Pregenerated sensors for TRMT44 (Mus musculus)
Ensembl gene IDs: ENSMUSG00000029097Ensembl transcript IDs: ENSMUST00000030980.12, ENSMUST00000128195.3
Found 159 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR TCA 90 bp | AAAGGGCTGAGCAGGCTCCACTGCCTGCAGACACGTCCCAGTGACTaGCAGTGGCTGTGCACACCAACAGCTCATACTGAAGCCAACCCA | + |
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Preference number: 1 (lower is better) Translates to: KGLSRLHCLQTRPSD*QWLCTPTAHTEANP Trigger: TGGGTTGGCTTCAGTATGAGCTGTTGGTGTGCACAGCCACTGTCAGTCACTGGGACGTGTCTGCAGGCAGTGGAGCCTGCTCAGCCCTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR GCA 90 bp | CAAATGGCCAAGGTGGCCATGCTCCAGTTCCTGAACAAGCGTGTTTaGAGGTCGAGCAAGCCTGGGATGGTGCTCAGCAGTCAGCCATCA | + |
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Preference number: 1 (lower is better) Translates to: QMAKVAMLQFLNKRV*RSSKPGMVLSSQPS Trigger: TGATGGCTGACTGCTGAGCACCATCCCAGGCTTGCTCGACCTGCAAACACGCTTGTTCAGGAACTGGAGCATGGCCACCTTGGCCATTTG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR CCA 90 bp | TGTGGTGTCTTCTCCCAGAGCAACCCCGGCTTCAGCTTTGTGACCTaGAAAAGGTGGGAACCTAAGACTGTCCCACCTCTCGGTTTAGCT | + |
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Preference number: 1 (lower is better) Translates to: CGVFSQSNPGFSFVT*KRWEPKTVPPLGLA Trigger: AGCTAAACCGAGAGGTGGGACAGTCTTAGGTTCCCACCTTTTCCAGGTCACAAAGCTGAAGCCGGGGTTGCTCTGGGAGAAGACACCACA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR TCA 90 bp | CCACCTCTCGGTTTAGCTGTCTTAACATGGGTCTCCAGAAAAATCTaGAGCCAGACCCAACACCTCTGGGAACCTTGCCTCATGAAATTC | + |
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Preference number: 1 (lower is better) Translates to: PPLGLAVLTWVSRKI*SQTQHLWEPCLMKF Trigger: GAATTTCATGAGGCAAGGTTCCCAGAGGTGTTGGGTCTGGCTTCAGATTTTTCTGGAGACCCATGTTAAGACAGCTAAACCGAGAGGTGG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR CCA 90 bp | TTCAGAATAACTAACTTTATTCTCACTACTCAGATGACACCAGATTaGTCATCAGAAGTACTTCTACCCCGTGGGGTTTCAAAGACTGAT | + |
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Preference number: 1 (lower is better) Translates to: FRITNFILTTQMTPD*SSEVLLPRGVSKTD Trigger: ATCAGTCTTTGAAACCCCACGGGGTAGAAGTACTTCTGATGACCAATCTGGTGTCATCTGAGTAGTGAGAATAAAGTTAGTTATTCTGAA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR TCA 90 bp | TGCGCAGGCGAGGGAGGGAGCCCTCAGCTCATCTTGAAGGCACTTCTGTGGTGTCTCAGCAGCTGGGCCTaGGACCCATGCTGGCCACCC | + |
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Preference number: 2 (lower is better) Translates to: CAGEGGSPQLILKALLWCLSSWA*DPCWPP Trigger: GGGTGGCCAGCATGGGTCTCAGGCCCAGCTGCTGAG...ACACCACAGAAGTGCCTTCAAGATGAGCTGAGGGCTCCCTCCCTCGCCTGCGCA 64% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR TCA 90 bp | TGCGCAGGCGAGGGAGGGAGCCCTCAGCTCATCTTGAAGGCACTTCTGTGGTGTGCAGTCATAAAGGGCTaGGCAGGCTCCACTGCCTGC | + |
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Preference number: 2 (lower is better) Translates to: CAGEGGSPQLILKALLWCAVIKG*AGSTAC Trigger: GCAGGCAGTGGAGCCTGCTCAGCCCTTTATGACTGC...ACACCACAGAAGTGCCTTCAAGATGAGCTGAGGGCTCCCTCCCTCGCCTGCGCA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR GCA 90 bp | GCCCTGTGCCTCTGCTTGCAGCGATCCTGTGACCATGCTGCAGAGAGCTTCTCTGCAGGCTCCACTGCCTaGAGACACGTCCCAGTGACT | + |
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Preference number: 2 (lower is better) Translates to: ALCLCLQRSCDHAAESFSAGSTA*RHVPVT Trigger: AGTCACTGGGACGTGTCTGCAGGCAGTGGAGCCTGC...AGAGAAGCTCTCTGCAGCATGGTCACAGGATCGCTGCAAGCAGAGGCACAGGGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR TCA 90 bp | ACAAGCGTGTTTGCAGGTCGAGCAAGCCTGGGATGGTGCTCAGCAGTCAGCCATGCAGACACGTCCCAGTaGCTGACAGTGGCTGTGCAC | + |
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Preference number: 2 (lower is better) Translates to: TSVFAGRASLGWCSAVSHADTSQ*LTVAVH Trigger: GTGCACAGCCACTGTCAGTCACTGGGACGTGTCTGC...ATGGCTGACTGCTGAGCACCATCCCAGGCTTGCTCGACCTGCAAACACGCTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR GCA 90 bp | CCTGAACAAGCGTGTTTGCAGGTCGAGCAAGCCTGGGATGGTGCTCAGCAGTCACCCGAGACCAAACCCTaGCTCTCAGACAGGAGGCCA | + |
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Preference number: 2 (lower is better) Translates to: PEQACLQVEQAWDGAQQSPETKP*LSDRRP Trigger: TGGCCTCCTGTCTGAGAGGCAGGGTTTGGTCTCGGG...TGACTGCTGAGCACCATCCCAGGCTTGCTCGACCTGCAAACACGCTTGTTCAGG 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR CAA 90 bp | CCAAATGGCCAAGGTGGCCATGCTCCAGTTCCTGAACAAGCGTGTTaGCAGGTCGAGCAAGCCTGGGATGGTGCTCAGCAGTCAGCCATC | + |
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Preference number: 2 (lower is better) Translates to: PNGQGGHAPVPEQAC*QVEQAWDGAQQSAI Trigger: GATGGCTGACTGCTGAGCACCATCCCAGGCTTGCTCGACCTGCAAACACGCTTGTTCAGGAACTGGAGCATGGCCACCTTGGCCATTTGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR GCA 90 bp | CCTGAACAAGCGTGTTTGCAGGTCGAGCAAGCCTGGGATGGTGCTCAGCAGTCACACCCTGCTCTGGGATaGTGTGAAGCCCTTGGCTCT | + |
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Preference number: 2 (lower is better) Translates to: PEQACLQVEQAWDGAQQSHPALG*CEALGS Trigger: AGAGCCAAGGGCTTCACAGCATCCCAGAGCAGGGTG...TGACTGCTGAGCACCATCCCAGGCTTGCTCGACCTGCAAACACGCTTGTTCAGG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR TCA 90 bp | TGCGCAGGCGAGGGAGGGAGCCCTCAGCTCATCTTGAAGGCACTTCTGTGGTGTGTCTCCAGAAAAATCTaGAGCCAGACCCAACACCTC | + |
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Preference number: 2 (lower is better) Translates to: CAGEGGSPQLILKALLWCVSRKI*SQTQHL Trigger: GAGGTGTTGGGTCTGGCTTCAGATTTTTCTGGAGAC...ACACCACAGAAGTGCCTTCAAGATGAGCTGAGGGCTCCCTCCCTCGCCTGCGCA 57% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR TCA 90 bp | ATGGCCAAGGTGGCCATGCTCCAGTTCCTGAACAAGCGTGTTTGCAGGTCGAGCGCCCTCAGCTCATCTTaGAGGCACTTCTGTGGTGTC | + |
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Preference number: 2 (lower is better) Translates to: MAKVAMLQFLNKRVCRSSALSSS*RHFCGV Trigger: GACACCACAGAAGTGCCTTCAAGATGAGCTGAGGGC...GCTCGACCTGCAAACACGCTTGTTCAGGAACTGGAGCATGGCCACCTTGGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR GCA 90 bp | ATGGCCAAGGTGGCCATGCTCCAGTTCCTGAACAAGCGTGTTTGCAGGTCGAGCCTTCAGAAAGCCCTGTaGCTCTGCTTGCAGCGATCC | + |
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Preference number: 2 (lower is better) Translates to: MAKVAMLQFLNKRVCRSSLQKAL*LCLQRS Trigger: GGATCGCTGCAAGCAGAGGCACAGGGCTTTCTGAAG...GCTCGACCTGCAAACACGCTTGTTCAGGAACTGGAGCATGGCCACCTTGGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR TCA 90 bp | CAGAGCAACCCCGGCTTCAGCTTTGTGACCTGGAAAAGGTGGGAACCTAAGACTAACCCAGCCCCAGCGTaGAGTCATCAGGACAAGGGA | + |
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Preference number: 2 (lower is better) Translates to: QSNPGFSFVTWKRWEPKTNPAPA*SHQDKG Trigger: TCCCTTGTCCTGATGACTTCACGCTGGGGCTGGGTT...AGTCTTAGGTTCCCACCTTTTCCAGGTCACAAAGCTGAAGCCGGGGTTGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCAACCCCGGCTTCAGCTTTGTGACCTGGAAAAGGTGGGAACCTAAGACTTGCAGAGAGCTTCTCTaGAGAGGAGACCTGGGGCAC | + |
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Preference number: 2 (lower is better) Translates to: QSNPGFSFVTWKRWEPKTCRELL*RGDLGH Trigger: GTGCCCCAGGTCTCCTCTGCAGAGAAGCTCTCTGCA...AGTCTTAGGTTCCCACCTTTTCCAGGTCACAAAGCTGAAGCCGGGGTTGCTCTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR CCA 90 bp | ACAAGCGTGTTTGCAGGTCGAGCAAGCCTGGGATGGTGCTCAGCAGTCAGCCATTGTCTAGGGAAGAGGTaGGAGCAAGCTGTAGTTCTC | + |
