Pregenerated sensors for TRMT5 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000034442Ensembl transcript IDs: ENSMUST00000116420.4, ENSMUST00000220701.2, ENSMUST00000221189.2
Found 97 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | CACGTTGTTCCTAGGCAGGCTCAGGCTATCAGGCTTGGCAGCAAGTaGCTTCACCCAGTGAGCCATCTGACTGGTCTGACTGGCCCATGC | + |
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Preference number: 1 (lower is better) Translates to: HVVPRQAQAIRLGSK*LHPVSHLTGLTGPC Trigger: GCATGGGCCAGTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCTGATAGCCTGAGCCTGCCTAGGAACAACGTG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| 3UTR TCA 90 bp | TCCAAGTTTATTAATTTGTTCGCTTATTTTGTGCAAGTGTATACATaGGTACCTTGGTGCACGCATGAGGTCAGAAGAAGACTTTCAGGA | + |
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Preference number: 1 (lower is better) Translates to: SKFINLFAYFVQVYT*VPWCTHEVRRRLSG Trigger: TCCTGAAAGTCTTCTTCTGACCTCATGCGTGCACCAAGGTACTCATGTATACACTTGCACAAAATAAGCGAACAAATTAATAAACTTGGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| 3UTR GCA 90 bp | TCCTTACATAAATTTCCAAGTTTATTAATTTGTTCGCTTATTTTGTaGAAGTGTATACATGAGTACCTTGGTGCACGCATGAGGTCAGAA | + |
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Preference number: 1 (lower is better) Translates to: SLHKFPSLLICSLIL*KCIHEYLGARMRSE Trigger: TTCTGACCTCATGCGTGCACCAAGGTACTCATGTATACACTTGCACAAAATAAGCGAACAAATTAATAAACTTGGAAATTTATGTAAGGA 36% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| 3UTR-3UTR CCA 90 bp | GCTATCAGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGAACAGCGGTGCACGCTaGAAATGCCAACAGCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: AIRLGSKCLHPVSHLTGLNSGAR*KCQQLG Trigger: TCCCAGCTGTTGGCATTTCCAGCGTGCACCGCTGTT...CAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCTGATAGC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| 3UTR CAA 90 bp | CGCATGAGGTCAGAAGAAGACTTTCAGGATTTCTTCCTTTCCACGTaGTTCCTAGGCAGGCTCAGGCTATCAGGCTTGGCAGCAAGTGCC | + |
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Preference number: 2 (lower is better) Translates to: RMRSEEDFQDFFLST*FLGRLRLSGLAASA Trigger: GGCACTTGCTGCCAAGCCTGATAGCCTGAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGAAAGTCTTCTTCTGACCTCATGCG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| 3UTR-3UTR TCA 90 bp | TCAGGATTTCTTCCTTTCCACGTTGTTCCTAGGCAGGCTCAGGCTATCAGGCTTCAACAGCTGGGAGGCTaGAGCAGGAAGATAGAGTTC | + |
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Preference number: 2 (lower is better) Translates to: SGFLPFHVVPRQAQAIRLQQLGG*SRKIEF Trigger: GAACTCTATCTTCCTGCTTCAGCCTCCCAGCTGTTG...AAGCCTGATAGCCTGAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| 3UTR-3UTR CCA 90 bp | TTTCAGGATTTCTTCCTTTCCACGTTGTTCCTAGGCAGGCTCAGGCTATCAGGCGGAAATGCCAACAGCTaGGAGGCTGAAGCAGGAAGA | + |
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Preference number: 2 (lower is better) Translates to: FQDFFLSTLFLGRLRLSGGNANS*EAEAGR Trigger: TCTTCCTGCTTCAGCCTCCCAGCTGTTGGCATTTCC...GCCTGATAGCCTGAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGAAA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| 3UTR-3UTR TCA 90 bp | TCAGAAGAAGACTTTCAGGATTTCTTCCTTTCCACGTTGTTCCTAGGCAGGCTCGTTTTAAAACTATGCTaGATAACAGCGGTGCACGCT | + |
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Preference number: 2 (lower is better) Translates to: SEEDFQDFFLSTLFLGRLVLKLC*ITAVHA Trigger: AGCGTGCACCGCTGTTATTCAGCATAGTTTTAAAAC...GAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGAAAGTCTTCTTCTGA 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| 3UTR GCA 72 bp | CCTAGGCAGGCTCAGGCTATCAGGCTTGGCAGCAAGTaGCTTCACCCAGTGAGCCATCTGACTGGTCTGACT | + |
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Preference number: 3 (lower is better) Translates to: PRQAQAIRLGSK*LHPVSHLTGLT Trigger: AGTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCTGATAGCCTGAGCCTGCCTAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| 3UTR TCA 72 bp | TGTGCAAGTGTATACATGAGTACCTTGGTGCACGCATaGGGTCAGAAGAAGACTTTCAGGATTTCTTCCTTT | + |
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Preference number: 3 (lower is better) Translates to: CASVYMSTLVHA*GQKKTFRISSF Trigger: AAAGGAAGAAATCCTGAAAGTCTTCTTCTGACCTCATGCGTGCACCAAGGTACTCATGTATACACTTGCACA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| 3UTR TCA 72 bp | ATTAATTTGTTCGCTTATTTTGTGCAAGTGTATACATaGGTACCTTGGTGCACGCATGAGGTCAGAAGAAGA | + |
