Pregenerated sensors for TRMT2B (Mus musculus)
Ensembl gene IDs: ENSMUSG00000067369Ensembl transcript IDs: ENSMUST00000087540.4, ENSMUST00000087541.12, ENSMUST00000113252.8, ENSMUST00000128115.8
Found 175 sensor candidate(s). Results are sorted by "preference number" (better first), and then by GC (higher first).
| Type | Sensor | Details |
|---|---|---|
| 3UTR GCA 90 bp | TCCTATGGCAACCTGGGTGTCTCGGAAACTTCAGCCTTATCAGCCTaGAGCGTCCAGGTCTTACCGAGTGAAGAGGAGAACCAGCTCACA | + |
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Preference number: 1 (lower is better) Translates to: SYGNLGVSETSALSA*SVQVLPSEEENQLT Trigger: TGTGAGCTGGTTCTCCTCTTCACTCGGTAAGACCTGGACGCTGCAGGCTGATAAGGCTGAAGTTTCCGAGACACCCAGGTTGCCATAGGA 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR TCA 90 bp | TCAGTTAGTAAACGGGTTTCCCTCACACGCATCTTTCCCTGGCTTTaGTCCCCATCACTGCATAAAGCCATGTGTGGTGGCACATGCCTG | + |
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Preference number: 1 (lower is better) Translates to: SVSKRVSLTRIFPWL*SPSLHKAMCGGTCL Trigger: CAGGCATGTGCCACCACACATGGCTTTATGCAGTGATGGGGATCAAAGCCAGGGAAAGATGCGTGTGAGGGAAACCCGTTTACTAACTGA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR TCA 90 bp | GAAGCAGTCAGCCTTCTTTATGGTCACCGAGTGGTCCACGCTTGTTaGCACTGCTACGTGTACCTCTTCTTCCTTCTCCATCACTGTTTA | + |
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Preference number: 1 (lower is better) Translates to: EAVSLLYGHRVVHAC*HCYVYLFFLLHHCL Trigger: TAAACAGTGATGGAGAAGGAAGAAGAGGTACACGTAGCAGTGTCAACAAGCGTGGACCACTCGGTGACCATAAAGAAGGCTGACTGCTTC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
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| 3UTR TCA 90 bp | GCCAGTCAAATTCTTTTGGCCAGGATTCAAAATTGGTCTTTCTGGTaGTGCTTCCACTGTCTCCTATGGCAACCTGGGTGTCTCGGAAAC | + |
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Preference number: 1 (lower is better) Translates to: ASQILLARIQNWSFW*CFHCLLWQPGCLGN Trigger: GTTTCCGAGACACCCAGGTTGCCATAGGAGACAGTGGAAGCATCACCAGAAAGACCAATTTTGAATCCTGGCCAAAAGAATTTGACTGGC 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR GCA 90 bp | CCTAATTCAACAACAGAGGTCAGCTGCTTCTGTCCATTGGTTGGGTaGAAATATCTGCATCTGACTCTTTCAGCTGCTTGCTGGGTCTTC | + |
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Preference number: 1 (lower is better) Translates to: PNSTTEVSCFCPLVG*KYLHLTLSAACWVF Trigger: GAAGACCCAGCAAGCAGCTGAAAGAGTCAGATGCAGATATTTGCACCCAACCAATGGACAGAAGCAGCTGACCTCTGTTGTTGAATTAGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR GCA 90 bp | TCCACAGGTACAGCTTCTCTCAGGACGAATGGATCACCTAGGAGCTaGTTTGCAGAATTTGGAGGACAGCATAGTTCAATGAAGTTCCTT | + |
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Preference number: 1 (lower is better) Translates to: STGTASLRTNGSPRS*FAEFGGQHSSMKFL Trigger: AAGGAACTTCATTGAACTATGCTGTCCTCCAAATTCTGCAAAGCAGCTCCTAGGTGATCCATTCGTCCTGAGAGAAGCTGTACCTGTGGA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR GCA 90 bp | CCTGAGCTTCTTTCTGCCTTCCCTAATTCAACAACAGAGGTCAGCTaGTTCTGTCCATTGGTTGGGTGCAAATATCTGCATCTGACTCTT | + |
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Preference number: 1 (lower is better) Translates to: PELLSAFPNSTTEVS*FCPLVGCKYLHLTL Trigger: AAGAGTCAGATGCAGATATTTGCACCCAACCAATGGACAGAAGCAGCTGACCTCTGTTGTTGAATTAGGGAAGGCAGAAAGAAGCTCAGG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | GGTCTTCCAGAGGGCAGTCATGTTAGGTCCCTTTCTGTGGGCTCCATAGCCTCACATGCTGAGCAGCACTaGGGACTCCCAAAGAAGGGT | + |
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Preference number: 2 (lower is better) Translates to: GLPEGSHVRSLSVGSIASHAEQH*GLPKKG Trigger: ACCCTTCTTTGGGAGTCCTCAGTGCTGCTCAGCATG...TGAGGCTATGGAGCCCACAGAAAGGGACCTAACATGACTGCCCTCTGGAAGACC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | AGCCCTCAGGATCCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCAAGGTCCCAGTCAATATaGAATTACTGCCGGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: SPQDPTAYTSQHKNRQVPRSQSI*NYCRLL Trigger: GAGCAGCCGGCAGTAATTTCATATTGACTGGGACCT...TGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGGATCCTGAGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR CCA 90 bp | AGCCCTCAGGATCCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCATCTCCTATGGCAACCTaGGTGTCTCGGAAACTTCAG | + |
|
Preference number: 2 (lower is better) Translates to: SPQDPTAYTSQHKNRQVPSPMAT*VSRKLQ Trigger: CTGAAGTTTCCGAGACACCCAGGTTGCCATAGGAGA...TGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGGATCCTGAGGGCT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | CAGGATCCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCACTATGCAGGTCCCAGTCAATATaGAATTACTGCCGGCTGCTC | + |
|
Preference number: 2 (lower is better) Translates to: QDPTAYTSQHKNRQVPLCRSQSI*NYCRLL Trigger: GAGCAGCCGGCAGTAATTTCATATTGACTGGGACCT...GCATAGTGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGGATCCTG 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR CCA 90 bp | CCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCACTATGCCTTGTTTTCCACTGTCTCCTATaGCAACCTGGGTGTCTCGGA | + |
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Preference number: 2 (lower is better) Translates to: PTAYTSQHKNRQVPLCLVFHCLL*QPGCLG Trigger: TCCGAGACACCCAGGTTGCCATAGGAGACAGTGGAA...AACAAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGG 52% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR GCA 90 bp | CCAACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAAGTCAACCTCAGTTCAGCCTTATCAGCCTaGAGCGTCCAGGTCTTACCG | + |
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Preference number: 2 (lower is better) Translates to: PTLTKCRQKAYKFEVNLSSALSA*SVQVLP Trigger: CGGTAAGACCTGGACGCTGCAGGCTGATAAGGCTGA...ACTGAGGTTGACTTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR-3UTR GCA 90 bp | GATCCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCACTATGCCTTTTTGATCCCCATCACTaGATAAAGCCATGTGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: DPTAYTSQHKNRQVPLCLFDPHH*IKPCVV Trigger: CACCACACATGGCTTTATGCAGTGATGGGGATCAAA...AAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGGATC 49% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | ATGCCTGTAAGCCCAACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAAAGGTCCCAGTCAATATaGAATTACTGCCGGCTGCTC | + |
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Preference number: 2 (lower is better) Translates to: MPVSPTLTKCRQKAYKFERSQSI*NYCRLL Trigger: GAGCAGCCGGCAGTAATTTCATATTGACTGGGACCT...TTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGTTGGGCTTACAGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAGATCCAAATTCAGCTTCTTGTGTGTATGTGCGATAAGCACTTTACCCAGTTTCCAAACCTCATGCTaGGCAGCACTGAGGACTCCC | + |
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Preference number: 2 (lower is better) Translates to: ARSKFSFLCVCAISTLPSFQTSC*AALRTP Trigger: GGGAGTCCTCAGTGCTGCTCAGCATGAGGTTTGGAA...ACTGGGTAAAGTGCTTATCGCACATACACACAAGAAGCTGAATTTGGATCTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | CCAACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAAGTCAACCTCAGTACCCACTGCAGTCCCTaGTATTCCAAACCTCATGCT | + |
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Preference number: 2 (lower is better) Translates to: PTLTKCRQKAYKFEVNLSTHCSP*YSKPHA Trigger: AGCATGAGGTTTGGAATATCAGGGACTGCAGTGGGT...ACTGAGGTTGACTTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR-3UTR CCA 90 bp | CCAACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAAGTCAACCTCAGTTCTCCTATGGCAACCTaGGTGTCTCGGAAACTTCAG | + |
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Preference number: 2 (lower is better) Translates to: PTLTKCRQKAYKFEVNLSSPMAT*VSRKLQ Trigger: CTGAAGTTTCCGAGACACCCAGGTTGCCATAGGAGA...ACTGAGGTTGACTTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGTTGG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR CCA 90 bp | CTCAGCACAAGAACAGGCAGGTACCACTATGCCTTGTTATTATGTGCTAGATCCTCTCCTATGGCAACCTaGGTGTCTCGGAAACTTCAG | + |
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Preference number: 2 (lower is better) Translates to: LSTRTGRYHYALLLCARSSPMAT*VSRKLQ Trigger: CTGAAGTTTCCGAGACACCCAGGTTGCCATAGGAGA...GGATCTAGCACATAATAACAAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR CCA 90 bp | ACAACAGAGGTCAGCTGCTTCTGTCCATTGGTTGGGTGCAAATATCTGCATCTGACAAACACTAGAGTGTaGATGGTCCTGCAGTTCCGA | + |