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Preference number: 2 (lower is better) Translates to: TSVFAGRASLGWCSAVSHCLGKR*EQAVVL Trigger: GAGAACTACAGCTTGCTCCCACCTCTTCCCTAGACA...ATGGCTGACTGCTGAGCACCATCCCAGGCTTGCTCGACCTGCAAACACGCTTGT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR CCA 90 bp | TGCGCAGGCGAGGGAGGGAGCCCTCAGCTCATCTTGAAGGCACTTCTGTGGTGTAAGAGAAGGATCAGGTaGAGACAATGTTCACAGTCA | + |
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Preference number: 2 (lower is better) Translates to: CAGEGGSPQLILKALLWCKRRIR*RQCSQS Trigger: TGACTGTGAACATTGTCTCCACCTGATCCTTCTCTT...ACACCACAGAAGTGCCTTCAAGATGAGCTGAGGGCTCCCTCCCTCGCCTGCGCA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR CCA 90 bp | CCTGAACAAGCGTGTTTGCAGGTCGAGCAAGCCTGGGATGGTGCTCAGCAGTCATTGAAGGCACTTCTGTaGTGTCTTCTCCCAGAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PEQACLQVEQAWDGAQQSLKALL*CLLPEQ Trigger: TTGCTCTGGGAGAAGACACCACAGAAGTGCCTTCAA...TGACTGCTGAGCACCATCCCAGGCTTGCTCGACCTGCAAACACGCTTGTTCAGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR CAA 90 bp | TTCTCACCAGCAACCCTGAGCTCTAACCGTGTGGGCCACAACCATTaGAAGACTCAGAAACCAAATGGCCAAGGTGGCCATGCTCCAGTT | + |
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Preference number: 2 (lower is better) Translates to: FSPATLSSNRVGHNH*KTQKPNGQGGHAPV Trigger: AACTGGAGCATGGCCACCTTGGCCATTTGGTTTCTGAGTCTTCAAATGGTTGTGGCCCACACGGTTAGAGCTCAGGGTTGCTGGTGAGAA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR GCA 90 bp | CAGAGCAACCCCGGCTTCAGCTTTGTGACCTGGAAAAGGTGGGAACCTAAGACTCACCTCTGGGAACCTTaGCTCATGAAATTCCTGGGA | + |
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Preference number: 2 (lower is better) Translates to: QSNPGFSFVTWKRWEPKTHLWEP*LMKFLG Trigger: TCCCAGGAATTTCATGAGGCAAGGTTCCCAGAGGTG...AGTCTTAGGTTCCCACCTTTTCCAGGTCACAAAGCTGAAGCCGGGGTTGCTCTG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR TCA 72 bp | GCACACTCATGCAGGGGCTCTGGAAGCTATCCTCACTaGATGCAGGCCCTGCGCAGGCGAGGGAGGGAGCCC | + |
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Preference number: 3 (lower is better) Translates to: AHSCRGSGSYPH*MQALRRRGREP Trigger: GGGCTCCCTCCCTCGCCTGCGCAGGGCCTGCATTCAGTGAGGATAGCTTCCAGAGCCCCTGCATGAGTGTGC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR GCA 72 bp | GGGGCTCTGGAAGCTATCCTCACTGAATGCAGGCCCTaGGCAGGCGAGGGAGGGAGCCCTCAGCTCATCTTG | + |
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Preference number: 3 (lower is better) Translates to: GALEAILTECRP*AGEGGSPQLIL Trigger: CAAGATGAGCTGAGGGCTCCCTCCCTCGCCTGCGCAGGGCCTGCATTCAGTGAGGATAGCTTCCAGAGCCCC 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR GCA 72 bp | ACTCATGCAGGGGCTCTGGAAGCTATCCTCACTGAATaGAGGCCCTGCGCAGGCGAGGGAGGGAGCCCTCAG | + |
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Preference number: 3 (lower is better) Translates to: THAGALEAILTE*RPCAGEGGSPQ Trigger: CTGAGGGCTCCCTCCCTCGCCTGCGCAGGGCCTGCATTCAGTGAGGATAGCTTCCAGAGCCCCTGCATGAGT 64% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR TCA 72 bp | AGGTGGGAGCAAGCTGTAGTTCTCAGCAGCTGGGCCTaGGACCCATGCTGGCCACCCTGCTCTGGGATGCTG | + |
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Preference number: 3 (lower is better) Translates to: RWEQAVVLSSWA*DPCWPPCSGML Trigger: CAGCATCCCAGAGCAGGGTGGCCAGCATGGGTCTCAGGCCCAGCTGCTGAGAACTACAGCTTGCTCCCACCT 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR TCA 72 bp | CCTGCGCAGGCGAGGGAGGGAGCCCTCAGCTCATCTTaGAGGCACTTCTGTGGTGTCTTCTCCCAGAGCAAC | + |
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Preference number: 3 (lower is better) Translates to: PAQAREGALSSS*RHFCGVFSQSN Trigger: GTTGCTCTGGGAGAAGACACCACAGAAGTGCCTTCAAGATGAGCTGAGGGCTCCCTCCCTCGCCTGCGCAGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR TCA 72 bp | GCTGAGCAGGCTCCACTGCCTGCAGACACGTCCCAGTaGCTGACAGTGGCTGTGCACACCAACAGCTCATAC | + |
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Preference number: 3 (lower is better) Translates to: AEQAPLPADTSQ*LTVAVHTNSSY Trigger: GTATGAGCTGTTGGTGTGCACAGCCACTGTCAGTCACTGGGACGTGTCTGCAGGCAGTGGAGCCTGCTCAGC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR CCA 72 bp | CAGCTGGGCCTGAGACCCATGCTGGCCACCCTGCTCTaGGATGCTGTGAAGCCCTTGGCTCTTCAGAATAAC | + |
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Preference number: 3 (lower is better) Translates to: QLGLRPMLATLL*DAVKPLALQNN Trigger: GTTATTCTGAAGAGCCAAGGGCTTCACAGCATCCCAGAGCAGGGTGGCCAGCATGGGTCTCAGGCCCAGCTG 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR TCA 72 bp | TCAGAAAGCCCTGTGCCTCTGCTTGCAGCGATCCTGTaGCCATGCTGCAGAGAGCTTCTCTGCAGAGGAGAC | + |
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Preference number: 3 (lower is better) Translates to: SESPVPLLAAIL*PCCRELLCRGD Trigger: GTCTCCTCTGCAGAGAAGCTCTCTGCAGCATGGTCACAGGATCGCTGCAAGCAGAGGCACAGGGCTTTCTGA 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR GCA 72 bp | AAGGTGGCCATGCTCCAGTTCCTGAACAAGCGTGTTTaGAGGTCGAGCAAGCCTGGGATGGTGCTCAGCAGT | + |
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Preference number: 3 (lower is better) Translates to: KVAMLQFLNKRV*RSSKPGMVLSS Trigger: ACTGCTGAGCACCATCCCAGGCTTGCTCGACCTGCAAACACGCTTGTTCAGGAACTGGAGCATGGCCACCTT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR TCA 72 bp | GAAACCAAATGGCCAAGGTGGCCATGCTCCAGTTCCTaGACAAGCGTGTTTGCAGGTCGAGCAAGCCTGGGA | + |
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Preference number: 3 (lower is better) Translates to: ETKWPRWPCSSS*TSVFAGRASLG Trigger: TCCCAGGCTTGCTCGACCTGCAAACACGCTTGTTCAGGAACTGGAGCATGGCCACCTTGGCCATTTGGTTTC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR CCA 72 bp | TTCTCCCAGAGCAACCCCGGCTTCAGCTTTGTGACCTaGAAAAGGTGGGAACCTAAGACTGTCCCACCTCTC | + |
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Preference number: 3 (lower is better) Translates to: FSQSNPGFSFVT*KRWEPKTVPPL Trigger: GAGAGGTGGGACAGTCTTAGGTTCCCACCTTTTCCAGGTCACAAAGCTGAAGCCGGGGTTGCTCTGGGAGAA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR GCA 72 bp | AAGAGAAGGATCAGGTGGAGACAATGTTCACAGTCATaGCTCGAACACCGGGTGGCTGGGAGTGACTCTGGA | + |
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Preference number: 3 (lower is better) Translates to: KRRIRWRQCSQS*LEHRVAGSDSG Trigger: TCCAGAGTCACTCCCAGCCACCCGGTGTTCGAGGCATGACTGTGAACATTGTCTCCACCTGATCCTTCTCTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR CCA 72 bp | AGCAACCCCGGCTTCAGCTTTGTGACCTGGAAAAGGTaGGAACCTAAGACTGTCCCACCTCTCGGTTTAGCT | + |
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Preference number: 3 (lower is better) Translates to: SNPGFSFVTWKR*EPKTVPPLGLA Trigger: AGCTAAACCGAGAGGTGGGACAGTCTTAGGTTCCCACCTTTTCCAGGTCACAAAGCTGAAGCCGGGGTTGCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR CAA 90 bp | CACATGGTAGGACCTGGTTTAACAGAACAGCAATGCAGCAGAGAGATAGGCATGGCCCTGTGCCTCTGCTaGCAGCGATCCTGTGACCAT | + |
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Preference number: 3 (lower is better) Translates to: HMVGPGLTEQQCSREIGMALCLC*QRSCDH Trigger: ATGGTCACAGGATCGCTGCAAGCAGAGGCACAGGGC...CATGCCTATCTCTCTGCTGCATTGCTGTTCTGTTAAACCAGGTCCTACCATGTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR-3UTR CAA 90 bp | ACAAGCGTGTTTGCAGGTCGAGCAAGCCTGGGATGGTGCTCAGCAGTCAGCCATTCAGATGACACCAGATaGGTCATCAGAAGTACTTCT | + |
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Preference number: 3 (lower is better) Translates to: TSVFAGRASLGWCSAVSHSDDTR*VIRSTS Trigger: AGAAGTACTTCTGATGACCAATCTGGTGTCATCTGA...ATGGCTGACTGCTGAGCACCATCCCAGGCTTGCTCGACCTGCAAACACGCTTGT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR TCA 72 bp | GAAGCCAGACCCAACACCTCTGGGAACCTTGCCTCATaGAATTCCTGGGAACCATTAGATTTCCAGGCACCT | + |