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Preference number: 3 (lower is better) Translates to: INLFAYFVQVYT*VPWCTHEVRRR Trigger: TCTTCTTCTGACCTCATGCGTGCACCAAGGTACTCATGTATACACTTGCACAAAATAAGCGAACAAATTAAT 39% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR TCA 90 bp | GCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACTGGCCCACAGCTTCCGCCTGCTaGCGAACATCCTTAGCAGGA | + |
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Preference number: 4 (lower is better) Translates to: AWQQVPSPSEPSDWSDWPTASAC*RTSLAG Trigger: TCCTGCTAAGGATGTTCGTCAGCAGGCGGAAGCTGT...GGGCCAGTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGC 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CCA 90 bp | AGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACTGGCCCATGCCGATCCTTGCTGCTGGAATaGCAAAGGGCCCAACCCCAG | + |
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Preference number: 4 (lower is better) Translates to: SKCLHPVSHLTGLTGPCRSLLLE*QRAQPQ Trigger: CTGGGGTTGGGCCCTTTGCCATTCCAGCAGCAAGGA...TCGGCATGGGCCAGTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CCA 90 bp | GCTATCAGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGAGTAACAGTGCACTGTaGGGAGGAGCTCCGTGCTGC | + |
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Preference number: 4 (lower is better) Translates to: AIRLGSKCLHPVSHLTGLSNSAL*GGAPCC Trigger: GCAGCACGGAGCTCCTCCCCACAGTGCACTGTTACT...CAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCTGATAGC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR TCA 90 bp | AGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACTGGCTGGGAATCTGGAAGGTaGTGCACAGCATCTCCTTGT | + |
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Preference number: 4 (lower is better) Translates to: RLGSKCLHPVSHLTGLTGWESGR*CTASPC Trigger: ACAAGGAGATGCTGTGCATCACCTTCCAGATTCCCA...GCCAGTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR GCA 90 bp | TATCAGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACGCAGTTTTTCCTTGCTaGTGGAATGGCAAAGGGCCC | + |
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Preference number: 4 (lower is better) Translates to: YQAWQQVPSPSEPSDWSDAVFPC*WNGKGP Trigger: GGGCCCTTTGCCATTCCAGCAGCAAGGAAAAACTGC...GTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCTGATA 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CCA 90 bp | GCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACTGGCCCCAGGATCGCTATCTTTaGAGAAGCAGTAACAGTGCA | + |
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Preference number: 4 (lower is better) Translates to: AWQQVPSPSEPSDWSDWPQDRYL*RSSNSA Trigger: TGCACTGTTACTGCTTCTCCAAAGATAGCGATCCTG...GGGCCAGTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR TCA 90 bp | AGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACTGGCTATTTCTGGCATGGTTaGGAGTCCTTGTCTTTGACC | + |
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Preference number: 4 (lower is better) Translates to: RLGSKCLHPVSHLTGLTGYFWHG*ESLSLT Trigger: GGTCAAAGACAAGGACTCTCAACCATGCCAGAAATA...GCCAGTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR TCA 90 bp | AGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACTGGCTATGGGACTCAGGATTaGGATCATTGGCAAACACTG | + |
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Preference number: 4 (lower is better) Translates to: RLGSKCLHPVSHLTGLTGYGTQD*DHWQTL Trigger: CAGTGTTTGCCAATGATCTCAATCCTGAGTCCCATA...GCCAGTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR GCA 90 bp | GCTATCAGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGTGTGCAGTTTTTCCTTaGTGCTGGAATGGCAAAGGG | + |
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Preference number: 4 (lower is better) Translates to: AIRLGSKCLHPVSHLTGLCAVFP*CWNGKG Trigger: CCCTTTGCCATTCCAGCAGCAAGGAAAAACTGCACA...CAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCTGATAGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR GCA 90 bp | TTTCAGGATTTCTTCCTTTCCACGTTGTTCCTAGGCAGGCTCAGGCTATCAGGCGGAGGAGCTCCGTGCTaGAAGGCTGCCCATCCAAAA | + |
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Preference number: 4 (lower is better) Translates to: FQDFFLSTLFLGRLRLSGGGAPC*KAAHPK Trigger: TTTTGGATGGGCAGCCTTGCAGCACGGAGCTCCTCC...GCCTGATAGCCTGAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGAAA 53% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR TCA 90 bp | AGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACTGGCCCATGCCGAGAGAGTCCTTGTCTTTaGCCCAACAAGAAAACAGAA | + |
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Preference number: 4 (lower is better) Translates to: SKCLHPVSHLTGLTGPCRESPCL*PNKKTE Trigger: TTCTGTTTTCTTGTTGGGTCAAAGACAAGGACTCTC...TCGGCATGGGCCAGTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR GCA 90 bp | GCTATCAGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGCATTGGCAAACACTGTaGAGTTTTTCCTTGCTGCTG | + |
