTGCCTTATATGGTCAGCCACTGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR GCA 90 bp | CGCTTTGACCCCAGCTCCAACAAGGACTGGAAGGTCACGGAAGCAGGGACCAATAGCTCAGGAGTGGGGTaGAGCACATACACCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: RFDPSSNKDWKVTEAGTNSSGVG*STYTQP Trigger: CGGCTGGGTGTATGTGCTGCACCCCACTCCTGAGCT...ATTGGTCCCTGCTTCCGTGACCTTCCAGTCCTTGTTGGAGCTGGGGTCAAAGCG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR GCA 90 bp | TCACCTCCTTTGTTCCTGGGCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTACACTGGCTCAGCCGATaGTCCTGGAATTCCTCCCGG | + |
|
Preference number: 4 (lower is better) Translates to: SPPLFLGQPGPSISLREVHWLSR*SWNSSR Trigger: CCGGGAGGAATTCCAGGAGCATCGGCTGAGCCAGTG...TACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGCCCAGGAACAAAGGAGGTGA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR CCA 90 bp | GCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTATAGGGAGAGGAGGGCAGGGTGCTGCAAATCACCTTaGAGCCAAATGGGCGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: ASLVPPSALGKYRERRAGCCKSP*SQMGGQ Trigger: TTGGCCGCCCATTTGGCTCCAAGGTGATTTGCAGCA...CCCTGCCCTCCTCTCCCTATACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR CCA 90 bp | CACATGTGGCAAGTCCACAGCCAGGCTCTTAGCCCATGCACAGGCTCCTCTATGAGCTCTGTGAAGCCATaGGCTGCCAGCGCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: HMWQVHSQALSPCTGSSMSSVKP*AASAWH Trigger: ATGCCAGGCGCTGGCAGCCCATGGCTTCACAGAGCT...CATAGAGGAGCCTGTGCATGGGCTAAGAGCCTGGCTGTGGACTTGCCACATGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR CCA 90 bp | AGGGCAGTGGCTGACCATATAAGGCAGCCTCTGGCCTCCCTGCCTGCTTGCCTGCACATTGTAGACCTGTaGCAGTACCTCCAGGGTGCT | + |
|
Preference number: 4 (lower is better) Translates to: RAVADHIRQPLASLPACLHIVDL*QYLQGA Trigger: AGCACCCTGGAGGTACTGCCACAGGTCTACAATGTG...CAGGCAAGCAGGCAGGGAGGCCAGAGGCTGCCTTATATGGTCAGCCACTGCCCT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR GCA 90 bp | TCACCTCCTTTGTTCCTGGGCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTACCCAGCCGCCTCTGCTaGAAATCACCTTGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SPPLFLGQPGPSISLREVPSRLC*KSPWSQ Trigger: TTGGCTCCAAGGTGATTTGCAGCAGAGGCGGCTGGG...TACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGCCCAGGAACAAAGGAGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR GCA 90 bp | CACATGTGGCAAGTCCACAGCCAGGCTCTTAGCCCATGCACAGGCTCCTCTATGTCTCCTTCATGGGTGTaGCACTACGGAAGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: HMWQVHSQALSPCTGSSMSPSWV*HYGRGW Trigger: CCAGCCCCTTCCGTAGTGGCACACCCATGAAGGAGA...CATAGAGGAGCCTGTGCATGGGCTAAGAGCCTGGCTGTGGACTTGCCACATGTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | CAAGGACTGGAAGGTCACGGAAGCAGGGACCAATCCTGCTGTGTTCTATCCCTCAGGATCTGCGTGCGGTaGGGCAGGTTCACTGTCCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGLEGHGSRDQSCCVLSLRICVR*GRFTVQ Trigger: CTGGACAGTGAACCTGCCCCACCGCACGCAGATCCT...GAGGGATAGAACACAGCAGGATTGGTCCCTGCTTCCGTGACCTTCCAGTCCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR CCA 90 bp | TCACCTCCTTTGTTCCTGGGCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTACTGCAGCACACATCCTaGGTGTGCACAGTCACCCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPPLFLGQPGPSISLREVLQHTS*VCTVTH Trigger: GTGGGTGACTGTGCACACCCAGGATGTGTGCTGCAG...TACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGCCCAGGAACAAAGGAGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR CCA 90 bp | CTGGGCTTTCTGGTTAATTTAGCTCAACCACAGCTTCTGGCTAAGCTCTGGAGCTGGGCTGCCAGCGCCTaGCATGTCCGCTGCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: LGFLVNLAQPQLLAKLWSWAASA*HVRCTC Trigger: GCAGGTGCAGCGGACATGCCAGGCGCTGGCAGCCCA...GCTCCAGAGCTTAGCCAGAAGCTGTGGTTGAGCTAAATTAACCAGAAAGCCCAG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | AGGGCAGTGGCTGACCATATAAGGCAGCCTCTGGCCTCCCTGCCTGCTTGCCTGCATCAGAGCCCATGTTaGTCTCTAAGTTGTTGGCCC | + |
|
Preference number: 4 (lower is better) Translates to: RAVADHIRQPLASLPACLHQSPC*SLSCWP Trigger: GGGCCAACAACTTAGAGACCAACATGGGCTCTGATG...CAGGCAAGCAGGCAGGGAGGCCAGAGGCTGCCTTATATGGTCAGCCACTGCCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR TCA 90 bp | TCACCTCCTTTGTTCCTGGGCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTAGCTCCAGCATCATGGTaGTCAAGGCAATGTCGGTGG | + |
|
Preference number: 4 (lower is better) Translates to: SPPLFLGQPGPSISLREVAPASW*SRQCRW Trigger: CCACCGACATTGCCTTGATCACCATGATGCTGGAGC...TACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGCCCAGGAACAAAGGAGGTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR GCA 90 bp | CAACAAGGACTGGAAGGTCACGGAAGCAGGGACCAATCCTGCTGTGTTCTATCCGTCTGTGCCCCACGCTaGACACGCACTGCTACCATC | + |
|
Preference number: 4 (lower is better) Translates to: QQGLEGHGSRDQSCCVLSVCAPR*TRTATI Trigger: GATGGTAGCAGTGCGTGTGCAGCGTGGGGCACAGAC...GGATAGAACACAGCAGGATTGGTCCCTGCTTCCGTGACCTTCCAGTCCTTGTTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | TATGGAGAGGAAAGACTCATGTTGACAACAAAGAGCCAGGACAGAGCTTGCGCTACGCCATGCCGGGTCTaGGTCTGTGCCCCACGCTGC | + |
|
Preference number: 4 (lower is better) Translates to: YGEERLMLTTKSQDRACATPCRV*VCAPRC Trigger: GCAGCGTGGGGCACAGACCCAGACCCGGCATGGCGT...AGCGCAAGCTCTGTCCTGGCTCTTTGTTGTCAACATGAGTCTTTCCTCTCCATA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR GCA 90 bp | AGCAGTGATGAAGTGGAGACTTCCCTCTCAGAAGACAGGAATGCCTCCCAGCTGCCCAGCCGCCTCTGCTaGAAATCACCTTGGAGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: SSDEVETSLSEDRNASQLPSRLC*KSPWSQ Trigger: TTGGCTCCAAGGTGATTTGCAGCAGAGGCGGCTGGG...CAGCTGGGAGGCATTCCTGTCTTCTGAGAGGGAAGTCTCCACTTCATCACTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR GCA 90 bp | CTGGGCTTTCTGGTTAATTTAGCTCAACCACAGCTTCTGGCTAAGCTCTGGAGCGCCTGGCATGTCCGCTaGACCTGCTCAATGCACGGA | + |