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Preference number: 2 (lower is better) Translates to: TTEVSCFCPLVGCKYLHLTNTRV*MVLQFR Trigger: TCGGAACTGCAGGACCATCCACACTCTAGTGTTTGT...CAGATGCAGATATTTGCACCCAACCAATGGACAGAAGCAGCTGACCTCTGTTGT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR-3UTR CCA 90 bp | ATGCCTGTAAGCCCAACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAATCACAGTGTGGGGTGTaGGGAAACAAATCCACAGGT | + |
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Preference number: 2 (lower is better) Translates to: MPVSPTLTKCRQKAYKFESQCGV*GNKSTG Trigger: ACCTGTGGATTTGTTTCCCCACACCCCACACTGTGA...TTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGTTGGGCTTACAGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | GGACGAATGGATCACCTAGGAGCTGCTTTGCAGAATTTGGAGGACAGCATAGTTAATTGGTCTTTCTGGTaGTGCTTCCACTGTCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: GRMDHLGAALQNLEDSIVNWSFW*CFHCLL Trigger: TAGGAGACAGTGGAAGCATCACCAGAAAGACCAATT...AACTATGCTGTCCTCCAAATTCTGCAAAGCAGCTCCTAGGTGATCCATTCGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR-3UTR CCA 90 bp | GCATCTGACTCTTTCAGCTGCTTGCTGGGTCTTCCAGAGGGCAGTCATGTTAGGGAAGGAATAAGCACCTaGTTAATATACTTAACCCAC | + |
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Preference number: 2 (lower is better) Translates to: ASDSFSCLLGLPEGSHVREGIST*LIYLTH Trigger: GTGGGTTAAGTATATTAACCAGGTGCTTATTCCTTC...CCTAACATGACTGCCCTCTGGAAGACCCAGCAAGCAGCTGAAAGAGTCAGATGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | CCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCACTATGCCTTGTTGACAAGACTGTAGATTaGATGATGTATAGACAGCAA | + |
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Preference number: 2 (lower is better) Translates to: PTAYTSQHKNRQVPLCLVDKTVD*MMYRQQ Trigger: TTGCTGTCTATACATCATTCAATCTACAGTCTTGTC...AACAAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGCACAAGAACAGGCAGGTACCACTATGCCTTGTTATTATGTGCTAGATCCTTTGATCCCCATCACTaGATAAAGCCATGTGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: LSTRTGRYHYALLLCARSFDPHH*IKPCVV Trigger: CACCACACATGGCTTTATGCAGTGATGGGGATCAAA...GGATCTAGCACATAATAACAAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR GCA 90 bp | CCAACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAAGTCAACCTCAGTTTTGATCCCCATCACTaGATAAAGCCATGTGTGGTG | + |
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Preference number: 2 (lower is better) Translates to: PTLTKCRQKAYKFEVNLSFDPHH*IKPCVV Trigger: CACCACACATGGCTTTATGCAGTGATGGGGATCAAA...ACTGAGGTTGACTTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGTTGG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR CCA 90 bp | AGGTACCACTATGCCTTGTTATTATGTGCTAGATCCAAATTCAGCTTCTTGTGTTTCCACTGTCTCCTATaGCAACCTGGGTGTCTCGGA | + |
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Preference number: 2 (lower is better) Translates to: RYHYALLLCARSKFSFLCFHCLL*QPGCLG Trigger: TCCGAGACACCCAGGTTGCCATAGGAGACAGTGGAA...ACACAAGAAGCTGAATTTGGATCTAGCACATAATAACAAGGCATAGTGGTACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR CAA 90 bp | CTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCACTATGCCTaGTTATTATGTGCTAGATCCAAATTCAGCTTCTTGTGTGTATGT | + |
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Preference number: 2 (lower is better) Translates to: LHTRLSTRTGRYHYA*LLCARSKFSFLCVC Trigger: ACATACACACAAGAAGCTGAATTTGGATCTAGCACATAATAACAAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | CTCAGAGTAAATATACAGGTCCCAGTCAATATGAAATTACTGCCGGCTGCTCAACACCACTCTGTAATCTaGAGGAATAAGCACCTGGTT | + |
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Preference number: 2 (lower is better) Translates to: LRVNIQVPVNMKLLPAAQHHSVI*RNKHLV Trigger: AACCAGGTGCTTATTCCTTCAGATTACAGAGTGGTG...TTGAGCAGCCGGCAGTAATTTCATATTGACTGGGACCTGTATATTTACTCTGAG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR-3UTR GCA 90 bp | CTCAGAGTAAATATACAGGTCCCAGTCAATATGAAATTACTGCCGGCTGCTCAATTTCACCATGGGGCTTaGAGGAAACAAACACTAGAG | + |
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Preference number: 2 (lower is better) Translates to: LRVNIQVPVNMKLLPAAQFHHGA*RKQTLE Trigger: CTCTAGTGTTTGTTTCCTGCAAGCCCCATGGTGAAA...TTGAGCAGCCGGCAGTAATTTCATATTGACTGGGACCTGTATATTTACTCTGAG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | AGCAAAAGGATGGAGCAACACAAATTCAGGTTCAAGGAGTTAGGAGCAATCAAAAATTGGTCTTTCTGGTaGTGCTTCCACTGTCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: SKRMEQHKFRFKELGAIKNWSFW*CFHCLL Trigger: TAGGAGACAGTGGAAGCATCACCAGAAAGACCAATT...TTTGATTGCTCCTAACTCCTTGAACCTGAATTTGTGTTGCTCCATCCTTTTGCT 42% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAGTAAATATACAGGTCCCAGTCAATATGAAATTACTGCCGGCTGCTCAAAAAATTGGTCTTTCTGGTaGTGCTTCCACTGTCTCCTA | + |
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Preference number: 2 (lower is better) Translates to: QSKYTGPSQYEITAGCSKNWSFW*CFHCLL Trigger: TAGGAGACAGTGGAAGCATCACCAGAAAGACCAATT...TTTTGAGCAGCCGGCAGTAATTTCATATTGACTGGGACCTGTATATTTACTCTG 42% GC, longest homopolymer 6 nt, total homopolymer stretches 6 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | CTTCCTCCAGAATACACAGGACAATCTAAGTATTCAGTCCTTCCTTTCCGAGTTCTAGTGTGCACTATGTaGGACCTTGTTTCAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: LPPEYTGQSKYSVLPFRVLVCTM*DLVSKQ Trigger: TTGTTTTGAAACAAGGTCTCACATAGTGCACACTAG...AACTCGGAAAGGAAGGACTGAATACTTAGATTGTCCTGTGTATTCTGGAGGAAG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | GCTAGATCCAAATTCAGCTTCTTGTGTGTATGTGCGATAAGCACTTTACCCAGTCTAGTGTGCACTATGTaGGACCTTGTTTCAAAACAA | + |
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Preference number: 2 (lower is better) Translates to: ARSKFSFLCVCAISTLPSLVCTM*DLVSKQ Trigger: TTGTTTTGAAACAAGGTCTCACATAGTGCACACTAG...ACTGGGTAAAGTGCTTATCGCACATACACACAAGAAGCTGAATTTGGATCTAGC 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | AGGTACCACTATGCCTTGTTATTATGTGCTAGATCCAAATTCAGCTTCTTGTGTATCTTTCCCTGGCTTTaGTCCCCATCACTGCATAAA | + |
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Preference number: 2 (lower is better) Translates to: RYHYALLLCARSKFSFLCIFPWL*SPSLHK Trigger: TTTATGCAGTGATGGGGATCAAAGCCAGGGAAAGAT...ACACAAGAAGCTGAATTTGGATCTAGCACATAATAACAAGGCATAGTGGTACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAATACACAGGACAATCTAAGTATTCAGTCCTTCCTTTCCGAGTTTTTAACCAGCATTATATGCTTGTaGACACTGAGCCATCTCTCT | + |
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Preference number: 2 (lower is better) Translates to: QNTQDNLSIQSFLSEFLTSIICL*TLSHLS Trigger: AGAGAGATGGCTCAGTGTTCACAAGCATATAATGCT...GGTTAAAAACTCGGAAAGGAAGGACTGAATACTTAGATTGTCCTGTGTATTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | TCAAATTCTTTTGGCCAGGATTCAAAATTGGTCTTTCTGGTGATGCTTCCACTGGACAAGACTGTAGATTaGATGATGTATAGACAGCAA | + |
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Preference number: 2 (lower is better) Translates to: SNSFGQDSKLVFLVMLPLDKTVD*MMYRQQ Trigger: TTGCTGTCTATACATCATTCAATCTACAGTCTTGTC...CAGTGGAAGCATCACCAGAAAGACCAATTTTGAATCCTGGCCAAAAGAATTTGA 39% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR-3UTR TCA 90 bp | CAGAATACACAGGACAATCTAAGTATTCAGTCCTTCCTTTCCGAGTTTTTAACCTGTAGTATGTGTGTGTaGTTATACTTGTGGAGGACA | + |
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Preference number: 2 (lower is better) Translates to: QNTQDNLSIQSFLSEFLTCSMCV*LYLWRT Trigger: TGTCCTCCACAAGTATAATCACACACACATACTACA...GGTTAAAAACTCGGAAAGGAAGGACTGAATACTTAGATTGTCCTGTGTATTCTG 39% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| 3UTR GCA 72 bp | AACCTGGGTGTCTCGGAAACTTCAGCCTTATCAGCCTaGAGCGTCCAGGTCTTACCGAGTGAAGAGGAGAAC | + |
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Preference number: 3 (lower is better) Translates to: NLGVSETSALSA*SVQVLPSEEEN Trigger: GTTCTCCTCTTCACTCGGTAAGACCTGGACGCTGCAGGCTGATAAGGCTGAAGTTTCCGAGACACCCAGGTT 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR CCA 72 bp | GCGCTGAAGCAGTCAGCCTTCTTTATGGTCACCGAGTaGTCCACGCTTGTTGACACTGCTACGTGTACCTCT | + |
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Preference number: 3 (lower is better) Translates to: ALKQSAFFMVTE*STLVDTATCTS Trigger: AGAGGTACACGTAGCAGTGTCAACAAGCGTGGACCACTCGGTGACCATAAAGAAGGCTGACTGCTTCAGCGC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