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Preference number: 4 (lower is better) Translates to: AIRLGSKCLHPVSHLTGLHWQTL*SFSLLL Trigger: CAGCAGCAAGGAAAAACTGCACAGTGTTTGCCAATG...CAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCTGATAGC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR TCA 90 bp | GCTATCAGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGCTGCCCATCCAAAAGTaGTCTGAAAACACTGAGAAA | + |
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Preference number: 4 (lower is better) Translates to: AIRLGSKCLHPVSHLTGLLPIQK*SENTEK Trigger: TTTCTCAGTGTTTTCAGATCACTTTTGGATGGGCAG...CAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCTGATAGC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR GCA 90 bp | AGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACTGGCACTATCTCTCACACTTaGTTCTATTTCTGGCATGGT | + |
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Preference number: 4 (lower is better) Translates to: RLGSKCLHPVSHLTGLTGTISHT*FYFWHG Trigger: ACCATGCCAGAAATAGAAGCAAGTGTGAGAGATAGT...GCCAGTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CCA 90 bp | AGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACTGGCCACAGCACTTCCATTTaGAAATTTCGGTACGTATTG | + |
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Preference number: 4 (lower is better) Translates to: RLGSKCLHPVSHLTGLTGHSTSI*KFRYVL Trigger: CAATACGTACCGAAATTTCCAAATGGAAGTGCTGTG...GCCAGTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CCA 90 bp | TATCAGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACCTCTATGGCCTTAGCTaGCAAGTTCATGACAATGTG | + |
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Preference number: 4 (lower is better) Translates to: YQAWQQVPSPSEPSDWSDLYGLS*QVHDNV Trigger: CACATTGTCATGAACTTGCCAGCTAAGGCCATAGAG...GTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR TCA 90 bp | GCTATCAGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGGGGATAACTGTGGGCTaGCATCAAGTTCTTTTAAAA | + |
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Preference number: 4 (lower is better) Translates to: AIRLGSKCLHPVSHLTGLGITVG*HQVLLK Trigger: TTTTAAAAGAACTTGATGTCAGCCCACAGTTATCCC...CAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCTGATAGC 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CCA 90 bp | TATCAGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACTGCAACAGCCATTTATaGGACTCAGGATTGAGATCA | + |
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Preference number: 4 (lower is better) Translates to: YQAWQQVPSPSEPSDWSDCNSHL*DSGLRS Trigger: TGATCTCAATCCTGAGTCCCATAAATGGCTGTTGCA...GTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCTGATA 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR TCA 90 bp | TCAGGATTTCTTCCTTTCCACGTTGTTCCTAGGCAGGCTCAGGCTATCAGGCTTGGTCATTCTGTAGACTaGGGCTTTGGTTCCTGTAGA | + |
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Preference number: 4 (lower is better) Translates to: SGFLPFHVVPRQAQAIRLGHSVD*GFGSCR Trigger: TCTACAGGAACCAAAGCCTCAGTCTACAGAATGACC...AAGCCTGATAGCCTGAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR GCA 90 bp | TTTCAGGATTTCTTCCTTTCCACGTTGTTCCTAGGCAGGCTCAGGCTATCAGGCTTCAGGTGTGCAATATaGCCAACCCTGCTGAATCCA | + |
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Preference number: 4 (lower is better) Translates to: FQDFFLSTLFLGRLRLSGFRCAI*PTLLNP Trigger: TGGATTCAGCAGGGTTGGGCATATTGCACACCTGAA...GCCTGATAGCCTGAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGAAA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| 3UTR CAA 72 bp | TCAGAAGAAGACTTTCAGGATTTCTTCCTTTCCACGTaGTTCCTAGGCAGGCTCAGGCTATCAGGCTTGGCA | + |
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Preference number: 4 (lower is better) Translates to: SEEDFQDFFLST*FLGRLRLSGLA Trigger: TGCCAAGCCTGATAGCCTGAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGAAAGTCTTCTTCTGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CCA 90 bp | GCTATCAGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGTATTGTCAATGTTGCTaGTTTTATTTACTGCTGAGG | + |
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Preference number: 4 (lower is better) Translates to: AIRLGSKCLHPVSHLTGLYCQCC*FYLLLR Trigger: CCTCAGCAGTAAATAAAACCAGCAACATTGACAATA...CAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCTGATAGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CCA 90 bp | TCAGAAGAAGACTTTCAGGATTTCTTCCTTTCCACGTTGTTCCTAGGCAGGCTCTCTCTGACTGGCCCTTaGATGAAGTCTTTTCCATCC | + |