|
Preference number: 4 (lower is better) Translates to: LGFLVNLAQPQLLAKLWSAWHVR*TCSMHG Trigger: TCCGTGCATTGAGCAGGTGCAGCGGACATGCCAGGC...GCTCCAGAGCTTAGCCAGAAGCTGTGGTTGAGCTAAATTAACCAGAAAGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | CAAGGACTGGAAGGTCACGGAAGCAGGGACCAATCCTGCTGTGTTCTATCCCTCTCAAGGCAATGTCGGTaGAGTAGAGGATCTGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: QGLEGHGSRDQSCCVLSLSRQCR*SRGSAC Trigger: GCACGCAGATCCTCTACTCCACCGACATTGCCTTGA...GAGGGATAGAACACAGCAGGATTGGTCCCTGCTTCCGTGACCTTCCAGTCCTTG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | CTGGGCTTTCTGGTTAATTTAGCTCAACCACAGCTTCTGGCTAAGCTCTGGAGCCTCAGCCGATGCTCCTaGAATTCCTCCCGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: LGFLVNLAQPQLLAKLWSLSRCS*NSSRAL Trigger: CAAGGCCCGGGAGGAATTCCAGGAGCATCGGCTGAG...GCTCCAGAGCTTAGCCAGAAGCTGTGGTTGAGCTAAATTAACCAGAAAGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | CTGGGCTTTCTGGTTAATTTAGCTCAACCACAGCTTCTGGCTAAGCTCTGGAGCTGCACAGTCACCCACTaGCTCAGCCGATGCTCCTGG | + |
|
Preference number: 4 (lower is better) Translates to: LGFLVNLAQPQLLAKLWSCTVTH*LSRCSW Trigger: CCAGGAGCATCGGCTGAGCCAGTGGGTGACTGTGCA...GCTCCAGAGCTTAGCCAGAAGCTGTGGTTGAGCTAAATTAACCAGAAAGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | AGCAGTGATGAAGTGGAGACTTCCCTCTCAGAAGACAGGAATGCCTCCCAGCTGTCAAGGCAATGTCGGTaGAGTAGAGGATCTGCGTGC | + |
|
Preference number: 4 (lower is better) Translates to: SSDEVETSLSEDRNASQLSRQCR*SRGSAC Trigger: GCACGCAGATCCTCTACTCCACCGACATTGCCTTGA...CAGCTGGGAGGCATTCCTGTCTTCTGAGAGGGAAGTCTCCACTTCATCACTGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | GTGGGGAAAATATTTATTATCCTTTGGGTGCCCTCGGGTATGACATATGACAGTTGGGCTGCCAGCGCCTaGCATGTCCGCTGCACCTGC | + |
|
Preference number: 4 (lower is better) Translates to: VGKIFIILWVPSGMTYDSWAASA*HVRCTC Trigger: GCAGGTGCAGCGGACATGCCAGGCGCTGGCAGCCCA...ACTGTCATATGTCATACCCGAGGGCACCCAAAGGATAATAAATATTTTCCCCAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR TCA 90 bp | CTGGGCTTTCTGGTTAATTTAGCTCAACCACAGCTTCTGGCTAAGCTCTGGAGCCTGTGTCGCCTTCCTTaGTCAGCTCCTCGTATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGFLVNLAQPQLLAKLWSLCRLP*SAPRMP Trigger: TGGCATACGAGGAGCTGATCAAGGAAGGCGACACAG...GCTCCAGAGCTTAGCCAGAAGCTGTGGTTGAGCTAAATTAACCAGAAAGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | TATGGAGAGGAAAGACTCATGTTGACAACAAAGAGCCAGGACAGAGCTTGCGCTTCCAGAGCTCAGGAGTaGGGTGCAGCACATACACCC | + |
|
Preference number: 4 (lower is better) Translates to: YGEERLMLTTKSQDRACASRAQE*GAAHTP Trigger: GGGTGTATGTGCTGCACCCCACTCCTGAGCTCTGGA...AGCGCAAGCTCTGTCCTGGCTCTTTGTTGTCAACATGAGTCTTTCCTCTCCATA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | CTGGGCTTTCTGGTTAATTTAGCTCAACCACAGCTTCTGGCTAAGCTCTGGAGCCCACAGTCTCCTTCATaGGTGTGCCACTACGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: LGFLVNLAQPQLLAKLWSPQSPS*VCHYGR Trigger: CCTTCCGTAGTGGCACACCCATGAAGGAGACTGTGG...GCTCCAGAGCTTAGCCAGAAGCTGTGGTTGAGCTAAATTAACCAGAAAGCCCAG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR TCA 90 bp | TTTAGTCTCAAAACCCAGGAAGGACTATGGAGAGGAAAGACTCATGTTGACAACGCCCACCTTCAACCTTaGGGGCATCCCAGGCATGGC | + |
|
Preference number: 4 (lower is better) Translates to: FSLKTQEGLWRGKTHVDNAHLQP*GHPRHG Trigger: GCCATGCCTGGGATGCCCTCAAGGTTGAAGGTGGGC...GTTGTCAACATGAGTCTTTCCTCTCCATAGTCCTTCCTGGGTTTTGAGACTAAA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR GCA 90 bp | GTGGGGAAAATATTTATTATCCTTTGGGTGCCCTCGGGTATGACATATGACAGTTGTGAAGCCATGGGCTaGCAGCGCCTGGCATGTCCG | + |
|
Preference number: 4 (lower is better) Translates to: VGKIFIILWVPSGMTYDSCEAMG*QRLACP Trigger: CGGACATGCCAGGCGCTGGCAGCCCATGGCTTCACA...ACTGTCATATGTCATACCCGAGGGCACCCAAAGGATAATAAATATTTTCCCCAC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR CCA 90 bp | TATGGAGAGGAAAGACTCATGTTGACAACAAAGAGCCAGGACAGAGCTTGCGCTCCACAGTCTCCTTCATaGGTGTGCCACTACGGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: YGEERLMLTTKSQDRACAPQSPS*VCHYGR Trigger: CCTTCCGTAGTGGCACACCCATGAAGGAGACTGTGG...AGCGCAAGCTCTGTCCTGGCTCTTTGTTGTCAACATGAGTCTTTCCTCTCCATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGGAAAATATTTATTATCCTTTGGGTGCCCTCGGGTATGACATATGACAGTGCTACCATCGAGCCGTaGCCCAGTGACAGGATGGCT | + |
|
Preference number: 4 (lower is better) Translates to: VGKIFIILWVPSGMTYDSATIEP*PSDRMA Trigger: AGCCATCCTGTCACTGGGGCACGGCTCGATGGTAGC...ACTGTCATATGTCATACCCGAGGGCACCCAAAGGATAATAAATATTTTCCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGGAAAATATTTATTATCCTTTGGGTGCCCTCGGGTATGACATATGACAGTAGCTCAGGAGTGGGGTaGAGCACATACACCCAGCCG | + |
|
Preference number: 4 (lower is better) Translates to: VGKIFIILWVPSGMTYDSSSGVG*STYTQP Trigger: CGGCTGGGTGTATGTGCTGCACCCCACTCCTGAGCT...ACTGTCATATGTCATACCCGAGGGCACCCAAAGGATAATAAATATTTTCCCCAC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR CCA 90 bp | TTTAGTCTCAAAACCCAGGAAGGACTATGGAGAGGAAAGACTCATGTTGACAACCTCAGCCGATGCTCCTaGAATTCCTCCCGGGCCTTG | + |
|