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| 3UTR TCA 72 bp | ATTAACCCAGATCAACCTTGTGTGCCTGCGCTGCGCTaGAGCAGTCAGCCTTCTTTATGGTCACCGAGTGGT | + |
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Preference number: 3 (lower is better) Translates to: INPDQPCVPALR*SSQPSLWSPSG Trigger: ACCACTCGGTGACCATAAAGAAGGCTGACTGCTTCAGCGCAGCGCAGGCACACAAGGTTGATCTGGGTTAAT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
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| 3UTR-3UTR CAA 90 bp | GGTCTTCCAGAGGGCAGTCATGTTAGGTCCCTTTCTGTGGGCTCCATAGCCTCAGCTGCTTTGCAGAATTaGGAGGACAGCATAGTTCAA | + |
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Preference number: 3 (lower is better) Translates to: GLPEGSHVRSLSVGSIASAALQN*EDSIVQ Trigger: TTGAACTATGCTGTCCTCCAAATTCTGCAAAGCAGC...TGAGGCTATGGAGCCCACAGAAAGGGACCTAACATGACTGCCCTCTGGAAGACC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| 3UTR GCA 72 bp | CAGAAATTAACCCAGATCAACCTTGTGTGCCTGCGCTaGGCTGAAGCAGTCAGCCTTCTTTATGGTCACCGA | + |
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Preference number: 3 (lower is better) Translates to: QKLTQINLVCLR*AEAVSLLYGHR Trigger: TCGGTGACCATAAAGAAGGCTGACTGCTTCAGCGCAGCGCAGGCACACAAGGTTGATCTGGGTTAATTTCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
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| 3UTR-3UTR CAA 90 bp | AGCCCTCAGGATCCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCATCCAAATTCAGCTTCTaGTGTGTATGTGCGATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: SPQDPTAYTSQHKNRQVPSKFSF*CVCAIS Trigger: GCTTATCGCACATACACACAAGAAGCTGAATTTGGA...TGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGGATCCTGAGGGCT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| 3UTR-3UTR CAA 90 bp | GCTAGATCCAAATTCAGCTTCTTGTGTGTATGTGCGATAAGCACTTTACCCAGTCACCTAGGAGCTGCTTaGCAGAATTTGGAGGACAGC | + |
|
Preference number: 3 (lower is better) Translates to: ARSKFSFLCVCAISTLPSHLGAA*QNLEDS Trigger: GCTGTCCTCCAAATTCTGCAAAGCAGCTCCTAGGTG...ACTGGGTAAAGTGCTTATCGCACATACACACAAGAAGCTGAATTTGGATCTAGC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| 3UTR GCA 72 bp | ACAGCTTCTCTCAGGACGAATGGATCACCTAGGAGCTaGTTTGCAGAATTTGGAGGACAGCATAGTTCAATG | + |
|
Preference number: 3 (lower is better) Translates to: TASLRTNGSPRS*FAEFGGQHSSM Trigger: CATTGAACTATGCTGTCCTCCAAATTCTGCAAAGCAGCTCCTAGGTGATCCATTCGTCCTGAGAGAAGCTGT 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| 3UTR CCA 72 bp | TTCAACAACAGAGGTCAGCTGCTTCTGTCCATTGGTTaGGTGCAAATATCTGCATCTGACTCTTTCAGCTGC | + |
|
Preference number: 3 (lower is better) Translates to: FNNRGQLLLSIG*VQISASDSFSC Trigger: GCAGCTGAAAGAGTCAGATGCAGATATTTGCACCCAACCAATGGACAGAAGCAGCTGACCTCTGTTGTTGAA 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| 3UTR-3UTR CAA 90 bp | TGCTGTCTGTTTGGTGGTCCAGTGTTTGAAAGATTTCGGGGGTCCAGATTAATTAGCTGCTTCTGTCCATaGGTTGGGTGCAAATATCTG | + |
|
Preference number: 3 (lower is better) Translates to: CCLFGGPVFERFRGSRLISCFCP*VGCKYL Trigger: CAGATATTTGCACCCAACCAATGGACAGAAGCAGCT...AATTAATCTGGACCCCCGAAATCTTTCAAACACTGGACCACCAAACAGACAGCA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| 3UTR TCA 72 bp | ATTCTTTTGGCCAGGATTCAAAATTGGTCTTTCTGGTaGTGCTTCCACTGTCTCCTATGGCAACCTGGGTGT | + |
|
Preference number: 3 (lower is better) Translates to: ILLARIQNWSFW*CFHCLLWQPGC Trigger: ACACCCAGGTTGCCATAGGAGACAGTGGAAGCATCACCAGAAAGACCAATTTTGAATCCTGGCCAAAAGAAT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| 3UTR TCA 72 bp | AAAGCAGAATCCCATGGCGGGGACAAGACTGTAGATTaGATGATGTATAGACAGCAAAAGGATGGAGCAACA | + |
|
Preference number: 3 (lower is better) Translates to: KAESHGGDKTVD*MMYRQQKDGAT Trigger: TGTTGCTCCATCCTTTTGCTGTCTATACATCATTCAATCTACAGTCTTGTCCCCGCCATGGGATTCTGCTTT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| 3UTR GCA 72 bp | TATAATCATCAGAAATTAACCCAGATCAACCTTGTGTaGCTGCGCTGCGCTGAAGCAGTCAGCCTTCTTTAT | + |
|
Preference number: 3 (lower is better) Translates to: YNHQKLTQINLV*LRCAEAVSLLY Trigger: ATAAAGAAGGCTGACTGCTTCAGCGCAGCGCAGGCACACAAGGTTGATCTGGGTTAATTTCTGATGATTATA 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
||
| 3UTR GCA 72 bp | TGTATATGTATTGGGGGCCTCATATCAGCAGGTGTATaGTGTCTGTTTGGTGGTCCAGTGTTTGAAAGATTT | + |
|
Preference number: 3 (lower is better) Translates to: CICIGGLISAGV*CLFGGPVFERF Trigger: AAATCTTTCAAACACTGGACCACCAAACAGACAGCATACACCTGCTGATATGAGGCCCCCAATACATATACA 43% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAAATTCTTTTGGCCAGGATTCAAAATTGGTCTTTCTGGTGATGCTTCCACTGGGCCAGGATTCAAAATaGGTCTTTCTGGTGATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: SNSFGQDSKLVFLVMLPLGQDSK*VFLVML Trigger: AAGCATCACCAGAAAGACCAATTTTGAATCCTGGCC...CAGTGGAAGCATCACCAGAAAGACCAATTTTGAATCCTGGCCAAAAGAATTTGA 42% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| 3UTR-3UTR CAA 90 bp | CTCAGAGTAAATATACAGGTCCCAGTCAATATGAAATTACTGCCGGCTGCTCAAGCCAGTCAAATTCTTTaGGCCAGGATTCAAAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: LRVNIQVPVNMKLLPAAQASQIL*ARIQNW Trigger: CCAATTTTGAATCCTGGCCAAAAGAATTTGACTGGC...TTGAGCAGCCGGCAGTAATTTCATATTGACTGGGACCTGTATATTTACTCTGAG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAATACACAGGACAATCTAAGTATTCAGTCCTTCCTTTCCGAGTTTTTAACCGGCCAGGATTCAAAATaGGTCTTTCTGGTGATGCTT | + |
|
Preference number: 3 (lower is better) Translates to: QNTQDNLSIQSFLSEFLTGQDSK*VFLVML Trigger: AAGCATCACCAGAAAGACCAATTTTGAATCCTGGCC...GGTTAAAAACTCGGAAAGGAAGGACTGAATACTTAGATTGTCCTGTGTATTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| 3UTR-3UTR CAA 90 bp | TCAAATTCTTTTGGCCAGGATTCAAAATTGGTCTTTCTGGTGATGCTTCCACTGGCCAGTCAAATTCTTTaGGCCAGGATTCAAAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: SNSFGQDSKLVFLVMLPLASQIL*ARIQNW Trigger: CCAATTTTGAATCCTGGCCAAAAGAATTTGACTGGC...CAGTGGAAGCATCACCAGAAAGACCAATTTTGAATCCTGGCCAAAAGAATTTGA 41% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAATACACAGGACAATCTAAGTATTCAGTCCTTCCTTTCCGAGTTTTTAACCGCCAGTCAAATTCTTTaGGCCAGGATTCAAAATTGG | + |
|
Preference number: 3 (lower is better) Translates to: QNTQDNLSIQSFLSEFLTASQIL*ARIQNW Trigger: CCAATTTTGAATCCTGGCCAAAAGAATTTGACTGGC...GGTTAAAAACTCGGAAAGGAAGGACTGAATACTTAGATTGTCCTGTGTATTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| 3UTR-3UTR CAA 90 bp | CAGAATACACAGGACAATCTAAGTATTCAGTCCTTCCTTTCCGAGTTTTTAACCTCCAAATTCAGCTTCTaGTGTGTATGTGCGATAAGC | + |
|
Preference number: 3 (lower is better) Translates to: QNTQDNLSIQSFLSEFLTSKFSF*CVCAIS Trigger: GCTTATCGCACATACACACAAGAAGCTGAATTTGGA...GGTTAAAAACTCGGAAAGGAAGGACTGAATACTTAGATTGTCCTGTGTATTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| 3UTR TCA 72 bp | TCTCTAATGACTGATTCTCCTTCTACAGGTAAGAGATaGATGGCATTATTGTCCCTAGAGATAACCACATTT | + |
|
Preference number: 3 (lower is better) Translates to: SLMTDSPSTGKR*MALLSLEITTF Trigger: AAATGTGGTTATCTCTAGGGACAATAATGCCATTCATCTCTTACCTGTAGAAGGAGAATCAGTCATTAGAGA 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGCCTGCGCTGCGCTGAAGCAGTCAGCCTTCTTTATGGTCACCGAGTGGTCCCACAGTCTTTGGATTaGCATCTGGGCTCCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: VCLRCAEAVSLLYGHRVVPQSLD*HLGSCT Trigger: TGTACAGGAGCCCAGATGGCAATCCAAAGACTGTGG...GACCACTCGGTGACCATAAAGAAGGCTGACTGCTTCAGCGCAGCGCAGGCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
||
| CDS-3UTR GCA 90 bp | AGCCCTCAGGATCCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCAGACACCATTGAAGGCTaGAGTCCACCTGGCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SPQDPTAYTSQHKNRQVPDTIEG*SPPGIL Trigger: GAGGATGCCAGGTGGACTGCAGCCTTCAATGGTGTC...TGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGGATCCTGAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTTCCAGAGGGCAGTCATGTTAGGTCCCTTTCTGTGGGCTCCATAGCCTCATCAGCCAGCCTCTCCTaGCAGGAGTCATCTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: GLPEGSHVRSLSVGSIASSASLS*QESSLQ Trigger: TTGTAGAGATGACTCCTGGCAGGAGAGGCTGGCTGA...TGAGGCTATGGAGCCCACAGAAAGGGACCTAACATGACTGCCCTCTGGAAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | GGTCTTCCAGAGGGCAGTCATGTTAGGTCCCTTTCTGTGGGCTCCATAGCCTCAGCATCCTCTACTGCCTaGTCCACTAGCTCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: GLPEGSHVRSLSVGSIASASSTA*STSSMP Trigger: TGGCATTGAGCTAGTGGAGCAGGCAGTAGAGGATGC...TGAGGCTATGGAGCCCACAGAAAGGGACCTAACATGACTGCCCTCTGGAAGACC 54% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | GTGTGCCTGCGCTGCGCTGAAGCAGTCAGCCTTCTTTATGGTCACCGAGTGGTCTTTTGTCTGCTTGGGTaGTTCTTAGCTATCACGCTG | + |