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Preference number: 3 (lower is better) Translates to: EARPNTSGNLAS*NSWEPLDFQAP Trigger: AGGTGCCTGGAAATCTAATGGTTCCCAGGAATTTCATGAGGCAAGGTTCCCAGAGGTGTTGGGTCTGGCTTC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR TCA 72 bp | GGTTTAGCTGTCTTAACATGGGTCTCCAGAAAAATCTaGAGCCAGACCCAACACCTCTGGGAACCTTGCCTC | + |
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Preference number: 3 (lower is better) Translates to: GLAVLTWVSRKI*SQTQHLWEPCL Trigger: GAGGCAAGGTTCCCAGAGGTGTTGGGTCTGGCTTCAGATTTTTCTGGAGACCCATGTTAAGACAGCTAAACC 50% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR CCA 72 bp | ACTAACTTTATTCTCACTACTCAGATGACACCAGATTaGTCATCAGAAGTACTTCTACCCCGTGGGGTTTCA | + |
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Preference number: 3 (lower is better) Translates to: TNFILTTQMTPD*SSEVLLPRGVS Trigger: TGAAACCCCACGGGGTAGAAGTACTTCTGATGACCAATCTGGTGTCATCTGAGTAGTGAGAATAAAGTTAGT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS-3UTR CCA 90 bp | GGAGCAAGCTGTAGTTCTCAGCAGCTGGGCCTGAGACCCATGCTGGCCACCCTGGGTCCACACTCCGCCTaGGCGTGGGACCGCAAAGTT | + |
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Preference number: 4 (lower is better) Translates to: GASCSSQQLGLRPMLATLGPHSA*AWDRKV Trigger: AACTTTGCGGTCCCACGCCCAGGCGGAGTGTGGACC...CAGGGTGGCCAGCATGGGTCTCAGGCCCAGCTGCTGAGAACTACAGCTTGCTCC 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS-3UTR CCA 90 bp | TGCGCAGGCGAGGGAGGGAGCCCTCAGCTCATCTTGAAGGCACTTCTGTGGTGTGGCCGGCTCTGTGGATaGCCCTGTCTGCTGTGCAGG | + |
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Preference number: 4 (lower is better) Translates to: CAGEGGSPQLILKALLWCGRLCG*PCLLCR Trigger: CCTGCACAGCAGACAGGGCCATCCACAGAGCCGGCC...ACACCACAGAAGTGCCTTCAAGATGAGCTGAGGGCTCCCTCCCTCGCCTGCGCA 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS-3UTR CCA 90 bp | ATGGCCAAGGTGGCCATGCTCCAGTTCCTGAACAAGCGTGTTTGCAGGTCGAGCAGGCACCCAGAGTCCTaGGGCTGGGGCTCCAGCTCC | + |
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Preference number: 4 (lower is better) Translates to: MAKVAMLQFLNKRVCRSSRHPES*GWGSSS Trigger: GGAGCTGGAGCCCCAGCCCCAGGACTCTGGGTGCCT...GCTCGACCTGCAAACACGCTTGTTCAGGAACTGGAGCATGGCCACCTTGGCCAT 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS-3UTR GCA 90 bp | TTCCTGTTCTCCACCGCCCACCTGGCCAGCTTGGACAGCAGTTCTTCTCCGAGCTCTGTGAGTGGGGAGTaGGGGCTCGCTTTCGGGATG | + |
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Preference number: 4 (lower is better) Translates to: FLFSTAHLASLDSSSSPSSVSGE*GLAFGM Trigger: CATCCCGAAAGCGAGCCCGCACTCCCCACTCACAGA...GCTCGGAGAAGAACTGCTGTCCAAGCTGGCCAGGTGGGCGGTGGAGAACAGGAA 61% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000128195.3 |
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| CDS-3UTR CCA 90 bp | CTCTTCCTGTTCTCCACCGCCCACCTGGCCAGCTTGGACAGCAGTTCTTCTCCGCTTCGGCTCTGTGAGTaGGGAGTGCGGGCTCGCTTT | + |
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Preference number: 4 (lower is better) Translates to: LFLFSTAHLASLDSSSSPLRLCE*GVRARF Trigger: AAAGCGAGCCCGCACTCCCCACTCACAGAGCCGAAG...CGGAGAAGAACTGCTGTCCAAGCTGGCCAGGTGGGCGGTGGAGAACAGGAAGAG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128195.3 |
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| 3UTR CAA 72 bp | CCCTGCGCAGGCGAGGGAGGGAGCCCTCAGCTCATCTaGAAGGCACTTCTGTGGTGTCTTCTCCCAGAGCAA | + |
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Preference number: 4 (lower is better) Translates to: PCAGEGGSPQLI*KALLWCLLPEQ Trigger: TTGCTCTGGGAGAAGACACCACAGAAGTGCCTTCAAGATGAGCTGAGGGCTCCCTCCCTCGCCTGCGCAGGG 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| 3UTR CAA 72 bp | TCGCTCTTCCTGTTCTCCACCGCCCACCTGGCCAGCTaGGACAGCAGTTCTTCTCCGAGCCAGGCAGGCTTA | + |
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Preference number: 4 (lower is better) Translates to: SLFLFSTAHLAS*DSSSSPSQAGL Trigger: TAAGCCTGCCTGGCTCGGAGAAGAACTGCTGTCCAAGCTGGCCAGGTGGGCGGTGGAGAACAGGAAGAGCGA 61% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128195.3 |
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| CDS-3UTR GCA 90 bp | GGAGCAAGCTGTAGTTCTCAGCAGCTGGGCCTGAGACCCATGCTGGCCACCCTGGGTACTGTGTCTTCCTaGTCTGCTGCCGCTGGTATC | + |
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Preference number: 4 (lower is better) Translates to: GASCSSQQLGLRPMLATLGTVSS*SAAAGI Trigger: GATACCAGCGGCAGCAGAGCAGGAAGACACAGTACC...CAGGGTGGCCAGCATGGGTCTCAGGCCCAGCTGCTGAGAACTACAGCTTGCTCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS-3UTR GCA 90 bp | TATAGGCATAGTCCATCCGAGACTGGTGACAGCACTGCCTGGGGCAGACTGTCACTGCGGTGCAGAAGGTaGATGTGCCCCTCCAGGCCG | + |
|
Preference number: 4 (lower is better) Translates to: YRHSPSETGDSTAWGRLSLRCRR*MCPSRP Trigger: CGGCCTGGAGGGGCACATGCACCTTCTGCACCGCAG...TGACAGTCTGCCCCAGGCAGTGCTGTCACCAGTCTCGGATGGACTATGCCTATA 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CCA 90 bp | CTGCAGAGGAGACCTGGGGCACACAGCCCCAAGAATGAGAAGGTCAGATCTGCATCCAGGCCGGCTCTGTaGATGGCCCTGTCTGCTGTG | + |
|
Preference number: 4 (lower is better) Translates to: LQRRPGAHSPKNEKVRSASRPAL*MALSAV Trigger: CACAGCAGACAGGGCCATCCACAGAGCCGGCCTGGA...TGCAGATCTGACCTTCTCATTCTTGGGGCTGTGTGCCCCAGGTCTCCTCTGCAG 60% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR GCA 90 bp | CCTGAACAAGCGTGTTTGCAGGTCGAGCAAGCCTGGGATGGTGCTCAGCAGTCATCTGTGAGTGGGGAGTaGGGGCTCGCTTTCGGGATG | + |
|
Preference number: 4 (lower is better) Translates to: PEQACLQVEQAWDGAQQSSVSGE*GLAFGM Trigger: CATCCCGAAAGCGAGCCCGCACTCCCCACTCACAGA...TGACTGCTGAGCACCATCCCAGGCTTGCTCGACCTGCAAACACGCTTGTTCAGG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR GCA 90 bp | CTGCAGAGGAGACCTGGGGCACACAGCCCCAAGAATGAGAAGGTCAGATCTGCACTGAGGCAGTCCTCCTaGACGTGGAAGCCACAGGAG | + |
|
Preference number: 4 (lower is better) Translates to: LQRRPGAHSPKNEKVRSALRQSS*TWKPQE Trigger: CTCCTGTGGCTTCCACGTGCAGGAGGACTGCCTCAG...TGCAGATCTGACCTTCTCATTCTTGGGGCTGTGTGCCCCAGGTCTCCTCTGCAG 59% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CCA 90 bp | ACAAGCGTGTTTGCAGGTCGAGCAAGCCTGGGATGGTGCTCAGCAGTCAGCCATTCTCCACCGCCCACCTaGCCAGCTTGGACAGCAGTT | + |
|
Preference number: 4 (lower is better) Translates to: TSVFAGRASLGWCSAVSHSPPPT*PAWTAV Trigger: AACTGCTGTCCAAGCTGGCCAGGTGGGCGGTGGAGA...ATGGCTGACTGCTGAGCACCATCCCAGGCTTGCTCGACCTGCAAACACGCTTGT 59% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR GCA 90 bp | AAACCCTGCCTCTCAGACAGGAGGCCAGGCTGCGAAAGGGCTCTACAGCTTCTAGTCTCGAGGGAGGGCTaGACAATTCCTCACACGCTC | + |
|
Preference number: 4 (lower is better) Translates to: KPCLSDRRPGCERALQLLVSREG*TIPHTL Trigger: GAGCGTGTGAGGAATTGTGCAGCCCTCCCTCGAGAC...TAGAAGCTGTAGAGCCCTTTCGCAGCCTGGCCTCCTGTCTGAGAGGCAGGGTTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| 3UTR CAA 72 bp | CAAGGTGGCCATGCTCCAGTTCCTGAACAAGCGTGTTaGCAGGTCGAGCAAGCCTGGGATGGTGCTCAGCAG | + |
|
Preference number: 4 (lower is better) Translates to: QGGHAPVPEQAC*QVEQAWDGAQQ Trigger: CTGCTGAGCACCATCCCAGGCTTGCTCGACCTGCAAACACGCTTGTTCAGGAACTGGAGCATGGCCACCTTG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR GCA 90 bp | ATGGCCAAGGTGGCCATGCTCCAGTTCCTGAACAAGCGTGTTTGCAGGTCGAGCTTCTGCAGCCACTTCTaGCAAGGAAAGGCTCCCTCC | + |
|