Preference number: 4 (lower is better) Translates to: FSLKTQEGLWRGKTHVDNLSRCS*NSSRAL Trigger: CAAGGCCCGGGAGGAATTCCAGGAGCATCGGCTGAG...GTTGTCAACATGAGTCTTTCCTCTCCATAGTCCTTCCTGGGTTTTGAGACTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR CCA 90 bp | TTTAGTCTCAAAACCCAGGAAGGACTATGGAGAGGAAAGACTCATGTTGACAACAGCTCTGTGAAGCCATaGGCTGCCAGCGCCTGGCAT | + |
|
Preference number: 4 (lower is better) Translates to: FSLKTQEGLWRGKTHVDNSSVKP*AASAWH Trigger: ATGCCAGGCGCTGGCAGCCCATGGCTTCACAGAGCT...GTTGTCAACATGAGTCTTTCCTCTCCATAGTCCTTCCTGGGTTTTGAGACTAAA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| 3UTR CAA 72 bp | AAACCCAGGAAGGACTATGGAGAGGAAAGACTCATGTaGACAACAAAGAGCCAGGACAGAGCTTGCGCTGAG | + |
|
Preference number: 4 (lower is better) Translates to: KPRKDYGEERLM*TTKSQDRACAE Trigger: CTCAGCGCAAGCTCTGTCCTGGCTCTTTGTTGTCAACATGAGTCTTTCCTCTCCATAGTCCTTCCTGGGTTT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR GCA 90 bp | TTTAGTCTCAAAACCCAGGAAGGACTATGGAGAGGAAAGACTCATGTTGACAACAGTAGAGGATCTGCGTaGGGTGGGGCAGGTTCACTG | + |
|
Preference number: 4 (lower is better) Translates to: FSLKTQEGLWRGKTHVDNSRGSA*GGAGSL Trigger: CAGTGAACCTGCCCCACCGCACGCAGATCCTCTACT...GTTGTCAACATGAGTCTTTCCTCTCCATAGTCCTTCCTGGGTTTTGAGACTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGGAAAATATTTATTATCCTTTGGGTGCCCTCGGGTATGACATATGACAGTCACACATCCTGGGTGTaGACAGTCACCCACTGGCTC | + |
|
Preference number: 4 (lower is better) Translates to: VGKIFIILWVPSGMTYDSHTSWV*TVTHWL Trigger: GAGCCAGTGGGTGACTGTGCACACCCAGGATGTGTG...ACTGTCATATGTCATACCCGAGGGCACCCAAAGGATAATAAATATTTTCCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR GCA 90 bp | GTGGGGAAAATATTTATTATCCTTTGGGTGCCCTCGGGTATGACATATGACAGTTCTCCTTCATGGGTGTaGCACTACGGAAGGGGCTGG | + |
|
Preference number: 4 (lower is better) Translates to: VGKIFIILWVPSGMTYDSSPSWV*HYGRGW Trigger: CCAGCCCCTTCCGTAGTGGCACACCCATGAAGGAGA...ACTGTCATATGTCATACCCGAGGGCACCCAAAGGATAATAAATATTTTCCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR CCA 90 bp | GTGGGGAAAATATTTATTATCCTTTGGGTGCCCTCGGGTATGACATATGACAGTCACCTTGGAGCCAAATaGGCGGCCAATGAGGTCCAC | + |
|
Preference number: 4 (lower is better) Translates to: VGKIFIILWVPSGMTYDSHLGAK*AANEVH Trigger: GTGGACCTCATTGGCCGCCCATTTGGCTCCAAGGTG...ACTGTCATATGTCATACCCGAGGGCACCCAAAGGATAATAAATATTTTCCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
||
| CDS-3UTR CCA 90 bp | TTTAGTCTCAAAACCCAGGAAGGACTATGGAGAGGAAAGACTCATGTTGACAACTCCAGAGCTCAGGAGTaGGGTGCAGCACATACACCC | + |
|
Preference number: 4 (lower is better) Translates to: FSLKTQEGLWRGKTHVDNSRAQE*GAAHTP Trigger: GGGTGTATGTGCTGCACCCCACTCCTGAGCTCTGGA...GTTGTCAACATGAGTCTTTCCTCTCCATAGTCCTTCCTGGGTTTTGAGACTAAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | GTGGGGAAAATATTTATTATCCTTTGGGTGCCCTCGGGTATGACATATGACAGTCTGCAGCACACATCCTaGGTGTGCACAGTCACCCAC | + |
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Preference number: 4 (lower is better) Translates to: VGKIFIILWVPSGMTYDSLQHTS*VCTVTH Trigger: GTGGGTGACTGTGCACACCCAGGATGTGTGCTGCAG...ACTGTCATATGTCATACCCGAGGGCACCCAAAGGATAATAAATATTTTCCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | GTGGGGAAAATATTTATTATCCTTTGGGTGCCCTCGGGTATGACATATGACAGTCACTACGGAAGGGGCTaGCATCAGAGCCCATGTTGG | + |
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Preference number: 4 (lower is better) Translates to: VGKIFIILWVPSGMTYDSHYGRG*HQSPCW Trigger: CCAACATGGGCTCTGATGCCAGCCCCTTCCGTAGTG...ACTGTCATATGTCATACCCGAGGGCACCCAAAGGATAATAAATATTTTCCCCAC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR TCA 90 bp | TTTAGTCTCAAAACCCAGGAAGGACTATGGAGAGGAAAGACTCATGTTGACAACCTGTGTCGCCTTCCTTaGTCAGCTCCTCGTATGCCA | + |
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Preference number: 4 (lower is better) Translates to: FSLKTQEGLWRGKTHVDNLCRLP*SAPRMP Trigger: TGGCATACGAGGAGCTGATCAAGGAAGGCGACACAG...GTTGTCAACATGAGTCTTTCCTCTCCATAGTCCTTCCTGGGTTTTGAGACTAAA 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | AACTTTTACCATTTAGTCTCAAAACCCAGGAAGGACTATGGAGAGGAAAGACTCCACTACGGAAGGGGCTaGCATCAGAGCCCATGTTGG | + |
|
Preference number: 4 (lower is better) Translates to: NFYHLVSKPRKDYGEERLHYGRG*HQSPCW Trigger: CCAACATGGGCTCTGATGCCAGCCCCTTCCGTAGTG...GAGTCTTTCCTCTCCATAGTCCTTCCTGGGTTTTGAGACTAAATGGTAAAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | TTTAGTCTCAAAACCCAGGAAGGACTATGGAGAGGAAAGACTCATGTTGACAACTGCTGCAAATCACCTTaGAGCCAAATGGGCGGCCAA | + |
|
Preference number: 4 (lower is better) Translates to: FSLKTQEGLWRGKTHVDNCCKSP*SQMGGQ Trigger: TTGGCCGCCCATTTGGCTCCAAGGTGATTTGCAGCA...GTTGTCAACATGAGTCTTTCCTCTCCATAGTCCTTCCTGGGTTTTGAGACTAAA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | GTGGGGAAAATATTTATTATCCTTTGGGTGCCCTCGGGTATGACATATGACAGTCACATTGTAGACCTGTaGCAGTACCTCCAGGGTGCT | + |
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Preference number: 4 (lower is better) Translates to: VGKIFIILWVPSGMTYDSHIVDL*QYLQGA Trigger: AGCACCCTGGAGGTACTGCCACAGGTCTACAATGTG...ACTGTCATATGTCATACCCGAGGGCACCCAAAGGATAATAAATATTTTCCCCAC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CCA 90 bp | AACTTTTACCATTTAGTCTCAAAACCCAGGAAGGACTATGGAGAGGAAAGACTCCATCAGAGCCCATGTTaGTCTCTAAGTTGTTGGCCC | + |
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Preference number: 4 (lower is better) Translates to: NFYHLVSKPRKDYGEERLHQSPC*SLSCWP Trigger: GGGCCAACAACTTAGAGACCAACATGGGCTCTGATG...GAGTCTTTCCTCTCCATAGTCCTTCCTGGGTTTTGAGACTAAATGGTAAAAGTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS GCA 90 bp | GAGGTCCACCGAGTGCCTCAGGACGCCATGCCGGGTCTGGGTCTGTaGCCCACGCTGCACACGCACTGCTACCATCGAGCCGTGCCCCAG | + |