|
Preference number: 4 (lower is better) Translates to: VCLRCAEAVSLLYGHRVVFCLLG*FLAITL Trigger: CAGCGTGATAGCTAAGAAGCACCCAAGCAGACAAAA...GACCACTCGGTGACCATAAAGAAGGCTGACTGCTTCAGCGCAGCGCAGGCACAC 53% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
||
| CDS-3UTR CCA 90 bp | ACCGAGTGGTCCACGCTTGTTGACACTGCTACGTGTACCTCTTCTTCCTTCTCCGTAGCCCACAGTCTTTaGATTGCCATCTGGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: TEWSTLVDTATCTSSSFSVAHSL*IAIWAP Trigger: AGGAGCCCAGATGGCAATCCAAAGACTGTGGGCTAC...GGAGAAGGAAGAAGAGGTACACGTAGCAGTGTCAACAAGCGTGGACCACTCGGT 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
||
| CDS-3UTR TCA 90 bp | GCATCTGACTCTTTCAGCTGCTTGCTGGGTCTTCCAGAGGGCAGTCATGTTAGGAAGGCAGGGTTCCACTaGAGACTGTCGAAGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: ASDSFSCLLGLPEGSHVRKAGFH*RLSKEY Trigger: GTATTCCTTCGACAGTCTTCAGTGGAACCCTGCCTT...CCTAACATGACTGCCCTCTGGAAGACCCAGCAAGCAGCTGAAAGAGTCAGATGC 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | TCACCGAGTGGTCCACGCTTGTTGACACTGCTACGTGTACCTCTTCTTCCTTCTTCAGCCAGCCTCTCCTaGCAGGAGTCATCTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: SPSGPRLLTLLRVPLLPSSASLS*QESSLQ Trigger: TTGTAGAGATGACTCCTGGCAGGAGAGGCTGGCTGA...AGAAGGAAGAAGAGGTACACGTAGCAGTGTCAACAAGCGTGGACCACTCGGTGA 52% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
||
| CDS-3UTR GCA 90 bp | AAGCCCTCAGGATCCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCGCCATTGTGTGTCCTTaGCTATTGGTACGAACTACG | + |
|
Preference number: 4 (lower is better) Translates to: KPSGSHCIHVSAQEQAGTAIVCP*LLVRTT Trigger: CGTAGTTCGTACCAATAGGCAAGGACACACAATGGC...GGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGGATCCTGAGGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | AAGCCCTCAGGATCCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCGGATCACCTAGGAGCTaGTTTGCAGAATTTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: KPSGSHCIHVSAQEQAGTGSPRS*FAEFGG Trigger: TCCTCCAAATTCTGCAAAGCAGCTCCTAGGTGATCC...GGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGGATCCTGAGGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 |
||
| CDS-3UTR TCA 90 bp | GTGTGCCTGCGCTGCGCTGAAGCAGTCAGCCTTCTTTATGGTCACCGAGTGGTCTGCCTTTGTTTCTTCTaGTATTTTTGTCTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: VCLRCAEAVSLLYGHRVVCLCFF*YFCLLG Trigger: CCCAAGCAGACAAAAATATCAGAAGAAACAAAGGCA...GACCACTCGGTGACCATAAAGAAGGCTGACTGCTTCAGCGCAGCGCAGGCACAC 51% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
||
| CDS-3UTR TCA 90 bp | GATCCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCACTATGCCTTAAGGCAGGGTTCCACTaGAGACTGTCGAAGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: DPTAYTSQHKNRQVPLCLKAGFH*RLSKEY Trigger: GTATTCCTTCGACAGTCTTCAGTGGAACCCTGCCTT...AAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGGATC 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | GGTCTTCCAGAGGGCAGTCATGTTAGGTCCCTTTCTGTGGGCTCCATAGCCTCACTTTGGATTGCCATCTaGGCTCCTGTACACAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: GLPEGSHVRSLSVGSIASLWIAI*APVHRK Trigger: TTTTCTGTGTACAGGAGCCCAGATGGCAATCCAAAG...TGAGGCTATGGAGCCCACAGAAAGGGACCTAACATGACTGCCCTCTGGAAGACC 51% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | CAGGATCCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCACTATGCACAAACACTAGAGTGTaGATGGTCCTGCAGTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: QDPTAYTSQHKNRQVPLCTNTRV*MVLQFR Trigger: TCGGAACTGCAGGACCATCCACACTCTAGTGTTTGT...GCATAGTGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGGATCCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 |
||
| 3UTR CAA 72 bp | CAGCCTTCTTTATGGTCACCGAGTGGTCCACGCTTGTaGACACTGCTACGTGTACCTCTTCTTCCTTCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QPSLWSPSGPRL*TLLRVPLLPSP Trigger: TGGAGAAGGAAGAAGAGGTACACGTAGCAGTGTCAACAAGCGTGGACCACTCGGTGACCATAAAGAAGGCTG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
||
| 3UTR CAA 72 bp | TTGGGGGCCTCATATCAGCAGGTGTATGCTGTCTGTTaGGTGGTCCAGTGTTTGAAAGATTTCGGGGGTCCA | + |
|
Preference number: 4 (lower is better) Translates to: LGASYQQVYAVC*VVQCLKDFGGP Trigger: TGGACCCCCGAAATCTTTCAAACACTGGACCACCAAACAGACAGCATACACCTGCTGATATGAGGCCCCCAA 51% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | GATCCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCACTATGCCTTGCCATTGTGTGTCCTTaGCTATTGGTACGAACTACG | + |
|
Preference number: 4 (lower is better) Translates to: DPTAYTSQHKNRQVPLCLAIVCP*LLVRTT Trigger: CGTAGTTCGTACCAATAGGCAAGGACACACAATGGC...AAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGGATC 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | CCAATCTGCCTCAGAGAAGGAGGCCAGTCAAATTCTTTTGGCCAGGATTCAAAAGGGACTGCTGATGGCTaGAACGGGTCATGGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: PICLREGGQSNSFGQDSKGTADG*NGSWCF Trigger: AAAGCACCATGACCCGTTGCAGCCATCAGCAGTCCC...TTTTGAATCCTGGCCAAAAGAATTTGACTGGCCTCCTTCTCTGAGGCAGATTGG 50% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| 3UTR CAA 72 bp | AGTCAGCCTTCTTTATGGTCACCGAGTGGTCCACGCTaGTTGACACTGCTACGTGTACCTCTTCTTCCTTCT | + |
|
Preference number: 4 (lower is better) Translates to: SQPSLWSPSGPR*LTLLRVPLLPS Trigger: AGAAGGAAGAAGAGGTACACGTAGCAGTGTCAACAAGCGTGGACCACTCGGTGACCATAAAGAAGGCTGACT 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
||
| CDS-3UTR TCA 90 bp | GCATCTGACTCTTTCAGCTGCTTGCTGGGTCTTCCAGAGGGCAGTCATGTTAGGCTTAATCCCTGGGGATaGAAAGTGACAATAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: ASDSFSCLLGLPEGSHVRLNPWG*KVTIAI Trigger: AATGGCTATTGTCACTTTTCATCCCCAGGGATTAAG...CCTAACATGACTGCCCTCTGGAAGACCCAGCAAGCAGCTGAAAGAGTCAGATGC 49% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | ATGCCTGTAAGCCCAACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAATCAGCCAGCCTCTCCTaGCAGGAGTCATCTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: MPVSPTLTKCRQKAYKFESASLS*QESSLQ Trigger: TTGTAGAGATGACTCCTGGCAGGAGAGGCTGGCTGA...TTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGTTGGGCTTACAGGCAT 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | GCATCTGACTCTTTCAGCTGCTTGCTGGGTCTTCCAGAGGGCAGTCATGTTAGGTTTCACCTTGAGTTGTaGTTCATAACTCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: ASDSFSCLLGLPEGSHVRFHLEL*FITQPP Trigger: TGGAGGCTGAGTTATGAAGCACAACTCAAGGTGAAA...CCTAACATGACTGCCCTCTGGAAGACCCAGCAAGCAGCTGAAAGAGTCAGATGC 49% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | ACACGTCTCAGCACAAGAACAGGCAGGTACCACTATGCCTTGTTATTATGTGCTGCATCCTCTACTGCCTaGTCCACTAGCTCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: TRLSTRTGRYHYALLLCAASSTA*STSSMP Trigger: TGGCATTGAGCTAGTGGAGCAGGCAGTAGAGGATGC...AGCACATAATAACAAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAGACGTGT 49% GC, longest homopolymer 2 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCCAGAATACACAGGACAATCTAAGTATTCAGTCCTTCCTTTCCGAGTTGAGGGTATAATGGGATaGAGGAGACAGCGGAGCCCC | + |
|
Preference number: 4 (lower is better) Translates to: LPPEYTGQSKYSVLPFRVEGIMG*RRQRSP Trigger: GGGGCTCCGCTGTCTCCTCCATCCCATTATACCCTC...AACTCGGAAAGGAAGGACTGAATACTTAGATTGTCCTGTGTATTCTGGAGGAAG 49% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | CAGCAGGTGTATGCTGTCTGTTTGGTGGTCCAGTGTTTGAAAGATTTCGGGGGTATAAAGACACAGAACTaGTGGCCACCATGGGAGAAG | + |
|
Preference number: 4 (lower is better) Translates to: QQVYAVCLVVQCLKDFGGIKTQN*WPPWEK Trigger: CTTCTCCCATGGTGGCCACCAGTTCTGTGTCTTTAT...ACCCCCGAAATCTTTCAAACACTGGACCACCAAACAGACAGCATACACCTGCTG 49% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS-3UTR TCA 90 bp | GCATCTGACTCTTTCAGCTGCTTGCTGGGTCTTCCAGAGGGCAGTCATGTTAGGTGCCTTTGTTTCTTCTaGTATTTTTGTCTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ASDSFSCLLGLPEGSHVRCLCFF*YFCLLG Trigger: CCCAAGCAGACAAAAATATCAGAAGAAACAAAGGCA...CCTAACATGACTGCCCTCTGGAAGACCCAGCAAGCAGCTGAAAGAGTCAGATGC 48% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCTGTAAGCCCAACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAACAGCCACTGTGTCACTaGCTCCATGGAGCACTTTTA | + |
|
Preference number: 4 (lower is better) Translates to: MPVSPTLTKCRQKAYKFEQPLCH*LHGALL Trigger: TAAAAGTGCTCCATGGAGTCAGTGACACAGTGGCTG...TTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGTTGGGCTTACAGGCAT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR TCA 90 bp | CCAATCTGCCTCAGAGAAGGAGGCCAGTCAAATTCTTTTGGCCAGGATTCAAAAAAGGCAGGGTTCCACTaGAGACTGTCGAAGGAATAC | + |