Preference number: 4 (lower is better) Translates to: MAKVAMLQFLNKRVCRSSFCSHF*QGKAPS Trigger: GGAGGGAGCCTTTCCTTGGCAGAAGTGGCTGCAGAA...GCTCGACCTGCAAACACGCTTGTTCAGGAACTGGAGCATGGCCACCTTGGCCAT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CCA 90 bp | CAGAGCAACCCCGGCTTCAGCTTTGTGACCTGGAAAAGGTGGGAACCTAAGACTCTTCGGCTCTGTGAGTaGGGAGTGCGGGCTCGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QSNPGFSFVTWKRWEPKTLRLCE*GVRARF Trigger: AAAGCGAGCCCGCACTCCCCACTCACAGAGCCGAAG...AGTCTTAGGTTCCCACCTTTTCCAGGTCACAAAGCTGAAGCCGGGGTTGCTCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CCA 90 bp | TATAGGCATAGTCCATCCGAGACTGGTGACAGCACTGCCTGGGGCAGACTGTCAGTTCTGCTTGGCTTCTaGAGGCTTTCCCCTCTGCAG | + |
|
Preference number: 4 (lower is better) Translates to: YRHSPSETGDSTAWGRLSVLLGF*RLSPLQ Trigger: CTGCAGAGGGGAAAGCCTCCAGAAGCCAAGCAGAAC...TGACAGTCTGCCCCAGGCAGTGCTGTCACCAGTCTCGGATGGACTATGCCTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CCA 90 bp | TATAGGCATAGTCCATCCGAGACTGGTGACAGCACTGCCTGGGGCAGACTGTCACAGCCATCAGGATGGTaGGCGAAGAACCAGCAGATC | + |
|
Preference number: 4 (lower is better) Translates to: YRHSPSETGDSTAWGRLSQPSGW*AKNQQI Trigger: GATCTGCTGGTTCTTCGCCCACCATCCTGATGGCTG...TGACAGTCTGCCCCAGGCAGTGCTGTCACCAGTCTCGGATGGACTATGCCTATA 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CCA 90 bp | AAAAGAAACCACCACCCAAAGCAGGGAAGCTGCCAGGGCCCTTACCTTGTAAGTTGGGCAAAGGGGCATTaGGCAGCAGGCAGTACGCAG | + |
|
Preference number: 4 (lower is better) Translates to: KRNHHPKQGSCQGPYLVSWAKGH*AAGSTQ Trigger: CTGCGTACTGCCTGCTGCCCAATGCCCCTTTGCCCA...ACTTACAAGGTAAGGGCCCTGGCAGCTTCCCTGCTTTGGGTGGTGGTTTCTTTT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR TCA 90 bp | AAAAGAAACCACCACCCAAAGCAGGGAAGCTGCCAGGGCCCTTACCTTGTAAGTCTTCTTCAAGGTCTGTaGCAGGCGCAGCTCTTCGGG | + |
|
Preference number: 4 (lower is better) Translates to: KRNHHPKQGSCQGPYLVSLLQGL*QAQLFG Trigger: CCCGAAGAGCTGCGCCTGTCACAGACCTTGAAGAAG...ACTTACAAGGTAAGGGCCCTGGCAGCTTCCCTGCTTTGGGTGGTGGTTTCTTTT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CCA 90 bp | GCCCCTATGGACATGGGAGAAAAGGCAATTATAGGCATAGTCCATCCGAGACTGCGCACAGCCTCTTGTTaGCCACCTGTGGCCTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: APMDMGEKAIIGIVHPRLRTASC*PPVASP Trigger: TGGAGAGGCCACAGGTGGCCAACAAGAGGCTGTGCG...CAGTCTCGGATGGACTATGCCTATAATTGCCTTTTCTCCCATGTCCATAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CCA 90 bp | GAAAAACTGTCCAATAGCCCTGGGGAGAAGGTTCTAAAGAGAAGGATCAGGTGGCAGTCCTCCTGCACGTaGAAGCCACAGGAGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EKLSNSPGEKVLKRRIRWQSSCT*KPQESP Trigger: GGGGCTCTCCTGTGGCTTCCACGTGCAGGAGGACTG...CCACCTGATCCTTCTCTTTAGAACCTTCTCCCCAGGGCTATTGGACAGTTTTTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR GCA 90 bp | AAAAGAAACCACCACCCAAAGCAGGGAAGCTGCCAGGGCCCTTACCTTGTAAGTATCCCTCTACCTGGGTaGCCCTCGTTGCTCAAGATG | + |
|
Preference number: 4 (lower is better) Translates to: KRNHHPKQGSCQGPYLVSIPLPG*PSLLKM Trigger: CATCTTGAGCAACGAGGGGCACCCAGGTAGAGGGAT...ACTTACAAGGTAAGGGCCCTGGCAGCTTCCCTGCTTTGGGTGGTGGTTTCTTTT 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR GCA 90 bp | GAAGTACTTCTACCCCGTGGGGTTTCAAAGACTGATCCCAGGACATTTAGCTCATGTGTCTTCCTGCTCTaGTGCCGCTGGTATCGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: EVLLPRGVSKTDPRTFSSCVFLL*CRWYRP Trigger: GGGGCGATACCAGCGGCAGCAGAGCAGGAAGACACA...TGAGCTAAATGTCCTGGGATCAGTCTTTGAAACCCCACGGGGTAGAAGTACTTC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CCA 90 bp | CAACAGCTCATACTGAAGCCAACCCAGCCCCAGCGTGAAGTCATCAGGACAAGGACCTGCAAAACCACTTaGTCAACGAAGTCTCGAGGG | + |
|
Preference number: 4 (lower is better) Translates to: QQLILKPTQPQREVIRTRTCKTT*STKSRG Trigger: CCCTCGAGACTTCGTTGACCAAGTGGTTTTGCAGGT...CCTTGTCCTGATGACTTCACGCTGGGGCTGGGTTGGCTTCAGTATGAGCTGTTG 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR GCA 90 bp | TGTAGGACTCTGATAATGACTTCAGAAAGCCCTGTGCCTCTGCTTGCAGCGATCGTAGGAAGACCTGGCTaGAATGACAGGGATCCAGGG | + |
|
Preference number: 4 (lower is better) Translates to: CRTLIMTSESPVPLLAAIVGRPG*NDRDPG Trigger: CCCTGGATCCCTGTCATTGCAGCCAGGTCTTCCTAC...GATCGCTGCAAGCAGAGGCACAGGGCTTTCTGAAGTCATTATCAGAGTCCTACA 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CCA 90 bp | GAAGTACTTCTACCCCGTGGGGTTTCAAAGACTGATCCCAGGACATTTAGCTCACCCACCTGGCCAGCTTaGACAGCAGTTCTTCTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: EVLLPRGVSKTDPRTFSSPTWPA*TAVLLR Trigger: TCGGAGAAGAACTGCTGTCCAAGCTGGCCAGGTGGG...TGAGCTAAATGTCCTGGGATCAGTCTTTGAAACCCCACGGGGTAGAAGTACTTC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR GCA 90 bp | GAAGTACTTCTACCCCGTGGGGTTTCAAAGACTGATCCCAGGACATTTAGCTCACAGGGAGCCTGCCTCTaGTTCTTCAAGGTCTGTGAC | + |
|
Preference number: 4 (lower is better) Translates to: EVLLPRGVSKTDPRTFSSQGACL*FFKVCD Trigger: GTCACAGACCTTGAAGAAGCAGAGGCAGGCTCCCTG...TGAGCTAAATGTCCTGGGATCAGTCTTTGAAACCCCACGGGGTAGAAGTACTTC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR GCA 90 bp | TATAGGCATAGTCCATCCGAGACTGGTGACAGCACTGCCTGGGGCAGACTGTCAACAACACCATCTGAATaGCATCTCTCTGGACAGAAA | + |
|
Preference number: 4 (lower is better) Translates to: YRHSPSETGDSTAWGRLSTTPSE*HLSGQK Trigger: TTTCTGTCCAGAGAGATGGCATTCAGATGGTGTTGT...TGACAGTCTGCCCCAGGCAGTGCTGTCACCAGTCTCGGATGGACTATGCCTATA 50% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CCA 90 bp | TTCAGAATAACTAACTTTATTCTCACTACTCAGATGACACCAGATTGGTCATCACCAGAGTCCTGGGGCTaGGGCTCCAGCTCCTCGCTC | + |
|
Preference number: 4 (lower is better) Translates to: FRITNFILTTQMTPDWSSPESWG*GSSSSL Trigger: GAGCGAGGAGCTGGAGCCCCAGCCCCAGGACTCTGG...TGATGACCAATCTGGTGTCATCTGAGTAGTGAGAATAAAGTTAGTTATTCTGAA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CCA 90 bp | CACATGGTAGGACCTGGTTTAACAGAACAGCAATGCAGCAGAGAGATAGGCATGAGGGCTTCAGACTCCTaGCTTCAGAGTTTCCTGTGT | + |
|
Preference number: 4 (lower is better) Translates to: HMVGPGLTEQQCSREIGMRASDS*LQSFLC Trigger: ACACAGGAAACTCTGAAGCCAGGAGTCTGAAGCCCT...CATGCCTATCTCTCTGCTGCATTGCTGTTCTGTTAAACCAGGTCCTACCATGTG 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CCA 90 bp | GAAGTACTTCTACCCCGTGGGGTTTCAAAGACTGATCCCAGGACATTTAGCTCATCGTTGCTCAAGATGTaGACCAGAAGGCCATTTCCA | + |
|
Preference number: 4 (lower is better) Translates to: EVLLPRGVSKTDPRTFSSSLLKM*TRRPFP Trigger: TGGAAATGGCCTTCTGGTCCACATCTTGAGCAACGA...TGAGCTAAATGTCCTGGGATCAGTCTTTGAAACCCCACGGGGTAGAAGTACTTC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR GCA 90 bp | GAAGTACTTCTACCCCGTGGGGTTTCAAAGACTGATCCCAGGACATTTAGCTCAAACAAGTTTGCCACCTaGAAAACCACTTGGTCAACG | + |
|
Preference number: 4 (lower is better) Translates to: EVLLPRGVSKTDPRTFSSNKFAT*KTTWST Trigger: CGTTGACCAAGTGGTTTTGCAGGTGGCAAACTTGTT...TGAGCTAAATGTCCTGGGATCAGTCTTTGAAACCCCACGGGGTAGAAGTACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS-3UTR TCA 90 bp | GAAGTACTTCTACCCCGTGGGGTTTCAAAGACTGATCCCAGGACATTTAGCTCACAGAGTTTCCTGTGTTaGACTTCTTTCTATCTAACA | + |
|
Preference number: 4 (lower is better) Translates to: EVLLPRGVSKTDPRTFSSQSFLC*TSFYLT Trigger: TGTTAGATAGAAAGAAGTTCAACACAGGAAACTCTG...TGAGCTAAATGTCCTGGGATCAGTCTTTGAAACCCCACGGGGTAGAAGTACTTC 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS-3UTR TCA 90 bp | TTCAGAATAACTAACTTTATTCTCACTACTCAGATGACACCAGATTGGTCATCAATAGACAACACCATCTaGATGCCATCTCTCTGGACA | + |
|
Preference number: 4 (lower is better) Translates to: FRITNFILTTQMTPDWSSIDNTI*MPSLWT Trigger: TGTCCAGAGAGATGGCATTCAGATGGTGTTGTCTAT...TGATGACCAATCTGGTGTCATCTGAGTAGTGAGAATAAAGTTAGTTATTCTGAA 39% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CCA 90 bp | TTCAGAATAACTAACTTTATTCTCACTACTCAGATGACACCAGATTGGTCATCAGTGAGCTCATCAGAATaGTTACCAATCAGCCAATCA | + |
|