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Preference number: 5 (lower is better) Translates to: EVHRVPQDAMPGLGL*PTLHTHCYHRAVPQ Trigger: CTGGGGCACGGCTCGATGGTAGCAGTGCGTGTGCAGCGTGGGGCACAGACCCAGACCCGGCATGGCGTCCTGAGGCACTCGGTGGACCTC 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS CCA 90 bp | CGGCCAATGAGGTCCACCGAGTGCCTCAGGACGCCATGCCGGGTCTaGGTCTGTGCCCCACGCTGCACACGCACTGCTACCATCGAGCCG | + |
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Preference number: 5 (lower is better) Translates to: RPMRSTECLRTPCRV*VCAPRCTRTATIEP Trigger: CGGCTCGATGGTAGCAGTGCGTGTGCAGCGTGGGGCACAGACCCAGACCCGGCATGGCGTCCTGAGGCACTCGGTGGACCTCATTGGCCG 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS GCA 90 bp | GAGTGCCTCAGGACGCCATGCCGGGTCTGGGTCTGTGCCCCACGCTaGACACGCACTGCTACCATCGAGCCGTGCCCCAGTGACAGGATG | + |
|
Preference number: 5 (lower is better) Translates to: ECLRTPCRVWVCAPR*TRTATIEPCPSDRM Trigger: CATCCTGTCACTGGGGCACGGCTCGATGGTAGCAGTGCGTGTGCAGCGTGGGGCACAGACCCAGACCCGGCATGGCGTCCTGAGGCACTC 67% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS GCA 90 bp | CCAAATGGGCGGCCAATGAGGTCCACCGAGTGCCTCAGGACGCCATaGCGGGTCTGGGTCTGTGCCCCACGCTGCACACGCACTGCTACC | + |
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Preference number: 5 (lower is better) Translates to: PNGRPMRSTECLRTP*RVWVCAPRCTRTAT Trigger: GGTAGCAGTGCGTGTGCAGCGTGGGGCACAGACCCAGACCCGGCATGGCGTCCTGAGGCACTCGGTGGACCTCATTGGCCGCCCATTTGG 67% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS GCA 90 bp | CAAATCACCTTGGAGCCAAATGGGCGGCCAATGAGGTCCACCGAGTaGCTCAGGACGCCATGCCGGGTCTGGGTCTGTGCCCCACGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QITLEPNGRPMRSTE*LRTPCRVWVCAPRC Trigger: GCAGCGTGGGGCACAGACCCAGACCCGGCATGGCGTCCTGAGGCACTCGGTGGACCTCATTGGCCGCCCATTTGGCTCCAAGGTGATTTG 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS GCA 90 bp | CAGCACACATCCTGGGTGTGCACAGTCACCCACTGGCTCAGCCGATaGTCCTGGAATTCCTCCCGGGCCTTGTCCGCCCGTTGCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: QHTSWVCTVTHWLSR*SWNSSRALSARCWW Trigger: CCACCAGCAACGGGCGGACAAGGCCCGGGAGGAATTCCAGGAGCATCGGCTGAGCCAGTGGGTGACTGTGCACACCCAGGATGTGTGCTG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS CCA 90 bp | CGATGCTCCTGGAATTCCTCCCGGGCCTTGTCCGCCCGTTGCTGGTaGAACTCTACTGTGTGTAGGTGGCCAGTGGGGGCAACGCTGCGG | + |
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Preference number: 5 (lower is better) Translates to: RCSWNSSRALSARCW*NSTVCRWPVGATLR Trigger: CCGCAGCGTTGCCCCCACTGGCCACCTACACACAGTAGAGTTCCACCAGCAACGGGCGGACAAGGCCCGGGAGGAATTCCAGGAGCATCG 64% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS CCA 90 bp | CCGAAGCCACTGCAGCACACATCCTGGGTGTGCACAGTCACCCACTaGCTCAGCCGATGCTCCTGGAATTCCTCCCGGGCCTTGTCCGCC | + |
|
Preference number: 5 (lower is better) Translates to: PKPLQHTSWVCTVTH*LSRCSWNSSRALSA Trigger: GGCGGACAAGGCCCGGGAGGAATTCCAGGAGCATCGGCTGAGCCAGTGGGTGACTGTGCACACCCAGGATGTGTGCTGCAGTGGCTTCGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS-3UTR CAA 90 bp | GCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTATAGGGAGAGGAGGGCAGGGAATTCCTCCCGGGCCTaGTCCGCCCGTTGCTGGTGG | + |
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Preference number: 5 (lower is better) Translates to: ASLVPPSALGKYRERRAGNSSRA*SARCWW Trigger: CCACCAGCAACGGGCGGACAAGGCCCGGGAGGAATT...CCCTGCCCTCCTCTCCCTATACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGC 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CAA 90 bp | AGGGCAGTGGCTGACCATATAAGGCAGCCTCTGGCCTCCCTGCCTGCTTGCCTGAATTCCTCCCGGGCCTaGTCCGCCCGTTGCTGGTGG | + |
|
Preference number: 5 (lower is better) Translates to: RAVADHIRQPLASLPACLNSSRA*SARCWW Trigger: CCACCAGCAACGGGCGGACAAGGCCCGGGAGGAATT...CAGGCAAGCAGGCAGGGAGGCCAGAGGCTGCCTTATATGGTCAGCCACTGCCCT 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS TCA 90 bp | AGCCGCCTCTGCTGCAAATCACCTTGGAGCCAAATGGGCGGCCAATaGGGTCCACCGAGTGCCTCAGGACGCCATGCCGGGTCTGGGTCT | + |
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Preference number: 5 (lower is better) Translates to: SRLCCKSPWSQMGGQ*GPPSASGRHAGSGS Trigger: AGACCCAGACCCGGCATGGCGTCCTGAGGCACTCGGTGGACCTCATTGGCCGCCCATTTGGCTCCAAGGTGATTTGCAGCAGAGGCGGCT 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS GCA 90 bp | TGGGTCTGTGCCCCACGCTGCACACGCACTGCTACCATCGAGCCGTaGCCCAGTGACAGGATGGCTGTGTCGCCTTCCTTGATCAGCTCC | + |
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Preference number: 5 (lower is better) Translates to: WVCAPRCTRTATIEP*PSDRMAVSPSLISS Trigger: GGAGCTGATCAAGGAAGGCGACACAGCCATCCTGTCACTGGGGCACGGCTCGATGGTAGCAGTGCGTGTGCAGCGTGGGGCACAGACCCA 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS GCA 90 bp | CTCAGCCGATGCTCCTGGAATTCCTCCCGGGCCTTGTCCGCCCGTTaGTGGTGGAACTCTACTGTGTGTAGGTGGCCAGTGGGGGCAACG | + |
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Preference number: 5 (lower is better) Translates to: LSRCSWNSSRALSAR*WWNSTVCRWPVGAT Trigger: CGTTGCCCCCACTGGCCACCTACACACAGTAGAGTTCCACCAGCAACGGGCGGACAAGGCCCGGGAGGAATTCCAGGAGCATCGGCTGAG 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS CCA 90 bp | AGCCGATGCTCCTGGAATTCCTCCCGGGCCTTGTCCGCCCGTTGCTaGTGGAACTCTACTGTGTGTAGGTGGCCAGTGGGGGCAACGCTG | + |