|
Preference number: 4 (lower is better) Translates to: PICLREGGQSNSFGQDSKKAGFH*RLSKEY Trigger: GTATTCCTTCGACAGTCTTCAGTGGAACCCTGCCTT...TTTTGAATCCTGGCCAAAAGAATTTGACTGGCCTCCTTCTCTGAGGCAGATTGG 48% GC, longest homopolymer 6 nt, total homopolymer stretches 10 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR TCA 90 bp | CCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCACTATGCCTTGTTCTTAATCCCTGGGGATaGAAAGTGACAATAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: PTAYTSQHKNRQVPLCLVLNPWG*KVTIAI Trigger: AATGGCTATTGTCACTTTTCATCCCCAGGGATTAAG...AACAAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR TCA 90 bp | ATGCCTGTAAGCCCAACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAATTCAAGGTCACCTTCTaGACACAGACCTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: MPVSPTLTKCRQKAYKFEFKVTF*TQTSSS Trigger: TGAGGAGGAGGTCTGTGTTCAGAAGGTGACCTTGAA...TTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGTTGGGCTTACAGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | ATGCCTGTAAGCCCAACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAACCACAGTCTTTGGATTaGCATCTGGGCTCCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: MPVSPTLTKCRQKAYKFEPQSLD*HLGSCT Trigger: TGTACAGGAGCCCAGATGGCAATCCAAAGACTGTGG...TTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGTTGGGCTTACAGGCAT 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | AATCTGCCTCAGAGAAGGAGGCCAGTCAAATTCTTTTGGCCAGGATTCAAAATTGACACCATTGAAGGCTaGAGTCCACCTGGCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: NLPQRRRPVKFFWPGFKIDTIEG*SPPGIL Trigger: GAGGATGCCAGGTGGACTGCAGCCTTCAATGGTGTC...AATTTTGAATCCTGGCCAAAAGAATTTGACTGGCCTCCTTCTCTGAGGCAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | AGTGGTCCACGCTTGTTGACACTGCTACGTGTACCTCTTCTTCCTTCTCCATCACTTTGGATTGCCATCTaGGCTCCTGTACACAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: SGPRLLTLLRVPLLPSPSLWIAI*APVHRK Trigger: TTTTCTGTGTACAGGAGCCCAGATGGCAATCCAAAG...TGATGGAGAAGGAAGAAGAGGTACACGTAGCAGTGTCAACAAGCGTGGACCACT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
||
| CDS-3UTR CCA 90 bp | CTCAGCACAAGAACAGGCAGGTACCACTATGCCTTGTTATTATGTGCTAGATCCTCACAGTGTGGGGTGTaGGGAAACAAATCCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: LSTRTGRYHYALLLCARSSQCGV*GNKSTG Trigger: ACCTGTGGATTTGTTTCCCCACACCCCACACTGTGA...GGATCTAGCACATAATAACAAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 |
||
| CDS-3UTR CCA 90 bp | CCAACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAAGTCAACCTCAGTTCACAGTGTGGGGTGTaGGGAAACAAATCCACAGGT | + |
|
Preference number: 4 (lower is better) Translates to: PTLTKCRQKAYKFEVNLSSQCGV*GNKSTG Trigger: ACCTGTGGATTTGTTTCCCCACACCCCACACTGTGA...ACTGAGGTTGACTTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGTTGG 48% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGTAAATATACAGGTCCCAGTCAATATGAAATTACTGCCGGCTGCTCAAGGAGAAGCCTACACATaGGGAACAGCCAAGGTGTCC | + |
|
Preference number: 4 (lower is better) Translates to: LRVNIQVPVNMKLLPAAQGEAYT*GTAKVS Trigger: GGACACCTTGGCTGTTCCCCATGTGTAGGCTTCTCC...TTGAGCAGCCGGCAGTAATTTCATATTGACTGGGACCTGTATATTTACTCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS-3UTR TCA 90 bp | CAGCAGGTGTATGCTGTCTGTTTGGTGGTCCAGTGTTTGAAAGATTTCGGGGGTGGGATGTTTTTCAGATaGTTACATGGTAGACAGACG | + |
|
Preference number: 4 (lower is better) Translates to: QQVYAVCLVVQCLKDFGGGMFFR*LHGRQT Trigger: CGTCTGTCTACCATGTAATCATCTGAAAAACATCCC...ACCCCCGAAATCTTTCAAACACTGGACCACCAAACAGACAGCATACACCTGCTG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | CCAATCTGCCTCAGAGAAGGAGGCCAGTCAAATTCTTTTGGCCAGGATTCAAAAGCCATTGTGTGTCCTTaGCTATTGGTACGAACTACG | + |
|
Preference number: 4 (lower is better) Translates to: PICLREGGQSNSFGQDSKAIVCP*LLVRTT Trigger: CGTAGTTCGTACCAATAGGCAAGGACACACAATGGC...TTTTGAATCCTGGCCAAAAGAATTTGACTGGCCTCCTTCTCTGAGGCAGATTGG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | TCAAATTCTTTTGGCCAGGATTCAAAATTGGTCTTTCTGGTGATGCTTCCACTGGGGACTGCTGATGGCTaGAACGGGTCATGGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: SNSFGQDSKLVFLVMLPLGTADG*NGSWCF Trigger: AAAGCACCATGACCCGTTGCAGCCATCAGCAGTCCC...CAGTGGAAGCATCACCAGAAAGACCAATTTTGAATCCTGGCCAAAAGAATTTGA 47% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGTAAATATACAGGTCCCAGTCAATATGAAATTACTGCCGGCTGCTCAAAAGGGACTGCTGATGGCTaGAACGGGTCATGGTGCTTT | + |
|
Preference number: 4 (lower is better) Translates to: QSKYTGPSQYEITAGCSKGTADG*NGSWCF Trigger: AAAGCACCATGACCCGTTGCAGCCATCAGCAGTCCC...TTTTGAGCAGCCGGCAGTAATTTCATATTGACTGGGACCTGTATATTTACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAAAGGATGGAGCAACACAAATTCAGGTTCAAGGAGTTAGGAGCAATCAAAGACACCATTGAAGGCTaGAGTCCACCTGGCATCCTC | + |
|
Preference number: 4 (lower is better) Translates to: SKRMEQHKFRFKELGAIKDTIEG*SPPGIL Trigger: GAGGATGCCAGGTGGACTGCAGCCTTCAATGGTGTC...TTTGATTGCTCCTAACTCCTTGAACCTGAATTTGTGTTGCTCCATCCTTTTGCT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGTAAATATACAGGTCCCAGTCAATATGAAATTACTGCCGGCTGCTCAAGTAGCCCACAGTCTTTaGATTGCCATCTGGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRVNIQVPVNMKLLPAAQVAHSL*IAIWAP Trigger: AGGAGCCCAGATGGCAATCCAAAGACTGTGGGCTAC...TTGAGCAGCCGGCAGTAATTTCATATTGACTGGGACCTGTATATTTACTCTGAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | AATCTGCCTCAGAGAAGGAGGCCAGTCAAATTCTTTTGGCCAGGATTCAAAATTGTAGCCCACAGTCTTTaGATTGCCATCTGGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: NLPQRRRPVKFFWPGFKIVAHSL*IAIWAP Trigger: AGGAGCCCAGATGGCAATCCAAAGACTGTGGGCTAC...AATTTTGAATCCTGGCCAAAAGAATTTGACTGGCCTCCTTCTCTGAGGCAGATT 47% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | GGACGAATGGATCACCTAGGAGCTGCTTTGCAGAATTTGGAGGACAGCATAGTTTGTGTCCTTGCCTATTaGTACGAACTACGAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: GRMDHLGAALQNLEDSIVCVLAY*YELRVH Trigger: GTGAACTCGTAGTTCGTACCAATAGGCAAGGACACA...AACTATGCTGTCCTCCAAATTCTGCAAAGCAGCTCCTAGGTGATCCATTCGTCC 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCCAGAATACACAGGACAATCTAAGTATTCAGTCCTTCCTTTCCGAGTTAGATCCTCAAAGATGTaGGGCTCCCCAAACAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: LPPEYTGQSKYSVLPFRVRSSKM*GSPNRS Trigger: GCTCCTGTTTGGGGAGCCCCACATCTTTGAGGATCT...AACTCGGAAAGGAAGGACTGAATACTTAGATTGTCCTGTGTATTCTGGAGGAAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGAGTAAATATACAGGTCCCAGTCAATATGAAATTACTGCCGGCTGCTCAAAAGACACAGAACTGGTaGCCACCATGGGAGAAGCCT | + |
|
Preference number: 4 (lower is better) Translates to: LRVNIQVPVNMKLLPAAQKTQNW*PPWEKP Trigger: AGGCTTCTCCCATGGTGGCCACCAGTTCTGTGTCTT...TTGAGCAGCCGGCAGTAATTTCATATTGACTGGGACCTGTATATTTACTCTGAG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGAGTAAATATACAGGTCCCAGTCAATATGAAATTACTGCCGGCTGCTCAATTCAAGGTCACCTTCTaGACACAGACCTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: LRVNIQVPVNMKLLPAAQFKVTF*TQTSSS Trigger: TGAGGAGGAGGTCTGTGTTCAGAAGGTGACCTTGAA...TTGAGCAGCCGGCAGTAATTTCATATTGACTGGGACCTGTATATTTACTCTGAG 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR TCA 90 bp | AATCTGCCTCAGAGAAGGAGGCCAGTCAAATTCTTTTGGCCAGGATTCAAAATTTTCAAGGTCACCTTCTaGACACAGACCTCCTCCTCA | + |
|
Preference number: 4 (lower is better) Translates to: NLPQRRRPVKFFWPGFKIFKVTF*TQTSSS Trigger: TGAGGAGGAGGTCTGTGTTCAGAAGGTGACCTTGAA...AATTTTGAATCCTGGCCAAAAGAATTTGACTGGCCTCCTTCTCTGAGGCAGATT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | TCAAATTCTTTTGGCCAGGATTCAAAATTGGTCTTTCTGGTGATGCTTCCACTGGCATCCTCTACTGCCTaGTCCACTAGCTCAATGCCA | + |
|
Preference number: 4 (lower is better) Translates to: SNSFGQDSKLVFLVMLPLASSTA*STSSMP Trigger: TGGCATTGAGCTAGTGGAGCAGGCAGTAGAGGATGC...CAGTGGAAGCATCACCAGAAAGACCAATTTTGAATCCTGGCCAAAAGAATTTGA 46% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | TCACCGAGTGGTCCACGCTTGTTGACACTGCTACGTGTACCTCTTCTTCCTTCTATATTTTTGTCTGCTTaGGTGCTTCTTAGCTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: SPSGPRLLTLLRVPLLPSIFLSA*VLLSYH Trigger: GTGATAGCTAAGAAGCACCCAAGCAGACAAAAATAT...AGAAGGAAGAAGAGGTACACGTAGCAGTGTCAACAAGCGTGGACCACTCGGTGA 46% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
||