Preference number: 4 (lower is better) Translates to: FRITNFILTTQMTPDWSSVSSSE*LPISQS Trigger: TGATTGGCTGATTGGTAACCATTCTGATGAGCTCAC...TGATGACCAATCTGGTGTCATCTGAGTAGTGAGAATAAAGTTAGTTATTCTGAA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR TCA 90 bp | TTCAGAATAACTAACTTTATTCTCACTACTCAGATGACACCAGATTGGTCATCAAGAACTTCAAACACTTaGTGGCTATTCTTGAGAAGG | + |
|
Preference number: 4 (lower is better) Translates to: FRITNFILTTQMTPDWSSRTSNT*WLFLRR Trigger: CCTTCTCAAGAATAGCCATCAAGTGTTTGAAGTTCT...TGATGACCAATCTGGTGTCATCTGAGTAGTGAGAATAAAGTTAGTTATTCTGAA 37% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 90 bp | CTCTCCAGCCCGTGTCCCTGTCCCTGCCGCGGTCCACACTCCGCCTaGGCGTGGGACCGCAAAGTTCTCCCGCGGGCTTCCATGCGGGCG | + |
|
Preference number: 5 (lower is better) Translates to: LSSPCPCPCRGPHSA*AWDRKVLPRASMRA Trigger: CGCCCGCATGGAAGCCCGCGGGAGAACTTTGCGGTCCCACGCCCAGGCGGAGTGTGGACCGCGGCAGGGACAGGGACACGGGCTGGAGAG 72% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 90 bp | GCGGGCTTCCATGCGGGCGCCGCACAGCCTCTTGTTGGCCACCTGTaGCCTCTCCAGCCACACGGTCACGGCGGCCCAGAAGCCTGCAGG | + |
|
Preference number: 5 (lower is better) Translates to: AGFHAGAAQPLVGHL*PLQPHGHGGPEACR Trigger: CCTGCAGGCTTCTGGGCCGCCGTGACCGTGTGGCTGGAGAGGCCACAGGTGGCCAACAAGAGGCTGTGCGGCGCCCGCATGGAAGCCCGC 71% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS GCA 90 bp | ACTCCGCCTGGGCGTGGGACCGCAAAGTTCTCCCGCGGGCTTCCATaGGGGCGCCGCACAGCCTCTTGTTGGCCACCTGTGGCCTCTCCA | + |
|
Preference number: 5 (lower is better) Translates to: TPPGRGTAKFSRGLP*GRRTASCWPPVASP Trigger: TGGAGAGGCCACAGGTGGCCAACAAGAGGCTGTGCGGCGCCCGCATGGAAGCCCGCGGGAGAACTTTGCGGTCCCACGCCCAGGCGGAGT 69% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 90 bp | CCACAGAGGAAGGCCAGCATTTCCGGATTGGCGTGGACGAGGCTTTaGGAGACTCGGTCCCATAGCGAGTTCAGGTCAGCCGCGGGAGCG | + |
|
Preference number: 5 (lower is better) Translates to: PQRKASISGLAWTRL*ETRSHSEFRSAAGA Trigger: CGCTCCCGCGGCTGACCTGAACTCGCTATGGGACCGAGTCTCCCAAAGCCTCGTCCACGCCAATCCGGAAATGCTGGCCTTCCTCTGTGG 63% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 90 bp | GTCTGTGACAGGCGCAGCTCTTCGGGCCCATGGGCAAAGGGGCATTaGGCAGCAGGCAGTACGCAGCCATCAGGATGGTGGGCGAAGAAC | + |
|
Preference number: 5 (lower is better) Translates to: VCDRRSSSGPWAKGH*AAGSTQPSGWWAKN Trigger: GTTCTTCGCCCACCATCCTGATGGCTGCGTACTGCCTGCTGCCCAATGCCCCTTTGCCCATGGGCCCGAAGAGCTGCGCCTGTCACAGAC 63% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 90 bp | TGCGGTGCAGAAGGTGCATGTGCCCCTCCAGGCCGGCTCTGTGGATaGCCCTGTCTGCTGTGCAGGTATCGCGTTCTCTGCTCATCCATC | + |
|
Preference number: 5 (lower is better) Translates to: CGAEGACAPPGRLCG*PCLLCRYRVLCSSI Trigger: GATGGATGAGCAGAGAACGCGATACCTGCACAGCAGACAGGGCCATCCACAGAGCCGGCCTGGAGGGGCACATGCACCTTCTGCACCGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS TCA 90 bp | ATGACAGTCCTGAGAATCAGGTCGAGCTCCTGCGCGGCTTCAGGCTaGGGACCCAACGAGGGGCCACAGAGGAAGGCCAGCATTTCCGGA | + |
|
Preference number: 5 (lower is better) Translates to: MTVLRIRSSSCAASG*GPNEGPQRKASISG Trigger: TCCGGAAATGCTGGCCTTCCTCTGTGGCCCCTCGTTGGGTCCTCAGCCTGAAGCCGCGCAGGAGCTCGACCTGATTCTCAGGACTGTCAT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS GCA 90 bp | AAGGTGCATGTGCCCCTCCAGGCCGGCTCTGTGGATGGCCCTGTCTaGTGTGCAGGTATCGCGTTCTCTGCTCATCCATCCAGACCTCTG | + |
|
Preference number: 5 (lower is better) Translates to: KVHVPLQAGSVDGPV*CAGIAFSAHPSRPL Trigger: CAGAGGTCTGGATGGATGAGCAGAGAACGCGATACCTGCACAGCAGACAGGGCCATCCACAGAGCCGGCCTGGAGGGGCACATGCACCTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 90 bp | CCCAACGAGGGGCCACAGAGGAAGGCCAGCATTTCCGGATTGGCGTaGACGAGGCTTTGGGAGACTCGGTCCCATAGCGAGTTCAGGTCA | + |
|
Preference number: 5 (lower is better) Translates to: PNEGPQRKASISGLA*TRLWETRSHSEFRS Trigger: TGACCTGAACTCGCTATGGGACCGAGTCTCCCAAAGCCTCGTCCACGCCAATCCGGAAATGCTGGCCTTCCTCTGTGGCCCCTCGTTGGG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 90 bp | GAGGACCCAACGAGGGGCCACAGAGGAAGGCCAGCATTTCCGGATTaGCGTGGACGAGGCTTTGGGAGACTCGGTCCCATAGCGAGTTCA | + |
|
Preference number: 5 (lower is better) Translates to: EDPTRGHRGRPAFPD*RGRGFGRLGPIASS Trigger: TGAACTCGCTATGGGACCGAGTCTCCCAAAGCCTCGTCCACGCCAATCCGGAAATGCTGGCCTTCCTCTGTGGCCCCTCGTTGGGTCCTC 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 90 bp | CTCTGCTTCTTCAAGGTCTGTGACAGGCGCAGCTCTTCGGGCCCATaGGCAAAGGGGCATTGGGCAGCAGGCAGTACGCAGCCATCAGGA | + |
|
Preference number: 5 (lower is better) Translates to: LCFFKVCDRRSSSGP*AKGHWAAGSTQPSG Trigger: TCCTGATGGCTGCGTACTGCCTGCTGCCCAATGCCCCTTTGCCCATGGGCCCGAAGAGCTGCGCCTGTCACAGACCTTGAAGAAGCAGAG 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS GCA 90 bp | ATGAGGCAGACCCGCTTAGTAGAAGGAATCCTGAGGCAGTCCTCCTaGACGTGGAAGCCACAGGAGAGCCCCACCTCCAGCACAAAGTCC | + |
|
Preference number: 5 (lower is better) Translates to: MRQTRLVEGILRQSS*TWKPQESPTSSTKS Trigger: GGACTTTGTGCTGGAGGTGGGGCTCTCCTGTGGCTTCCACGTGCAGGAGGACTGCCTCAGGATTCCTTCTACTAAGCGGGTCTGCCTCAT 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 90 bp | GATCCGAGTCTTGAACACTGCTGCAGACAGGTTCTGCTTGGCTTCTaGAGGCTTTCCCCTCTGCAGCTCCTGCCGCCAGTCACGGATGTG | + |
|
Preference number: 5 (lower is better) Translates to: DPSLEHCCRQVLLGF*RLSPLQLLPPVTDV Trigger: CACATCCGTGACTGGCGGCAGGAGCTGCAGAGGGGAAAGCCTCCAGAAGCCAAGCAGAACCTGTCTGCAGCAGTGTTCAAGACTCGGATC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 90 bp | GCAAAGGGGCATTGGGCAGCAGGCAGTACGCAGCCATCAGGATGGTaGGCGAAGAACCAGCAGATCCGAGTCTTGAACACTGCTGCAGAC | + |
|
Preference number: 5 (lower is better) Translates to: AKGHWAAGSTQPSGW*AKNQQIRVLNTAAD Trigger: GTCTGCAGCAGTGTTCAAGACTCGGATCTGCTGGTTCTTCGCCCACCATCCTGATGGCTGCGTACTGCCTGCTGCCCAATGCCCCTTTGC 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 90 bp | TGGGCAAAGGGGCATTGGGCAGCAGGCAGTACGCAGCCATCAGGATaGTGGGCGAAGAACCAGCAGATCCGAGTCTTGAACACTGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: WAKGHWAAGSTQPSG*WAKNQQIRVLNTAA Trigger: TGCAGCAGTGTTCAAGACTCGGATCTGCTGGTTCTTCGCCCACCATCCTGATGGCTGCGTACTGCCTGCTGCCCAATGCCCCTTTGCCCA 59% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS GCA 90 bp | CGGCTCTGTGGATGGCCCTGTCTGCTGTGCAGGTATCGCGTTCTCTaGTCATCCATCCAGACCTCTGCAGAAGGCGGGTATGTTCTGGAT | + |
|
Preference number: 5 (lower is better) Translates to: RLCGWPCLLCRYRVL*SSIQTSAEGGYVLD Trigger: ATCCAGAACATACCCGCCTTCTGCAGAGGTCTGGATGGATGAGCAGAGAACGCGATACCTGCACAGCAGACAGGGCCATCCACAGAGCCG 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 90 bp | CAGACCCGCTTAGTAGAAGGAATCCTGAGGCAGTCCTCCTGCACGTaGAAGCCACAGGAGAGCCCCACCTCCAGCACAAAGTCCAGATAC | + |
|
Preference number: 5 (lower is better) Translates to: QTRLVEGILRQSSCT*KPQESPTSSTKSRY Trigger: GTATCTGGACTTTGTGCTGGAGGTGGGGCTCTCCTGTGGCTTCCACGTGCAGGAGGACTGCCTCAGGATTCCTTCTACTAAGCGGGTCTG 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CAA 90 bp | AACCAAATGGCCAAGGTGGCCATGCTCCAGTTCCTGAACAAGCGTGTTTGCAGGGCCCACCTGGCCAGCTaGGACAGCAGTTCTTCTCCG | + |
|
Preference number: 5 (lower is better) Translates to: NQMAKVAMLQFLNKRVCRAHLAS*DSSSSP Trigger: CGGAGAAGAACTGCTGTCCAAGCTGGCCAGGTGGGC...CCTGCAAACACGCTTGTTCAGGAACTGGAGCATGGCCACCTTGGCCATTTGGTT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS GCA 90 bp | TGCCACCTGCAAAACCACTTGGTCAACGAAGTCTCGAGGGAGGGCTaGACAATTCCTCACACGCTCGGCCTTTTCTCTAGGGCAGAACCC | + |
|
Preference number: 5 (lower is better) Translates to: CHLQNHLVNEVSREG*TIPHTLGLFSRAEP Trigger: GGGTTCTGCCCTAGAGAAAAGGCCGAGCGTGTGAGGAATTGTGCAGCCCTCCCTCGAGACTTCGTTGACCAAGTGGTTTTGCAGGTGGCA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS GCA 90 bp | AGGATGGTGGGCGAAGAACCAGCAGATCCGAGTCTTGAACACTGCTaGAGACAGGTTCTGCTTGGCTTCTGGAGGCTTTCCCCTCTGCAG | + |