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Preference number: 4 (lower is better) Translates to: SEEDFQDFFLSTLFLGRLSLTGP*MKSFPS Trigger: GGATGGAAAAGACTTCATCCAAGGGCCAGTCAGAGA...GAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGAAAGTCTTCTTCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CCA 90 bp | TCAGGATTTCTTCCTTTCCACGTTGTTCCTAGGCAGGCTCAGGCTATCAGGCTTTTAAGAGGTGGTTCTTaGTCATTCTGTAGACTGAGG | + |
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Preference number: 4 (lower is better) Translates to: SGFLPFHVVPRQAQAIRLLRGGS*SFCRLR Trigger: CCTCAGTCTACAGAATGACCAAGAACCACCTCTTAA...AAGCCTGATAGCCTGAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR TCA 90 bp | CTGAAGCAGGAAGATAGAGTTCTAAGCCCTGAGTTACACAGATCCTGCCACAAACTCGCATCAATCTGTTaGCTACTTCTTTCCTCGCTT | + |
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Preference number: 4 (lower is better) Translates to: LKQEDRVLSPELHRSCHKLASIC*LLLSSL Trigger: AAGCGAGGAAAGAAGTAGTCAACAGATTGATGCGAG...TTTGTGGCAGGATCTGTGTAACTCAGGGCTTAGAACTCTATCTTCCTGCTTCAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR TCA 90 bp | TCAGAAGAAGACTTTCAGGATTTCTTCCTTTCCACGTTGTTCCTAGGCAGGCTCGGTTTTATTTACTGCTaGGGTGATTCCTGGGTTTTT | + |
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Preference number: 4 (lower is better) Translates to: SEEDFQDFFLSTLFLGRLGFIYC*GDSWVF Trigger: AAAAACCCAGGAATCACCTCAGCAGTAAATAAAACC...GAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGAAAGTCTTCTTCTGA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CCA 90 bp | TCAGAAGAAGACTTTCAGGATTTCTTCCTTTCCACGTTGTTCCTAGGCAGGCTCAAGTTCATGACAATGTaGACAGAGGGTTTAGCTTCA | + |
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Preference number: 4 (lower is better) Translates to: SEEDFQDFFLSTLFLGRLKFMTM*TEGLAS Trigger: TGAAGCTAAACCCTCTGTCCACATTGTCATGAACTT...GAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGAAAGTCTTCTTCTGA 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| 3UTR CAA 72 bp | CATAAATTTCCAAGTTTATTAATTTGTTCGCTTATTTaGTGCAAGTGTATACATGAGTACCTTGGTGCACGC | + |
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Preference number: 4 (lower is better) Translates to: HKFPSLLICSLI*CKCIHEYLGAR Trigger: GCGTGCACCAAGGTACTCATGTATACACTTGCACAAAATAAGCGAACAAATTAATAAACTTGGAAATTTATG 35% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CAA 90 bp | AGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACTGGCTCCAGAGGTTACATCTaGACCTTCAGGAAGCACAGC | + |
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Preference number: 5 (lower is better) Translates to: RLGSKCLHPVSHLTGLTGSRGYI*TFRKHS Trigger: GCTGTGCTTCCTGAAGGTCAAGATGTAACCTCTGGA...GCCAGTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CAA 90 bp | AGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACTGGCCCATGCCGAATGCACAGCATCTCCTaGTTAGGGGCCACATTCCTT | + |
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Preference number: 5 (lower is better) Translates to: SKCLHPVSHLTGLTGPCRMHSIS*LGATFL Trigger: AAGGAATGTGGCCCCTAACAAGGAGATGCTGTGCAT...TCGGCATGGGCCAGTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS TCA 90 bp | GCACAGCATCTCCTTGTTAGGGGCCACATTCCTTACGAGATGAACTaGACTACTGGTCTCCAAGGAAACGCCCAGCACAGCTTCCGCCTG | + |
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Preference number: 5 (lower is better) Translates to: AQHLLVRGHIPYEMN*TTGLQGNAQHSFRL Trigger: CAGGCGGAAGCTGTGCTGGGCGTTTCCTTGGAGACCAGTAGTTCAGTTCATCTCGTAAGGAATGTGGCCCCTAACAAGGAGATGCTGTGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CAA 90 bp | AGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACTGGCCCATGCCGAGTGATTCCTGGGTTTTaGTCAACCATAACTTGGCCA | + |
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Preference number: 5 (lower is better) Translates to: SKCLHPVSHLTGLTGPCRVIPGF*STITWP Trigger: TGGCCAAGTTATGGTTGACAAAAACCCAGGAATCAC...TCGGCATGGGCCAGTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CAA 90 bp | GCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACTGGCCCTTATGGGACTCAGGATaGAGATCATTGGCAAACACT | + |
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Preference number: 5 (lower is better) Translates to: AWQQVPSPSEPSDWSDWPLWDSG*RSLANT Trigger: AGTGTTTGCCAATGATCTCAATCCTGAGTCCCATAA...GGGCCAGTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CAA 90 bp | GCTATCAGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGTTCTCTGACTGGCCCTaGGATGAAGTCTTTTCCATC | + |