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Preference number: 5 (lower is better) Translates to: SRCSWNSSRALSARC*WNSTVCRWPVGATL Trigger: CAGCGTTGCCCCCACTGGCCACCTACACACAGTAGAGTTCCACCAGCAACGGGCGGACAAGGCCCGGGAGGAATTCCAGGAGCATCGGCT 63% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS TCA 90 bp | TGCCCCACGCTGCACACGCACTGCTACCATCGAGCCGTGCCCCAGTaGCAGGATGGCTGTGTCGCCTTCCTTGATCAGCTCCTCGTATGC | + |
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Preference number: 5 (lower is better) Translates to: CPTLHTHCYHRAVPQ*QDGCVAFLDQLLVC Trigger: GCATACGAGGAGCTGATCAAGGAAGGCGACACAGCCATCCTGTCACTGGGGCACGGCTCGATGGTAGCAGTGCGTGTGCAGCGTGGGGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS GCA 90 bp | TGCGTGCGGTGGGGCAGGTTCACTGTCCAGAGCTCAGGAGTGGGGTaGAGCACATACACCCAGCCGCCTCTGCTGCAAATCACCTTGGAG | + |
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Preference number: 5 (lower is better) Translates to: CVRWGRFTVQSSGVG*STYTQPPLLQITLE Trigger: CTCCAAGGTGATTTGCAGCAGAGGCGGCTGGGTGTATGTGCTGCACCCCACTCCTGAGCTCTGGACAGTGAACCTGCCCCACCGCACGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS CCA 90 bp | CACATACACCCAGCCGCCTCTGCTGCAAATCACCTTGGAGCCAAATaGGCGGCCAATGAGGTCCACCGAGTGCCTCAGGACGCCATGCCG | + |
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Preference number: 5 (lower is better) Translates to: HIHPAASAANHLGAK*AANEVHRVPQDAMP Trigger: CGGCATGGCGTCCTGAGGCACTCGGTGGACCTCATTGGCCGCCCATTTGGCTCCAAGGTGATTTGCAGCAGAGGCGGCTGGGTGTATGTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS CCA 90 bp | GGATCTGCGTGCGGTGGGGCAGGTTCACTGTCCAGAGCTCAGGAGTaGGGTGCAGCACATACACCCAGCCGCCTCTGCTGCAAATCACCT | + |
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Preference number: 5 (lower is better) Translates to: GSACGGAGSLSRAQE*GAAHTPSRLCCKSP Trigger: AGGTGATTTGCAGCAGAGGCGGCTGGGTGTATGTGCTGCACCCCACTCCTGAGCTCTGGACAGTGAACCTGCCCCACCGCACGCAGATCC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS CCA 90 bp | ACATCCTGGGTGTGCACAGTCACCCACTGGCTCAGCCGATGCTCCTaGAATTCCTCCCGGGCCTTGTCCGCCCGTTGCTGGTGGAACTCT | + |
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Preference number: 5 (lower is better) Translates to: TSWVCTVTHWLSRCS*NSSRALSARCWWNS Trigger: AGAGTTCCACCAGCAACGGGCGGACAAGGCCCGGGAGGAATTCCAGGAGCATCGGCTGAGCCAGTGGGTGACTGTGCACACCCAGGATGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS CCA 90 bp | ACCTCCAGGGTGCTAAGCTCTGTGAAGCCATGGGCTGCCAGCGCCTaGCATGTCCGCTGCACCTGCTCAATGCACGGAGAGAAGGAGCAG | + |
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Preference number: 5 (lower is better) Translates to: TSRVLSSVKPWAASA*HVRCTCSMHGEKEQ Trigger: CTGCTCCTTCTCTCCGTGCATTGAGCAGGTGCAGCGGACATGCCAGGCGCTGGCAGCCCATGGCTTCACAGAGCTTAGCACCCTGGAGGT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS GCA 90 bp | TCTGTGAAGCCATGGGCTGCCAGCGCCTGGCATGTCCGCTGCACCTaGTCAATGCACGGAGAGAAGGAGCAGAAACGCCCACCTTCAACC | + |
|
Preference number: 5 (lower is better) Translates to: SVKPWAASAWHVRCT*SMHGEKEQKRPPST Trigger: GGTTGAAGGTGGGCGTTTCTGCTCCTTCTCTCCGTGCATTGAGCAGGTGCAGCGGACATGCCAGGCGCTGGCAGCCCATGGCTTCACAGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS GCA 90 bp | CTAAGCTCTGTGAAGCCATGGGCTGCCAGCGCCTGGCATGTCCGCTaGACCTGCTCAATGCACGGAGAGAAGGAGCAGAAACGCCCACCT | + |
|
Preference number: 5 (lower is better) Translates to: LSSVKPWAASAWHVR*TCSMHGEKEQKRPP Trigger: AGGTGGGCGTTTCTGCTCCTTCTCTCCGTGCATTGAGCAGGTGCAGCGGACATGCCAGGCGCTGGCAGCCCATGGCTTCACAGAGCTTAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS CCA 90 bp | CGGGCCTTGTCCGCCCGTTGCTGGTGGAACTCTACTGTGTGTAGGTaGCCAGTGGGGGCAACGCTGCGGATGATTGCGTGGGATACAGAA | + |
|
Preference number: 5 (lower is better) Translates to: RALSARCWWNSTVCR*PVGATLRMIAWDTE Trigger: TTCTGTATCCCACGCAATCATCCGCAGCGTTGCCCCCACTGGCCACCTACACACAGTAGAGTTCCACCAGCAACGGGCGGACAAGGCCCG 61% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS-3UTR CAA 90 bp | AGGGCAGTGGCTGACCATATAAGGCAGCCTCTGGCCTCCCTGCCTGCTTGCCTGGCTGTGTCGCCTTCCTaGATCAGCTCCTCGTATGCC | + |
|
Preference number: 5 (lower is better) Translates to: RAVADHIRQPLASLPACLAVSPS*ISSSYA Trigger: GGCATACGAGGAGCTGATCAAGGAAGGCGACACAGC...CAGGCAAGCAGGCAGGGAGGCCAGAGGCTGCCTTATATGGTCAGCCACTGCCCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS GCA 90 bp | TATCCAAGAAGACAGCGTCAGCCACGTGGACCACACCGAAGCCACTaGAGCACACATCCTGGGTGTGCACAGTCACCCACTGGCTCAGCC | + |
|
Preference number: 5 (lower is better) Translates to: YPRRQRQPRGPHRSH*STHPGCAQSPTGSA Trigger: GGCTGAGCCAGTGGGTGACTGTGCACACCCAGGATGTGTGCTGCAGTGGCTTCGGTGTGGTCCACGTGGCTGACGCTGTCTTCTTGGATA 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS CCA 90 bp | CAGGTCGGGCAAGGGCAGACTGACAGTGCGCACATTGTAGACCTGTaGCAGTACCTCCAGGGTGCTAAGCTCTGTGAAGCCATGGGCTGC | + |
|
Preference number: 5 (lower is better) Translates to: QVGQGQTDSAHIVDL*QYLQGAKLCEAMGC Trigger: GCAGCCCATGGCTTCACAGAGCTTAGCACCCTGGAGGTACTGCCACAGGTCTACAATGTGCGCACTGTCAGTCTGCCCTTGCCCGACCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS TCA 90 bp | TTCAACCTTGAGGGCATCCCAGGCATGGCCCACAGCTTCCCAGGGTaGTGGGATATCCAAGAAGACAGCGTCAGCCACGTGGACCACACC | + |
|
Preference number: 5 (lower is better) Translates to: FNLEGIPGMAHSFPG*WDIQEDSVSHVDHT Trigger: GGTGTGGTCCACGTGGCTGACGCTGTCTTCTTGGATATCCCATCACCCTGGGAAGCTGTGGGCCATGCCTGGGATGCCCTCAAGGTTGAA 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS CCA 90 bp | TGTGGCCCACAGTCTCCTTCATGGGTGTGCCACTACGGAAGGGGCTaGCATCAGAGCCCATGTTGGTCTCTAAGTTGTTGGCCCCCAGGT | + |