|
Preference number: 5 (lower is better) Translates to: RMVGEEPADPSLEHC*RQVLLGFWRLSPLQ Trigger: CTGCAGAGGGGAAAGCCTCCAGAAGCCAAGCAGAACCTGTCTGCAGCAGTGTTCAAGACTCGGATCTGCTGGTTCTTCGCCCACCATCCT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CAA 90 bp | CTGTTCTCCACCGCCCACCTGGCCAGCTTGGACAGCAGTTCTTCTCCGAGCCAGCCCACTGGAGACATCTaGCACTACCAGTTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: LFSTAHLASLDSSSSPSQPTGDI*HYQFFL Trigger: AAGAAAGAACTGGTAGTGCAAGATGTCTCCAGTGGG...CTGGCTCGGAGAAGAACTGCTGTCCAAGCTGGCCAGGTGGGCGGTGGAGAACAG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128195.3 |
||
| CDS TCA 90 bp | CAATCAGCCAATCAACACCAGGGAACAGGGTCTCGTCACTCGGAGTaGTGGAGCCTTCCTCCAGCTGAGTTTGGGGTCCATACATGTCCC | + |
|
Preference number: 5 (lower is better) Translates to: QSANQHQGTGSRHSE*WSLPPAEFGVHTCP Trigger: GGGACATGTATGGACCCCAAACTCAGCTGGAGGAAGGCTCCATCACTCCGAGTGACGAGACCCTGTTCCCTGGTGTTGATTGGCTGATTG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS GCA 90 bp | ACATCTTGCACTACCAGTTCTTTCTTCGGCTCTGTGAGTGGGGAGTaGGGGCTCGCTTTCGGGATGACAGTCCTGAGAATCAGGTCGAGC | + |
|
Preference number: 5 (lower is better) Translates to: TSCTTSSFFGSVSGE*GLAFGMTVLRIRSS Trigger: GCTCGACCTGATTCTCAGGACTGTCATCCCGAAAGCGAGCCCGCACTCCCCACTCACAGAGCCGAAGAAAGAACTGGTAGTGCAAGATGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030980.12 ENSMUST00000128195.3 |
||
| CDS GCA 90 bp | TCTGCTGTGCAGGTATCGCGTTCTCTGCTCATCCATCCAGACCTCTaGAGAAGGCGGGTATGTTCTGGATTTCCCAATGAGGCAGACCCG | + |
|
Preference number: 5 (lower is better) Translates to: SAVQVSRSLLIHPDL*RRRVCSGFPNEADP Trigger: CGGGTCTGCCTCATTGGGAAATCCAGAACATACCCGCCTTCTGCAGAGGTCTGGATGGATGAGCAGAGAACGCGATACCTGCACAGCAGA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS GCA 90 bp | TTCTTGAGAAGGGTCTGTAGGCCTCCACACTCCCGCTTCAGCCGCTaGAGCGTCTCTGAGTTTAGTTCTGCAGCCACTTCTGCCAAGGAA | + |
|
Preference number: 5 (lower is better) Translates to: FLRRVCRPPHSRFSR*SVSEFSSAATSAKE Trigger: TTCCTTGGCAGAAGTGGCTGCAGAACTAAACTCAGAGACGCTGCAGCGGCTGAAGCGGGAGTGTGGAGGCCTACAGACCCTTCTCAAGAA 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 90 bp | CGGATATCAATCCCTCTACCTGGGTGCCCCTCGTTGCTCAAGATGTaGACCAGAAGGCCATTTCCACACCCCAAGTCCACGAAAGACTGC | + |
|
Preference number: 5 (lower is better) Translates to: RISIPLPGCPSLLKM*TRRPFPHPKSTKDC Trigger: GCAGTCTTTCGTGGACTTGGGGTGTGGAAATGGCCTTCTGGTCCACATCTTGAGCAACGAGGGGCACCCAGGTAGAGGGATTGATATCCG 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CAA 90 bp | ACAAGCGTGTTTGCAGGTCGAGCAAGCCTGGGATGGTGCTCAGCAGTCAGCCATTTCCTCCAGCTGAGTTaGGGGTCCATACATGTCCCA | + |
|
Preference number: 5 (lower is better) Translates to: TSVFAGRASLGWCSAVSHFLQLS*GSIHVP Trigger: TGGGACATGTATGGACCCCAAACTCAGCTGGAGGAA...ATGGCTGACTGCTGAGCACCATCCCAGGCTTGCTCGACCTGCAAACACGCTTGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS GCA 90 bp | ATGTGGACCAGAAGGCCATTTCCACACCCCAAGTCCACGAAAGACTaGTTGGTGGTGACTCCCTTCTCAGCCCTTTCCTCTTCCCATAGG | + |
|
Preference number: 5 (lower is better) Translates to: MWTRRPFPHPKSTKD*LVVTPFSALSSSHR Trigger: CCTATGGGAAGAGGAAAGGGCTGAGAAGGGAGTCACCACCAAGCAGTCTTTCGTGGACTTGGGGTGTGGAAATGGCCTTCTGGTCCACAT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 90 bp | GACCTGGCTGCAATGACAGGGATCCAGGGGGTGAGCTCATCAGAATaGTTACCAATCAGCCAATCAACACCAGGGAACAGGGTCTCGTCA | + |
|
Preference number: 5 (lower is better) Translates to: DLAAMTGIQGVSSSE*LPISQSTPGNRVSS Trigger: TGACGAGACCCTGTTCCCTGGTGTTGATTGGCTGATTGGTAACCATTCTGATGAGCTCACCCCCTGGATCCCTGTCATTGCAGCCAGGTC 54% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS-3UTR CAA 90 bp | GCCCCTATGGACATGGGAGAAAAGGCAATTATAGGCATAGTCCATCCGAGACTGATGGGCAAAGGGGCATaGGGCAGCAGGCAGTACGCA | + |
|
Preference number: 5 (lower is better) Translates to: APMDMGEKAIIGIVHPRLMGKGA*GSRQYA Trigger: TGCGTACTGCCTGCTGCCCAATGCCCCTTTGCCCAT...CAGTCTCGGATGGACTATGCCTATAATTGCCTTTTCTCCCATGTCCATAGGGGC 54% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS TCA 90 bp | TGTGAACGCGCCCATTCAGAACTTCAAACACTTGATGGCTATTCTTaGGAAGGGTCTGTAGGCCTCCACACTCCCGCTTCAGCCGCTGCA | + |
|
Preference number: 5 (lower is better) Translates to: CERAHSELQTLDGYS*EGSVGLHTPASAAA Trigger: TGCAGCGGCTGAAGCGGGAGTGTGGAGGCCTACAGACCCTTCTCAAGAATAGCCATCAAGTGTTTGAAGTTCTGAATGGGCGCGTTCACA 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS GCA 90 bp | TCTTCTTCCAAGGGCAAAAAGGTGACACTCCCACTGGAGACATCTTaGACTACCAGTTCTTTCTTCGGCTCTGTGAGTGGGGAGTGCGGG | + |
|
Preference number: 5 (lower is better) Translates to: SSSKGKKVTLPLETS*TTSSFFGSVSGECG Trigger: CCCGCACTCCCCACTCACAGAGCCGAAGAAAGAACTGGTAGTGCAAGATGTCTCCAGTGGGAGTGTCACCTTTTTGCCCTTGGAAGAAGA 53% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030980.12 ENSMUST00000128195.3 |
||
| CDS-3UTR CAA 90 bp | GAAAAACTGTCCAATAGCCCTGGGGAGAAGGTTCTAAAGAGAAGGATCAGGTGGCCTGGGTGCCCCTCGTaGCTCAAGATGTGGACCAGA | + |
|
Preference number: 5 (lower is better) Translates to: EKLSNSPGEKVLKRRIRWPGCPS*LKMWTR Trigger: TCTGGTCCACATCTTGAGCAACGAGGGGCACCCAGG...CCACCTGATCCTTCTCTTTAGAACCTTCTCCCCAGGGCTATTGGACAGTTTTTC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CAA 90 bp | GGAGCAAGCTGTAGTTCTCAGCAGCTGGGCCTGAGACCCATGCTGGCCACCCTGTATCTAACAACAAGTTaGCCACCTGCAAAACCACTT | + |
|
Preference number: 5 (lower is better) Translates to: GASCSSQQLGLRPMLATLYLTTS*PPAKPL Trigger: AAGTGGTTTTGCAGGTGGCAAACTTGTTGTTAGATA...CAGGGTGGCCAGCATGGGTCTCAGGCCCAGCTGCTGAGAACTACAGCTTGCTCC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CAA 90 bp | GCCCCTATGGACATGGGAGAAAAGGCAATTATAGGCATAGTCCATCCGAGACTGGCAGACAGGTTCTGCTaGGCTTCTGGAGGCTTTCCC | + |
|
Preference number: 5 (lower is better) Translates to: APMDMGEKAIIGIVHPRLADRFC*ASGGFP Trigger: GGGAAAGCCTCCAGAAGCCAAGCAGAACCTGTCTGC...CAGTCTCGGATGGACTATGCCTATAATTGCCTTTTCTCCCATGTCCATAGGGGC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS TCA 90 bp | GGGAACAGGGTCTCGTCACTCGGAGTGATGGAGCCTTCCTCCAGCTaGGTTTGGGGTCCATACATGTCCCAGATTTTTCTTCTTCGGATA | + |
|
Preference number: 5 (lower is better) Translates to: GNRVSSLGVMEPSSS*VWGPYMSQIFLLRI Trigger: TATCCGAAGAAGAAAAATCTGGGACATGTATGGACCCCAAACTCAGCTGGAGGAAGGCTCCATCACTCCGAGTGACGAGACCCTGTTCCC 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CAA 90 bp | AAAAGAAACCACCACCCAAAGCAGGGAAGCTGCCAGGGCCCTTACCTTGTAAGTCACCTGCAAAACCACTaGGTCAACGAAGTCTCGAGG | + |
|
Preference number: 5 (lower is better) Translates to: KRNHHPKQGSCQGPYLVSHLQNH*VNEVSR Trigger: CCTCGAGACTTCGTTGACCAAGTGGTTTTGCAGGTG...ACTTACAAGGTAAGGGCCCTGGCAGCTTCCCTGCTTTGGGTGGTGGTTTCTTTT 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS-3UTR CAA 90 bp | TGTAGGACTCTGATAATGACTTCAGAAAGCCCTGTGCCTCTGCTTGCAGCGATCTCCACGAAAGACTGCTaGGTGGTGACTCCCTTCTCA | + |
|
Preference number: 5 (lower is better) Translates to: CRTLIMTSESPVPLLAAISTKDC*VVTPFS Trigger: TGAGAAGGGAGTCACCACCAAGCAGTCTTTCGTGGA...GATCGCTGCAAGCAGAGGCACAGGGCTTTCTGAAGTCATTATCAGAGTCCTACA 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS-3UTR CAA 90 bp | TGTAGGACTCTGATAATGACTTCAGAAAGCCCTGTGCCTCTGCTTGCAGCGATCCCCACTGGAGACATCTaGCACTACCAGTTCTTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: CRTLIMTSESPVPLLAAIPTGDI*HYQFFL Trigger: AAGAAAGAACTGGTAGTGCAAGATGTCTCCAGTGGG...GATCGCTGCAAGCAGAGGCACAGGGCTTTCTGAAGTCATTATCAGAGTCCTACA 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS CCA 90 bp | AACTTCTTTCTATCTAACAACAAGTTTGCCACCTGCAAAACCACTTaGTCAACGAAGTCTCGAGGGAGGGCTGCACAATTCCTCACACGC | + |
|