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Preference number: 5 (lower is better) Translates to: AIRLGSKCLHPVSHLTGLFSDWP*DEVFSI Trigger: GATGGAAAAGACTTCATCCAAGGGCCAGTCAGAGAA...CAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCTGATAGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS TCA 90 bp | GTGATGCACAGCATCTCCTTGTTAGGGGCCACATTCCTTACGAGATaGACTGAACTACTGGTCTCCAAGGAAACGCCCAGCACAGCTTCC | + |
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Preference number: 5 (lower is better) Translates to: VMHSISLLGATFLTR*TELLVSKETPSTAS Trigger: GGAAGCTGTGCTGGGCGTTTCCTTGGAGACCAGTAGTTCAGTTCATCTCGTAAGGAATGTGGCCCCTAACAAGGAGATGCTGTGCATCAC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS-3UTR CAA 90 bp | GCTATCAGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACTCCGAGTTCTGCTTaGTCAAAGGAATCAGCAGTA | + |
|
Preference number: 5 (lower is better) Translates to: AIRLGSKCLHPVSHLTGLTPSSA*SKESAV Trigger: TACTGCTGATTCCTTTGACAAAGCAGAACTCGGAGT...CAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCTGATAGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS-3UTR CAA 90 bp | TATCAGGCTTGGCAGCAAGTGCCTTCACCCAGTGAGCCATCTGACTGGTCTGACCTATTTCTGGCATGGTaGAGAGTCCTTGTCTTTGAC | + |
|
Preference number: 5 (lower is better) Translates to: YQAWQQVPSPSEPSDWSDLFLAW*RVLVFD Trigger: GTCAAAGACAAGGACTCTCAACCATGCCAGAAATAG...GTCAGACCAGTCAGATGGCTCACTGGGTGAAGGCACTTGCTGCCAAGCCTGATA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS TCA 90 bp | GCTGGTGATCTCGGAGATTCAGGTGTGCAATATGCCCAACCCTGCTaGATCCAGAGGTTACATCTTGACCTTCAGGAAGCACAGCTTTCA | + |
|
Preference number: 5 (lower is better) Translates to: AGDLGDSGVQYAQPC*IQRLHLDLQEAQLS Trigger: TGAAAGCTGTGCTTCCTGAAGGTCAAGATGTAACCTCTGGATTCAGCAGGGTTGGGCATATTGCACACCTGAATCTCCGAGATCACCAGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS GCA 90 bp | TCTGATGCGATCTGTGGTTCTCCTGAGAACGGGTCACCTGTCTTCTaGCGTTTAAGAGGTGGTTCTTGGTCATTCTCTTGGTCAGCATAT | + |
|
Preference number: 5 (lower is better) Translates to: SDAICGSPENGSPVF*RLRGGSWSFSWSAY Trigger: ATATGCTGACCAAGAGAATGACCAAGAACCACCTCTTAAACGGCAGAAGACAGGTGACCCGTTCTCAGGAGAACCACAGATCGCATCAGA 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220701.2 |
||
| CDS CCA 90 bp | CCTGAGAACGGGTCACCTGTCTTCTGCCGTTTAAGAGGTGGTTCTTaGTCATTCTCTTGGTCAGCATATTTTCCTCTCCACACAGCACTT | + |
|
Preference number: 5 (lower is better) Translates to: PENGSPVFCRLRGGS*SFSWSAYFPLHTAL Trigger: AAGTGCTGTGTGGAGAGGAAAATATGCTGACCAAGAGAATGACCAAGAACCACCTCTTAAACGGCAGAAGACAGGTGACCCGTTCTCAGG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220701.2 |
||
| CDS TCA 90 bp | CTCACACTTGCTTCTATTTCTGGCATGGTTGAGAGTCCTTGTCTTTaGCCCAACAAGAAAACAGAAGGCGCTTTCCTAAGTCTCGGCACC | + |
|
Preference number: 5 (lower is better) Translates to: LTLASISGMVESPCL*PNKKTEGAFLSLGT Trigger: GGTGCCGAGACTTAGGAAAGCGCCTTCTGTTTTCTTGTTGGGTCAAAGACAAGGACTCTCAACCATGCCAGAAATAGAAGCAAGTGTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS TCA 90 bp | TTGTCAACCATAACTTGGCCAATTAAATGCTTGAAGGGCAGCTGGTaGTCTCGGAGATTCAGGTGTGCAATATGCCCAACCCTGCTGAAT | + |
|
Preference number: 5 (lower is better) Translates to: LSTITWPIKCLKGSW*SRRFRCAICPTLLN Trigger: ATTCAGCAGGGTTGGGCATATTGCACACCTGAATCTCCGAGATCACCAGCTGCCCTTCAAGCATTTAATTGGCCAAGTTATGGTTGACAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CCA 90 bp | ACACTGAGAAACTCTATGGCCTTAGCTGGCAAGTTCATGACAATGTaGACAGAGGGTTTAGCTTCAGCTGACAATCCTAGCCGAAGCATT | + |
|
Preference number: 5 (lower is better) Translates to: TLRNSMALAGKFMTM*TEGLASADNPSRSI Trigger: AATGCTTCGGCTAGGATTGTCAGCTGAAGCTAAACCCTCTGTCCACATTGTCATGAACTTGCCAGCTAAGGCCATAGAGTTTCTCAGTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS-3UTR CAA 90 bp | TCAGAAGAAGACTTTCAGGATTTCTTCCTTTCCACGTTGTTCCTAGGCAGGCTCCACTATCTCTCACACTaGCTTCTATTTCTGGCATGG | + |
|
Preference number: 5 (lower is better) Translates to: SEEDFQDFFLSTLFLGRLHYLSH*LLFLAW Trigger: CCATGCCAGAAATAGAAGCAAGTGTGAGAGATAGTG...GAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGAAAGTCTTCTTCTGA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS-3UTR CAA 90 bp | TTTCAGGATTTCTTCCTTTCCACGTTGTTCCTAGGCAGGCTCAGGCTATCAGGCACACAGCACTTCCATTaGGAAATTTCGGTACGTATT | + |
|
Preference number: 5 (lower is better) Translates to: FQDFFLSTLFLGRLRLSGTQHFH*EISVRI Trigger: AATACGTACCGAAATTTCCAAATGGAAGTGCTGTGT...GCCTGATAGCCTGAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGAAA 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS-3UTR CAA 90 bp | TTTCAGGATTTCTTCCTTTCCACGTTGTTCCTAGGCAGGCTCAGGCTATCAGGCTTGTTTTCTCGAACCTaGGTCAGCATATTTTCCTCT | + |
|