| CDS-3UTR CCA 90 bp | ACACGTCTCAGCACAAGAACAGGCAGGTACCACTATGCCTTGTTATTATGTGCTCTTTGGATTGCCATCTaGGCTCCTGTACACAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: TRLSTRTGRYHYALLLCALWIAI*APVHRK Trigger: TTTTCTGTGTACAGGAGCCCAGATGGCAATCCAAAG...AGCACATAATAACAAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAGACGTGT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | CAGAGTAAATATACAGGTCCCAGTCAATATGAAATTACTGCCGGCTGCTCAAAAAGATCCTCAAAGATGTaGGGCTCCCCAAACAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: QSKYTGPSQYEITAGCSKRSSKM*GSPNRS Trigger: GCTCCTGTTTGGGGAGCCCCACATCTTTGAGGATCT...TTTTGAGCAGCCGGCAGTAATTTCATATTGACTGGGACCTGTATATTTACTCTG 46% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAAAGGATGGAGCAACACAAATTCAGGTTCAAGGAGTTAGGAGCAATCAAAAGATCCTCAAAGATGTaGGGCTCCCCAAACAGGAGC | + |
|
Preference number: 4 (lower is better) Translates to: SKRMEQHKFRFKELGAIKRSSKM*GSPNRS Trigger: GCTCCTGTTTGGGGAGCCCCACATCTTTGAGGATCT...TTTGATTGCTCCTAACTCCTTGAACCTGAATTTGTGTTGCTCCATCCTTTTGCT 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| 3UTR CAA 72 bp | GAGATAGGGTCTCTCATTAAACCACTATTAGCTAAATaGACTGTCCAGGAAAGCCCTCAGGATCCCACTGCA | + |
|
Preference number: 4 (lower is better) Translates to: EIGSLIKPLLAK*TVQESPQDPTA Trigger: TGCAGTGGGATCCTGAGGGCTTTCCTGGACAGTCAATTTAGCTAATAGTGGTTTAATGAGAGACCCTATCTC 46% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR TCA 90 bp | CCAACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAAGTCAACCTCAGTGGGATGTTTTTCAGATaGTTACATGGTAGACAGACG | + |
|
Preference number: 4 (lower is better) Translates to: PTLTKCRQKAYKFEVNLSGMFFR*LHGRQT Trigger: CGTCTGTCTACCATGTAATCATCTGAAAAACATCCC...ACTGAGGTTGACTTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGTTGG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR TCA 90 bp | CTCAGCACAAGAACAGGCAGGTACCACTATGCCTTGTTATTATGTGCTAGATCCGGGATGTTTTTCAGATaGTTACATGGTAGACAGACG | + |
|
Preference number: 4 (lower is better) Translates to: LSTRTGRYHYALLLCARSGMFFR*LHGRQT Trigger: CGTCTGTCTACCATGTAATCATCTGAAAAACATCCC...GGATCTAGCACATAATAACAAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAG 44% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | CCAATCTGCCTCAGAGAAGGAGGCCAGTCAAATTCTTTTGGCCAGGATTCAAAATCCCTTTATATGCTCTaGCCAATAAGGACTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PICLREGGQSNSFGQDSKSLYML*PIRTVT Trigger: TGTCACAGTCCTTATTGGGCAGAGCATATAAAGGGA...TTTTGAATCCTGGCCAAAAGAATTTGACTGGCCTCCTTCTCTGAGGCAGATTGG 44% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | CCAACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAAGTCAACCTCAGTTCCCTTTATATGCTCTaGCCAATAAGGACTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: PTLTKCRQKAYKFEVNLSSLYML*PIRTVT Trigger: TGTCACAGTCCTTATTGGGCAGAGCATATAAAGGGA...ACTGAGGTTGACTTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGTTGG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | AGGTACCACTATGCCTTGTTATTATGTGCTAGATCCAAATTCAGCTTCTTGTGTTCAGCCAGCCTCTCCTaGCAGGAGTCATCTCTACAA | + |
|
Preference number: 4 (lower is better) Translates to: RYHYALLLCARSKFSFLCSASLS*QESSLQ Trigger: TTGTAGAGATGACTCCTGGCAGGAGAGGCTGGCTGA...ACACAAGAAGCTGAATTTGGATCTAGCACATAATAACAAGGCATAGTGGTACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | AGCAAAAGGATGGAGCAACACAAATTCAGGTTCAAGGAGTTAGGAGCAATCAAACCACAGTCTTTGGATTaGCATCTGGGCTCCTGTACA | + |
|
Preference number: 4 (lower is better) Translates to: SKRMEQHKFRFKELGAIKPQSLD*HLGSCT Trigger: TGTACAGGAGCCCAGATGGCAATCCAAAGACTGTGG...TTTGATTGCTCCTAACTCCTTGAACCTGAATTTGTGTTGCTCCATCCTTTTGCT 44% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | AGGTACCACTATGCCTTGTTATTATGTGCTAGATCCAAATTCAGCTTCTTGTGTGTAGCCCACAGTCTTTaGATTGCCATCTGGGCTCCT | + |
|
Preference number: 4 (lower is better) Translates to: RYHYALLLCARSKFSFLCVAHSL*IAIWAP Trigger: AGGAGCCCAGATGGCAATCCAAAGACTGTGGGCTAC...ACACAAGAAGCTGAATTTGGATCTAGCACATAATAACAAGGCATAGTGGTACCT 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | CTTCCTCCAGAATACACAGGACAATCTAAGTATTCAGTCCTTCCTTTCCGAGTTACAAACACTAGAGTGTaGATGGTCCTGCAGTTCCGA | + |
|
Preference number: 4 (lower is better) Translates to: LPPEYTGQSKYSVLPFRVTNTRV*MVLQFR Trigger: TCGGAACTGCAGGACCATCCACACTCTAGTGTTTGT...AACTCGGAAAGGAAGGACTGAATACTTAGATTGTCCTGTGTATTCTGGAGGAAG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAAAGGATGGAGCAACACAAATTCAGGTTCAAGGAGTTAGGAGCAATCAAAAACCAGCTCACAGTGTaGGGTGTGGGGAAACAAATC | + |
|
Preference number: 4 (lower is better) Translates to: SKRMEQHKFRFKELGAIKNQLTV*GVGKQI Trigger: GATTTGTTTCCCCACACCCCACACTGTGAGCTGGTT...TTTGATTGCTCCTAACTCCTTGAACCTGAATTTGTGTTGCTCCATCCTTTTGCT 44% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 2 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 |
||
| 3UTR CAA 72 bp | CGTCTCAGCACAAGAACAGGCAGGTACCACTATGCCTaGTTATTATGTGCTAGATCCAAATTCAGCTTCTTG | + |
|
Preference number: 4 (lower is better) Translates to: RLSTRTGRYHYA*LLCARSKFSFL Trigger: CAAGAAGCTGAATTTGGATCTAGCACATAATAACAAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAGACG 44% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAGGATGGAGCAACACAAATTCAGGTTCAAGGAGTTAGGAGCAATCAAAGCCTTTGGATTGCCATCTaGGCTCCTGTACACAGAAAA | + |
|
Preference number: 4 (lower is better) Translates to: QKDGATQIQVQGVRSNQSLWIAI*APVHRK Trigger: TTTTCTGTGTACAGGAGCCCAGATGGCAATCCAAAG...GCTTTGATTGCTCCTAACTCCTTGAACCTGAATTTGTGTTGCTCCATCCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | CAAAAGGATGGAGCAACACAAATTCAGGTTCAAGGAGTTAGGAGCAATCAAAGCTGTGTCCTTGCCTATTaGTACGAACTACGAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: QKDGATQIQVQGVRSNQSCVLAY*YELRVH Trigger: GTGAACTCGTAGTTCGTACCAATAGGCAAGGACACA...GCTTTGATTGCTCCTAACTCCTTGAACCTGAATTTGTGTTGCTCCATCCTTTTG 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | ACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAAGTCAACCTCAGTTATTGTGTCCTTGCCTATTaGTACGAACTACGAGTTCAC | + |
|
Preference number: 4 (lower is better) Translates to: TLTKCRQKAYKFEVNLSYCVLAY*YELRVH Trigger: GTGAACTCGTAGTTCGTACCAATAGGCAAGGACACA...ATAACTGAGGTTGACTTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGT 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | CCAACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAAGTCAACCTCAGTCTGGAAGAAGGCATCTaGAGAAATTCGAATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: PTLTKCRQKAYKFEVNLSLEEGI*RNSNLQ Trigger: TTGAAGATTCGAATTTCTCCAGATGCCTTCTTCCAG...ACTGAGGTTGACTTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGTTGG 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | AGGTACCACTATGCCTTGTTATTATGTGCTAGATCCAAATTCAGCTTCTTGTGTAACCAGCTCACAGTGTaGGGTGTGGGGAAACAAATC | + |
|
Preference number: 4 (lower is better) Translates to: RYHYALLLCARSKFSFLCNQLTV*GVGKQI Trigger: GATTTGTTTCCCCACACCCCACACTGTGAGCTGGTT...ACACAAGAAGCTGAATTTGGATCTAGCACATAATAACAAGGCATAGTGGTACCT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 |
||
| CDS-3UTR TCA 90 bp | CAAAAGGATGGAGCAACACAAATTCAGGTTCAAGGAGTTAGGAGCAATCAAAGCCTTAATCCCTGGGGATaGAAAGTGACAATAGCCATT | + |
|
Preference number: 4 (lower is better) Translates to: QKDGATQIQVQGVRSNQSLNPWG*KVTIAI Trigger: AATGGCTATTGTCACTTTTCATCCCCAGGGATTAAG...GCTTTGATTGCTCCTAACTCCTTGAACCTGAATTTGTGTTGCTCCATCCTTTTG 42% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | AGGTACCACTATGCCTTGTTATTATGTGCTAGATCCAAATTCAGCTTCTTGTGTGGATCACCTAGGAGCTaGTTTGCAGAATTTGGAGGA | + |
|
Preference number: 4 (lower is better) Translates to: RYHYALLLCARSKFSFLCGSPRS*FAEFGG Trigger: TCCTCCAAATTCTGCAAAGCAGCTCCTAGGTGATCC...ACACAAGAAGCTGAATTTGGATCTAGCACATAATAACAAGGCATAGTGGTACCT 42% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 |
||
| CDS-3UTR CCA 90 bp | CTCAGCACAAGAACAGGCAGGTACCACTATGCCTTGTTATTATGTGCTAGATCCATATTTTTGTCTGCTTaGGTGCTTCTTAGCTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: LSTRTGRYHYALLLCARSIFLSA*VLLSYH Trigger: GTGATAGCTAAGAAGCACCCAAGCAGACAAAAATAT...GGATCTAGCACATAATAACAAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAG 42% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR TCA 90 bp | GCTAGATCCAAATTCAGCTTCTTGTGTGTATGTGCGATAAGCACTTTACCCAGTTGCCTTTGTTTCTTCTaGTATTTTTGTCTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: ARSKFSFLCVCAISTLPSCLCFF*YFCLLG Trigger: CCCAAGCAGACAAAAATATCAGAAGAAACAAAGGCA...ACTGGGTAAAGTGCTTATCGCACATACACACAAGAAGCTGAATTTGGATCTAGC 41% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR TCA 90 bp | AATCTGCCTCAGAGAAGGAGGCCAGTCAAATTCTTTTGGCCAGGATTCAAAATTTGCCTTTGTTTCTTCTaGTATTTTTGTCTGCTTGGG | + |