|
Preference number: 5 (lower is better) Translates to: CGPQSPSWVCHYGRG*HQSPCWSLSCWPPG Trigger: ACCTGGGGGCCAACAACTTAGAGACCAACATGGGCTCTGATGCCAGCCCCTTCCGTAGTGGCACACCCATGAAGGAGACTGTGGGCCACA 59% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS TCA 90 bp | AACGCTGCGGATGATTGCGTGGGATACAGAACCACTGCCCGTGCCTaGTTCACAGACCACAGAACCGGGACGCAGCTCCAGCATCATGGT | + |
|
Preference number: 5 (lower is better) Translates to: NAADDCVGYRTTARA*FTDHRTGTQLQHHG Trigger: ACCATGATGCTGGAGCTGCGTCCCGGTTCTGTGGTCTGTGAATCAGGCACGGGCAGTGGTTCTGTATCCCACGCAATCATCCGCAGCGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS CCA 90 bp | AAGGAGCAGAAACGCCCACCTTCAACCTTGAGGGCATCCCAGGCATaGCCCACAGCTTCCCAGGGTGATGGGATATCCAAGAAGACAGCG | + |
|
Preference number: 5 (lower is better) Translates to: KEQKRPPSTLRASQA*PTASQGDGISKKTA Trigger: CGCTGTCTTCTTGGATATCCCATCACCCTGGGAAGCTGTGGGCCATGCCTGGGATGCCCTCAAGGTTGAAGGTGGGCGTTTCTGCTCCTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CAA 90 bp | TCACCTCCTTTGTTCCTGGGCCAGCCTGGTCCCTCCATCAGCCTTAGGGAAGTACTGCTGCAAATCACCTaGGAGCCAAATGGGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SPPLFLGQPGPSISLREVLLQIT*EPNGRP Trigger: TGGCCGCCCATTTGGCTCCAAGGTGATTTGCAGCAG...TACTTCCCTAAGGCTGATGGAGGGACCAGGCTGGCCCAGGAACAAAGGAGGTGA 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CAA 90 bp | AGCAGTGATGAAGTGGAGACTTCCCTCTCAGAAGACAGGAATGCCTCCCAGCTGGCTGTGTCGCCTTCCTaGATCAGCTCCTCGTATGCC | + |
|
Preference number: 5 (lower is better) Translates to: SSDEVETSLSEDRNASQLAVSPS*ISSSYA Trigger: GGCATACGAGGAGCTGATCAAGGAAGGCGACACAGC...CAGCTGGGAGGCATTCCTGTCTTCTGAGAGGGAAGTCTCCACTTCATCACTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CAA 90 bp | AGCAGTGATGAAGTGGAGACTTCCCTCTCAGAAGACAGGAATGCCTCCCAGCTGCTGCTGCAAATCACCTaGGAGCCAAATGGGCGGCCA | + |
|
Preference number: 5 (lower is better) Translates to: SSDEVETSLSEDRNASQLLLQIT*EPNGRP Trigger: TGGCCGCCCATTTGGCTCCAAGGTGATTTGCAGCAG...CAGCTGGGAGGCATTCCTGTCTTCTGAGAGGGAAGTCTCCACTTCATCACTGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS-3UTR CAA 90 bp | CTGGGCTTTCTGGTTAATTTAGCTCAACCACAGCTTCTGGCTAAGCTCTGGAGCGGCCTTGTCCGCCCGTaGCTGGTGGAACTCTACTGT | + |
|
Preference number: 5 (lower is better) Translates to: LGFLVNLAQPQLLAKLWSGLVRP*LVELYC Trigger: ACAGTAGAGTTCCACCAGCAACGGGCGGACAAGGCC...GCTCCAGAGCTTAGCCAGAAGCTGTGGTTGAGCTAAATTAACCAGAAAGCCCAG 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS GCA 72 bp | CGGCCAATGAGGTCCACCGAGTGCCTCAGGACGCCATaGCGGGTCTGGGTCTGTGCCCCACGCTGCACACGC | + |
|
Preference number: 6 (lower is better) Translates to: RPMRSTECLRTP*RVWVCAPRCTR Trigger: GCGTGTGCAGCGTGGGGCACAGACCCAGACCCGGCATGGCGTCCTGAGGCACTCGGTGGACCTCATTGGCCG 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS GCA 72 bp | AGGACGCCATGCCGGGTCTGGGTCTGTGCCCCACGCTaGACACGCACTGCTACCATCGAGCCGTGCCCCAGT | + |
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Preference number: 6 (lower is better) Translates to: RTPCRVWVCAPR*TRTATIEPCPS Trigger: ACTGGGGCACGGCTCGATGGTAGCAGTGCGTGTGCAGCGTGGGGCACAGACCCAGACCCGGCATGGCGTCCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS GCA 72 bp | CGAGTGCCTCAGGACGCCATGCCGGGTCTGGGTCTGTaGCCCACGCTGCACACGCACTGCTACCATCGAGCC | + |
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Preference number: 6 (lower is better) Translates to: RVPQDAMPGLGL*PTLHTHCYHRA Trigger: GGCTCGATGGTAGCAGTGCGTGTGCAGCGTGGGGCACAGACCCAGACCCGGCATGGCGTCCTGAGGCACTCG 68% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS CCA 72 bp | AGGTCCACCGAGTGCCTCAGGACGCCATGCCGGGTCTaGGTCTGTGCCCCACGCTGCACACGCACTGCTACC | + |
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Preference number: 6 (lower is better) Translates to: RSTECLRTPCRV*VCAPRCTRTAT Trigger: GGTAGCAGTGCGTGTGCAGCGTGGGGCACAGACCCAGACCCGGCATGGCGTCCTGAGGCACTCGGTGGACCT 68% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS GCA 72 bp | GCCCCACGCTGCACACGCACTGCTACCATCGAGCCGTaGCCCAGTGACAGGATGGCTGTGTCGCCTTCCTTG | + |
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Preference number: 6 (lower is better) Translates to: APRCTRTATIEP*PSDRMAVSPSL Trigger: CAAGGAAGGCGACACAGCCATCCTGTCACTGGGGCACGGCTCGATGGTAGCAGTGCGTGTGCAGCGTGGGGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS GCA 72 bp | TTGGAGCCAAATGGGCGGCCAATGAGGTCCACCGAGTaGCTCAGGACGCCATGCCGGGTCTGGGTCTGTGCC | + |
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Preference number: 6 (lower is better) Translates to: LEPNGRPMRSTE*LRTPCRVWVCA Trigger: GGCACAGACCCAGACCCGGCATGGCGTCCTGAGGCACTCGGTGGACCTCATTGGCCGCCCATTTGGCTCCAA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS GCA 72 bp | TCCTGGGTGTGCACAGTCACCCACTGGCTCAGCCGATaGTCCTGGAATTCCTCCCGGGCCTTGTCCGCCCGT | + |
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Preference number: 6 (lower is better) Translates to: SWVCTVTHWLSR*SWNSSRALSAR Trigger: ACGGGCGGACAAGGCCCGGGAGGAATTCCAGGAGCATCGGCTGAGCCAGTGGGTGACTGTGCACACCCAGGA 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS CCA 72 bp | TGCGGTGGGGCAGGTTCACTGTCCAGAGCTCAGGAGTaGGGTGCAGCACATACACCCAGCCGCCTCTGCTGC | + |