Preference number: 5 (lower is better) Translates to: NFFLSNNKFATCKTT*STKSRGRAAQFLTR Trigger: GCGTGTGAGGAATTGTGCAGCCCTCCCTCGAGACTTCGTTGACCAAGTGGTTTTGCAGGTGGCAAACTTGTTGTTAGATAGAAAGAAGTT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS-3UTR CAA 90 bp | GAAGTACTTCTACCCCGTGGGGTTTCAAAGACTGATCCCAGGACATTTAGCTCATCTCTGTATTTCTCTTaGAGCTCCTGGTACATCCTG | + |
|
Preference number: 5 (lower is better) Translates to: EVLLPRGVSKTDPRTFSSSLYFS*SSWYIL Trigger: CAGGATGTACCAGGAGCTCAAAGAGAAATACAGAGA...TGAGCTAAATGTCCTGGGATCAGTCTTTGAAACCCCACGGGGTAGAAGTACTTC 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS-3UTR CAA 90 bp | AACCAAATGGCCAAGGTGGCCATGCTCCAGTTCCTGAACAAGCGTGTTTGCAGGTCAGAGTTTCCTGTGTaGAACTTCTTTCTATCTAAC | + |
|
Preference number: 5 (lower is better) Translates to: NQMAKVAMLQFLNKRVCRSEFPV*NFFLSN Trigger: GTTAGATAGAAAGAAGTTCAACACAGGAAACTCTGA...CCTGCAAACACGCTTGTTCAGGAACTGGAGCATGGCCACCTTGGCCATTTGGTT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS TCA 90 bp | CACCATCTGAATGCCATCTCTCTGGACAGAAAATTAAAACAGATATaGACCATTCTCCTTCGTTGTGATGGAGATGGAGTTGATACACGT | + |
|
Preference number: 5 (lower is better) Translates to: HHLNAISLDRKLKQI*TILLRCDGDGVDTR Trigger: ACGTGTATCAACTCCATCTCCATCACAACGAAGGAGAATGGTTCATATCTGTTTTAATTTTCTGTCCAGAGAGATGGCATTCAGATGGTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS CCA 72 bp | CATGCGGGCGCCGCACAGCCTCTTGTTGGCCACCTGTaGCCTCTCCAGCCACACGGTCACGGCGGCCCAGAA | + |
|
Preference number: 6 (lower is better) Translates to: HAGAAQPLVGHL*PLQPHGHGGPE Trigger: TTCTGGGCCGCCGTGACCGTGTGGCTGGAGAGGCCACAGGTGGCCAACAAGAGGCTGTGCGGCGCCCGCATG 69% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS TCA 72 bp | CTGAGAATCAGGTCGAGCTCCTGCGCGGCTTCAGGCTaGGGACCCAACGAGGGGCCACAGAGGAAGGCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: LRIRSSSCAASG*GPNEGPQRKAS Trigger: GCTGGCCTTCCTCTGTGGCCCCTCGTTGGGTCCTCAGCCTGAAGCCGCGCAGGAGCTCGACCTGATTCTCAG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS GCA 72 bp | ACCAGCGTCATGAGCAGCAGTCTGCGGTGCAGAAGGTaGATGTGCCCCTCCAGGCCGGCTCTGTGGATGGCC | + |
|
Preference number: 6 (lower is better) Translates to: TSVMSSSLRCRR*MCPSRPALWMA Trigger: GGCCATCCACAGAGCCGGCCTGGAGGGGCACATGCACCTTCTGCACCGCAGACTGCTGCTCATGACGCTGGT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS GCA 72 bp | GTCCTGGAGACCAGCGTCATGAGCAGCAGTCTGCGGTaGAGAAGGTGCATGTGCCCCTCCAGGCCGGCTCTG | + |
|
Preference number: 6 (lower is better) Translates to: VLETSVMSSSLR*RRCMCPSRPAL Trigger: CAGAGCCGGCCTGGAGGGGCACATGCACCTTCTGCACCGCAGACTGCTGCTCATGACGCTGGTCTCCAGGAC 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS CCA 72 bp | AGGCGCAGCTCTTCGGGCCCATGGGCAAAGGGGCATTaGGCAGCAGGCAGTACGCAGCCATCAGGATGGTGG | + |
|
Preference number: 6 (lower is better) Translates to: RRSSSGPWAKGH*AAGSTQPSGWW Trigger: CCACCATCCTGATGGCTGCGTACTGCCTGCTGCCCAATGCCCCTTTGCCCATGGGCCCGAAGAGCTGCGCCT 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS CAA 72 bp | CAGGCGCAGCTCTTCGGGCCCATGGGCAAAGGGGCATaGGGCAGCAGGCAGTACGCAGCCATCAGGATGGTG | + |
|
Preference number: 6 (lower is better) Translates to: QAQLFGPMGKGA*GSRQYAAIRMV Trigger: CACCATCCTGATGGCTGCGTACTGCCTGCTGCCCAATGCCCCTTTGCCCATGGGCCCGAAGAGCTGCGCCTG 65% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS TCA 72 bp | CAGCCAGGCCCTCCAGCACGCACTCAGACCCAGCATTaGCGGTCCTGCAACTGTCCTGGAGACCAGCGTCAT | + |
|
Preference number: 6 (lower is better) Translates to: QPGPPARTQTQH*RSCNCPGDQRH Trigger: ATGACGCTGGTCTCCAGGACAGTTGCAGGACCGTCAATGCTGGGTCTGAGTGCGTGCTGGAGGGCCTGGCTG 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS CCA 72 bp | GGGCCACAGAGGAAGGCCAGCATTTCCGGATTGGCGTaGACGAGGCTTTGGGAGACTCGGTCCCATAGCGAG | + |
|
Preference number: 6 (lower is better) Translates to: GPQRKASISGLA*TRLWETRSHSE Trigger: CTCGCTATGGGACCGAGTCTCCCAAAGCCTCGTCCACGCCAATCCGGAAATGCTGGCCTTCCTCTGTGGCCC 62% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 72 bp | TGCAGAAGGTGCATGTGCCCCTCCAGGCCGGCTCTGTaGATGGCCCTGTCTGCTGTGCAGGTATCGCGTTCT | + |
|
Preference number: 6 (lower is better) Translates to: CRRCMCPSRPAL*MALSAVQVSRS Trigger: AGAACGCGATACCTGCACAGCAGACAGGGCCATCCACAGAGCCGGCCTGGAGGGGCACATGCACCTTCTGCA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 72 bp | TTCAAGGTCTGTGACAGGCGCAGCTCTTCGGGCCCATaGGCAAAGGGGCATTGGGCAGCAGGCAGTACGCAG | + |
|
Preference number: 6 (lower is better) Translates to: FKVCDRRSSSGP*AKGHWAAGSTQ Trigger: CTGCGTACTGCCTGCTGCCCAATGCCCCTTTGCCCATGGGCCCGAAGAGCTGCGCCTGTCACAGACCTTGAA 62% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS GCA 72 bp | ACCCGCTTAGTAGAAGGAATCCTGAGGCAGTCCTCCTaGACGTGGAAGCCACAGGAGAGCCCCACCTCCAGC | + |
|
Preference number: 6 (lower is better) Translates to: TRLVEGILRQSS*TWKPQESPTSS Trigger: GCTGGAGGTGGGGCTCTCCTGTGGCTTCCACGTGCAGGAGGACTGCCTCAGGATTCCTTCTACTAAGCGGGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 72 bp | ACGAGGGGCCACAGAGGAAGGCCAGCATTTCCGGATTaGCGTGGACGAGGCTTTGGGAGACTCGGTCCCATA | + |
|
Preference number: 6 (lower is better) Translates to: TRGHRGRPAFPD*RGRGFGRLGPI Trigger: TATGGGACCGAGTCTCCCAAAGCCTCGTCCACGCCAATCCGGAAATGCTGGCCTTCCTCTGTGGCCCCTCGT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CAA 72 bp | AACGAGGGGCCACAGAGGAAGGCCAGCATTTCCGGATaGGCGTGGACGAGGCTTTGGGAGACTCGGTCCCAT | + |
|
Preference number: 6 (lower is better) Translates to: NEGPQRKASISG*AWTRLWETRSH Trigger: ATGGGACCGAGTCTCCCAAAGCCTCGTCCACGCCAATCCGGAAATGCTGGCCTTCCTCTGTGGCCCCTCGTT 61% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 72 bp | GGGCATTGGGCAGCAGGCAGTACGCAGCCATCAGGATaGTGGGCGAAGAACCAGCAGATCCGAGTCTTGAAC | + |
|
Preference number: 6 (lower is better) Translates to: GHWAAGSTQPSG*WAKNQQIRVLN Trigger: GTTCAAGACTCGGATCTGCTGGTTCTTCGCCCACCATCCTGATGGCTGCGTACTGCCTGCTGCCCAATGCCC 60% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CAA 90 bp | AACCAGCAGATCCGAGTCTTGAACACTGCTGCAGACAGGTTCTGCTaGGCTTCTGGAGGCTTTCCCCTCTGCAGCTCCTGCCGCCAGTCA | + |
|
Preference number: 6 (lower is better) Translates to: NQQIRVLNTAADRFC*ASGGFPLCSSCRQS Trigger: TGACTGGCGGCAGGAGCTGCAGAGGGGAAAGCCTCCAGAAGCCAAGCAGAACCTGTCTGCAGCAGTGTTCAAGACTCGGATCTGCTGGTT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS GCA 72 bp | GGATGGCCCTGTCTGCTGTGCAGGTATCGCGTTCTCTaGTCATCCATCCAGACCTCTGCAGAAGGCGGGTAT | + |
|
Preference number: 6 (lower is better) Translates to: GWPCLLCRYRVL*SSIQTSAEGGY Trigger: ATACCCGCCTTCTGCAGAGGTCTGGATGGATGAGCAGAGAACGCGATACCTGCACAGCAGACAGGGCCATCC 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 72 bp | ATCCCTCTACCTGGGTGCCCCTCGTTGCTCAAGATGTaGACCAGAAGGCCATTTCCACACCCCAAGTCCACG | + |
|
Preference number: 6 (lower is better) Translates to: IPLPGCPSLLKM*TRRPFPHPKST Trigger: CGTGGACTTGGGGTGTGGAAATGGCCTTCTGGTCCACATCTTGAGCAACGAGGGGCACCCAGGTAGAGGGAT 58% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS GCA 72 bp | CAGATCCGAGTCTTGAACACTGCTGCAGACAGGTTCTaGTTGGCTTCTGGAGGCTTTCCCCTCTGCAGCTCC | + |
|
Preference number: 6 (lower is better) Translates to: QIRVLNTAADRF*LASGGFPLCSS Trigger: GGAGCTGCAGAGGGGAAAGCCTCCAGAAGCCAAGCAGAACCTGTCTGCAGCAGTGTTCAAGACTCGGATCTG 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 72 bp | TTAGTAGAAGGAATCCTGAGGCAGTCCTCCTGCACGTaGAAGCCACAGGAGAGCCCCACCTCCAGCACAAAG | + |
|
Preference number: 6 (lower is better) Translates to: LVEGILRQSSCT*KPQESPTSSTK Trigger: CTTTGTGCTGGAGGTGGGGCTCTCCTGTGGCTTCCACGTGCAGGAGGACTGCCTCAGGATTCCTTCTACTAA 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CCA 72 bp | CATTGGGCAGCAGGCAGTACGCAGCCATCAGGATGGTaGGCGAAGAACCAGCAGATCCGAGTCTTGAACACT | + |
|