Preference number: 5 (lower is better) Translates to: FQDFFLSTLFLGRLRLSGLFSRT*VSIFSS Trigger: AGAGGAAAATATGCTGACCAAGGTTCGAGAAAACAA...GCCTGATAGCCTGAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGAAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CCA 90 bp | GCTGACAATCCTAGCCGAAGCATTAACTCTTCTCTGACTGGCCCTTaGATGAAGTCTTTTCCATCCATGTTAAAGACTTTCACTTTCTGG | + |
|
Preference number: 5 (lower is better) Translates to: ADNPSRSINSSLTGP*MKSFPSMLKTFTFW Trigger: CCAGAAAGTGAAAGTCTTTAACATGGATGGAAAAGACTTCATCCAAGGGCCAGTCAGAGAAGAGTTAATGCTTCGGCTAGGATTGTCAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS-3UTR CAA 90 bp | CTGAAGCAGGAAGATAGAGTTCTAAGCCCTGAGTTACACAGATCCTGCCACAAATCAGGATTGAGATCATaGGCAAACACTGTGCAGTTT | + |
|
Preference number: 5 (lower is better) Translates to: LKQEDRVLSPELHRSCHKSGLRS*ANTVQF Trigger: AAACTGCACAGTGTTTGCCAATGATCTCAATCCTGA...TTTGTGGCAGGATCTGTGTAACTCAGGGCTTAGAACTCTATCTTCCTGCTTCAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS-3UTR CAA 90 bp | TCAGAAGAAGACTTTCAGGATTTCTTCCTTTCCACGTTGTTCCTAGGCAGGCTCCTTGCAAAAGTCTTCTaGAGAATCCAAATAGCTTCC | + |
|
Preference number: 5 (lower is better) Translates to: SEEDFQDFFLSTLFLGRLLAKVF*RIQIAS Trigger: GGAAGCTATTTGGATTCTCAAGAAGACTTTTGCAAG...GAGCCTGCCTAGGAACAACGTGGAAAGGAAGAAATCCTGAAAGTCTTCTTCTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS TCA 90 bp | TATTCAGTTTACAATTGTGCAACAGCCATTTATGGGACTCAGGATTaGGATCATTGGCAAACACTGTGCAGTTTTTCCTTGCTGCTGGAA | + |
|
Preference number: 5 (lower is better) Translates to: YSVYNCATAIYGTQD*DHWQTLCSFSLLLE Trigger: TTCCAGCAGCAAGGAAAAACTGCACAGTGTTTGCCAATGATCTCAATCCTGAGTCCCATAAATGGCTGTTGCACAATTGTAAACTGAATA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CCA 90 bp | CGAACCTTGGTCAGCATATTTTCCTCTCCACACAGCACTTCCATTTaGAAATTTCGGTACGTATTGTCAATGTTGCTGGTTTTATTTACT | + |
|
Preference number: 5 (lower is better) Translates to: RTLVSIFSSPHSTSI*KFRYVLSMLLVLFT Trigger: AGTAAATAAAACCAGCAACATTGACAATACGTACCGAAATTTCCAAATGGAAGTGCTGTGTGGAGAGGAAAATATGCTGACCAAGGTTCG 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CCA 90 bp | TTCTGGTCAACTTTATTCAGTTTACAATTGTGCAACAGCCATTTATaGGACTCAGGATTGAGATCATTGGCAAACACTGTGCAGTTTTTC | + |
|
Preference number: 5 (lower is better) Translates to: FWSTLFSLQLCNSHL*DSGLRSLANTVQFF Trigger: GAAAAACTGCACAGTGTTTGCCAATGATCTCAATCCTGAGTCCCATAAATGGCTGTTGCACAATTGTAAACTGAATAAAGTTGACCAGAA 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CAA 90 bp | CCCGGGCGCTGCAGGGCTACTCTCCTGAGGGCTCGCATCAATCTGTaGACTACTTCTTTCCTCGCTTTAAGCACAGGGATGGACACTGTC | + |
|
Preference number: 6 (lower is better) Translates to: PGRCRATLLRARINL*TTSFLALSTGMDTV Trigger: GACAGTGTCCATCCCTGTGCTTAAAGCGAGGAAAGAAGTAGTCAACAGATTGATGCGAGCCCTCAGGAGAGTAGCCCTGCAGCGCCCGGG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116420.4 ENSMUST00000221189.2 |
||
| CDS CCA 72 bp | GATCGCTATCTTTGGAGAAGCAGTAACAGTGCACTGTaGGGAGGAGCTCCGTGCTGCAAGGCTGCCCATCCA | + |
|
Preference number: 6 (lower is better) Translates to: DRYLWRSSNSAL*GGAPCCKAAHP Trigger: TGGATGGGCAGCCTTGCAGCACGGAGCTCCTCCCCACAGTGCACTGTTACTGCTTCTCCAAAGATAGCGATC 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS TCA 72 bp | CTCCTTGTTAGGGGCCACATTCCTTACGAGATGAACTaGACTACTGGTCTCCAAGGAAACGCCCAGCACAGC | + |
|
Preference number: 6 (lower is better) Translates to: LLVRGHIPYEMN*TTGLQGNAQHS Trigger: GCTGTGCTGGGCGTTTCCTTGGAGACCAGTAGTTCAGTTCATCTCGTAAGGAATGTGGCCCCTAACAAGGAG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS GCA 72 bp | CTTGAAGGGCAGCTGGTGATCTCGGAGATTCAGGTGTaGAATATGCCCAACCCTGCTGAATCCAGAGGTTAC | + |
|
Preference number: 6 (lower is better) Translates to: LEGQLVISEIQV*NMPNPAESRGY Trigger: GTAACCTCTGGATTCAGCAGGGTTGGGCATATTGCACACCTGAATCTCCGAGATCACCAGCTGCCCTTCAAG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS TCA 72 bp | AGCATCTCCTTGTTAGGGGCCACATTCCTTACGAGATaGACTGAACTACTGGTCTCCAAGGAAACGCCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: SISLLGATFLTR*TELLVSKETPS Trigger: GCTGGGCGTTTCCTTGGAGACCAGTAGTTCAGTTCATCTCGTAAGGAATGTGGCCCCTAACAAGGAGATGCT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CAA 72 bp | TGCAGGGCTACTCTCCTGAGGGCTCGCATCAATCTGTaGACTACTTCTTTCCTCGCTTTAAGCACAGGGATG | + |
|
Preference number: 6 (lower is better) Translates to: CRATLLRARINL*TTSFLALSTGM Trigger: CATCCCTGTGCTTAAAGCGAGGAAAGAAGTAGTCAACAGATTGATGCGAGCCCTCAGGAGAGTAGCCCTGCA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000116420.4 ENSMUST00000221189.2 |
||
| CDS CAA 90 bp | AAGGGCCCAACCCCAGCAAAAACATCAAACAAGACATCTCCAGGGTaGAGAAGTTCAGTGATCCGGCCATGTTCAGTAGAGAGACGAGGA | + |
|