|
Preference number: 4 (lower is better) Translates to: NLPQRRRPVKFFWPGFKICLCFF*YFCLLG Trigger: CCCAAGCAGACAAAAATATCAGAAGAAACAAAGGCA...AATTTTGAATCCTGGCCAAAAGAATTTGACTGGCCTCCTTCTCTGAGGCAGATT 41% GC, longest homopolymer 5 nt, total homopolymer stretches 13 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | CAGAGTAAATATACAGGTCCCAGTCAATATGAAATTACTGCCGGCTGCTCAAAATTTCACCTTGAGTTGTaGTTCATAACTCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: QSKYTGPSQYEITAGCSKFHLEL*FITQPP Trigger: TGGAGGCTGAGTTATGAAGCACAACTCAAGGTGAAA...TTTTGAGCAGCCGGCAGTAATTTCATATTGACTGGGACCTGTATATTTACTCTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | AGGTACCACTATGCCTTGTTATTATGTGCTAGATCCAAATTCAGCTTCTTGTGTTTTCACCATGGGGCTTaGAGGAAACAAACACTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: RYHYALLLCARSKFSFLCFHHGA*RKQTLE Trigger: CTCTAGTGTTTGTTTCCTGCAAGCCCCATGGTGAAA...ACACAAGAAGCTGAATTTGGATCTAGCACATAATAACAAGGCATAGTGGTACCT 41% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 2 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 |
||
| CDS-3UTR GCA 90 bp | CAGAATACACAGGACAATCTAAGTATTCAGTCCTTCCTTTCCGAGTTTTTAACCTTTCACCATGGGGCTTaGAGGAAACAAACACTAGAG | + |
|
Preference number: 4 (lower is better) Translates to: QNTQDNLSIQSFLSEFLTFHHGA*RKQTLE Trigger: CTCTAGTGTTTGTTTCCTGCAAGCCCCATGGTGAAA...GGTTAAAAACTCGGAAAGGAAGGACTGAATACTTAGATTGTCCTGTGTATTCTG 41% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 2 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 |
||
| CDS-3UTR GCA 90 bp | CAGAATACACAGGACAATCTAAGTATTCAGTCCTTCCTTTCCGAGTTTTTAACCTCCCTTTATATGCTCTaGCCAATAAGGACTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: QNTQDNLSIQSFLSEFLTSLYML*PIRTVT Trigger: TGTCACAGTCCTTATTGGGCAGAGCATATAAAGGGA...GGTTAAAAACTCGGAAAGGAAGGACTGAATACTTAGATTGTCCTGTGTATTCTG 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | AGGTACCACTATGCCTTGTTATTATGTGCTAGATCCAAATTCAGCTTCTTGTGTTTTCACCTTGAGTTGTaGTTCATAACTCAGCCTCCA | + |
|
Preference number: 4 (lower is better) Translates to: RYHYALLLCARSKFSFLCFHLEL*FITQPP Trigger: TGGAGGCTGAGTTATGAAGCACAACTCAAGGTGAAA...ACACAAGAAGCTGAATTTGGATCTAGCACATAATAACAAGGCATAGTGGTACCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | GCTAGATCCAAATTCAGCTTCTTGTGTGTATGTGCGATAAGCACTTTACCCAGTATATTTTTGTCTGCTTaGGTGCTTCTTAGCTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: ARSKFSFLCVCAISTLPSIFLSA*VLLSYH Trigger: GTGATAGCTAAGAAGCACCCAAGCAGACAAAAATAT...ACTGGGTAAAGTGCTTATCGCACATACACACAAGAAGCTGAATTTGGATCTAGC 40% GC, longest homopolymer 5 nt, total homopolymer stretches 5 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | AGCAAAAGGATGGAGCAACACAAATTCAGGTTCAAGGAGTTAGGAGCAATCAAACTGGAAGAAGGCATCTaGAGAAATTCGAATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SKRMEQHKFRFKELGAIKLEEGI*RNSNLQ Trigger: TTGAAGATTCGAATTTCTCCAGATGCCTTCTTCCAG...TTTGATTGCTCCTAACTCCTTGAACCTGAATTTGTGTTGCTCCATCCTTTTGCT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CCA 90 bp | TCAAATTCTTTTGGCCAGGATTCAAAATTGGTCTTTCTGGTGATGCTTCCACTGCTGGAAGAAGGCATCTaGAGAAATTCGAATCTTCAA | + |
|
Preference number: 4 (lower is better) Translates to: SNSFGQDSKLVFLVMLPLLEEGI*RNSNLQ Trigger: TTGAAGATTCGAATTTCTCCAGATGCCTTCTTCCAG...CAGTGGAAGCATCACCAGAAAGACCAATTTTGAATCCTGGCCAAAAGAATTTGA 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR GCA 90 bp | AAGAGCAGTAATATCTTTCCCGGTTATAATCATCAGAAATTAACCCAGATCAACTCCCTTTATATGCTCTaGCCAATAAGGACTGTGACA | + |
|
Preference number: 4 (lower is better) Translates to: KSSNIFPGYNHQKLTQINSLYML*PIRTVT Trigger: TGTCACAGTCCTTATTGGGCAGAGCATATAAAGGGA...GTTGATCTGGGTTAATTTCTGATGATTATAACCGGGAAAGATATTACTGCTCTT 38% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
||
| CDS-3UTR CCA 90 bp | GAGAAGCAGTCTTCTTTAAGAGCATTTAGGACTGAGAAAAATTTAAACTTCCTGATATTTTTGTCTGCTTaGGTGCTTCTTAGCTATCAC | + |
|
Preference number: 4 (lower is better) Translates to: EKQSSLRAFRTEKNLNFLIFLSA*VLLSYH Trigger: GTGATAGCTAAGAAGCACCCAAGCAGACAAAAATAT...CAGGAAGTTTAAATTTTTCTCAGTCCTAAATGCTCTTAAAGAAGACTGCTTCTC 36% GC, longest homopolymer 5 nt, total homopolymer stretches 10 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | AGCCCTCAGGATCCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCAAGTAGCCCACAGTCTTaGGATTGCCATCTGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: SPQDPTAYTSQHKNRQVPSSPQS*DCHLGS Trigger: GGAGCCCAGATGGCAATCCAAAGACTGTGGGCTACT...TGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGGATCCTGAGGGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | GTGTGCCTGCGCTGCGCTGAAGCAGTCAGCCTTCTTTATGGTCACCGAGTGGTCGGTGGTAGGCTTGAGTaGTGCTTCATAACTCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: VCLRCAEAVSLLYGHRVVGGRLE*CFITQP Trigger: AGGCTGAGTTATGAAGCACAACTCAAGCCTACCACC...GACCACTCGGTGACCATAAAGAAGGCTGACTGCTTCAGCGCAGCGCAGGCACAC 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
||
| CDS-3UTR CAA 90 bp | GATCCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCACTATGCCTTCCCACAGTCTTTGGATaGCCATCTGGGCTCCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: DPTAYTSQHKNRQVPLCLPTVFG*PSGLLY Trigger: GTACAGGAGCCCAGATGGCAATCCAAAGACTGTGGG...AAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGGATC 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | CCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCACTATGCCTTGTTCCCACAGTCTTTGGATaGCCATCTGGGCTCCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: PTAYTSQHKNRQVPLCLVPTVFG*PSGLLY Trigger: GTACAGGAGCCCAGATGGCAATCCAAAGACTGTGGG...AACAAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGG 53% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS TCA 90 bp | GGAGACAGCGGAGCCCCTCAGACTGATGTGCAGCCACTGTGTCACTaGCTCCATGGAGCACTTTTAGGTGAGACTCTAGGCTTTGTAAAA | + |
|
Preference number: 5 (lower is better) Translates to: GDSGAPQTDVQPLCH*LHGALLGETLGFVK Trigger: TTTTACAAAGCCTAGAGTCTCACCTAAAAGTGCTCCATGGAGTCAGTGACACAGTGGCTGCACATCAGTCTGAGGGGCTCCGCTGTCTCC 52% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | AGTGGTCCACGCTTGTTGACACTGCTACGTGTACCTCTTCTTCCTTCTCCATCACCCACAGTCTTTGGATaGCCATCTGGGCTCCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: SGPRLLTLLRVPLLPSPSPTVFG*PSGLLY Trigger: GTACAGGAGCCCAGATGGCAATCCAAAGACTGTGGG...TGATGGAGAAGGAAGAAGAGGTACACGTAGCAGTGTCAACAAGCGTGGACCACT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
||
| CDS-3UTR CAA 90 bp | AAGCCCTCAGGATCCCACTGCATACACGTCTCAGCACAAGAACAGGCAGGTACCAGCCATTGTGTGTCCTaGCCTATTGGTACGAACTAC | + |
|
Preference number: 5 (lower is better) Translates to: KPSGSHCIHVSAQEQAGTSHCVS*PIGTNY Trigger: GTAGTTCGTACCAATAGGCAAGGACACACAATGGCT...GGTACCTGCCTGTTCTTGTGCTGAGACGTGTATGCAGTGGGATCCTGAGGGCTT 52% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS TCA 90 bp | TGTGACTTTAACAGCTGTGGCAAAATCGTCTCTGCTCTGCCAGCGTaGAACTCACAGTTGGTGACACCATTGAAGGCTGCAGTCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: CDFNSCGKIVSALPA*NSQLVTPLKAAVHL Trigger: CAGGTGGACTGCAGCCTTCAATGGTGTCACCAACTGTGAGTTTCACGCTGGCAGAGCAGAGACGATTTTGCCACAGCTGTTAAAGTCACA 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | AATCATCAGAAATTAACCCAGATCAACCTTGTGTGCCTGCGCTGCGCTGAAGCAAGTAGCCCACAGTCTTaGGATTGCCATCTGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NHQKLTQINLVCLRCAEASSPQS*DCHLGS Trigger: GGAGCCCAGATGGCAATCCAAAGACTGTGGGCTACT...TGCTTCAGCGCAGCGCAGGCACACAAGGTTGATCTGGGTTAATTTCTGATGATT 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
||
| CDS-3UTR CAA 90 bp | CTCAGCACAAGAACAGGCAGGTACCACTATGCCTTGTTATTATGTGCTAGATCCCAGTTGGTGACACCATaGAAGGCTGCAGTCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: LSTRTGRYHYALLLCARSQLVTP*KAAVHL Trigger: CAGGTGGACTGCAGCCTTCAATGGTGTCACCAACTG...GGATCTAGCACATAATAACAAGGCATAGTGGTACCTGCCTGTTCTTGTGCTGAG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | CCAACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAAGTCAACCTCAGTCAGTTGGTGACACCATaGAAGGCTGCAGTCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: PTLTKCRQKAYKFEVNLSQLVTP*KAAVHL Trigger: CAGGTGGACTGCAGCCTTCAATGGTGTCACCAACTG...ACTGAGGTTGACTTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGTTGG 50% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | GCTAGATCCAAATTCAGCTTCTTGTGTGTATGTGCGATAAGCACTTTACCCAGTCCCACAGTCTTTGGATaGCCATCTGGGCTCCTGTAC | + |
|