Preference number: 6 (lower is better) Translates to: HWAAGSTQPSGW*AKNQQIRVLNT Trigger: AGTGTTCAAGACTCGGATCTGCTGGTTCTTCGCCCACCATCCTGATGGCTGCGTACTGCCTGCTGCCCAATG 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS CAA 72 bp | ATCCGAGTCTTGAACACTGCTGCAGACAGGTTCTGCTaGGCTTCTGGAGGCTTTCCCCTCTGCAGCTCCTGC | + |
|
Preference number: 6 (lower is better) Translates to: IRVLNTAADRFC*ASGGFPLCSSC Trigger: GCAGGAGCTGCAGAGGGGAAAGCCTCCAGAAGCCAAGCAGAACCTGTCTGCAGCAGTGTTCAAGACTCGGAT 57% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
||
| CDS TCA 72 bp | AATCAACACCAGGGAACAGGGTCTCGTCACTCGGAGTaGTGGAGCCTTCCTCCAGCTGAGTTTGGGGTCCAT | + |
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Preference number: 6 (lower is better) Translates to: NQHQGTGSRHSE*WSLPPAEFGVH Trigger: ATGGACCCCAAACTCAGCTGGAGGAAGGCTCCATCACTCCGAGTGACGAGACCCTGTTCCCTGGTGTTGATT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS TCA 72 bp | CAGGATGGTGGGCGAAGAACCAGCAGATCCGAGTCTTaGACACTGCTGCAGACAGGTTCTGCTTGGCTTCTG | + |
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Preference number: 6 (lower is better) Translates to: QDGGRRTSRSES*TLLQTGSAWLL Trigger: CAGAAGCCAAGCAGAACCTGTCTGCAGCAGTGTTCAAGACTCGGATCTGCTGGTTCTTCGCCCACCATCCTG 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS GCA 72 bp | ACTACCAGTTCTTTCTTCGGCTCTGTGAGTGGGGAGTaGGGGCTCGCTTTCGGGATGACAGTCCTGAGAATC | + |
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Preference number: 6 (lower is better) Translates to: TTSSFFGSVSGE*GLAFGMTVLRI Trigger: GATTCTCAGGACTGTCATCCCGAAAGCGAGCCCGCACTCCCCACTCACAGAGCCGAAGAAAGAACTGGTAGT 56% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000030980.12 ENSMUST00000128195.3 |
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| CDS GCA 72 bp | GCACAAAGTCCAGATACTCTCGGTACTGTGTCTTCCTaGTCTGCTGCCGCTGGTATCGCCCCACAAAGTCGA | + |
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Preference number: 6 (lower is better) Translates to: AQSPDTLGTVSS*SAAAGIAPQSR Trigger: TCGACTTTGTGGGGCGATACCAGCGGCAGCAGAGCAGGAAGACACAGTACCGAGAGTATCTGGACTTTGTGC 56% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS GCA 72 bp | GGCGAAGAACCAGCAGATCCGAGTCTTGAACACTGCTaGAGACAGGTTCTGCTTGGCTTCTGGAGGCTTTCC | + |
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Preference number: 6 (lower is better) Translates to: GEEPADPSLEHC*RQVLLGFWRLS Trigger: GGAAAGCCTCCAGAAGCCAAGCAGAACCTGTCTGCAGCAGTGTTCAAGACTCGGATCTGCTGGTTCTTCGCC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS GCA 72 bp | GTGGGCGAAGAACCAGCAGATCCGAGTCTTGAACACTaGTGCAGACAGGTTCTGCTTGGCTTCTGGAGGCTT | + |
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Preference number: 6 (lower is better) Translates to: VGEEPADPSLEH*CRQVLLGFWRL Trigger: AAGCCTCCAGAAGCCAAGCAGAACCTGTCTGCAGCAGTGTTCAAGACTCGGATCTGCTGGTTCTTCGCCCAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS CAA 90 bp | TGGACCAGAAGGCCATTTCCACACCCCAAGTCCACGAAAGACTGCTaGGTGGTGACTCCCTTCTCAGCCCTTTCCTCTTCCCATAGGATC | + |
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Preference number: 6 (lower is better) Translates to: WTRRPFPHPKSTKDC*VVTPFSALSSSHRI Trigger: GATCCTATGGGAAGAGGAAAGGGCTGAGAAGGGAGTCACCACCAAGCAGTCTTTCGTGGACTTGGGGTGTGGAAATGGCCTTCTGGTCCA 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS GCA 72 bp | AGAAGGCCATTTCCACACCCCAAGTCCACGAAAGACTaGTTGGTGGTGACTCCCTTCTCAGCCCTTTCCTCT | + |
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Preference number: 6 (lower is better) Translates to: RRPFPHPKSTKD*LVVTPFSALSS Trigger: AGAGGAAAGGGCTGAGAAGGGAGTCACCACCAAGCAGTCTTTCGTGGACTTGGGGTGTGGAAATGGCCTTCT 54% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS GCA 72 bp | CAAAACCACTTGGTCAACGAAGTCTCGAGGGAGGGCTaGACAATTCCTCACACGCTCGGCCTTTTCTCTAGG | + |
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Preference number: 6 (lower is better) Translates to: QNHLVNEVSREG*TIPHTLGLFSR Trigger: CCTAGAGAAAAGGCCGAGCGTGTGAGGAATTGTGCAGCCCTCCCTCGAGACTTCGTTGACCAAGTGGTTTTG 54% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS CAA 72 bp | TCAGGATGGTGGGCGAAGAACCAGCAGATCCGAGTCTaGAACACTGCTGCAGACAGGTTCTGCTTGGCTTCT | + |
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Preference number: 6 (lower is better) Translates to: SGWWAKNQQIRV*NTAADRFCLAS Trigger: AGAAGCCAAGCAGAACCTGTCTGCAGCAGTGTTCAAGACTCGGATCTGCTGGTTCTTCGCCCACCATCCTGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS GCA 72 bp | CAGGTATCGCGTTCTCTGCTCATCCATCCAGACCTCTaGAGAAGGCGGGTATGTTCTGGATTTCCCAATGAG | + |
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Preference number: 6 (lower is better) Translates to: QVSRSLLIHPDL*RRRVCSGFPNE Trigger: CTCATTGGGAAATCCAGAACATACCCGCCTTCTGCAGAGGTCTGGATGGATGAGCAGAGAACGCGATACCTG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS CCA 72 bp | GCAATGACAGGGATCCAGGGGGTGAGCTCATCAGAATaGTTACCAATCAGCCAATCAACACCAGGGAACAGG | + |
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Preference number: 6 (lower is better) Translates to: AMTGIQGVSSSE*LPISQSTPGNR Trigger: CCTGTTCCCTGGTGTTGATTGGCTGATTGGTAACCATTCTGATGAGCTCACCCCCTGGATCCCTGTCATTGC 53% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS CAA 90 bp | ATCTTCTTCCAAGGGCAAAAAGGTGACACTCCCACTGGAGACATCTaGCACTACCAGTTCTTTCTTCGGCTCTGTGAGTGGGGAGTGCGG | + |
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Preference number: 6 (lower is better) Translates to: IFFQGQKGDTPTGDI*HYQFFLRLCEWGVR Trigger: CCGCACTCCCCACTCACAGAGCCGAAGAAAGAACTGGTAGTGCAAGATGTCTCCAGTGGGAGTGTCACCTTTTTGCCCTTGGAAGAAGAT 52% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000030980.12 ENSMUST00000128195.3 |
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| CDS GCA 72 bp | AAGGGCAAAAAGGTGACACTCCCACTGGAGACATCTTaGACTACCAGTTCTTTCTTCGGCTCTGTGAGTGGG | + |
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Preference number: 6 (lower is better) Translates to: KGKKVTLPLETS*TTSSFFGSVSG Trigger: CCCACTCACAGAGCCGAAGAAAGAACTGGTAGTGCAAGATGTCTCCAGTGGGAGTGTCACCTTTTTGCCCTT 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030980.12 ENSMUST00000128195.3 |
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| CDS CAA 72 bp | CAAGGGCAAAAAGGTGACACTCCCACTGGAGACATCTaGCACTACCAGTTCTTTCTTCGGCTCTGTGAGTGG | + |
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Preference number: 6 (lower is better) Translates to: QGQKGDTPTGDI*HYQFFLRLCEW Trigger: CCACTCACAGAGCCGAAGAAAGAACTGGTAGTGCAAGATGTCTCCAGTGGGAGTGTCACCTTTTTGCCCTTG 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 2 transcripts: ENSMUST00000030980.12 ENSMUST00000128195.3 |
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| CDS TCA 72 bp | GCCCATTCAGAACTTCAAACACTTGATGGCTATTCTTaGGAAGGGTCTGTAGGCCTCCACACTCCCGCTTCA | + |
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Preference number: 6 (lower is better) Translates to: AHSELQTLDGYS*EGSVGLHTPAS Trigger: TGAAGCGGGAGTGTGGAGGCCTACAGACCCTTCTCAAGAATAGCCATCAAGTGTTTGAAGTTCTGAATGGGC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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| CDS CCA 72 bp | CTATCTAACAACAAGTTTGCCACCTGCAAAACCACTTaGTCAACGAAGTCTCGAGGGAGGGCTGCACAATTC | + |
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Preference number: 6 (lower is better) Translates to: LSNNKFATCKTT*STKSRGRAAQF Trigger: GAATTGTGCAGCCCTCCCTCGAGACTTCGTTGACCAAGTGGTTTTGCAGGTGGCAAACTTGTTGTTAGATAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000030980.12 |
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