Preference number: 6 (lower is better) Translates to: KGPTPAKTSNKTSPG*RSSVIRPCSVERRG Trigger: TCCTCGTCTCTCTACTGAACATGGCCGGATCACTGAACTTCTCAACCCTGGAGATGTCTTGTTTGATGTTTTTGCTGGGGTTGGGCCCTT 50% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS GCA 72 bp | ATCTGTGGTTCTCCTGAGAACGGGTCACCTGTCTTCTaGCGTTTAAGAGGTGGTTCTTGGTCATTCTCTTGG | + |
|
Preference number: 6 (lower is better) Translates to: ICGSPENGSPVF*RLRGGSWSFSW Trigger: CCAAGAGAATGACCAAGAACCACCTCTTAAACGGCAGAAGACAGGTGACCCGTTCTCAGGAGAACCACAGAT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000220701.2 |
||
| CDS GCA 72 bp | ATTGAGATCATTGGCAAACACTGTGCAGTTTTTCCTTaGTGCTGGAATGGCAAAGGGCCCAACCCCAGCAAA | + |
|
Preference number: 6 (lower is better) Translates to: IEIIGKHCAVFP*CWNGKGPNPSK Trigger: TTTGCTGGGGTTGGGCCCTTTGCCATTCCAGCAGCAAGGAAAAACTGCACAGTGTTTGCCAATGATCTCAAT 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS TCA 72 bp | ATAACTTGGCCAATTAAATGCTTGAAGGGCAGCTGGTaGTCTCGGAGATTCAGGTGTGCAATATGCCCAACC | + |
|
Preference number: 6 (lower is better) Translates to: ITWPIKCLKGSW*SRRFRCAICPT Trigger: GGTTGGGCATATTGCACACCTGAATCTCCGAGATCACCAGCTGCCCTTCAAGCATTTAATTGGCCAAGTTAT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CCA 72 bp | AACTCTATGGCCTTAGCTGGCAAGTTCATGACAATGTaGACAGAGGGTTTAGCTTCAGCTGACAATCCTAGC | + |
|
Preference number: 6 (lower is better) Translates to: NSMALAGKFMTM*TEGLASADNPS Trigger: GCTAGGATTGTCAGCTGAAGCTAAACCCTCTGTCCACATTGTCATGAACTTGCCAGCTAAGGCCATAGAGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CAA 72 bp | ACCCCAGCAAAAACATCAAACAAGACATCTCCAGGGTaGAGAAGTTCAGTGATCCGGCCATGTTCAGTAGAG | + |
|
Preference number: 6 (lower is better) Translates to: TPAKTSNKTSPG*RSSVIRPCSVE Trigger: CTCTACTGAACATGGCCGGATCACTGAACTTCTCAACCCTGGAGATGTCTTGTTTGATGTTTTTGCTGGGGT 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CAA 72 bp | CTTCTGCCGTTTAAGAGGTGGTTCTTGGTCATTCTCTaGGTCAGCATATTTTCCTCTCCACACAGCACTTCC | + |
|
Preference number: 6 (lower is better) Translates to: LLPFKRWFLVIL*VSIFSSPHSTS Trigger: GGAAGTGCTGTGTGGAGAGGAAAATATGCTGACCAAGAGAATGACCAAGAACCACCTCTTAAACGGCAGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220701.2 |
||
| CDS CCA 72 bp | TTCTGCCGTTTAAGAGGTGGTTCTTGGTCATTCTCTTaGTCAGCATATTTTCCTCTCCACACAGCACTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: FCRLRGGSWSFS*SAYFPLHTALP Trigger: TGGAAGTGCTGTGTGGAGAGGAAAATATGCTGACCAAGAGAATGACCAAGAACCACCTCTTAAACGGCAGAA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000220701.2 |
||
| CDS TCA 72 bp | GCTTCTATTTCTGGCATGGTTGAGAGTCCTTGTCTTTaGCCCAACAAGAAAACAGAAGGCGCTTTCCTAAGT | + |
|
Preference number: 6 (lower is better) Translates to: ASISGMVESPCL*PNKKTEGAFLS Trigger: ACTTAGGAAAGCGCCTTCTGTTTTCTTGTTGGGTCAAAGACAAGGACTCTCAACCATGCCAGAAATAGAAGC 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CCA 72 bp | CCTAGCCGAAGCATTAACTCTTCTCTGACTGGCCCTTaGATGAAGTCTTTTCCATCCATGTTAAAGACTTTC | + |
|
Preference number: 6 (lower is better) Translates to: PSRSINSSLTGP*MKSFPSMLKTF Trigger: GAAAGTCTTTAACATGGATGGAAAAGACTTCATCCAAGGGCCAGTCAGAGAAGAGTTAATGCTTCGGCTAGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS TCA 72 bp | GGCACCAGGGTAAACAACAATATTGATTCACTGGGGTaGCACCATTCCACTTGCAAAAGTCTTCTTGAGAAT | + |
|
Preference number: 6 (lower is better) Translates to: GTRVNNNIDSLG*HHSTCKSLLEN Trigger: ATTCTCAAGAAGACTTTTGCAAGTGGAATGGTGTCACCCCAGTGAATCAATATTGTTGTTTACCCTGGTGCC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CAA 72 bp | CACTATCTCTCACACTTGCTTCTATTTCTGGCATGGTaGAGAGTCCTTGTCTTTGACCCAACAAGAAAACAG | + |
|
Preference number: 6 (lower is better) Translates to: HYLSHLLLFLAW*RVLVFDPTRKQ Trigger: CTGTTTTCTTGTTGGGTCAAAGACAAGGACTCTCAACCATGCCAGAAATAGAAGCAAGTGTGAGAGATAGTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CAA 72 bp | AATATGCCCAACCCTGCTGAATCCAGAGGTTACATCTaGACCTTCAGGAAGCACAGCTTTCAAAATTTCTTC | + |
|
Preference number: 6 (lower is better) Translates to: NMPNPAESRGYI*TFRKHSFQNFF Trigger: GAAGAAATTTTGAAAGCTGTGCTTCCTGAAGGTCAAGATGTAACCTCTGGATTCAGCAGGGTTGGGCATATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CAA 72 bp | GGTCAGCATATTTTCCTCTCCACACAGCACTTCCATTaGGAAATTTCGGTACGTATTGTCAATGTTGCTGGT | + |
|
Preference number: 6 (lower is better) Translates to: GQHIFLSTQHFH*EISVRIVNVAG Trigger: ACCAGCAACATTGACAATACGTACCGAAATTTCCAAATGGAAGTGCTGTGTGGAGAGGAAAATATGCTGACC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CAA 90 bp | TCAATGTTGCTGGTTTTATTTACTGCTGAGGTGATTCCTGGGTTTTaGTCAACCATAACTTGGCCAATTAAATGCTTGAAGGGCAGCTGG | + |
|
Preference number: 6 (lower is better) Translates to: SMLLVLFTAEVIPGF*STITWPIKCLKGSW Trigger: CCAGCTGCCCTTCAAGCATTTAATTGGCCAAGTTATGGTTGACAAAAACCCAGGAATCACCTCAGCAGTAAATAAAACCAGCAACATTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CCA 72 bp | GTCAGCATATTTTCCTCTCCACACAGCACTTCCATTTaGAAATTTCGGTACGTATTGTCAATGTTGCTGGTT | + |