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Preference number: 6 (lower is better) Translates to: CGGAGSLSRAQE*GAAHTPSRLCC Trigger: GCAGCAGAGGCGGCTGGGTGTATGTGCTGCACCCCACTCCTGAGCTCTGGACAGTGAACCTGCCCCACCGCA 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS CCA 72 bp | GTGTGCACAGTCACCCACTGGCTCAGCCGATGCTCCTaGAATTCCTCCCGGGCCTTGTCCGCCCGTTGCTGG | + |
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Preference number: 6 (lower is better) Translates to: VCTVTHWLSRCS*NSSRALSARCW Trigger: CCAGCAACGGGCGGACAAGGCCCGGGAGGAATTCCAGGAGCATCGGCTGAGCCAGTGGGTGACTGTGCACAC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS CCA 72 bp | GGCAGTACCTCCAGGGTGCTAAGCTCTGTGAAGCCATaGGCTGCCAGCGCCTGGCATGTCCGCTGCACCTGC | + |
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Preference number: 6 (lower is better) Translates to: GSTSRVLSSVKP*AASAWHVRCTC Trigger: GCAGGTGCAGCGGACATGCCAGGCGCTGGCAGCCCATGGCTTCACAGAGCTTAGCACCCTGGAGGTACTGCC 65% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS GCA 72 bp | CCATGGGCTGCCAGCGCCTGGCATGTCCGCTGCACCTaGTCAATGCACGGAGAGAAGGAGCAGAAACGCCCA | + |
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Preference number: 6 (lower is better) Translates to: PWAASAWHVRCT*SMHGEKEQKRP Trigger: TGGGCGTTTCTGCTCCTTCTCTCCGTGCATTGAGCAGGTGCAGCGGACATGCCAGGCGCTGGCAGCCCATGG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS CCA 72 bp | CTGCAGCACACATCCTGGGTGTGCACAGTCACCCACTaGCTCAGCCGATGCTCCTGGAATTCCTCCCGGGCC | + |
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Preference number: 6 (lower is better) Translates to: LQHTSWVCTVTH*LSRCSWNSSRA Trigger: GGCCCGGGAGGAATTCCAGGAGCATCGGCTGAGCCAGTGGGTGACTGTGCACACCCAGGATGTGTGCTGCAG 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS CAA 90 bp | GTGGGGTGCAGCACATACACCCAGCCGCCTCTGCTGCAAATCACCTaGGAGCCAAATGGGCGGCCAATGAGGTCCACCGAGTGCCTCAGG | + |
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Preference number: 6 (lower is better) Translates to: VGCSTYTQPPLLQIT*EPNGRPMRSTECLR Trigger: CCTGAGGCACTCGGTGGACCTCATTGGCCGCCCATTTGGCTCCAAGGTGATTTGCAGCAGAGGCGGCTGGGTGTATGTGCTGCACCCCAC 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS TCA 72 bp | TGCTGCAAATCACCTTGGAGCCAAATGGGCGGCCAATaGGGTCCACCGAGTGCCTCAGGACGCCATGCCGGG | + |
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Preference number: 6 (lower is better) Translates to: CCKSPWSQMGGQ*GPPSASGRHAG Trigger: CCCGGCATGGCGTCCTGAGGCACTCGGTGGACCTCATTGGCCGCCCATTTGGCTCCAAGGTGATTTGCAGCA 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS CCA 72 bp | CCAGCCGCCTCTGCTGCAAATCACCTTGGAGCCAAATaGGCGGCCAATGAGGTCCACCGAGTGCCTCAGGAC | + |
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Preference number: 6 (lower is better) Translates to: PAASAANHLGAK*AANEVHRVPQD Trigger: GTCCTGAGGCACTCGGTGGACCTCATTGGCCGCCCATTTGGCTCCAAGGTGATTTGCAGCAGAGGCGGCTGG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS CCA 72 bp | TCCGCCCGTTGCTGGTGGAACTCTACTGTGTGTAGGTaGCCAGTGGGGGCAACGCTGCGGATGATTGCGTGG | + |
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Preference number: 6 (lower is better) Translates to: SARCWWNSTVCR*PVGATLRMIAW Trigger: CCACGCAATCATCCGCAGCGTTGCCCCCACTGGCCACCTACACACAGTAGAGTTCCACCAGCAACGGGCGGA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS CCA 72 bp | TGGAATTCCTCCCGGGCCTTGTCCGCCCGTTGCTGGTaGAACTCTACTGTGTGTAGGTGGCCAGTGGGGGCA | + |
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Preference number: 6 (lower is better) Translates to: WNSSRALSARCW*NSTVCRWPVGA Trigger: TGCCCCCACTGGCCACCTACACACAGTAGAGTTCCACCAGCAACGGGCGGACAAGGCCCGGGAGGAATTCCA 62% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS CCA 72 bp | TCCTGGAATTCCTCCCGGGCCTTGTCCGCCCGTTGCTaGTGGAACTCTACTGTGTGTAGGTGGCCAGTGGGG | + |
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Preference number: 6 (lower is better) Translates to: SWNSSRALSARC*WNSTVCRWPVG Trigger: CCCCACTGGCCACCTACACACAGTAGAGTTCCACCAGCAACGGGCGGACAAGGCCCGGGAGGAATTCCAGGA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS CCA 72 bp | GTGCTAAGCTCTGTGAAGCCATGGGCTGCCAGCGCCTaGCATGTCCGCTGCACCTGCTCAATGCACGGAGAG | + |
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Preference number: 6 (lower is better) Translates to: VLSSVKPWAASA*HVRCTCSMHGE Trigger: CTCTCCGTGCATTGAGCAGGTGCAGCGGACATGCCAGGCGCTGGCAGCCCATGGCTTCACAGAGCTTAGCAC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS TCA 72 bp | CTGCACACGCACTGCTACCATCGAGCCGTGCCCCAGTaGCAGGATGGCTGTGTCGCCTTCCTTGATCAGCTC | + |
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Preference number: 6 (lower is better) Translates to: LHTHCYHRAVPQ*QDGCVAFLDQL Trigger: GAGCTGATCAAGGAAGGCGACACAGCCATCCTGTCACTGGGGCACGGCTCGATGGTAGCAGTGCGTGTGCAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS GCA 72 bp | CAGGAGTGGGGTGCAGCACATACACCCAGCCGCCTCTaGTGCAAATCACCTTGGAGCCAAATGGGCGGCCAA | + |
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Preference number: 6 (lower is better) Translates to: QEWGAAHTPSRL*CKSPWSQMGGQ Trigger: TTGGCCGCCCATTTGGCTCCAAGGTGATTTGCAGCAGAGGCGGCTGGGTGTATGTGCTGCACCCCACTCCTG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 ENSMUST00000222737.2 |
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| CDS GCA 72 bp | TGCTCCTGGAATTCCTCCCGGGCCTTGTCCGCCCGTTaGTGGTGGAACTCTACTGTGTGTAGGTGGCCAGTG | + |