Preference number: 5 (lower is better) Translates to: ARSKFSFLCVCAISTLPSPTVFG*PSGLLY Trigger: GTACAGGAGCCCAGATGGCAATCCAAAGACTGTGGG...ACTGGGTAAAGTGCTTATCGCACATACACACAAGAAGCTGAATTTGGATCTAGC 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | CTCAGAGTAAATATACAGGTCCCAGTCAATATGAAATTACTGCCGGCTGCTCAAAGTAGCCCACAGTCTTaGGATTGCCATCTGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: LRVNIQVPVNMKLLPAAQSSPQS*DCHLGS Trigger: GGAGCCCAGATGGCAATCCAAAGACTGTGGGCTACT...TTGAGCAGCCGGCAGTAATTTCATATTGACTGGGACCTGTATATTTACTCTGAG 48% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | AATCTGCCTCAGAGAAGGAGGCCAGTCAAATTCTTTTGGCCAGGATTCAAAATTAGTAGCCCACAGTCTTaGGATTGCCATCTGGGCTCC | + |
|
Preference number: 5 (lower is better) Translates to: NLPQRRRPVKFFWPGFKISSPQS*DCHLGS Trigger: GGAGCCCAGATGGCAATCCAAAGACTGTGGGCTACT...AATTTTGAATCCTGGCCAAAAGAATTTGACTGGCCTCCTTCTCTGAGGCAGATT 48% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | CCAATCTGCCTCAGAGAAGGAGGCCAGTCAAATTCTTTTGGCCAGGATTCAAAAAGCCATTGTGTGTCCTaGCCTATTGGTACGAACTAC | + |
|
Preference number: 5 (lower is better) Translates to: PICLREGGQSNSFGQDSKSHCVS*PIGTNY Trigger: GTAGTTCGTACCAATAGGCAAGGACACACAATGGCT...TTTTGAATCCTGGCCAAAAGAATTTGACTGGCCTCCTTCTCTGAGGCAGATTGG 47% GC, longest homopolymer 5 nt, total homopolymer stretches 9 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGTAAATATACAGGTCCCAGTCAATATGAAATTACTGCCGGCTGCTCAAAACAGTTGGTGACACCATaGAAGGCTGCAGTCCACCTG | + |
|
Preference number: 5 (lower is better) Translates to: QSKYTGPSQYEITAGCSKQLVTP*KAAVHL Trigger: CAGGTGGACTGCAGCCTTCAATGGTGTCACCAACTG...TTTTGAGCAGCCGGCAGTAATTTCATATTGACTGGGACCTGTATATTTACTCTG 47% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | CTTCCTCCAGAATACACAGGACAATCTAAGTATTCAGTCCTTCCTTTCCGAGTTCACCTAGGAGCTGCTTaGCAGAATTTGGAGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: LPPEYTGQSKYSVLPFRVHLGAA*QNLEDS Trigger: GCTGTCCTCCAAATTCTGCAAAGCAGCTCCTAGGTG...AACTCGGAAAGGAAGGACTGAATACTTAGATTGTCCTGTGTATTCTGGAGGAAG 47% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 |
||
| CDS-3UTR CAA 90 bp | GGGGTGTGGGGAAACAAATCCACAGGTACAGCTTCTCTCAGGACGAATGGATCATTTCTTCTGATATTTTaGTCTGCTTGGGTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: GVWGNKSTGTASLRTNGSFLLIF*SAWVLL Trigger: AAGAAGCACCCAAGCAGACAAAAATATCAGAAGAAA...TGATCCATTCGTCCTGAGAGAAGCTGTACCTGTGGATTTGTTTCCCCACACCCC 46% GC, longest homopolymer 4 nt, total homopolymer stretches 12 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | CAGAGTAAATATACAGGTCCCAGTCAATATGAAATTACTGCCGGCTGCTCAAAACACCTAGGAGCTGCTTaGCAGAATTTGGAGGACAGC | + |
|
Preference number: 5 (lower is better) Translates to: QSKYTGPSQYEITAGCSKHLGAA*QNLEDS Trigger: GCTGTCCTCCAAATTCTGCAAAGCAGCTCCTAGGTG...TTTTGAGCAGCCGGCAGTAATTTCATATTGACTGGGACCTGTATATTTACTCTG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 2 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 |
||
| CDS-3UTR CAA 90 bp | AATCATCAGAAATTAACCCAGATCAACCTTGTGTGCCTGCGCTGCGCTGAAGCATTTCTTCTGATATTTTaGTCTGCTTGGGTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: NHQKLTQINLVCLRCAEAFLLIF*SAWVLL Trigger: AAGAAGCACCCAAGCAGACAAAAATATCAGAAGAAA...TGCTTCAGCGCAGCGCAGGCACACAAGGTTGATCTGGGTTAATTTCTGATGATT 43% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000087540.4 |
||
| CDS-3UTR CAA 90 bp | TCAAATTCTTTTGGCCAGGATTCAAAATTGGTCTTTCTGGTGATGCTTCCACTGAGCCATTGTGTGTCCTaGCCTATTGGTACGAACTAC | + |
|
Preference number: 5 (lower is better) Translates to: SNSFGQDSKLVFLVMLPLSHCVS*PIGTNY Trigger: GTAGTTCGTACCAATAGGCAAGGACACACAATGGCT...CAGTGGAAGCATCACCAGAAAGACCAATTTTGAATCCTGGCCAAAAGAATTTGA 43% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | GCTAGATCCAAATTCAGCTTCTTGTGTGTATGTGCGATAAGCACTTTACCCAGTGCTGCTTTGCAGAATTaGGAGGACAGCATAGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: ARSKFSFLCVCAISTLPSAALQN*EDSIVQ Trigger: TTGAACTATGCTGTCCTCCAAATTCTGCAAAGCAGC...ACTGGGTAAAGTGCTTATCGCACATACACACAAGAAGCTGAATTTGGATCTAGC 43% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 |
||
| CDS-3UTR CAA 90 bp | CAAAAGGATGGAGCAACACAAATTCAGGTTCAAGGAGTTAGGAGCAATCAAAGCAAATTTCACCTTGAGTaGTGCTTCATAACTCAGCCT | + |
|
Preference number: 5 (lower is better) Translates to: QKDGATQIQVQGVRSNQSKFHLE*CFITQP Trigger: AGGCTGAGTTATGAAGCACAACTCAAGGTGAAATTT...GCTTTGATTGCTCCTAACTCCTTGAACCTGAATTTGTGTTGCTCCATCCTTTTG 41% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | AGGTACCACTATGCCTTGTTATTATGTGCTAGATCCAAATTCAGCTTCTTGTGTGCTGCTTTGCAGAATTaGGAGGACAGCATAGTTCAA | + |
|
Preference number: 5 (lower is better) Translates to: RYHYALLLCARSKFSFLCAALQN*EDSIVQ Trigger: TTGAACTATGCTGTCCTCCAAATTCTGCAAAGCAGC...ACACAAGAAGCTGAATTTGGATCTAGCACATAATAACAAGGCATAGTGGTACCT 41% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 2 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 |
||
| CDS-3UTR CAA 90 bp | ACACTCACAAAGTGTAGGCAGAAGGCTTACAAGTTCGAAGTCAACCTCAGTTATTTTCTTCTGATATTTTaGTCTGCTTGGGTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: TLTKCRQKAYKFEVNLSYFLLIF*SAWVLL Trigger: AAGAAGCACCCAAGCAGACAAAAATATCAGAAGAAA...ATAACTGAGGTTGACTTCGAACTTGTAAGCCTTCTGCCTACACTTTGTGAGTGT 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS-3UTR CAA 90 bp | GCTAGATCCAAATTCAGCTTCTTGTGTGTATGTGCGATAAGCACTTTACCCAGTTTTCTTCTGATATTTTaGTCTGCTTGGGTGCTTCTT | + |
|
Preference number: 5 (lower is better) Translates to: ARSKFSFLCVCAISTLPSFLLIF*SAWVLL Trigger: AAGAAGCACCCAAGCAGACAAAAATATCAGAAGAAA...ACTGGGTAAAGTGCTTATCGCACATACACACAAGAAGCTGAATTTGGATCTAGC 40% GC, longest homopolymer 4 nt, total homopolymer stretches 8 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS GCA 72 bp | AGGCACGCTGAGCCACAGAGAGGCCAATCACACCCGTaGCACAGCAAATGTCTAGGAGGAGGCTCTCAGAGT | + |
|
Preference number: 6 (lower is better) Translates to: RHAEPQRGQSHP*HSKCLGGGSQS Trigger: ACTCTGAGAGCCTCCTCCTAGACATTTGCTGTGGCACGGGTGTGATTGGCCTCTCTGTGGCTCAGCGTGCCT 58% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS CCA 72 bp | ACAGAACTGGTGGCCACCATGGGAGAAGCCTACACATaGGGAACAGCCAAGGTGTCCTCCGTCCTTACGCAA | + |
|
Preference number: 6 (lower is better) Translates to: TELVATMGEAYT*GTAKVSSVLTQ Trigger: TTGCGTAAGGACGGAGGACACCTTGGCTGTTCCCCATGTGTAGGCTTCTCCCATGGTGGCCACCAGTTCTGT 57% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
||
| CDS GCA 72 bp | AGCGTGAAACTCACAGTTGGTGACACCATTGAAGGCTaGAGTCCACCTGGCATCCTCTACTGCCTGCTCCAC | + |
|
Preference number: 6 (lower is better) Translates to: SVKLTVGDTIEG*SPPGILYCLLH Trigger: GTGGAGCAGGCAGTAGAGGATGCCAGGTGGACTGCAGCCTTCAATGGTGTCACCAACTGTGAGTTTCACGCT 56% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 3 transcripts: ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
||
| CDS GCA 72 bp | CTCCAGAGTGGAGTCACAACATCAGCCAGCCTCTCCTaGCAGGAGTCATCTCTACAATGCCTTTGTTTCTTC | + |
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Preference number: 6 (lower is better) Translates to: LQSGVTTSASLS*QESSLQCLCFF Trigger: GAAGAAACAAAGGCATTGTAGAGATGACTCCTGGCAGGAGAGGCTGGCTGATGTTGTGACTCCACTCTGGAG 51% GC, longest homopolymer 3 nt, total homopolymer stretches 0 nt. Matches the following 4 transcripts: ENSMUST00000087540.4 ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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| CDS CCA 72 bp | ACTATGGGAATAAAGACACAGAACTGGTGGCCACCATaGGAGAAGCCTACACATGGGGAACAGCCAAGGTGT | + |
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Preference number: 6 (lower is better) Translates to: TMGIKTQNWWPP*EKPTHGEQPRC Trigger: ACACCTTGGCTGTTCCCCATGTGTAGGCTTCTCCCATGGTGGCCACCAGTTCTGTGTCTTTATTCCCATAGT 51% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 1 transcripts: ENSMUST00000128115.8 |
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| CDS CAA 90 bp | CTGCCAGGAGTCATCTCTACAATGCCTTTGTTTCTTCTGATATTTTaGTCTGCTTGGGTGCTTCTTAGCTATCACGCTGGTGAAACTCCC | + |
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Preference number: 6 (lower is better) Translates to: LPGVISTMPLFLLIF*SAWVLLSYHAGETP Trigger: GGGAGTTTCACCAGCGTGATAGCTAAGAAGCACCCAAGCAGACAAAAATATCAGAAGAAACAAAGGCATTGTAGAGATGACTCCTGGCAG 46% GC, longest homopolymer 4 nt, total homopolymer stretches 4 nt. Matches the following 4 transcripts: ENSMUST00000087540.4 ENSMUST00000087541.12 ENSMUST00000113252.8 ENSMUST00000128115.8 |
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