|
Preference number: 6 (lower is better) Translates to: VSIFSSPHSTSI*KFRYVLSMLLV Trigger: AACCAGCAACATTGACAATACGTACCGAAATTTCCAAATGGAAGTGCTGTGTGGAGAGGAAAATATGCTGAC 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CCA 72 bp | AATCAAACTCATACGTGTAGTTGTTTTCTCGAACCTTaGTCAGCATATTTTCCTCTCCACACAGCACTTCCA | + |
|
Preference number: 6 (lower is better) Translates to: NQTHTCSCFLEP*SAYFPLHTALP Trigger: TGGAAGTGCTGTGTGGAGAGGAAAATATGCTGACCAAGGTTCGAGAAAACAACTACACGTATGAGTTTGATT 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CAA 72 bp | CCACACAGCACTTCCATTTGGAAATTTCGGTACGTATaGTCAATGTTGCTGGTTTTATTTACTGCTGAGGTG | + |
|
Preference number: 6 (lower is better) Translates to: PHSTSIWKFRYV*SMLLVLFTAEV Trigger: CACCTCAGCAGTAAATAAAACCAGCAACATTGACAATACGTACCGAAATTTCCAAATGGAAGTGCTGTGTGG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CAA 90 bp | CCACACAGCACTTCCATTTGGAAATTTCGGTACGTATTGTCAATGTaGCTGGTTTTATTTACTGCTGAGGTGATTCCTGGGTTTTTGTCA | + |
|
Preference number: 6 (lower is better) Translates to: PHSTSIWKFRYVLSM*LVLFTAEVIPGFLS Trigger: TGACAAAAACCCAGGAATCACCTCAGCAGTAAATAAAACCAGCAACATTGACAATACGTACCGAAATTTCCAAATGGAAGTGCTGTGTGG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CAA 90 bp | TTATTCAGTTTACAATTGTGCAACAGCCATTTATGGGACTCAGGATaGAGATCATTGGCAAACACTGTGCAGTTTTTCCTTGCTGCTGGA | + |
|
Preference number: 6 (lower is better) Translates to: LFSLQLCNSHLWDSG*RSLANTVQFFLAAG Trigger: TCCAGCAGCAAGGAAAAACTGCACAGTGTTTGCCAATGATCTCAATCCTGAGTCCCATAAATGGCTGTTGCACAATTGTAAACTGAATAA 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CAA 90 bp | TCGAACCTTGGTCAGCATATTTTCCTCTCCACACAGCACTTCCATTaGGAAATTTCGGTACGTATTGTCAATGTTGCTGGTTTTATTTAC | + |
|
Preference number: 6 (lower is better) Translates to: SNLGQHIFLSTQHFH*EISVRIVNVAGFIY Trigger: GTAAATAAAACCAGCAACATTGACAATACGTACCGAAATTTCCAAATGGAAGTGCTGTGTGGAGAGGAAAATATGCTGACCAAGGTTCGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CCA 72 bp | ATTCACTATCTCTCACACTTGCTTCTATTTCTGGCATaGTTGAGAGTCCTTGTCTTTGACCCAACAAGAAAA | + |
|
Preference number: 6 (lower is better) Translates to: IHYLSHLLLFLA*LRVLVFDPTRK Trigger: TTTTCTTGTTGGGTCAAAGACAAGGACTCTCAACCATGCCAGAAATAGAAGCAAGTGTGAGAGATAGTGAAT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CAA 72 bp | ACTTCCATTTGGAAATTTCGGTACGTATTGTCAATGTaGCTGGTTTTATTTACTGCTGAGGTGATTCCTGGG | + |
|
Preference number: 6 (lower is better) Translates to: TSIWKFRYVLSM*LVLFTAEVIPG Trigger: CCCAGGAATCACCTCAGCAGTAAATAAAACCAGCAACATTGACAATACGTACCGAAATTTCCAAATGGAAGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CAA 72 bp | TTACAATTGTGCAACAGCCATTTATGGGACTCAGGATaGAGATCATTGGCAAACACTGTGCAGTTTTTCCTT | + |
|
Preference number: 6 (lower is better) Translates to: LQLCNSHLWDSG*RSLANTVQFFL Trigger: AAGGAAAAACTGCACAGTGTTTGCCAATGATCTCAATCCTGAGTCCCATAAATGGCTGTTGCACAATTGTAA 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS TCA 72 bp | GTACGTATTGTCAATGTTGCTGGTTTTATTTACTGCTaGGGTGATTCCTGGGTTTTTGTCAACCATAACTTG | + |
|
Preference number: 6 (lower is better) Translates to: VRIVNVAGFIYC*GDSWVFVNHNL Trigger: CAAGTTATGGTTGACAAAAACCCAGGAATCACCTCAGCAGTAAATAAAACCAGCAACATTGACAATACGTAC 39% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
||
| CDS CCA 72 bp | ACTTTATTCAGTTTACAATTGTGCAACAGCCATTTATaGGACTCAGGATTGAGATCATTGGCAAACACTGTG | + |
|
Preference number: 6 (lower is better) Translates to: TLFSLQLCNSHL*DSGLRSLANTV Trigger: CACAGTGTTTGCCAATGATCTCAATCCTGAGTCCCATAAATGGCTGTTGCACAATTGTAAACTGAATAAAGT 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS CAA 72 bp | ACTTTCACTTTCTGGTCAACTTTATTCAGTTTACAATaGTGCAACAGCCATTTATGGGACTCAGGATTGAGA | + |
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Preference number: 6 (lower is better) Translates to: TFTFWSTLFSLQ*CNSHLWDSGLR Trigger: TCTCAATCCTGAGTCCCATAAATGGCTGTTGCACAATTGTAAACTGAATAAAGTTGACCAGAAAGTGAAAGT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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| CDS CAA 90 bp | ATGTTAAAGACTTTCACTTTCTGGTCAACTTTATTCAGTTTACAATaGTGCAACAGCCATTTATGGGACTCAGGATTGAGATCATTGGCA | + |
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Preference number: 6 (lower is better) Translates to: MLKTFTFWSTLFSLQ*CNSHLWDSGLRSLA Trigger: TGCCAATGATCTCAATCCTGAGTCCCATAAATGGCTGTTGCACAATTGTAAACTGAATAAAGTTGACCAGAAAGTGAAAGTCTTTAACAT 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000116420.4 |
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