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Preference number: 6 (lower is better) Translates to: CSWNSSRALSAR*WWNSTVCRWPV Trigger: CACTGGCCACCTACACACAGTAGAGTTCCACCAGCAACGGGCGGACAAGGCCCGGGAGGAATTCCAGGAGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS GCA 72 bp | AGACAGCGTCAGCCACGTGGACCACACCGAAGCCACTaGAGCACACATCCTGGGTGTGCACAGTCACCCACT | + |
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Preference number: 6 (lower is better) Translates to: RQRQPRGPHRSH*STHPGCAQSPT Trigger: AGTGGGTGACTGTGCACACCCAGGATGTGTGCTGCAGTGGCTTCGGTGTGGTCCACGTGGCTGACGCTGTCT 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS GCA 72 bp | CTGCCAGCGCCTGGCATGTCCGCTGCACCTGCTCAATaGACGGAGAGAAGGAGCAGAAACGCCCACCTTCAA | + |
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Preference number: 6 (lower is better) Translates to: LPAPGMSAAPAQ*TERRSRNAHLQ Trigger: TTGAAGGTGGGCGTTTCTGCTCCTTCTCTCCGTGCATTGAGCAGGTGCAGCGGACATGCCAGGCGCTGGCAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS GCA 72 bp | GTGAAGCCATGGGCTGCCAGCGCCTGGCATGTCCGCTaGACCTGCTCAATGCACGGAGAGAAGGAGCAGAAA | + |
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Preference number: 6 (lower is better) Translates to: VKPWAASAWHVR*TCSMHGEKEQK Trigger: TTTCTGCTCCTTCTCTCCGTGCATTGAGCAGGTGCAGCGGACATGCCAGGCGCTGGCAGCCCATGGCTTCAC 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS CAA 72 bp | TGGCTCAGCCGATGCTCCTGGAATTCCTCCCGGGCCTaGTCCGCCCGTTGCTGGTGGAACTCTACTGTGTGT | + |
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Preference number: 6 (lower is better) Translates to: WLSRCSWNSSRA*SARCWWNSTVC Trigger: ACACACAGTAGAGTTCCACCAGCAACGGGCGGACAAGGCCCGGGAGGAATTCCAGGAGCATCGGCTGAGCCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS CAA 72 bp | GTGCCACTACGGAAGGGGCTGGCATCAGAGCCCATGTaGGTCTCTAAGTTGTTGGCCCCCAGGTCGGGCAAG | + |
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Preference number: 6 (lower is better) Translates to: VPLRKGLASEPM*VSKLLAPRSGK Trigger: CTTGCCCGACCTGGGGGCCAACAACTTAGAGACCAACATGGGCTCTGATGCCAGCCCCTTCCGTAGTGGCAC 61% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS CAA 90 bp | CTACGGAAGGGGCTGGCATCAGAGCCCATGTTGGTCTCTAAGTTGTaGGCCCCCAGGTCGGGCAAGGGCAGACTGACAGTGCGCACATTG | + |
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Preference number: 6 (lower is better) Translates to: LRKGLASEPMLVSKL*APRSGKGRLTVRTL Trigger: CAATGTGCGCACTGTCAGTCTGCCCTTGCCCGACCTGGGGGCCAACAACTTAGAGACCAACATGGGCTCTGATGCCAGCCCCTTCCGTAG 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS CAA 90 bp | TTCATGGGTGTGCCACTACGGAAGGGGCTGGCATCAGAGCCCATGTaGGTCTCTAAGTTGTTGGCCCCCAGGTCGGGCAAGGGCAGACTG | + |
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Preference number: 6 (lower is better) Translates to: FMGVPLRKGLASEPM*VSKLLAPRSGKGRL Trigger: CAGTCTGCCCTTGCCCGACCTGGGGGCCAACAACTTAGAGACCAACATGGGCTCTGATGCCAGCCCCTTCCGTAGTGGCACACCCATGAA 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS CAA 72 bp | AAGGGGCTGGCATCAGAGCCCATGTTGGTCTCTAAGTaGTTGGCCCCCAGGTCGGGCAAGGGCAGACTGACA | + |
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Preference number: 6 (lower is better) Translates to: KGLASEPMLVSK*LAPRSGKGRLT Trigger: TGTCAGTCTGCCCTTGCCCGACCTGGGGGCCAACAACTTAGAGACCAACATGGGCTCTGATGCCAGCCCCTT 60% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS TCA 72 bp | GATGATTGCGTGGGATACAGAACCACTGCCCGTGCCTaGTTCACAGACCACAGAACCGGGACGCAGCTCCAG | + |
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Preference number: 6 (lower is better) Translates to: DDCVGYRTTARA*FTDHRTGTQLQ Trigger: CTGGAGCTGCGTCCCGGTTCTGTGGTCTGTGAATCAGGCACGGGCAGTGGTTCTGTATCCCACGCAATCATC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 ENSMUST00000221089.2 |
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| CDS TCA 72 bp | CTAAGTTGTTGGCCCCCAGGTCGGGCAAGGGCAGACTaGCAGTGCGCACATTGTAGACCTGTGGCAGTACCT | + |
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Preference number: 6 (lower is better) Translates to: LSCWPPGRARAD*QCAHCRPVAVP Trigger: AGGTACTGCCACAGGTCTACAATGTGCGCACTGTCAGTCTGCCCTTGCCCGACCTGGGGGCCAACAACTTAG 58% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS CCA 72 bp | AAACGCCCACCTTCAACCTTGAGGGCATCCCAGGCATaGCCCACAGCTTCCCAGGGTGATGGGATATCCAAG | + |
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Preference number: 6 (lower is better) Translates to: KRPPSTLRASQA*PTASQGDGISK Trigger: CTTGGATATCCCATCACCCTGGGAAGCTGTGGGCCATGCCTGGGATGCCCTCAAGGTTGAAGGTGGGCGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS CCA 72 bp | CAAGGGCAGACTGACAGTGCGCACATTGTAGACCTGTaGCAGTACCTCCAGGGTGCTAAGCTCTGTGAAGCC | + |
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Preference number: 6 (lower is better) Translates to: QGQTDSAHIVDL*QYLQGAKLCEA Trigger: GGCTTCACAGAGCTTAGCACCCTGGAGGTACTGCCACAGGTCTACAATGTGCGCACTGTCAGTCTGCCCTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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| CDS CCA 72 bp | CAGTCTCCTTCATGGGTGTGCCACTACGGAAGGGGCTaGCATCAGAGCCCATGTTGGTCTCTAAGTTGTTGG | + |
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Preference number: 6 (lower is better) Translates to: QSPSWVCHYGRG*HQSPCWSLSCW Trigger: CCAACAACTTAGAGACCAACATGGGCTCTGATGCCAGCCCCTTCCGTAGTGGCACACCCATGAAGGAGACTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000084947.10 ENSMUST00000168338.2 |
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